Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065209.t1 | KEH20135.1 | 89 | 960 | 106 | 0 | 1 | 960 | 26 | 985 | 0.00E+00 | 1269.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065209.t1 | F4IJK1 | 41.3 | 993 | 479 | 18 | 1 | 963 | 26 | 944 | 1.2e-92 | 342.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065209.t1 | A0A072U2T5 | 89.0 | 960 | 106 | 0 | 1 | 960 | 26 | 985 | 0.0e+00 | 1269.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051279 | MS.gene065209 | 0.813622 | 2.33E-51 | -1.69E-46 |
| MS.gene052584 | MS.gene065209 | 0.804759 | 1.85E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene065209 | 0.808749 | 2.66E-50 | -1.69E-46 |
| MS.gene05686 | MS.gene065209 | 0.80282 | 4.68E-49 | -1.69E-46 |
| MS.gene059276 | MS.gene065209 | 0.838374 | 2.99E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene020439 | MS.gene065209 | PPI |
| MS.gene065209 | MS.gene010090 | PPI |
| MS.gene065209 | MS.gene21314 | PPI |
| MS.gene065209 | MS.gene013085 | PPI |
| MS.gene065209 | MS.gene37922 | PPI |
| MS.gene049982 | MS.gene065209 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065209.t1 | MTR_8g471130 | 95.734 | 961 | 41 | 0 | 1 | 961 | 26 | 986 | 0.0 | 1859 |
| MS.gene065209.t1 | MTR_5g032060 | 52.247 | 1135 | 352 | 22 | 1 | 961 | 26 | 1144 | 0.0 | 989 |
| MS.gene065209.t1 | MTR_3g100190 | 37.193 | 1019 | 486 | 27 | 5 | 962 | 27 | 952 | 7.36e-177 | 539 |
| MS.gene065209.t1 | MTR_5g066340 | 45.475 | 453 | 233 | 6 | 1 | 445 | 26 | 472 | 4.15e-108 | 358 |
| MS.gene065209.t1 | MTR_1g071540 | 49.505 | 101 | 45 | 1 | 1 | 95 | 31 | 131 | 3.43e-25 | 114 |
| MS.gene065209.t1 | MTR_1g103160 | 46.729 | 107 | 54 | 1 | 1 | 104 | 26 | 132 | 6.31e-25 | 112 |
| MS.gene065209.t1 | MTR_1g103160 | 46.729 | 107 | 54 | 1 | 1 | 104 | 29 | 135 | 6.54e-25 | 112 |
| MS.gene065209.t1 | MTR_5g006520 | 51.613 | 93 | 45 | 0 | 3 | 95 | 31 | 123 | 6.17e-24 | 109 |
| MS.gene065209.t1 | MTR_5g006520 | 51.613 | 93 | 45 | 0 | 3 | 95 | 31 | 123 | 6.40e-24 | 109 |
| MS.gene065209.t1 | MTR_7g095410 | 44.248 | 113 | 52 | 1 | 1 | 113 | 29 | 130 | 1.74e-23 | 108 |
| MS.gene065209.t1 | MTR_7g095410 | 44.248 | 113 | 52 | 1 | 1 | 113 | 29 | 130 | 1.83e-23 | 108 |
| MS.gene065209.t1 | MTR_1g103160 | 47.000 | 100 | 50 | 1 | 8 | 104 | 1 | 100 | 8.66e-23 | 105 |
| MS.gene065209.t1 | MTR_6g016950 | 81.481 | 54 | 10 | 0 | 738 | 791 | 7 | 60 | 5.87e-22 | 90.5 |
| MS.gene065209.t1 | MTR_7g095410 | 44.340 | 106 | 48 | 1 | 8 | 113 | 1 | 95 | 2.57e-21 | 101 |
| MS.gene065209.t1 | MTR_5g075490 | 45.192 | 104 | 47 | 3 | 3 | 106 | 39 | 132 | 6.52e-20 | 95.5 |
| MS.gene065209.t1 | MTR_3g467610 | 47.312 | 93 | 44 | 2 | 8 | 98 | 15 | 104 | 7.65e-18 | 88.6 |
| MS.gene065209.t1 | MTR_7g108070 | 47.297 | 74 | 39 | 0 | 1 | 74 | 28 | 101 | 5.87e-17 | 83.2 |
| MS.gene065209.t1 | MTR_1g088965 | 37.778 | 90 | 52 | 1 | 1 | 86 | 32 | 121 | 3.33e-13 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065209.t1 | AT5G10500 | 44.989 | 449 | 215 | 7 | 1 | 444 | 26 | 447 | 4.74e-108 | 355 |
| MS.gene065209.t1 | AT5G10500 | 37.717 | 403 | 200 | 9 | 564 | 954 | 470 | 833 | 7.58e-57 | 211 |
| MS.gene065209.t1 | AT1G58215 | 42.137 | 496 | 217 | 11 | 1 | 466 | 26 | 481 | 4.22e-105 | 349 |
| MS.gene065209.t1 | AT1G58215 | 41.989 | 362 | 163 | 7 | 641 | 955 | 561 | 922 | 6.05e-68 | 246 |
| MS.gene065209.t1 | AT2G22560 | 54.573 | 328 | 125 | 7 | 641 | 963 | 636 | 944 | 5.51e-96 | 324 |
| MS.gene065209.t1 | AT1G09720 | 41.907 | 451 | 225 | 7 | 1 | 443 | 26 | 447 | 1.99e-93 | 317 |
| MS.gene065209.t1 | AT1G09720 | 39.494 | 395 | 176 | 12 | 619 | 955 | 512 | 901 | 3.44e-66 | 240 |
| MS.gene065209.t1 | AT3G22790 | 28.834 | 489 | 254 | 17 | 1 | 442 | 28 | 469 | 4.27e-33 | 139 |
| MS.gene065209.t1 | AT3G22790 | 28.834 | 489 | 254 | 17 | 1 | 442 | 28 | 469 | 4.27e-33 | 139 |
| MS.gene065209.t1 | AT3G22790 | 28.834 | 489 | 254 | 17 | 1 | 442 | 28 | 469 | 4.27e-33 | 139 |
| MS.gene065209.t1 | AT4G14760 | 28.243 | 478 | 270 | 19 | 1 | 442 | 28 | 468 | 3.27e-26 | 117 |
| MS.gene065209.t1 | AT4G14760 | 28.243 | 478 | 270 | 19 | 1 | 442 | 28 | 468 | 3.27e-26 | 117 |
