Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011302.t1 | XP_013444440.1 | 97 | 670 | 17 | 1 | 1 | 670 | 1 | 667 | 0.00E+00 | 1246.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011302.t1 | Q9LL45 | 36.6 | 112 | 53 | 4 | 525 | 631 | 509 | 607 | 5.3e-10 | 67.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011302.t1 | A0A072TY48 | 97.0 | 670 | 17 | 1 | 1 | 670 | 1 | 667 | 0.0e+00 | 1246.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene011302.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene011302 | MS.gene30363 | PPI |
| MS.gene07888 | MS.gene011302 | PPI |
| MS.gene011302 | MS.gene25156 | PPI |
| MS.gene011302 | MS.gene07888 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011302.t1 | MTR_8g020330 | 97.015 | 670 | 17 | 1 | 1 | 670 | 1 | 667 | 0.0 | 1337 |
| MS.gene011302.t1 | MTR_8g020330 | 96.418 | 670 | 17 | 2 | 1 | 670 | 1 | 663 | 0.0 | 1322 |
| MS.gene011302.t1 | MTR_8g020330 | 96.269 | 670 | 17 | 2 | 1 | 670 | 1 | 662 | 0.0 | 1321 |
| MS.gene011302.t1 | MTR_8g020330 | 95.672 | 670 | 17 | 3 | 1 | 670 | 1 | 658 | 0.0 | 1306 |
| MS.gene011302.t1 | MTR_8g020330 | 96.290 | 593 | 14 | 2 | 1 | 593 | 1 | 585 | 0.0 | 1166 |
| MS.gene011302.t1 | MTR_1g063940 | 38.095 | 126 | 75 | 2 | 515 | 638 | 305 | 429 | 1.06e-17 | 86.7 |
| MS.gene011302.t1 | MTR_1g063940 | 37.795 | 127 | 75 | 3 | 515 | 638 | 305 | 430 | 2.35e-17 | 85.9 |
| MS.gene011302.t1 | MTR_1g063940 | 37.795 | 127 | 75 | 3 | 515 | 638 | 313 | 438 | 2.36e-17 | 85.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011302.t1 | AT1G72650 | 38.450 | 671 | 341 | 17 | 1 | 640 | 1 | 630 | 1.24e-119 | 370 |
| MS.gene011302.t1 | AT1G72650 | 38.889 | 666 | 339 | 17 | 1 | 640 | 1 | 624 | 4.65e-119 | 369 |
| MS.gene011302.t1 | AT1G17460 | 37.089 | 639 | 339 | 18 | 7 | 641 | 5 | 584 | 1.33e-96 | 310 |
| MS.gene011302.t1 | AT1G17460 | 36.810 | 652 | 343 | 20 | 7 | 641 | 5 | 604 | 1.09e-94 | 305 |
| MS.gene011302.t1 | AT1G17460 | 36.463 | 639 | 322 | 17 | 7 | 641 | 5 | 563 | 1.14e-93 | 301 |
| MS.gene011302.t1 | AT2G37025 | 50.000 | 94 | 46 | 1 | 546 | 638 | 288 | 381 | 4.13e-20 | 93.6 |
| MS.gene011302.t1 | AT2G37025 | 50.000 | 94 | 46 | 1 | 546 | 638 | 288 | 381 | 4.13e-20 | 93.6 |
| MS.gene011302.t1 | AT2G37025 | 50.000 | 94 | 46 | 1 | 546 | 638 | 288 | 381 | 4.13e-20 | 93.6 |
| MS.gene011302.t1 | AT3G53790 | 33.600 | 125 | 67 | 4 | 515 | 631 | 272 | 388 | 4.73e-11 | 65.9 |
