Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07888.t1 | XP_013444440.1 | 97.3 | 670 | 15 | 1 | 1 | 670 | 1 | 667 | 0.00E+00 | 1253.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07888.t1 | Q9LL45 | 33.8 | 142 | 74 | 5 | 497 | 631 | 479 | 607 | 1.5e-09 | 66.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07888.t1 | A0A072TY48 | 97.3 | 670 | 15 | 1 | 1 | 670 | 1 | 667 | 0.0e+00 | 1253.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene07888.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene07888 | MS.gene011302 | PPI |
| MS.gene07888 | MS.gene30363 | PPI |
| MS.gene07888 | MS.gene25156 | PPI |
| MS.gene011302 | MS.gene07888 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07888.t1 | MTR_8g020330 | 97.313 | 670 | 15 | 1 | 1 | 670 | 1 | 667 | 0.0 | 1345 |
| MS.gene07888.t1 | MTR_8g020330 | 96.716 | 670 | 15 | 2 | 1 | 670 | 1 | 663 | 0.0 | 1330 |
| MS.gene07888.t1 | MTR_8g020330 | 96.567 | 670 | 15 | 2 | 1 | 670 | 1 | 662 | 0.0 | 1330 |
| MS.gene07888.t1 | MTR_8g020330 | 95.970 | 670 | 15 | 3 | 1 | 670 | 1 | 658 | 0.0 | 1314 |
| MS.gene07888.t1 | MTR_8g020330 | 96.627 | 593 | 12 | 2 | 1 | 593 | 1 | 585 | 0.0 | 1174 |
| MS.gene07888.t1 | MTR_1g063940 | 38.095 | 126 | 75 | 2 | 515 | 638 | 305 | 429 | 1.17e-17 | 86.7 |
| MS.gene07888.t1 | MTR_1g063940 | 37.795 | 127 | 75 | 3 | 515 | 638 | 305 | 430 | 2.64e-17 | 85.5 |
| MS.gene07888.t1 | MTR_1g063940 | 37.795 | 127 | 75 | 3 | 515 | 638 | 313 | 438 | 2.98e-17 | 85.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07888.t1 | AT1G72650 | 38.301 | 671 | 342 | 15 | 1 | 640 | 1 | 630 | 1.86e-119 | 370 |
| MS.gene07888.t1 | AT1G72650 | 38.739 | 666 | 340 | 15 | 1 | 640 | 1 | 624 | 3.17e-119 | 369 |
| MS.gene07888.t1 | AT1G17460 | 36.776 | 639 | 341 | 18 | 7 | 641 | 5 | 584 | 1.64e-96 | 310 |
| MS.gene07888.t1 | AT1G17460 | 36.503 | 652 | 345 | 20 | 7 | 641 | 5 | 604 | 4.07e-94 | 304 |
| MS.gene07888.t1 | AT1G17460 | 36.150 | 639 | 324 | 17 | 7 | 641 | 5 | 563 | 2.55e-93 | 300 |
| MS.gene07888.t1 | AT2G37025 | 51.064 | 94 | 45 | 1 | 546 | 638 | 288 | 381 | 1.29e-20 | 95.1 |
| MS.gene07888.t1 | AT2G37025 | 51.064 | 94 | 45 | 1 | 546 | 638 | 288 | 381 | 1.29e-20 | 95.1 |
| MS.gene07888.t1 | AT2G37025 | 51.064 | 94 | 45 | 1 | 546 | 638 | 288 | 381 | 1.29e-20 | 95.1 |
| MS.gene07888.t1 | AT3G53790 | 33.600 | 125 | 67 | 4 | 515 | 631 | 272 | 388 | 4.33e-11 | 65.9 |