| MS.gene065209.t1 | AT4G14760 | 28.243 | 478 | 270 | 19 | 1 | 442 | 28 | 468 | 3.27e-26 | 117 |
| MS.gene065209.t1 | AT4G14760 | 28.243 | 478 | 270 | 19 | 1 | 442 | 28 | 468 | 3.27e-26 | 117 |
| MS.gene065209.t1 | AT1G03080 | 29.831 | 295 | 161 | 9 | 1 | 264 | 28 | 307 | 4.64e-24 | 110 |
| MS.gene065209.t1 | AT1G03080 | 29.831 | 295 | 161 | 9 | 1 | 264 | 28 | 307 | 4.64e-24 | 110 |
| MS.gene065209.t1 | AT1G03080 | 29.831 | 295 | 161 | 9 | 1 | 264 | 28 | 307 | 4.64e-24 | 110 |
| MS.gene065209.t1 | AT4G02710 | 41.818 | 110 | 59 | 1 | 1 | 110 | 29 | 133 | 6.61e-23 | 106 |
| MS.gene065209.t1 | AT2G30500 | 54.930 | 71 | 31 | 1 | 1 | 71 | 37 | 106 | 2.34e-17 | 87.0 |
| MS.gene065209.t1 | AT2G30500 | 54.930 | 71 | 31 | 1 | 1 | 71 | 37 | 106 | 2.34e-17 | 87.0 |
| MS.gene065209.t1 | AT2G30500 | 54.930 | 71 | 31 | 1 | 1 | 71 | 36 | 105 | 2.63e-17 | 86.7 |
| MS.gene065209.t1 | AT2G47920 | 40.404 | 99 | 52 | 1 | 1 | 92 | 25 | 123 | 1.10e-15 | 77.8 |
| MS.gene065209.t1 | AT2G47920 | 40.404 | 99 | 52 | 1 | 1 | 92 | 25 | 123 | 1.10e-15 | 77.8 |
| MS.gene065209.t1 | AT5G58320 | 50.725 | 69 | 34 | 0 | 1 | 69 | 37 | 105 | 2.68e-15 | 80.5 |
| MS.gene065209.t1 | AT5G58320 | 50.725 | 69 | 34 | 0 | 1 | 69 | 37 | 105 | 2.68e-15 | 80.5 |
| MS.gene065209.t1 | AT5G58320 | 50.725 | 69 | 34 | 0 | 1 | 69 | 37 | 105 | 2.83e-15 | 80.5 |
| MS.gene065209.t1 | AT5G58320 | 50.725 | 69 | 34 | 0 | 1 | 69 | 37 | 105 | 2.83e-15 | 80.5 |
| MS.gene065209.t1 | AT1G03470 | 54.098 | 61 | 28 | 0 | 1 | 61 | 23 | 83 | 3.33e-15 | 77.4 |
| MS.gene065209.t1 | AT1G03470 | 54.098 | 61 | 28 | 0 | 1 | 61 | 23 | 83 | 3.33e-15 | 77.4 |
| MS.gene065209.t1 | AT1G03470 | 54.098 | 61 | 28 | 0 | 1 | 61 | 23 | 83 | 3.33e-15 | 77.4 |
| MS.gene065209.t1 | AT1G03470 | 54.098 | 61 | 28 | 0 | 1 | 61 | 23 | 83 | 3.33e-15 | 77.4 |
| MS.gene065209.t1 | AT5G58320 | 51.613 | 62 | 30 | 0 | 8 | 69 | 1 | 62 | 1.16e-13 | 75.1 |
Find 131 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCATCATTCAATAAGATTT+TGG | 0.160648 | 8.1:-36341101 | None:intergenic |
| TTTCTATTCAATCCTGATTT+AGG | 0.182892 | 8.1:-36339900 | None:intergenic |
| CCTTACTTCCCTTACTCTTT+TGG | 0.192513 | 8.1:-36340228 | None:intergenic |
| ACGCTGTTGTTATCTCTTCT+TGG | 0.211296 | 8.1:-36342005 | None:intergenic |
| TCCATATAAGGAACTCTATC+TGG | 0.211327 | 8.1:-36339699 | None:intergenic |
| CCTCGTTCGGTATCACCTTT+TGG | 0.225729 | 8.1:-36340982 | None:intergenic |
| ATAATTCCATTGCTAGATAT+TGG | 0.234388 | 8.1:+36340006 | MS.gene065209:CDS |
| AATCCTGATTTAGGAGCTTT+AGG | 0.247722 | 8.1:-36339891 | None:intergenic |
| ACCGAGTTCGTCTTGCAAAT+TGG | 0.261286 | 8.1:-36340069 | None:intergenic |
| CCTCGTCTGGTATCACCTTT+TGG | 0.262190 | 8.1:-36340775 | None:intergenic |
| AATCTTTGAGTGGAGTCTTT+GGG | 0.266985 | 8.1:-36339797 | None:intergenic |
| TCAACAGCAGAAGTTGATTC+TGG | 0.268774 | 8.1:-36341670 | None:intergenic |
| CCTCTAAGGTCATTTATCTT+TGG | 0.277004 | 8.1:+36342273 | MS.gene065209:CDS |
| TTTACATCTCGTTTCGGCCT+CGG | 0.284477 | 8.1:-36340308 | None:intergenic |
| CAATGAATCAATGGCTGTAT+TGG | 0.296714 | 8.1:-36340948 | None:intergenic |
| AAATCTTTGAGTGGAGTCTT+TGG | 0.299554 | 8.1:-36339798 | None:intergenic |
| GCAAACGTGACAATGCTTCT+TGG | 0.304395 | 8.1:-36340163 | None:intergenic |
| CTGCTGTTGAAGAGAAGTTT+AGG | 0.318730 | 8.1:+36341683 | MS.gene065209:CDS |
| ACGTTTGGTTTCAATCCTTC+TGG | 0.318970 | 8.1:-36339765 | None:intergenic |
| AGTGGAGTCTTTGGGGCTTT+CGG | 0.327023 | 8.1:-36339789 | None:intergenic |
| CCCAGATAGAGTTCCTTATA+TGG | 0.329251 | 8.1:+36339698 | MS.gene065209:CDS |
| CAATGCGGCCATTTATTCAT+TGG | 0.333261 | 8.1:+36341132 | MS.gene065209:CDS |
| TAGAGGAGAATCTAGAATTC+TGG | 0.350291 | 8.1:+36341725 | MS.gene065209:CDS |
| CAATACAGCCATTGATTCAT+TGG | 0.351034 | 8.1:+36340949 | MS.gene065209:CDS |
| TAATTCCATTGCTAGATATT+GGG | 0.353589 | 8.1:+36340007 | MS.gene065209:CDS |
| TCTCTTTCTTTCAACACTAT+AGG | 0.361479 | 8.1:-36341220 | None:intergenic |
| TCGTCGTCCTCATCCATATA+AGG | 0.365262 | 8.1:-36339711 | None:intergenic |
| TGTGATTTAACATCATGTTT+TGG | 0.365811 | 8.1:-36340875 | None:intergenic |
| GTCACGTTTGCAAGAGAAAC+AGG | 0.366657 | 8.1:+36340175 | MS.gene065209:CDS |
| CATATTGAAGTTGATTCATA+AGG | 0.369783 | 8.1:-36340265 | None:intergenic |