Find 168 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAACTTCATGAACTGTTTA+AGG | 0.149927 | 8.2:+74703241 | MS.gene011302:CDS |
| CCCGAGTAACACAAGGAATT+TGG | 0.234511 | 8.2:-74703814 | None:intergenic |
| TTAGACTCTCTTGGAGGTTC+TGG | 0.260346 | 8.2:+74703788 | MS.gene011302:CDS |
| GGCACTGCAGAGGCAGATTT+GGG | 0.280785 | 8.2:+74701993 | MS.gene011302:CDS |
| CTAAAATTGGCTCAGGAATC+GGG | 0.284289 | 8.2:-74706723 | None:intergenic |
| TCTCTCACACGTACTAAAAT+TGG | 0.292996 | 8.2:-74706736 | None:intergenic |
| GAAGCTAAATGCAAAATTTC+AGG | 0.293352 | 8.2:+74702016 | MS.gene011302:CDS |
| AGGCACTGCAGAGGCAGATT+TGG | 0.303362 | 8.2:+74701992 | MS.gene011302:CDS |
| TGTAACCTCTGCGGAAAATA+TGG | 0.305933 | 8.2:+74703433 | MS.gene011302:CDS |
| TCCAAATTCCTTGTGTTACT+CGG | 0.328725 | 8.2:+74703813 | MS.gene011302:CDS |
| ACTAAAATTGGCTCAGGAAT+CGG | 0.332607 | 8.2:-74706724 | None:intergenic |
| AAGACTGGAAAATCTTAATA+TGG | 0.340239 | 8.2:+74703538 | MS.gene011302:CDS |
| GAACTGTTTAAGGTCACTTT+TGG | 0.340400 | 8.2:+74703251 | MS.gene011302:CDS |
| TTAGGCCTCAATTCCTGCCT+TGG | 0.347102 | 8.2:-74705435 | None:intergenic |
| CCCTCTGTGGCATGACTTGA+GGG | 0.348574 | 8.2:-74705468 | None:intergenic |
| TACCCAGGCGTTTCACAATT+AGG | 0.349710 | 8.2:+74701972 | MS.gene011302:intron |
| ATGCTATAGAATGTGCTTCC+TGG | 0.350653 | 8.2:-74703049 | None:intergenic |
| ATTACTTCATCATCTGTTGC+AGG | 0.361219 | 8.2:-74701421 | None:intergenic |
| TCAATCGAAAGATCATCTTC+TGG | 0.362969 | 8.2:+74701523 | MS.gene011302:CDS |
| TGCAGACACTGGACAGAGTA+TGG | 0.373112 | 8.2:+74701492 | MS.gene011302:CDS |
| AGCTGTTAACTTGCTTGAAC+TGG | 0.373535 | 8.2:-74706794 | None:intergenic |
| GTGGTAAATGTTCTTGTCTC+TGG | 0.379761 | 8.2:-74703761 | None:intergenic |
| TATAGTCTTAGTAATCAATC+TGG | 0.381950 | 8.2:+74703083 | MS.gene011302:CDS |
| CGAACAAGTTTGTACACAAC+TGG | 0.389839 | 8.2:-74699720 | None:intergenic |
| ATGGGCGAGGCTGCAAAGTC+AGG | 0.396257 | 8.2:+74704495 | MS.gene011302:CDS |
| TCTGTCTGAAACTCCATTCC+AGG | 0.407475 | 8.2:+74703031 | MS.gene011302:CDS |
| GGAAACAGTTGTTGGAATTG+AGG | 0.407478 | 8.2:+74699617 | MS.gene011302:CDS |
| CCTTGTTGAGGTATTGAAAC+TGG | 0.410633 | 8.2:+74705554 | MS.gene011302:CDS |
| CAGTTGTGTACAAACTTGTT+CGG | 0.413667 | 8.2:+74699721 | MS.gene011302:CDS |
| ACCTTCACAGGCATTGAACT+TGG | 0.414599 | 8.2:-74704582 | None:intergenic |
| TATCACTCCTCCGGAAGGTC+TGG | 0.414828 | 8.2:-74703123 | None:intergenic |
| AATAAAGTCGTTAGCAATCA+TGG | 0.425285 | 8.2:+74704519 | MS.gene011302:CDS |