Find 168 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAACTTCATGAACTGTTTA+AGG | 0.149927 | 8.3:-70775465 | MS.gene07888:CDS |
| CCCGAGTAACACAAGGAATT+TGG | 0.234511 | 8.3:+70774892 | None:intergenic |
| TTAGACTCTCTTGGAGGTTC+TGG | 0.260346 | 8.3:-70774918 | MS.gene07888:CDS |
| GAAGCTAAATGCAAAGTTTC+AGG | 0.274137 | 8.3:-70776688 | MS.gene07888:intron |
| GGCACTGCAGAGGCAGATTT+GGG | 0.280785 | 8.3:-70776711 | MS.gene07888:CDS |
| CTAAAATTGGCTCAGGAATC+GGG | 0.284289 | 8.3:+70772189 | None:intergenic |
| TCTCTCACACGTACTAAAAT+TGG | 0.292996 | 8.3:+70772176 | None:intergenic |
| AGGCACTGCAGAGGCAGATT+TGG | 0.303362 | 8.3:-70776712 | MS.gene07888:CDS |
| TGTAACCTCTGCGGAAAATA+TGG | 0.305933 | 8.3:-70775273 | MS.gene07888:CDS |
| TCCAAATTCCTTGTGTTACT+CGG | 0.328725 | 8.3:-70774893 | MS.gene07888:CDS |
| ACTAAAATTGGCTCAGGAAT+CGG | 0.332607 | 8.3:+70772188 | None:intergenic |
| AAGACTGGAAAATCTTAATA+TGG | 0.340239 | 8.3:-70775168 | MS.gene07888:CDS |
| GAACTGTTTAAGGTCACTTT+TGG | 0.340400 | 8.3:-70775455 | MS.gene07888:CDS |
| TTAGGCCTCAATTCCTGCCT+TGG | 0.347102 | 8.3:+70773446 | None:intergenic |
| CCCTCTGTGGCATGACTTGA+GGG | 0.348574 | 8.3:+70773413 | None:intergenic |
| TACCCAGGCGTTTCACAATT+AGG | 0.349710 | 8.3:-70776732 | MS.gene07888:intron |
| ATGCTATAGAATGTGCTTCC+TGG | 0.350653 | 8.3:+70775657 | None:intergenic |
| ATTACTTCATCATCTGTTGC+AGG | 0.361219 | 8.3:+70777283 | None:intergenic |
| TCAATCGAAAGATCATCTTC+TGG | 0.362969 | 8.3:-70777181 | MS.gene07888:CDS |
| TGCAGACACTGGACAGAGTA+TGG | 0.373112 | 8.3:-70777212 | MS.gene07888:CDS |
| GTGGTAAATGTTCTTGTCTC+TGG | 0.379761 | 8.3:+70774945 | None:intergenic |
| TATAGTCTTAGTAATCAATC+TGG | 0.381950 | 8.3:-70775623 | MS.gene07888:CDS |
| CGAACAAGTTTGTACGCAAC+TGG | 0.386733 | 8.3:+70779023 | None:intergenic |
| ACGGGCGAGGCTGCAAAGTT+AGG | 0.392228 | 8.3:-70774364 | MS.gene07888:CDS |
| AGCTGTCAACTTGCTTGAAC+TGG | 0.392252 | 8.3:+70772118 | None:intergenic |
| TCTGTCTGAAACTCCATTCC+AGG | 0.407475 | 8.3:-70775675 | MS.gene07888:CDS |
| GGAAACAGTTGTTGGAATTG+AGG | 0.407478 | 8.3:-70779126 | MS.gene07888:CDS |
| CCTTGTTGAGGTATTGAAAC+TGG | 0.410633 | 8.3:-70773327 | MS.gene07888:CDS |
| ACCTTCACAGGCATTGAACT+TGG | 0.414599 | 8.3:+70774277 | None:intergenic |
| TATCACTCCTCCGGAAGGTC+TGG | 0.414828 | 8.3:+70775583 | None:intergenic |
| CAGTTGCGTACAAACTTGTT+CGG | 0.416106 | 8.3:-70779022 | MS.gene07888:CDS |
| AATAAAGTCGTTAGCAATCA+TGG | 0.425285 | 8.3:-70774340 | MS.gene07888:CDS |