| TCAACAAAATTTATTAGCTC+TGG | 0.373718 | 8.1:-36339582 | None:intergenic |
| TATCGAAGCTCGAAACAAAA+TGG | 0.379973 | 8.1:+36341818 | MS.gene065209:CDS |
| GATACCAGACGAGGAGGATA+TGG | 0.383939 | 8.1:+36340784 | MS.gene065209:CDS |
| CCAAAGATAAATGACCTTAG+AGG | 0.389815 | 8.1:-36342273 | None:intergenic |
| CCAAAAGAGTAAGGGAAGTA+AGG | 0.391738 | 8.1:+36340228 | MS.gene065209:CDS |
| ACTCTTTGAGTCATCATTGC+AGG | 0.395563 | 8.1:+36341477 | MS.gene065209:CDS |
| TTTCGAGGCTGGCTCAAATT+CGG | 0.396521 | 8.1:+36340427 | MS.gene065209:CDS |
| AGGTCTCATCTGGTTTCTCT+TGG | 0.403874 | 8.1:-36342229 | None:intergenic |
| TTTGGGGCTTTCGGAACGTT+TGG | 0.405075 | 8.1:-36339780 | None:intergenic |
| CGAAGAACCGTGTTCCTCTA+AGG | 0.410206 | 8.1:+36342259 | MS.gene065209:CDS |
| TCGAATCTGAAGGTCTCATC+TGG | 0.411427 | 8.1:-36342239 | None:intergenic |
| AGTTTCTTCTCAAACAGCTT+TGG | 0.420468 | 8.1:+36340520 | MS.gene065209:CDS |
| TACTGTTGTTGCTTCCTCCT+CGG | 0.420959 | 8.1:-36341356 | None:intergenic |
| TTCAAAATGAACTCACACTA+TGG | 0.420988 | 8.1:+36341920 | MS.gene065209:CDS |
| TGTGATTTAACGTCATGTTT+CGG | 0.423072 | 8.1:-36341061 | None:intergenic |
| TACAAAAGATTTACTGATTG+AGG | 0.424969 | 8.1:+36341795 | MS.gene065209:CDS |
| GAACGAGAAACTTAGAGAAA+TGG | 0.426500 | 8.1:+36340637 | MS.gene065209:CDS |
| GGCTTTAACCGTGACAGAAA+TGG | 0.430771 | 8.1:+36340448 | MS.gene065209:CDS |
| GACAGAAGCAATTGTGTTGT+TGG | 0.431292 | 8.1:-36339673 | None:intergenic |
| ACTTAGAGAAATGGACGAAA+TGG | 0.431565 | 8.1:+36340646 | MS.gene065209:CDS |
| AAATCGAGTCCAAAAGAGTA+AGG | 0.433279 | 8.1:+36340219 | MS.gene065209:CDS |
| TTTAAAGCTTCTAGAAGAAG+AGG | 0.435154 | 8.1:+36339515 | MS.gene065209:CDS |
| ACTCCTAAAGCTCCTAAATC+AGG | 0.441379 | 8.1:+36339888 | MS.gene065209:CDS |
| TCGAATCTCTTCGTCTTTCA+CGG | 0.443211 | 8.1:-36341524 | None:intergenic |
| CGAGATGTAAAAGAAGTAAC+AGG | 0.444047 | 8.1:+36340320 | MS.gene065209:CDS |
| TGTTTCATATTTCTGTATCT+CGG | 0.450311 | 8.1:-36341770 | None:intergenic |
| GAAGATTAAAGAACATTTCG+AGG | 0.454058 | 8.1:+36340412 | MS.gene065209:CDS |
| GATACCGAACGAGGAGGATA+AGG | 0.464288 | 8.1:+36340991 | MS.gene065209:CDS |
| TCATATTCAAAACCTCTCCT+TGG | 0.464431 | 8.1:-36342086 | None:intergenic |
| GAGCAGAAATGTATTACAAA+AGG | 0.465180 | 8.1:+36339556 | MS.gene065209:CDS |
| GCCAAAATCTTATTGAATGA+TGG | 0.465978 | 8.1:+36341100 | MS.gene065209:CDS |
| AAATGAACTCACACTATGGC+TGG | 0.467020 | 8.1:+36341924 | MS.gene065209:CDS |
| CTCACCTTATCCTCCTCGTT+CGG | 0.467284 | 8.1:-36340995 | None:intergenic |
| CGAGGAGGCTCGCCGTTTGA+TGG | 0.468797 | 8.1:+36340118 | MS.gene065209:CDS |
| ATTAAAGAACATTTCGAGGC+TGG | 0.469351 | 8.1:+36340416 | MS.gene065209:CDS |
| CAATGAATAAATGGCCGCAT+TGG | 0.476457 | 8.1:-36341131 | None:intergenic |
| GCTGGTTCGCAACCTTGAAA+CGG | 0.479618 | 8.1:+36340580 | MS.gene065209:CDS |
| GTTGCTGATGAGCTTCAAGC+TGG | 0.484637 | 8.1:+36342126 | MS.gene065209:CDS |
| TTGGAGGGAAATGAAGAAAT+CGG | 0.485167 | 8.1:+36341583 | MS.gene065209:CDS |
| TGTTCTGATCTTCAACAACT+TGG | 0.492297 | 8.1:-36340691 | None:intergenic |
| ACCAGAAAATCATGTTATTG+AGG | 0.492750 | 8.1:+36341627 | MS.gene065209:CDS |
| ATCTTTGAGTGGAGTCTTTG+GGG | 0.494652 | 8.1:-36339796 | None:intergenic |
| ATAATAGAATCAATTGATGC+TGG | 0.495898 | 8.1:+36341271 | MS.gene065209:CDS |
| ATTGGAAAATGAAGTCCAAA+AGG | 0.496529 | 8.1:+36340967 | MS.gene065209:CDS |
| TCTCTCTGATAAAGTCCAAA+AGG | 0.496569 | 8.1:+36340760 | MS.gene065209:CDS |
| ATATTGAAGTTGATTCATAA+GGG | 0.500924 | 8.1:-36340264 | None:intergenic |
| GGAAACTGAGGGACAGATCA+AGG | 0.501428 | 8.1:+36340028 | MS.gene065209:CDS |
| CAAAAGAGTAAGGGAAGTAA+GGG | 0.506192 | 8.1:+36340229 | MS.gene065209:CDS |
| AAATCATGAAAAGGATTATG+AGG | 0.510581 | 8.1:+36341294 | MS.gene065209:CDS |
| TGATGCTGGAAATCATGAAA+AGG | 0.514888 | 8.1:+36341285 | MS.gene065209:CDS |
| TCGCAACCTTGAAACGGAAA+AGG | 0.515404 | 8.1:+36340586 | MS.gene065209:CDS |
| CTCACCATATCCTCCTCGTC+TGG | 0.518993 | 8.1:-36340788 | None:intergenic |
| TCCAATTTGCAAGACGAACT+CGG | 0.522122 | 8.1:+36340068 | MS.gene065209:CDS |
| ATCAAGACTACAATGCGCTT+CGG | 0.526939 | 8.1:-36340735 | None:intergenic |