| GACAGATGGAGAAATATGTT+TGG | 0.426126 | 8.2:+74703202 | MS.gene011302:CDS |
| TATTCAATGGAAACAGTTGT+TGG | 0.426429 | 8.2:+74699609 | None:intergenic |
| TCAGTTGTGCCAATCATTAC+CGG | 0.432862 | 8.2:-74705411 | None:intergenic |
| TTGCTTGAACTGGAATTTGA+AGG | 0.433165 | 8.2:-74706784 | None:intergenic |
| TCAAGCAAGTTAACAGCTAA+TGG | 0.433448 | 8.2:+74706799 | MS.gene011302:CDS |
| TTTCAGAAATTCCATCCAAC+TGG | 0.433530 | 8.2:+74704471 | MS.gene011302:intron |
| ACCACCAGGTTAGACTCTCT+TGG | 0.437848 | 8.2:+74703779 | MS.gene011302:CDS |
| GATCAGTGTTCCAGACCTTC+CGG | 0.438443 | 8.2:+74703113 | MS.gene011302:CDS |
| CATGTTATGCCGGGCCTGCT+AGG | 0.439474 | 8.2:+74703729 | MS.gene011302:CDS |
| GATGCTGCAAAAGGTTAAAC+AGG | 0.440482 | 8.2:+74702908 | MS.gene011302:CDS |
| GGAATTGAGGATTATGATGA+TGG | 0.451484 | 8.2:+74699630 | MS.gene011302:CDS |
| ATCTTCTGGGAAGCTTCGAT+TGG | 0.453710 | 8.2:+74701537 | MS.gene011302:CDS |
| GGTGTGTCGCGGTGTGGACC+AGG | 0.455670 | 8.2:+74705582 | MS.gene011302:CDS |
| CAATCGAAAGATCATCTTCT+GGG | 0.456715 | 8.2:+74701524 | MS.gene011302:CDS |
| TAAAAGTACGGGACACATAC+AGG | 0.458554 | 8.2:+74703697 | MS.gene011302:CDS |
| CGCGGTGTGGACCAGGGAGG+TGG | 0.459826 | 8.2:+74705589 | MS.gene011302:CDS |
| ACAAACAGTGGTTGAGGAGG+AGG | 0.470154 | 8.2:+74703294 | MS.gene011302:CDS |
| GATTATGATGATGGGAAGCT+TGG | 0.470512 | 8.2:+74699639 | MS.gene011302:CDS |
| GTCAAGTTCTAATAAAAGTA+CGG | 0.470595 | 8.2:+74703685 | MS.gene011302:CDS |
| GCCCTCTGTGGCATGACTTG+AGG | 0.473621 | 8.2:-74705469 | None:intergenic |
| AAGCAGTATCCGGTAATGAT+TGG | 0.478775 | 8.2:+74705402 | MS.gene011302:CDS |
| AGTTGTGTACAAACTTGTTC+GGG | 0.487495 | 8.2:+74699722 | MS.gene011302:CDS |
| CCAAATTCCTTGTGTTACTC+GGG | 0.488276 | 8.2:+74703814 | MS.gene011302:CDS |
| GAGGTATTGAAACTGGTTGA+TGG | 0.490269 | 8.2:+74705561 | MS.gene011302:CDS |
| GAAAGATAAGAAGCAGTATC+CGG | 0.494461 | 8.2:+74705392 | MS.gene011302:CDS |
| AGAAACTTCGCTTGTCATCT+CGG | 0.494772 | 8.2:+74702934 | MS.gene011302:CDS |
| AGTATGCATGGAGACAGAGC+AGG | 0.495168 | 8.2:+74706841 | MS.gene011302:CDS |
| CTCTTCAATATATCGCTTAG+TGG | 0.496612 | 8.2:-74703624 | None:intergenic |
| ACAGCTAATGGTGCAACTAA+TGG | 0.498002 | 8.2:+74706811 | MS.gene011302:CDS |
| AGTTAATATTCCCACTGCTA+AGG | 0.498162 | 8.2:+74705497 | MS.gene011302:CDS |
| ATAGAATGTGCTTCCTGGAA+TGG | 0.499600 | 8.2:-74703044 | None:intergenic |
| GGAAAATATGGCTGTACAAA+GGG | 0.504045 | 8.2:+74703445 | MS.gene011302:CDS |