| GACAGATGGAGAAATATGTT+TGG | 0.426126 | 8.3:-70775504 | MS.gene07888:CDS |
| TATTCAATGGAAACAGTTGT+TGG | 0.426429 | 8.3:-70779134 | None:intergenic |
| TCAAGCAAGTTGACAGCTAA+TGG | 0.428230 | 8.3:-70772113 | MS.gene07888:CDS |
| TCAGTTGTGCCAATCATTAC+CGG | 0.432862 | 8.3:+70773470 | None:intergenic |
| TTGCTTGAACTGGAATTTGA+AGG | 0.433165 | 8.3:+70772128 | None:intergenic |
| ACCACCAGGTTAGACTCTCT+TGG | 0.437848 | 8.3:-70774927 | MS.gene07888:CDS |
| GATCAGTGTTCCAGACCTTC+CGG | 0.438443 | 8.3:-70775593 | MS.gene07888:CDS |
| CATCTTATGCCGGGCCTGCT+AGG | 0.439331 | 8.3:-70774977 | MS.gene07888:CDS |
| GATGCTGCAAAAGGTTAAAC+AGG | 0.440482 | 8.3:-70775798 | MS.gene07888:CDS |
| AGAAACTTCGCTTGTCGTCT+CGG | 0.444782 | 8.3:-70775772 | MS.gene07888:CDS |
| TTTCAGAAATTCCATCCAAC+TGG | 0.446041 | 8.3:-70774388 | MS.gene07888:intron |
| GGAATTGAGGATTATGATGA+TGG | 0.451484 | 8.3:-70779113 | MS.gene07888:CDS |
| ATCTTCTGGGAAGCTTCGAT+TGG | 0.453710 | 8.3:-70777167 | MS.gene07888:CDS |
| GGTGTGTCGCGGTGTGGACC+AGG | 0.455670 | 8.3:-70773299 | MS.gene07888:CDS |
| TGCACCGACACCTGCTGATG+AGG | 0.456445 | 8.3:-70773056 | MS.gene07888:CDS |
| GCAGCCTCGCCCGTGCCAGT+TGG | 0.456464 | 8.3:+70774373 | None:intergenic |
| CAATCGAAAGATCATCTTCT+GGG | 0.456715 | 8.3:-70777180 | MS.gene07888:CDS |
| TAAAAGTACGGGACACATAC+AGG | 0.458554 | 8.3:-70775009 | MS.gene07888:CDS |
| CGCGGTGTGGACCAGGGAGG+TGG | 0.459826 | 8.3:-70773292 | MS.gene07888:CDS |
| ACAAACAGTGGTTGAGGAGG+AGG | 0.470154 | 8.3:-70775412 | MS.gene07888:CDS |
| GATTATGATGATGGGAAGCT+TGG | 0.470512 | 8.3:-70779104 | MS.gene07888:CDS |
| GTCAAGTTCTAATAAAAGTA+CGG | 0.470595 | 8.3:-70775021 | MS.gene07888:CDS |
| GCCCTCTGTGGCATGACTTG+AGG | 0.473621 | 8.3:+70773412 | None:intergenic |
| ATGCAGTATCCGGTAATGAT+TGG | 0.476336 | 8.3:-70773479 | MS.gene07888:CDS |
| CCTCGCCCGTGCCAGTTGGA+TGG | 0.484094 | 8.3:+70774377 | None:intergenic |
| GAAAGAGAAGATGCAGTATC+CGG | 0.484129 | 8.3:-70773489 | MS.gene07888:CDS |
| CCAAATTCCTTGTGTTACTC+GGG | 0.488276 | 8.3:-70774892 | MS.gene07888:CDS |
| GAGGTATTGAAACTGGTTGA+TGG | 0.490269 | 8.3:-70773320 | MS.gene07888:CDS |
| CCATCCAACTGGCACGGGCG+AGG | 0.493525 | 8.3:-70774377 | MS.gene07888:CDS |
| GTTAATATTCCTACTGCTAA+GGG | 0.493709 | 8.3:-70773383 | MS.gene07888:CDS |
| CTCTTCAATATATCGCTTAG+TGG | 0.496612 | 8.3:+70775082 | None:intergenic |
| ATAGAATGTGCTTCCTGGAA+TGG | 0.499600 | 8.3:+70775662 | None:intergenic |