| CGTACCTATCGGCTAAAGAT+CGG | 0.533688 | 8.1:-36339623 | None:intergenic |
| TATAATGCTGCGAAATTCCA+AGG | 0.539140 | 8.1:+36342069 | MS.gene065209:CDS |
| AACTGATGAACTCCATTCGC+TGG | 0.544339 | 8.1:+36340562 | MS.gene065209:CDS |
| CCATATAAGGAACTCTATCT+GGG | 0.544384 | 8.1:-36339698 | None:intergenic |
| TCTTCAACTTGATGCTGAGA+AGG | 0.544826 | 8.1:+36342167 | MS.gene065209:CDS |
| GAGCCGCTTCTGCCATCAAA+CGG | 0.544838 | 8.1:-36340130 | None:intergenic |
| TTAAAGCTTCTAGAAGAAGA+GGG | 0.544929 | 8.1:+36339516 | MS.gene065209:CDS |
| TCAAGTATTTCAAACAGAAG+AGG | 0.545693 | 8.1:+36340811 | MS.gene065209:CDS |
| TAGAGTTCCTTATATGGATG+AGG | 0.558198 | 8.1:+36339704 | MS.gene065209:CDS |
| TGTTGAAGAGAAGTTTAGGA+TGG | 0.566244 | 8.1:+36341687 | MS.gene065209:CDS |
| TCTGCAAGGTGCTTATAAAG+TGG | 0.568092 | 8.1:-36341895 | None:intergenic |
| TGCTAGATATTGGGAAACTG+AGG | 0.569587 | 8.1:+36340016 | MS.gene065209:CDS |
| GGAAAACAGCGCGTTGCTGA+AGG | 0.570843 | 8.1:+36341945 | MS.gene065209:CDS |
| TCGCCGTTTGATGGCAGAAG+CGG | 0.572967 | 8.1:+36340127 | MS.gene065209:CDS |
| TTGCTGATGAGCTTCAAGCT+GGG | 0.579094 | 8.1:+36342127 | MS.gene065209:CDS |
| AACAAAAGAAGAAACAATCT+CGG | 0.580327 | 8.1:+36341183 | MS.gene065209:CDS |
| CAAGGTTGCGAACCAGCGAA+TGG | 0.582849 | 8.1:-36340574 | None:intergenic |
| GTTGAAGAGAAGTTTAGGAT+GGG | 0.590016 | 8.1:+36341688 | MS.gene065209:CDS |
| AATGAAATGTGCAGATATGG+AGG | 0.592734 | 8.1:+36339476 | MS.gene065209:intron |
| CTTGTTACTGAATTTCCTTG+TGG | 0.598228 | 8.1:-36339847 | None:intergenic |
| TATATCATCATTTCAAAGCA+CGG | 0.601898 | 8.1:-36342347 | None:intergenic |
| ACAAAATGGAAAGCAACAGA+AGG | 0.603333 | 8.1:+36341832 | MS.gene065209:CDS |
| TGCTGCGAAATTCCAAGGAG+AGG | 0.604091 | 8.1:+36342074 | MS.gene065209:CDS |
| AAAAGAAGTAACAGGAACAA+AGG | 0.607695 | 8.1:+36340328 | MS.gene065209:CDS |
| TAGAAAGCAAGCAATTGAAG+AGG | 0.608037 | 8.1:+36339917 | MS.gene065209:CDS |
| ACACGGTTCTTCGAATCTGA+AGG | 0.609529 | 8.1:-36342249 | None:intergenic |
| ACGACGACGAAGCATCGCCA+AGG | 0.611893 | 8.1:+36339727 | MS.gene065209:CDS |
| AATCGAGTCCAAAAGAGTAA+GGG | 0.614608 | 8.1:+36340220 | MS.gene065209:CDS |
| TTGCAAGACGAACTCGGTGA+AGG | 0.618782 | 8.1:+36340074 | MS.gene065209:CDS |
| GGGAATCGACGAACTTCTAG+AGG | 0.619415 | 8.1:+36341708 | MS.gene065209:CDS |
| AGTTTCCCAATATCTAGCAA+TGG | 0.619821 | 8.1:-36340012 | None:intergenic |
| CGGCTAAAGATCGGTATGCA+CGG | 0.631655 | 8.1:-36339614 | None:intergenic |
| TGATAAGTGATCGTACCTAT+CGG | 0.632744 | 8.1:-36339634 | None:intergenic |
| TGGATGGAACAAAACCTCCA+AGG | 0.641564 | 8.1:+36338973 | None:intergenic |
| GCTAGATATTGGGAAACTGA+GGG | 0.645079 | 8.1:+36340017 | MS.gene065209:CDS |
| TAATGTTATTGATGACGAGG+AGG | 0.647964 | 8.1:+36340103 | MS.gene065209:CDS |
| CATACCGATCTTTAGCCGAT+AGG | 0.649267 | 8.1:+36339619 | MS.gene065209:CDS |
| AATCCAATTTGCAAAAGCCG+AGG | 0.657019 | 8.1:+36340291 | MS.gene065209:CDS |
| CCAAAAGGTGATACCGAACG+AGG | 0.672752 | 8.1:+36340982 | MS.gene065209:CDS |
| TAACGACAGCGACAGCCACA+AGG | 0.673857 | 8.1:+36339832 | MS.gene065209:CDS |
| AAAAGAAGAAACAATCTCGG+TGG | 0.674505 | 8.1:+36341186 | MS.gene065209:CDS |
| TGTTAATGTTATTGATGACG+AGG | 0.676108 | 8.1:+36340100 | MS.gene065209:CDS |
| TAGGTACGATCACTTATCAA+CGG | 0.681679 | 8.1:+36339638 | MS.gene065209:CDS |
| AAAGGTGATACCAGACGAGG+AGG | 0.687210 | 8.1:+36340778 | MS.gene065209:CDS |
| CCAAAAGGTGATACCAGACG+AGG | 0.697912 | 8.1:+36340775 | MS.gene065209:CDS |
| AAAGGTGATACCGAACGAGG+AGG | 0.701902 | 8.1:+36340985 | MS.gene065209:CDS |
| TAAATGACCTTAGAGGAACA+CGG | 0.755952 | 8.1:-36342266 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TACTTGTTTTATAATTATAT+AGG | + | chr8.1:36339435-36339454 | MS.gene065209:intron | 10.0% |
| !! | AATATACAAACAAGAAAATA+AGG | - | chr8.1:36339010-36339029 | None:intergenic | 15.0% |
| !!! | ATATTGAAGTTGATTCATAA+GGG | - | chr8.1:36340267-36340286 | None:intergenic | 20.0% |
| !!! | TTCATTTTCCAATGAATAAA+TGG | - | chr8.1:36341143-36341162 | None:intergenic | 20.0% |
| ! | AAAACTTAACTATCCATGTA+CGG | - | chr8.1:36339282-36339301 | None:intergenic | 25.0% |
| ! | AAACAAGTACAAAACCAATA+TGG | - | chr8.1:36339424-36339443 | None:intergenic | 25.0% |