| CCTCGCCCATGCCAGTTGGA+TGG | 0.507185 | 8.2:-74704482 | None:intergenic |
| GCTTCTCCAACATGTTATGC+CGG | 0.508015 | 8.2:+74703719 | MS.gene011302:CDS |
| TGCACCAACACCTGCTGATG+AGG | 0.508018 | 8.2:+74705825 | MS.gene011302:CDS |
| GTCTTGTTTCAGAAGCAACT+TGG | 0.508839 | 8.2:-74703520 | None:intergenic |
| ACCGTCTGATGAACCTTCAC+AGG | 0.512080 | 8.2:-74704594 | None:intergenic |
| ATTTGTACATGAGAATGAAC+AGG | 0.513633 | 8.2:-74702960 | None:intergenic |
| GTTAATATTCCCACTGCTAA+GGG | 0.514901 | 8.2:+74705498 | MS.gene011302:CDS |
| TGATATGATGTTCAGGTTGA+AGG | 0.515704 | 8.2:+74701382 | MS.gene011302:intron |
| TCTGGATAAGCATTCCTAGC+AGG | 0.519734 | 8.2:-74703743 | None:intergenic |
| CTGATCCAAGGCAGGAATTG+AGG | 0.519818 | 8.2:+74705430 | MS.gene011302:CDS |
| TATTGAACAGATGCTGCAAA+AGG | 0.522438 | 8.2:+74702899 | MS.gene011302:CDS |
| AAATTCCATCCAACTGGCAT+GGG | 0.523780 | 8.2:+74704477 | MS.gene011302:CDS |
| ACGATGTGAGTACGAAGAAA+AGG | 0.527449 | 8.2:-74705631 | None:intergenic |
| AATCTAGAGAGCAAATTCCT+AGG | 0.527590 | 8.2:+74703660 | MS.gene011302:CDS |
| TCAAGTTCTAATAAAAGTAC+GGG | 0.529173 | 8.2:+74703686 | MS.gene011302:CDS |
| GCAGCCTCGCCCATGCCAGT+TGG | 0.530923 | 8.2:-74704486 | None:intergenic |
| GAAATTCCATCCAACTGGCA+TGG | 0.533339 | 8.2:+74704476 | MS.gene011302:intron |
| AAGTTTGTACACAACTGGAT+TGG | 0.533387 | 8.2:-74699715 | None:intergenic |
| GGAGGTGGTCTGAGATCAAA+CGG | 0.534301 | 8.2:+74705604 | MS.gene011302:CDS |
| GATGTTCAGGTTGAAGGTGA+TGG | 0.534856 | 8.2:+74701388 | MS.gene011302:intron |
| AGAACCTTCTCATTTCTGAC+AGG | 0.535005 | 8.2:-74703011 | None:intergenic |
| ATCAACTTCGCAACCACCCA+CGG | 0.535596 | 8.2:-74703492 | None:intergenic |
| ACATATTTCTCCATCTGTCA+TGG | 0.536255 | 8.2:-74703198 | None:intergenic |
| AGTTGCTTCTGAAACAAGAC+TGG | 0.537136 | 8.2:+74703523 | MS.gene011302:CDS |
| CTTCGATTGGAGTGCTCGGA+AGG | 0.537545 | 8.2:+74701550 | MS.gene011302:CDS |
| CTTCTCCAACATGTTATGCC+GGG | 0.538783 | 8.2:+74703720 | MS.gene011302:CDS |
| CGGAAAATATGGCTGTACAA+AGG | 0.539341 | 8.2:+74703444 | MS.gene011302:CDS |
| TTGATCTCAGACCACCTCCC+TGG | 0.544021 | 8.2:-74705600 | None:intergenic |
| TCTTCAATATATCGCTTAGT+GGG | 0.545730 | 8.2:-74703623 | None:intergenic |
| CCATCCAACTGGCATGGGCG+AGG | 0.547124 | 8.2:+74704482 | MS.gene011302:CDS |
| TGATGAAGTAATGGAGGTCG+AGG | 0.548266 | 8.2:+74701432 | MS.gene011302:CDS |
| CAGATGAATTCGCGGAAGCA+TGG | 0.549879 | 8.2:+74706694 | MS.gene011302:intron |