| GTCTTGTTTCAGTAGCAACT+TGG | 0.503155 | 8.3:+70775186 | None:intergenic |
| GGAAAATATGGCTGTACAAA+GGG | 0.504045 | 8.3:-70775261 | MS.gene07888:CDS |
| AGTTGCGTACAAACTTGTTC+GGG | 0.504927 | 8.3:-70779021 | MS.gene07888:intron |
| GCACCGACACCTGCTGATGA+GGG | 0.506194 | 8.3:-70773055 | MS.gene07888:CDS |
| AAGTTTGTACGCAACTGGAT+TGG | 0.506544 | 8.3:+70779028 | None:intergenic |
| AGTTAATATTCCTACTGCTA+AGG | 0.507711 | 8.3:-70773384 | MS.gene07888:CDS |
| ACCGTCTGATGAACCTTCAC+AGG | 0.512080 | 8.3:+70774265 | None:intergenic |
| ATTTGTACATGAGAATGAAC+AGG | 0.513633 | 8.3:+70775746 | None:intergenic |
| TGATATGATGTTCAGGTTGA+AGG | 0.515704 | 8.3:-70777322 | MS.gene07888:intron |
| AAATTCCATCCAACTGGCAC+GGG | 0.516476 | 8.3:-70774382 | MS.gene07888:CDS |
| GCTTCTCCAACATCTTATGC+CGG | 0.518668 | 8.3:-70774987 | MS.gene07888:CDS |
| TCTGGATAAGCATTCCTAGC+AGG | 0.519734 | 8.3:+70774963 | None:intergenic |
| CTGATCCAAGGCAGGAATTG+AGG | 0.519818 | 8.3:-70773451 | MS.gene07888:CDS |
| TATTGAACAGATGCTGCAAA+AGG | 0.522438 | 8.3:-70775807 | MS.gene07888:CDS |
| AATCTAGAGAGCAAATTCCT+AGG | 0.527590 | 8.3:-70775046 | MS.gene07888:CDS |
| ACGATGCGAGTACGAAGAAA+AGG | 0.528451 | 8.3:+70773250 | None:intergenic |
| TCAAGTTCTAATAAAAGTAC+GGG | 0.529173 | 8.3:-70775020 | MS.gene07888:CDS |
| GGAGGTGGTCTGAGATCAAA+CGG | 0.534301 | 8.3:-70773277 | MS.gene07888:CDS |
| GATGTTCAGGTTGAAGGTGA+TGG | 0.534856 | 8.3:-70777316 | MS.gene07888:intron |
| AGAACCTTCTCATTTCTGAC+AGG | 0.535005 | 8.3:+70775695 | None:intergenic |
| ATCAACTTCGCAACCACCCA+CGG | 0.535596 | 8.3:+70775214 | None:intergenic |
| ACATATTTCTCCATCTGTCA+TGG | 0.536255 | 8.3:+70775508 | None:intergenic |
| CTTCGATTGGAGTGCTCGGA+AGG | 0.537545 | 8.3:-70777154 | MS.gene07888:intron |
| CGGAAAATATGGCTGTACAA+AGG | 0.539341 | 8.3:-70775262 | MS.gene07888:CDS |
| TTGATCTCAGACCACCTCCC+TGG | 0.544021 | 8.3:+70773281 | None:intergenic |
| ACAGCTAATGGTGCAACTAA+TGG | 0.544625 | 8.3:-70772101 | MS.gene07888:CDS |
| CTTCTCCAACATCTTATGCC+GGG | 0.545399 | 8.3:-70774986 | MS.gene07888:CDS |
| TCTTCAATATATCGCTTAGT+GGG | 0.545730 | 8.3:+70775083 | None:intergenic |
| TGATGAAGTAATGGAGGTCG+AGG | 0.548266 | 8.3:-70777272 | MS.gene07888:CDS |
| CAGATGAATTCGCGGAAGCA+TGG | 0.549879 | 8.3:-70772218 | MS.gene07888:CDS |
| ACCAGGTTAGACTCTCTTGG+AGG | 0.551035 | 8.3:-70774924 | MS.gene07888:CDS |
| ACCACTTTCTATCACTCCTC+CGG | 0.551691 | 8.3:+70775574 | None:intergenic |