| ! | AAATCATGAAAAGGATTATG+AGG | + | chr8.1:36341294-36341313 | MS.gene065209:CDS | 25.0% |
| ! | AACAAAAGAAGAAACAATCT+CGG | + | chr8.1:36341183-36341202 | MS.gene065209:CDS | 25.0% |
| ! | ATAAGGAGAAAAAATAACCT+TGG | - | chr8.1:36338993-36339012 | None:intergenic | 25.0% |
| ! | ATAATAGAATCAATTGATGC+TGG | + | chr8.1:36341271-36341290 | MS.gene065209:CDS | 25.0% |
| ! | ATAATTCCATTGCTAGATAT+TGG | + | chr8.1:36340006-36340025 | MS.gene065209:CDS | 25.0% |
| ! | GCAAAGTTGAATGAAAAATT+TGG | + | chr8.1:36342195-36342214 | MS.gene065209:CDS | 25.0% |
| ! | TAATTCCATTGCTAGATATT+GGG | + | chr8.1:36340007-36340026 | MS.gene065209:CDS | 25.0% |
| ! | TACAAAACCAATATGGTAAT+AGG | - | chr8.1:36339417-36339436 | None:intergenic | 25.0% |
| ! | TCAACAAAATTTATTAGCTC+TGG | - | chr8.1:36339585-36339604 | None:intergenic | 25.0% |
| ! | TTTCTATTCAATCCTGATTT+AGG | - | chr8.1:36339903-36339922 | None:intergenic | 25.0% |
| !! | ACCATCATTCAATAAGATTT+TGG | - | chr8.1:36341104-36341123 | None:intergenic | 25.0% |
| !! | CATATTGAAGTTGATTCATA+AGG | - | chr8.1:36340268-36340287 | None:intergenic | 25.0% |
| !! | TACAAAAGATTTACTGATTG+AGG | + | chr8.1:36341795-36341814 | MS.gene065209:CDS | 25.0% |
| !! | TGTGATTTAACATCATGTTT+TGG | - | chr8.1:36340878-36340897 | None:intergenic | 25.0% |
| !! | TGTTTCATATTTCTGTATCT+CGG | - | chr8.1:36341773-36341792 | None:intergenic | 25.0% |
| !! | TTCATTTTCCAATGAATCAA+TGG | - | chr8.1:36340960-36340979 | None:intergenic | 25.0% |
| !!! | ACACTTTTTAAATCTTTGAG+TGG | - | chr8.1:36339810-36339829 | None:intergenic | 25.0% |
| !!! | ATAGACTGTTTTTGTTTCTT+TGG | - | chr8.1:36342306-36342325 | None:intergenic | 25.0% |
| !!! | TTCTTCTTTTGTTTGTGAAT+CGG | - | chr8.1:36341176-36341195 | None:intergenic | 25.0% |
| AAAAGAAGTAACAGGAACAA+AGG | + | chr8.1:36340328-36340347 | MS.gene065209:CDS | 30.0% | |
| ACCAATATGGTAATAGGTTA+TGG | - | chr8.1:36339411-36339430 | None:intergenic | 30.0% | |
| ACCAGAAAATCATGTTATTG+AGG | + | chr8.1:36341627-36341646 | MS.gene065209:CDS | 30.0% | |
| AGAATCACACATATTAAGTG+TGG | + | chr8.1:36339334-36339353 | MS.gene065209:intron | 30.0% | |
| ATTGGAAAATGAAGTCCAAA+AGG | + | chr8.1:36340967-36340986 | MS.gene065209:CDS | 30.0% | |
| CAAAATGAAATGTGCAGATA+TGG | + | chr8.1:36339473-36339492 | MS.gene065209:intron | 30.0% | |
| CCAATATGGTAATAGGTTAT+GGG | - | chr8.1:36339410-36339429 | None:intergenic | 30.0% | |
| GAAGATTAAAGAACATTTCG+AGG | + | chr8.1:36340412-36340431 | MS.gene065209:CDS | 30.0% | |
| GAGCAGAAATGTATTACAAA+AGG | + | chr8.1:36339556-36339575 | MS.gene065209:CDS | 30.0% | |
| GCCAAAATCTTATTGAATGA+TGG | + | chr8.1:36341100-36341119 | MS.gene065209:CDS | 30.0% | |
| TACGGGAAAATATTTAAGGA+AGG | + | chr8.1:36339221-36339240 | MS.gene065209:intron | 30.0% | |
| TCAAGTATTTCAAACAGAAG+AGG | + | chr8.1:36340811-36340830 | MS.gene065209:CDS | 30.0% | |
| TCTCTTTCTTTCAACACTAT+AGG | - | chr8.1:36341223-36341242 | None:intergenic | 30.0% | |
| TGTGATTTAACGTCATGTTT+CGG | - | chr8.1:36341064-36341083 | None:intergenic | 30.0% | |
| TTCAAAATGAACTCACACTA+TGG | + | chr8.1:36341920-36341939 | MS.gene065209:CDS | 30.0% | |
| TTCGTACGGGAAAATATTTA+AGG | + | chr8.1:36339217-36339236 | MS.gene065209:intron | 30.0% | |
| TTTCATACGGAAAAAAATCG+AGG | + | chr8.1:36339138-36339157 | MS.gene065209:intron | 30.0% | |
| ! | AAAAACGAGCAATACGTTTT+TGG | + | chr8.1:36339176-36339195 | MS.gene065209:intron | 30.0% |
| ! | ACTTCTTTTACATCTCGTTT+CGG | - | chr8.1:36340317-36340336 | None:intergenic | 30.0% |
| ! | AGTCTATCTTTTCAATGCAT+AGG | + | chr8.1:36342319-36342338 | MS.gene065209:CDS | 30.0% |
| ! | TCAATAACATGATTTTCTGG+TGG | - | chr8.1:36341628-36341647 | None:intergenic | 30.0% |
| ! | TCCTCAATAACATGATTTTC+TGG | - | chr8.1:36341631-36341650 | None:intergenic | 30.0% |
| ! | TTAAAGCTTCTAGAAGAAGA+GGG | + | chr8.1:36339516-36339535 | MS.gene065209:CDS | 30.0% |
| ! | TTTAAAGCTTCTAGAAGAAG+AGG | + | chr8.1:36339515-36339534 | MS.gene065209:CDS | 30.0% |
| !! | AATATTTAAGGAAGGTGTCA+CGG | + | chr8.1:36339229-36339248 | MS.gene065209:intron | 30.0% |
| !! | TACTTTTAAAGAAGATTCCG+AGG | + | chr8.1:36341339-36341358 | MS.gene065209:CDS | 30.0% |