| ACCAGGTTAGACTCTCTTGG+AGG | 0.551035 | 8.2:+74703782 | MS.gene011302:CDS |
| ACCACTTTCTATCACTCCTC+CGG | 0.551691 | 8.2:-74703132 | None:intergenic |
| ACACGTACTAAAATTGGCTC+AGG | 0.556714 | 8.2:-74706730 | None:intergenic |
| GTGTATGACAGATGAATTCG+CGG | 0.560439 | 8.2:+74706686 | MS.gene011302:intron |
| CCCTCAAGTCATGCCACAGA+GGG | 0.560986 | 8.2:+74705468 | MS.gene011302:CDS |
| GCACCAACACCTGCTGATGA+GGG | 0.561140 | 8.2:+74705826 | MS.gene011302:CDS |
| CTCATTCCACCCTTAGCAGT+GGG | 0.563593 | 8.2:-74705507 | None:intergenic |
| TTATTAGAACTTGACGACCT+AGG | 0.567947 | 8.2:-74703677 | None:intergenic |
| ATAGTCTTAGTAATCAATCT+GGG | 0.568164 | 8.2:+74703084 | MS.gene011302:CDS |
| ACTGGATTGGAAATCCGCTT+CGG | 0.568642 | 8.2:-74699702 | None:intergenic |
| ATTTCCTGTCAGAAATGAGA+AGG | 0.570033 | 8.2:+74703007 | MS.gene011302:CDS |
| TTGCTTTGCAGGACAAGTGG+AGG | 0.574686 | 8.2:+74705782 | MS.gene011302:intron |
| ATGCGTGTTGTTGCAGACAC+TGG | 0.574854 | 8.2:+74701481 | MS.gene011302:CDS |
| GCCAAGTTCAATGCCTGTGA+AGG | 0.575095 | 8.2:+74704581 | MS.gene011302:CDS |
| GTATAATGATTCAAAAGCCG+TGG | 0.575963 | 8.2:+74703475 | MS.gene011302:CDS |
| ATGTTCAGGTTGAAGGTGAT+GGG | 0.579628 | 8.2:+74701389 | MS.gene011302:intron |
| GGAACATGAATTAGAAGATG+AGG | 0.581860 | 8.2:+74703559 | MS.gene011302:CDS |
| TGATGCTGATAGTGAAATTG+AGG | 0.581949 | 8.2:+74704545 | MS.gene011302:CDS |
| GCCTGTGAAGGTTCATCAGA+CGG | 0.582544 | 8.2:+74704593 | MS.gene011302:CDS |
| GAAATTTATCAGCAGAACAC+TGG | 0.582582 | 8.2:-74702989 | None:intergenic |
| GTGTGTCGCGGTGTGGACCA+GGG | 0.582938 | 8.2:+74705583 | MS.gene011302:CDS |
| TGGCACAACTGATCCAAGGC+AGG | 0.586281 | 8.2:+74705422 | MS.gene011302:CDS |
| ATGGGAAGCTTGGAGACAGT+GGG | 0.587778 | 8.2:+74699649 | MS.gene011302:CDS |
| TGCAACAGATGATGAAGTAA+TGG | 0.588284 | 8.2:+74701423 | MS.gene011302:CDS |
| ATAAGCATTCCTAGCAGGCC+CGG | 0.588525 | 8.2:-74703738 | None:intergenic |
| GGAGGAAGCATCATCGAGCA+TGG | 0.588802 | 8.2:+74705529 | MS.gene011302:CDS |
| TCGTACCTCTGTTGATCTCA+AGG | 0.591435 | 8.2:+74705650 | MS.gene011302:CDS |
| TGAAAGACAAACAGTGGTTG+AGG | 0.593919 | 8.2:+74703288 | MS.gene011302:CDS |
| TCCGGAGGAGTGATAGAAAG+TGG | 0.595035 | 8.2:+74703131 | MS.gene011302:CDS |
| AATGGTGCAAGGAGTATGCA+TGG | 0.595350 | 8.2:+74706829 | MS.gene011302:CDS |
| GAAGCTTCGATTGGAGTGCT+CGG | 0.603127 | 8.2:+74701546 | MS.gene011302:CDS |
| ATGCTTTGTCTTCACCGAAG+CGG | 0.604040 | 8.2:+74699688 | MS.gene011302:CDS |