| AGTTGCTACTGAAACAAGAC+TGG | 0.553513 | 8.3:-70775183 | MS.gene07888:CDS |
| ACACGTACTAAAATTGGCTC+AGG | 0.556714 | 8.3:+70772182 | None:intergenic |
| GCTTATGACAGATGAATTCG+CGG | 0.558208 | 8.3:-70772226 | MS.gene07888:intron |
| CCCTCAAGTCATGCCACAGA+GGG | 0.560986 | 8.3:-70773413 | MS.gene07888:CDS |
| TTATTAGAACTTGACGACCT+AGG | 0.567947 | 8.3:+70775029 | None:intergenic |
| ATAGTCTTAGTAATCAATCT+GGG | 0.568164 | 8.3:-70775622 | MS.gene07888:CDS |
| ATTTCCTGTCAGAAATGAGA+AGG | 0.570033 | 8.3:-70775699 | MS.gene07888:CDS |
| GAAATTCCATCCAACTGGCA+CGG | 0.574444 | 8.3:-70774383 | MS.gene07888:CDS |
| TTGCTTTGCAGGACAAGTGG+AGG | 0.574686 | 8.3:-70773099 | MS.gene07888:intron |
| ATGCGTGTTGTTGCAGACAC+TGG | 0.574854 | 8.3:-70777223 | MS.gene07888:CDS |
| GCCAAGTTCAATGCCTGTGA+AGG | 0.575095 | 8.3:-70774278 | MS.gene07888:CDS |
| GCAGGCCCGGCATAAGATGT+TGG | 0.575446 | 8.3:+70774981 | None:intergenic |
| GTATAATGATTCAAAAGCCG+TGG | 0.575963 | 8.3:-70775231 | MS.gene07888:CDS |
| TCGTACCTCTGTTGATCTCA+AGG | 0.576997 | 8.3:-70773231 | MS.gene07888:intron |
| ACTGGATTGGAAATCCGCTT+CGG | 0.578592 | 8.3:+70779041 | None:intergenic |
| ATGTTCAGGTTGAAGGTGAT+GGG | 0.579628 | 8.3:-70777315 | MS.gene07888:intron |
| GGAACATGAATTAGAAGATG+AGG | 0.581860 | 8.3:-70775147 | MS.gene07888:CDS |
| TGATGCTGATAGTGAAATTG+AGG | 0.581949 | 8.3:-70774314 | MS.gene07888:CDS |
| GCCTGTGAAGGTTCATCAGA+CGG | 0.582544 | 8.3:-70774266 | MS.gene07888:intron |
| GAAATTTATCAGCAGAACAC+TGG | 0.582582 | 8.3:+70775717 | None:intergenic |
| GTGTGTCGCGGTGTGGACCA+GGG | 0.582938 | 8.3:-70773298 | MS.gene07888:CDS |
| TGGCACAACTGATCCAAGGC+AGG | 0.586281 | 8.3:-70773459 | MS.gene07888:CDS |
| ATGGGAAGCTTGGAGACAGT+GGG | 0.587778 | 8.3:-70779094 | MS.gene07888:CDS |
| TGCAACAGATGATGAAGTAA+TGG | 0.588284 | 8.3:-70777281 | MS.gene07888:CDS |
| ATAAGCATTCCTAGCAGGCC+CGG | 0.588525 | 8.3:+70774968 | None:intergenic |
| GGAGGAAGCATCATCGAGCA+TGG | 0.588802 | 8.3:-70773352 | MS.gene07888:CDS |
| TGAAAGACAAACAGTGGTTG+AGG | 0.593919 | 8.3:-70775418 | MS.gene07888:CDS |
| TCCGGAGGAGTGATAGAAAG+TGG | 0.595035 | 8.3:-70775575 | MS.gene07888:CDS |
| AATGGTGCAAGGAGTATGCA+TGG | 0.595350 | 8.3:-70772083 | MS.gene07888:CDS |
| GAAGCTTCGATTGGAGTGCT+CGG | 0.603127 | 8.3:-70777158 | MS.gene07888:CDS |
| ATGCTTTGTCTTCACCGAAG+CGG | 0.604040 | 8.3:-70779055 | MS.gene07888:CDS |
| GAATTGAGGATTATGATGAT+GGG | 0.607731 | 8.3:-70779112 | MS.gene07888:CDS |