| !! | TGTTAATGTTATTGATGACG+AGG | + | chr8.1:36340100-36340119 | MS.gene065209:CDS | 30.0% |
| !!! | ATGCTTTGCTTTTAGAGTAT+AGG | + | chr8.1:36341386-36341405 | MS.gene065209:CDS | 30.0% |
| AAAAGAAGAAACAATCTCGG+TGG | + | chr8.1:36341186-36341205 | MS.gene065209:CDS | 35.0% | |
| AAATCGAGTCCAAAAGAGTA+AGG | + | chr8.1:36340219-36340238 | MS.gene065209:CDS | 35.0% | |
| AAATCTTTGAGTGGAGTCTT+TGG | - | chr8.1:36339801-36339820 | None:intergenic | 35.0% | |
| AATAAGTGACTTACCGTACA+TGG | + | chr8.1:36339266-36339285 | MS.gene065209:intron | 35.0% | |
| AATCCTGATTTAGGAGCTTT+AGG | - | chr8.1:36339894-36339913 | None:intergenic | 35.0% | |
| AATCGAGTCCAAAAGAGTAA+GGG | + | chr8.1:36340220-36340239 | MS.gene065209:CDS | 35.0% | |
| AATCTTTGAGTGGAGTCTTT+GGG | - | chr8.1:36339800-36339819 | None:intergenic | 35.0% | |
| AATGAAATGTGCAGATATGG+AGG | + | chr8.1:36339476-36339495 | MS.gene065209:intron | 35.0% | |
| ACAAAATGGAAAGCAACAGA+AGG | + | chr8.1:36341832-36341851 | MS.gene065209:CDS | 35.0% | |
| ACTTAGAGAAATGGACGAAA+TGG | + | chr8.1:36340646-36340665 | MS.gene065209:CDS | 35.0% | |
| AGGAGAAAAAATAACCTTGG+AGG | - | chr8.1:36338990-36339009 | None:intergenic | 35.0% | |
| AGTTTCCCAATATCTAGCAA+TGG | - | chr8.1:36340015-36340034 | None:intergenic | 35.0% | |
| AGTTTCTTCTCAAACAGCTT+TGG | + | chr8.1:36340520-36340539 | MS.gene065209:CDS | 35.0% | |
| ATACGGAAAAAAATCGAGGA+AGG | + | chr8.1:36339142-36339161 | MS.gene065209:intron | 35.0% | |
| ATTAAAGAACATTTCGAGGC+TGG | + | chr8.1:36340416-36340435 | MS.gene065209:CDS | 35.0% | |
| CAAAAGAGTAAGGGAAGTAA+GGG | + | chr8.1:36340229-36340248 | MS.gene065209:CDS | 35.0% | |
| CAATGAATCAATGGCTGTAT+TGG | - | chr8.1:36340951-36340970 | None:intergenic | 35.0% | |
| CATATTAAGTGTGGAGAAGA+TGG | + | chr8.1:36339343-36339362 | MS.gene065209:intron | 35.0% | |
| CCAAAGATAAATGACCTTAG+AGG | - | chr8.1:36342276-36342295 | None:intergenic | 35.0% | |
| CCATATAAGGAACTCTATCT+GGG | - | chr8.1:36339701-36339720 | None:intergenic | 35.0% | |
| CCCATAACCTATTACCATAT+TGG | + | chr8.1:36339407-36339426 | MS.gene065209:intron | 35.0% | |
| CGAGATGTAAAAGAAGTAAC+AGG | + | chr8.1:36340320-36340339 | MS.gene065209:CDS | 35.0% | |
| CTTGTTACTGAATTTCCTTG+TGG | - | chr8.1:36339850-36339869 | None:intergenic | 35.0% | |
| GAACGAGAAACTTAGAGAAA+TGG | + | chr8.1:36340637-36340656 | MS.gene065209:CDS | 35.0% | |
| TAAATGACCTTAGAGGAACA+CGG | - | chr8.1:36342269-36342288 | None:intergenic | 35.0% | |
| TAGAAAGCAAGCAATTGAAG+AGG | + | chr8.1:36339917-36339936 | MS.gene065209:CDS | 35.0% | |
| TAGAGTTCCTTATATGGATG+AGG | + | chr8.1:36339704-36339723 | MS.gene065209:CDS | 35.0% | |
| TAGGTACGATCACTTATCAA+CGG | + | chr8.1:36339638-36339657 | MS.gene065209:CDS | 35.0% | |
| TATAATGCTGCGAAATTCCA+AGG | + | chr8.1:36342069-36342088 | MS.gene065209:CDS | 35.0% | |
| TATCGAAGCTCGAAACAAAA+TGG | + | chr8.1:36341818-36341837 | MS.gene065209:CDS | 35.0% | |
| TCATATTCAAAACCTCTCCT+TGG | - | chr8.1:36342089-36342108 | None:intergenic | 35.0% | |
| TCCATATAAGGAACTCTATC+TGG | - | chr8.1:36339702-36339721 | None:intergenic | 35.0% | |
| TCTCTCTGATAAAGTCCAAA+AGG | + | chr8.1:36340760-36340779 | MS.gene065209:CDS | 35.0% | |
| TGATAAGTGATCGTACCTAT+CGG | - | chr8.1:36339637-36339656 | None:intergenic | 35.0% | |
| TGATGCTGGAAATCATGAAA+AGG | + | chr8.1:36341285-36341304 | MS.gene065209:CDS | 35.0% | |
| TGATGGTAAAAAGTCCAATG+CGG | + | chr8.1:36341117-36341136 | MS.gene065209:CDS | 35.0% | |
| TGTTCTGATCTTCAACAACT+TGG | - | chr8.1:36340694-36340713 | None:intergenic | 35.0% | |
| TGTTGAAGAGAAGTTTAGGA+TGG | + | chr8.1:36341687-36341706 | MS.gene065209:CDS | 35.0% | |
| TTGGAGGGAAATGAAGAAAT+CGG | + | chr8.1:36341583-36341602 | MS.gene065209:CDS | 35.0% | |
| ! | AACTTTCCTTTTCCGTTTCA+AGG | - | chr8.1:36340595-36340614 | None:intergenic | 35.0% |
| ! | AAGAGATTTGCTCTTTCGTA+CGG | + | chr8.1:36339203-36339222 | MS.gene065209:intron | 35.0% |
| ! | AAGTCTTTTGCAGAAAAGCT+TGG | + | chr8.1:36341564-36341583 | MS.gene065209:CDS | 35.0% |
| ! | AATCCTTCTGGCATTTTTCT+TGG | - | chr8.1:36339756-36339775 | None:intergenic | 35.0% |
| ! | GTTCATTTTGAATCTCTGCA+AGG | - | chr8.1:36341912-36341931 | None:intergenic | 35.0% |