| GAATTGAGGATTATGATGAT+GGG | 0.607731 | 8.2:+74699631 | MS.gene011302:CDS |
| ACCAACACCTGCTGATGAGG+GGG | 0.616120 | 8.2:+74705828 | MS.gene011302:CDS |
| GTTGATGGTGTGTCGCGGTG+TGG | 0.617079 | 8.2:+74705576 | MS.gene011302:CDS |
| CCTCATTCCACCCTTAGCAG+TGG | 0.618351 | 8.2:-74705508 | None:intergenic |
| GCAGGCCCGGCATAACATGT+TGG | 0.619397 | 8.2:-74703725 | None:intergenic |
| TCGAGCATGGACCCTTGTTG+AGG | 0.624113 | 8.2:+74705542 | MS.gene011302:CDS |
| TTCACAATTAGGCACTGCAG+AGG | 0.626200 | 8.2:+74701983 | MS.gene011302:CDS |
| CTTTCTATCACTCCTCCGGA+AGG | 0.629182 | 8.2:-74703128 | None:intergenic |
| TTCAGGTTGAAGGTGATGGG+AGG | 0.629250 | 8.2:+74701392 | MS.gene011302:intron |
| CCAGTTTCAATACCTCAACA+AGG | 0.630743 | 8.2:-74705554 | None:intergenic |
| AGACAAGAACATTTACCACC+AGG | 0.632627 | 8.2:+74703765 | MS.gene011302:CDS |
| CACCAACACCTGCTGATGAG+GGG | 0.632966 | 8.2:+74705827 | MS.gene011302:CDS |
| GTATGCATGGAGACAGAGCA+GGG | 0.633101 | 8.2:+74706842 | MS.gene011302:CDS |
| CTGCTAAGGGTGGAATGAGG+AGG | 0.634715 | 8.2:+74705511 | MS.gene011302:CDS |
| AATATTCCCACTGCTAAGGG+TGG | 0.635127 | 8.2:+74705501 | MS.gene011302:CDS |
| TAAAATTGGCTCAGGAATCG+GGG | 0.636315 | 8.2:-74706722 | None:intergenic |
| TGATTGGCACAACTGATCCA+AGG | 0.638247 | 8.2:+74705418 | MS.gene011302:CDS |
| CTTCGCACCCGAGTAACACA+AGG | 0.639559 | 8.2:-74703821 | None:intergenic |
| ACCTCCAAGAGAGTCTAACC+TGG | 0.641656 | 8.2:-74703783 | None:intergenic |
| ATTAACTATATTGCCCTCTG+TGG | 0.645795 | 8.2:-74705481 | None:intergenic |
| ATGGTGCAACTAATGGTGCA+AGG | 0.647506 | 8.2:+74706818 | MS.gene011302:CDS |
| GCACTGCAGAGGCAGATTTG+GGG | 0.651789 | 8.2:+74701994 | MS.gene011302:CDS |
| CCACTGCTAAGGGTGGAATG+AGG | 0.651906 | 8.2:+74705508 | MS.gene011302:CDS |
| TATAATGATTCAAAAGCCGT+GGG | 0.654536 | 8.2:+74703476 | MS.gene011302:CDS |
| AAGACAAACAGTGGTTGAGG+AGG | 0.656203 | 8.2:+74703291 | MS.gene011302:CDS |
| GGGTGCGAAGAAGTCGTCCA+CGG | 0.656929 | 8.2:+74703834 | MS.gene011302:CDS |
| AACTGGTTGATGGTGTGTCG+CGG | 0.661368 | 8.2:+74705571 | MS.gene011302:CDS |
| CAAAGCGGAATTGACAGCAG+AGG | 0.662074 | 8.2:-74703162 | None:intergenic |
| GATGGGAAGCTTGGAGACAG+TGG | 0.663251 | 8.2:+74699648 | MS.gene011302:CDS |
| AACAGATGATGAAGTAATGG+AGG | 0.663256 | 8.2:+74701426 | MS.gene011302:CDS |
| AATGATTCAAAAGCCGTGGG+TGG | 0.666719 | 8.2:+74703479 | MS.gene011302:CDS |
| CTACTGTGAAAGACAAACAG+TGG | 0.669591 | 8.2:+74703282 | MS.gene011302:CDS |