| CTCATTCCACCCTTAGCAGT+AGG | 0.609420 | 8.3:+70773374 | None:intergenic |
| AGTATGCATGGAGACAGAGT+GGG | 0.611165 | 8.3:-70772071 | MS.gene07888:CDS |
| GTTGATGGTGTGTCGCGGTG+TGG | 0.617079 | 8.3:-70773305 | MS.gene07888:CDS |
| ACCGACACCTGCTGATGAGG+GGG | 0.617146 | 8.3:-70773053 | MS.gene07888:intron |
| TCGAGCATGGACCCTTGTTG+AGG | 0.624113 | 8.3:-70773339 | MS.gene07888:CDS |
| TTCACAATTAGGCACTGCAG+AGG | 0.626200 | 8.3:-70776721 | MS.gene07888:CDS |
| CTTTCTATCACTCCTCCGGA+AGG | 0.629182 | 8.3:+70775578 | None:intergenic |
| TTCAGGTTGAAGGTGATGGG+AGG | 0.629250 | 8.3:-70777312 | MS.gene07888:intron |
| CCAGTTTCAATACCTCAACA+AGG | 0.630743 | 8.3:+70773327 | None:intergenic |
| CACCGACACCTGCTGATGAG+GGG | 0.630947 | 8.3:-70773054 | MS.gene07888:CDS |
| CTGCTAAGGGTGGAATGAGG+AGG | 0.632543 | 8.3:-70773370 | MS.gene07888:CDS |
| AGACAAGAACATTTACCACC+AGG | 0.632627 | 8.3:-70774941 | MS.gene07888:CDS |
| GAGTATGCATGGAGACAGAG+TGG | 0.634281 | 8.3:-70772072 | MS.gene07888:CDS |
| TAAAATTGGCTCAGGAATCG+GGG | 0.636315 | 8.3:+70772190 | None:intergenic |
| TGATTGGCACAACTGATCCA+AGG | 0.638247 | 8.3:-70773463 | MS.gene07888:CDS |
| CTTCGCACCCGAGTAACACA+AGG | 0.639559 | 8.3:+70774885 | None:intergenic |
| ACCTCCAAGAGAGTCTAACC+TGG | 0.641656 | 8.3:+70774923 | None:intergenic |
| CTACTGCTAAGGGTGGAATG+AGG | 0.643884 | 8.3:-70773373 | MS.gene07888:CDS |
| ATTAACTATATTGCCCTCTG+TGG | 0.645795 | 8.3:+70773400 | None:intergenic |
| ATGGTGCAACTAATGGTGCA+AGG | 0.647506 | 8.3:-70772094 | MS.gene07888:CDS |
| GCACTGCAGAGGCAGATTTG+GGG | 0.651789 | 8.3:-70776710 | MS.gene07888:CDS |
| TATAATGATTCAAAAGCCGT+GGG | 0.654536 | 8.3:-70775230 | MS.gene07888:CDS |
| AAGACAAACAGTGGTTGAGG+AGG | 0.656203 | 8.3:-70775415 | MS.gene07888:CDS |
| GGGTGCGAAGAAGTCGTCCA+CGG | 0.656929 | 8.3:-70774872 | MS.gene07888:CDS |
| AACTGGTTGATGGTGTGTCG+CGG | 0.661368 | 8.3:-70773310 | MS.gene07888:CDS |
| AATATTCCTACTGCTAAGGG+TGG | 0.661873 | 8.3:-70773380 | MS.gene07888:CDS |
| CAAAGCGGAATTGACAGCAG+AGG | 0.662074 | 8.3:+70775544 | None:intergenic |
| GATGGGAAGCTTGGAGACAG+TGG | 0.663251 | 8.3:-70779095 | MS.gene07888:CDS |
| AACAGATGATGAAGTAATGG+AGG | 0.663256 | 8.3:-70777278 | MS.gene07888:CDS |
| AATGATTCAAAAGCCGTGGG+TGG | 0.666719 | 8.3:-70775227 | MS.gene07888:CDS |
| CTACTGTGAAAGACAAACAG+TGG | 0.669591 | 8.3:-70775424 | MS.gene07888:CDS |
| TCCCTCAAGTCATGCCACAG+AGG | 0.700875 | 8.3:-70773414 | MS.gene07888:CDS |