| ! | GTTGAAGAGAAGTTTAGGAT+GGG | + | chr8.1:36341688-36341707 | MS.gene065209:CDS | 35.0% |
| ! | TAGAGGAGAATCTAGAATTC+TGG | + | chr8.1:36341725-36341744 | MS.gene065209:CDS | 35.0% |
| ! | TGGGAACATTTTATGTGTTG+TGG | - | chr8.1:36339391-36339410 | None:intergenic | 35.0% |
| !! | AAGAGCATTGCTCTTTCATA+CGG | + | chr8.1:36339125-36339144 | MS.gene065209:intron | 35.0% |
| !! | CAATACAGCCATTGATTCAT+TGG | + | chr8.1:36340949-36340968 | MS.gene065209:CDS | 35.0% |
| !! | CCTCTAAGGTCATTTATCTT+TGG | + | chr8.1:36342273-36342292 | MS.gene065209:CDS | 35.0% |
| !! | TAATGTTATTGATGACGAGG+AGG | + | chr8.1:36340103-36340122 | MS.gene065209:CDS | 35.0% |
| !! | TTTTAAAGAAGATTCCGAGG+AGG | + | chr8.1:36341342-36341361 | MS.gene065209:CDS | 35.0% |
| !! | TTTTTCTGCCATTTCTGTCA+CGG | - | chr8.1:36340459-36340478 | None:intergenic | 35.0% |
| AAATGAACTCACACTATGGC+TGG | + | chr8.1:36341924-36341943 | MS.gene065209:CDS | 40.0% | |
| AATCCAATTTGCAAAAGCCG+AGG | + | chr8.1:36340291-36340310 | MS.gene065209:CDS | 40.0% | |
| ACGCTGTTGTTATCTCTTCT+TGG | - | chr8.1:36342008-36342027 | None:intergenic | 40.0% | |
| ACTCCTAAAGCTCCTAAATC+AGG | + | chr8.1:36339888-36339907 | MS.gene065209:CDS | 40.0% | |
| ACTCTTTGAGTCATCATTGC+AGG | + | chr8.1:36341477-36341496 | MS.gene065209:CDS | 40.0% | |
| ATCAAGACTACAATGCGCTT+CGG | - | chr8.1:36340738-36340757 | None:intergenic | 40.0% | |
| ATCTTTGAGTGGAGTCTTTG+GGG | - | chr8.1:36339799-36339818 | None:intergenic | 40.0% | |
| CAATGAATAAATGGCCGCAT+TGG | - | chr8.1:36341134-36341153 | None:intergenic | 40.0% | |
| CAATGCGGCCATTTATTCAT+TGG | + | chr8.1:36341132-36341151 | MS.gene065209:CDS | 40.0% | |
| CCAAAAGAGTAAGGGAAGTA+AGG | + | chr8.1:36340228-36340247 | MS.gene065209:CDS | 40.0% | |
| CCCAGATAGAGTTCCTTATA+TGG | + | chr8.1:36339698-36339717 | MS.gene065209:CDS | 40.0% | |
| CTGCTGTTGAAGAGAAGTTT+AGG | + | chr8.1:36341683-36341702 | MS.gene065209:CDS | 40.0% | |
| GACAGAAGCAATTGTGTTGT+TGG | - | chr8.1:36339676-36339695 | None:intergenic | 40.0% | |
| GCTAGATATTGGGAAACTGA+GGG | + | chr8.1:36340017-36340036 | MS.gene065209:CDS | 40.0% | |
| TCCAATTTGCAAGACGAACT+CGG | + | chr8.1:36340068-36340087 | MS.gene065209:CDS | 40.0% | |
| TCGAATCTCTTCGTCTTTCA+CGG | - | chr8.1:36341527-36341546 | None:intergenic | 40.0% | |
| TCTTCAACTTGATGCTGAGA+AGG | + | chr8.1:36342167-36342186 | MS.gene065209:CDS | 40.0% | |
| TGCTAGATATTGGGAAACTG+AGG | + | chr8.1:36340016-36340035 | MS.gene065209:CDS | 40.0% | |
| ! | ACGTTTGGTTTCAATCCTTC+TGG | - | chr8.1:36339768-36339787 | None:intergenic | 40.0% |
| ! | AGAGATTTGCTCTTTCGTAC+GGG | + | chr8.1:36339204-36339223 | MS.gene065209:intron | 40.0% |
| ! | CCTTACTTCCCTTACTCTTT+TGG | - | chr8.1:36340231-36340250 | None:intergenic | 40.0% |
| ! | CTTTTGCAGAAAAGCTTGGA+GGG | + | chr8.1:36341568-36341587 | MS.gene065209:CDS | 40.0% |
| ! | TCAACAGCAGAAGTTGATTC+TGG | - | chr8.1:36341673-36341692 | None:intergenic | 40.0% |
| ! | TCTGCAAGGTGCTTATAAAG+TGG | - | chr8.1:36341898-36341917 | None:intergenic | 40.0% |
| ! | TCTTTTGCAGAAAAGCTTGG+AGG | + | chr8.1:36341567-36341586 | MS.gene065209:CDS | 40.0% |
| !! | AAAAAATCGAGGAAGGTGTC+TGG | + | chr8.1:36339149-36339168 | MS.gene065209:intron | 40.0% |
| AACTGATGAACTCCATTCGC+TGG | + | chr8.1:36340562-36340581 | MS.gene065209:CDS | 45.0% | |
| ACACGGTTCTTCGAATCTGA+AGG | - | chr8.1:36342252-36342271 | None:intergenic | 45.0% | |
| ACCGAGTTCGTCTTGCAAAT+TGG | - | chr8.1:36340072-36340091 | None:intergenic | 45.0% | |
| CATACCGATCTTTAGCCGAT+AGG | + | chr8.1:36339619-36339638 | MS.gene065209:CDS | 45.0% | |
| CCACCAAGAAAAATGCCAGA+AGG | + | chr8.1:36339750-36339769 | MS.gene065209:CDS | 45.0% | |
| GCAAACGTGACAATGCTTCT+TGG | - | chr8.1:36340166-36340185 | None:intergenic | 45.0% | |
| GTCACGTTTGCAAGAGAAAC+AGG | + | chr8.1:36340175-36340194 | MS.gene065209:CDS | 45.0% | |
| TCGAATCTGAAGGTCTCATC+TGG | - | chr8.1:36342242-36342261 | None:intergenic | 45.0% | |
| TCGCAACCTTGAAACGGAAA+AGG | + | chr8.1:36340586-36340605 | MS.gene065209:CDS | 45.0% | |
| TCGTCGTCCTCATCCATATA+AGG | - | chr8.1:36339714-36339733 | None:intergenic | 45.0% | |