| TCCCTCAAGTCATGCCACAG+AGG | 0.700875 | 8.2:+74705467 | MS.gene011302:CDS |
| TCCAAGAGAGTCTAACCTGG+TGG | 0.701922 | 8.2:-74703780 | None:intergenic |
| TGCTGCAGCTGTAACCTCTG+CGG | 0.706466 | 8.2:+74703424 | MS.gene011302:CDS |
| CAGTGTTCCAGACCTTCCGG+AGG | 0.711228 | 8.2:+74703116 | MS.gene011302:CDS |
| TGTCGCGGTGTGGACCAGGG+AGG | 0.718246 | 8.2:+74705586 | MS.gene011302:CDS |
| GAGTACCTTGAGATCAACAG+AGG | 0.719395 | 8.2:-74705655 | None:intergenic |
| CAGTTTCAATACCTCAACAA+GGG | 0.719688 | 8.2:-74705553 | None:intergenic |
| AATTGGCTCAGGAATCGGGG+CGG | 0.733377 | 8.2:-74706719 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 74699615 | 74706873 | 74699615 | ID=MS.gene011302 |
| chr8.2 | mRNA | 74699615 | 74706873 | 74699615 | ID=MS.gene011302.t1;Parent=MS.gene011302 |
| chr8.2 | exon | 74699615 | 74699743 | 74699615 | ID=MS.gene011302.t1.exon1;Parent=MS.gene011302.t1 |
| chr8.2 | CDS | 74699615 | 74699743 | 74699615 | ID=cds.MS.gene011302.t1;Parent=MS.gene011302.t1 |
| chr8.2 | exon | 74701397 | 74701571 | 74701397 | ID=MS.gene011302.t1.exon2;Parent=MS.gene011302.t1 |
| chr8.2 | CDS | 74701397 | 74701571 | 74701397 | ID=cds.MS.gene011302.t1;Parent=MS.gene011302.t1 |
| chr8.2 | exon | 74701979 | 74702037 | 74701979 | ID=MS.gene011302.t1.exon3;Parent=MS.gene011302.t1 |
| chr8.2 | CDS | 74701979 | 74702037 | 74701979 | ID=cds.MS.gene011302.t1;Parent=MS.gene011302.t1 |
| chr8.2 | exon | 74702897 | 74703877 | 74702897 | ID=MS.gene011302.t1.exon4;Parent=MS.gene011302.t1 |
| chr8.2 | CDS | 74702897 | 74703877 | 74702897 | ID=cds.MS.gene011302.t1;Parent=MS.gene011302.t1 |
| chr8.2 | exon | 74704477 | 74704614 | 74704477 | ID=MS.gene011302.t1.exon5;Parent=MS.gene011302.t1 |
| chr8.2 | CDS | 74704477 | 74704614 | 74704477 | ID=cds.MS.gene011302.t1;Parent=MS.gene011302.t1 |
| chr8.2 | exon | 74705375 | 74705671 | 74705375 | ID=MS.gene011302.t1.exon6;Parent=MS.gene011302.t1 |
| chr8.2 | CDS | 74705375 | 74705671 | 74705375 | ID=cds.MS.gene011302.t1;Parent=MS.gene011302.t1 |
| chr8.2 | exon | 74705793 | 74705849 | 74705793 | ID=MS.gene011302.t1.exon7;Parent=MS.gene011302.t1 |
| chr8.2 | CDS | 74705793 | 74705849 | 74705793 | ID=cds.MS.gene011302.t1;Parent=MS.gene011302.t1 |
| chr8.2 | exon | 74706697 | 74706873 | 74706697 | ID=MS.gene011302.t1.exon8;Parent=MS.gene011302.t1 |
| chr8.2 | CDS | 74706697 | 74706873 | 74706697 | ID=cds.MS.gene011302.t1;Parent=MS.gene011302.t1 |
| Gene Sequence |
| Protein sequence |