| TCCAAGAGAGTCTAACCTGG+TGG | 0.701922 | 8.3:+70774926 | None:intergenic |
| TGCTGCAGCTGTAACCTCTG+CGG | 0.706466 | 8.3:-70775282 | MS.gene07888:CDS |
| GTATGCATGGAGACAGAGTG+GGG | 0.706825 | 8.3:-70772070 | MS.gene07888:CDS |
| CAGTGTTCCAGACCTTCCGG+AGG | 0.711228 | 8.3:-70775590 | MS.gene07888:CDS |
| TGTCGCGGTGTGGACCAGGG+AGG | 0.718246 | 8.3:-70773295 | MS.gene07888:CDS |
| GAGTACCTTGAGATCAACAG+AGG | 0.719395 | 8.3:+70773226 | None:intergenic |
| CAGTTTCAATACCTCAACAA+GGG | 0.719688 | 8.3:+70773328 | None:intergenic |
| AATTGGCTCAGGAATCGGGG+CGG | 0.743933 | 8.3:+70772193 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 70772061 | 70779150 | 70772061 | ID=MS.gene07888 |
| chr8.3 | mRNA | 70772061 | 70779150 | 70772061 | ID=MS.gene07888.t1;Parent=MS.gene07888 |
| chr8.3 | exon | 70779022 | 70779150 | 70779022 | ID=MS.gene07888.t1.exon1;Parent=MS.gene07888.t1 |
| chr8.3 | CDS | 70779022 | 70779150 | 70779022 | ID=cds.MS.gene07888.t1;Parent=MS.gene07888.t1 |
| chr8.3 | exon | 70777155 | 70777329 | 70777155 | ID=MS.gene07888.t1.exon2;Parent=MS.gene07888.t1 |
| chr8.3 | CDS | 70777155 | 70777329 | 70777155 | ID=cds.MS.gene07888.t1;Parent=MS.gene07888.t1 |
| chr8.3 | exon | 70776689 | 70776747 | 70776689 | ID=MS.gene07888.t1.exon3;Parent=MS.gene07888.t1 |
| chr8.3 | CDS | 70776689 | 70776747 | 70776689 | ID=cds.MS.gene07888.t1;Parent=MS.gene07888.t1 |
| chr8.3 | exon | 70774851 | 70775831 | 70774851 | ID=MS.gene07888.t1.exon4;Parent=MS.gene07888.t1 |
| chr8.3 | CDS | 70774851 | 70775831 | 70774851 | ID=cds.MS.gene07888.t1;Parent=MS.gene07888.t1 |
| chr8.3 | exon | 70774267 | 70774404 | 70774267 | ID=MS.gene07888.t1.exon5;Parent=MS.gene07888.t1 |
| chr8.3 | CDS | 70774267 | 70774404 | 70774267 | ID=cds.MS.gene07888.t1;Parent=MS.gene07888.t1 |
| chr8.3 | exon | 70773232 | 70773528 | 70773232 | ID=MS.gene07888.t1.exon6;Parent=MS.gene07888.t1 |
| chr8.3 | CDS | 70773232 | 70773528 | 70773232 | ID=cds.MS.gene07888.t1;Parent=MS.gene07888.t1 |
| chr8.3 | exon | 70773054 | 70773110 | 70773054 | ID=MS.gene07888.t1.exon7;Parent=MS.gene07888.t1 |
| chr8.3 | CDS | 70773054 | 70773110 | 70773054 | ID=cds.MS.gene07888.t1;Parent=MS.gene07888.t1 |
| chr8.3 | exon | 70772061 | 70772237 | 70772061 | ID=MS.gene07888.t1.exon8;Parent=MS.gene07888.t1 |
| chr8.3 | CDS | 70772061 | 70772237 | 70772061 | ID=cds.MS.gene07888.t1;Parent=MS.gene07888.t1 |
| Gene Sequence |
| Protein sequence |