| TTGCTGATGAGCTTCAAGCT+GGG | + | chr8.1:36342127-36342146 | MS.gene065209:CDS | 45.0% | |
| TTTACATCTCGTTTCGGCCT+CGG | - | chr8.1:36340311-36340330 | None:intergenic | 45.0% | |
| ! | AGGTCTCATCTGGTTTCTCT+TGG | - | chr8.1:36342232-36342251 | None:intergenic | 45.0% |
| ! | CCTTCTGGCATTTTTCTTGG+TGG | - | chr8.1:36339753-36339772 | None:intergenic | 45.0% |
| ! | CGTACCTATCGGCTAAAGAT+CGG | - | chr8.1:36339626-36339645 | None:intergenic | 45.0% |
| ! | GGCTTTAACCGTGACAGAAA+TGG | + | chr8.1:36340448-36340467 | MS.gene065209:CDS | 45.0% |
| ! | TACTGTTGTTGCTTCCTCCT+CGG | - | chr8.1:36341359-36341378 | None:intergenic | 45.0% |
| ! | TTTCGAGGCTGGCTCAAATT+CGG | + | chr8.1:36340427-36340446 | MS.gene065209:CDS | 45.0% |
| !! | TGATTTTCTGGTGGCTGCAA+AGG | - | chr8.1:36341619-36341638 | None:intergenic | 45.0% |
| AAAGGTGATACCAGACGAGG+AGG | + | chr8.1:36340778-36340797 | MS.gene065209:CDS | 50.0% | |
| AAAGGTGATACCGAACGAGG+AGG | + | chr8.1:36340985-36341004 | MS.gene065209:CDS | 50.0% | |
| CCAAAAGGTGATACCAGACG+AGG | + | chr8.1:36340775-36340794 | MS.gene065209:CDS | 50.0% | |
| CCAAAAGGTGATACCGAACG+AGG | + | chr8.1:36340982-36341001 | MS.gene065209:CDS | 50.0% | |
| CGAAGAACCGTGTTCCTCTA+AGG | + | chr8.1:36342259-36342278 | MS.gene065209:CDS | 50.0% | |
| CGGCTAAAGATCGGTATGCA+CGG | - | chr8.1:36339617-36339636 | None:intergenic | 50.0% | |
| CTCACCTTATCCTCCTCGTT+CGG | - | chr8.1:36340998-36341017 | None:intergenic | 50.0% | |
| GATACCAGACGAGGAGGATA+TGG | + | chr8.1:36340784-36340803 | MS.gene065209:CDS | 50.0% | |
| GATACCGAACGAGGAGGATA+AGG | + | chr8.1:36340991-36341010 | MS.gene065209:CDS | 50.0% | |
| GGAAACTGAGGGACAGATCA+AGG | + | chr8.1:36340028-36340047 | MS.gene065209:CDS | 50.0% | |
| GGGAATCGACGAACTTCTAG+AGG | + | chr8.1:36341708-36341727 | MS.gene065209:CDS | 50.0% | |
| GTTGCTGATGAGCTTCAAGC+TGG | + | chr8.1:36342126-36342145 | MS.gene065209:CDS | 50.0% | |
| TGCTGCGAAATTCCAAGGAG+AGG | + | chr8.1:36342074-36342093 | MS.gene065209:CDS | 50.0% | |
| ! | CCTCGTCTGGTATCACCTTT+TGG | - | chr8.1:36340778-36340797 | None:intergenic | 50.0% |
| ! | CCTCGTTCGGTATCACCTTT+TGG | - | chr8.1:36340985-36341004 | None:intergenic | 50.0% |
| ! | TTGCAAGACGAACTCGGTGA+AGG | + | chr8.1:36340074-36340093 | MS.gene065209:CDS | 50.0% |
| ! | TTTGGGGCTTTCGGAACGTT+TGG | - | chr8.1:36339783-36339802 | None:intergenic | 50.0% |
| !! | AGTGGAGTCTTTGGGGCTTT+CGG | - | chr8.1:36339792-36339811 | None:intergenic | 50.0% |
| !! | GCTGGTTCGCAACCTTGAAA+CGG | + | chr8.1:36340580-36340599 | MS.gene065209:CDS | 50.0% |
| !! | GGCATTTTTCTTGGTGGCCT+TGG | - | chr8.1:36339747-36339766 | None:intergenic | 50.0% |
| !! | TTTTCTGGTGGCTGCAAAGG+AGG | - | chr8.1:36341616-36341635 | None:intergenic | 50.0% |
| CAAGGTTGCGAACCAGCGAA+TGG | - | chr8.1:36340577-36340596 | None:intergenic | 55.0% | |
| CTCACCATATCCTCCTCGTC+TGG | - | chr8.1:36340791-36340810 | None:intergenic | 55.0% | |
| GAGCCGCTTCTGCCATCAAA+CGG | - | chr8.1:36340133-36340152 | None:intergenic | 55.0% | |
| GGAAAACAGCGCGTTGCTGA+AGG | + | chr8.1:36341945-36341964 | MS.gene065209:CDS | 55.0% | |
| TAACGACAGCGACAGCCACA+AGG | + | chr8.1:36339832-36339851 | MS.gene065209:CDS | 55.0% | |
| ! | CGGCCTCGGCTTTTGCAAAT+TGG | - | chr8.1:36340297-36340316 | None:intergenic | 55.0% |
| ! | TCGCCGTTTGATGGCAGAAG+CGG | + | chr8.1:36340127-36340146 | MS.gene065209:CDS | 55.0% |
| !! | ACGACGACGAAGCATCGCCA+AGG | + | chr8.1:36339727-36339746 | MS.gene065209:CDS | 60.0% |
| CGAGGAGGCTCGCCGTTTGA+TGG | + | chr8.1:36340118-36340137 | MS.gene065209:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 36338976 | 36342362 | 36338976 | ID=MS.gene065209 |
| chr8.1 | mRNA | 36338976 | 36342362 | 36338976 | ID=MS.gene065209.t1;Parent=MS.gene065209 |
| chr8.1 | exon | 36338976 | 36338994 | 36338976 | ID=MS.gene065209.t1.exon1;Parent=MS.gene065209.t1 |
| chr8.1 | CDS | 36338976 | 36338994 | 36338976 | ID=cds.MS.gene065209.t1;Parent=MS.gene065209.t1 |
| chr8.1 | exon | 36339490 | 36342362 | 36339490 | ID=MS.gene065209.t1.exon2;Parent=MS.gene065209.t1 |
| chr8.1 | CDS | 36339490 | 36342362 | 36339490 | ID=cds.MS.gene065209.t1;Parent=MS.gene065209.t1 |
| Gene Sequence |
| Protein sequence |
