Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30363.t1 | XP_013444440.1 | 97.3 | 670 | 15 | 1 | 1 | 670 | 1 | 667 | 0.00E+00 | 1253.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30363.t1 | Q9LL45 | 33.8 | 142 | 74 | 5 | 497 | 631 | 479 | 607 | 1.5e-09 | 66.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30363.t1 | A0A072TY48 | 97.3 | 670 | 15 | 1 | 1 | 670 | 1 | 667 | 0.0e+00 | 1253.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene30363.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene011302 | MS.gene30363 | PPI |
| MS.gene07888 | MS.gene30363 | PPI |
| MS.gene30363 | MS.gene25156 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30363.t1 | MTR_8g020330 | 97.313 | 670 | 15 | 1 | 1 | 670 | 1 | 667 | 0.0 | 1345 |
| MS.gene30363.t1 | MTR_8g020330 | 96.716 | 670 | 15 | 2 | 1 | 670 | 1 | 663 | 0.0 | 1329 |
| MS.gene30363.t1 | MTR_8g020330 | 96.567 | 670 | 15 | 2 | 1 | 670 | 1 | 662 | 0.0 | 1328 |
| MS.gene30363.t1 | MTR_8g020330 | 95.970 | 670 | 15 | 3 | 1 | 670 | 1 | 658 | 0.0 | 1313 |
| MS.gene30363.t1 | MTR_8g020330 | 96.796 | 593 | 11 | 2 | 1 | 593 | 1 | 585 | 0.0 | 1176 |
| MS.gene30363.t1 | MTR_1g063940 | 35.714 | 154 | 93 | 4 | 515 | 666 | 305 | 454 | 2.40e-18 | 89.0 |
| MS.gene30363.t1 | MTR_1g063940 | 35.484 | 155 | 93 | 5 | 515 | 666 | 305 | 455 | 5.34e-18 | 87.8 |
| MS.gene30363.t1 | MTR_1g063940 | 35.484 | 155 | 93 | 5 | 515 | 666 | 313 | 463 | 6.44e-18 | 87.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30363.t1 | AT1G72650 | 38.152 | 671 | 343 | 15 | 1 | 640 | 1 | 630 | 9.61e-119 | 368 |
| MS.gene30363.t1 | AT1G72650 | 38.589 | 666 | 341 | 15 | 1 | 640 | 1 | 624 | 1.91e-118 | 367 |
| MS.gene30363.t1 | AT1G17460 | 36.776 | 639 | 341 | 18 | 7 | 641 | 5 | 584 | 5.18e-96 | 308 |
| MS.gene30363.t1 | AT1G17460 | 36.503 | 652 | 345 | 20 | 7 | 641 | 5 | 604 | 3.00e-94 | 304 |
| MS.gene30363.t1 | AT1G17460 | 36.150 | 639 | 324 | 17 | 7 | 641 | 5 | 563 | 4.19e-93 | 300 |
| MS.gene30363.t1 | AT2G37025 | 51.064 | 94 | 45 | 1 | 546 | 638 | 288 | 381 | 1.22e-20 | 95.5 |
| MS.gene30363.t1 | AT2G37025 | 51.064 | 94 | 45 | 1 | 546 | 638 | 288 | 381 | 1.22e-20 | 95.5 |
| MS.gene30363.t1 | AT2G37025 | 51.064 | 94 | 45 | 1 | 546 | 638 | 288 | 381 | 1.22e-20 | 95.5 |
| MS.gene30363.t1 | AT3G53790 | 33.600 | 125 | 67 | 4 | 515 | 631 | 272 | 388 | 4.18e-11 | 65.9 |
Find 169 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAACTTCATGAACTGTTTA+AGG | 0.149927 | 8.1:-78993050 | MS.gene30363:CDS |
| CCCGAGTAACACAAGGAATT+TGG | 0.234511 | 8.1:+78992477 | None:intergenic |
| TTAGACTCTCTTGGAGGTTC+TGG | 0.260346 | 8.1:-78992503 | MS.gene30363:CDS |
| GAAGCTAAATGCAAAGTTTC+AGG | 0.274137 | 8.1:-78994274 | MS.gene30363:intron |
| GGCACTGCAGAGGCAGATTT+GGG | 0.280785 | 8.1:-78994297 | MS.gene30363:CDS |
| CTAAAATTGGCTCAGGAATC+GGG | 0.284289 | 8.1:+78989774 | None:intergenic |
| TCTCTCACACGTACTAAAAT+TGG | 0.292996 | 8.1:+78989761 | None:intergenic |
| AGGCACTGCAGAGGCAGATT+TGG | 0.303362 | 8.1:-78994298 | MS.gene30363:CDS |
| TGTAACCTCTGCGGAAAATA+TGG | 0.305933 | 8.1:-78992858 | MS.gene30363:CDS |
| TCCAAATTCCTTGTGTTACT+CGG | 0.328725 | 8.1:-78992478 | MS.gene30363:CDS |
| ACTAAAATTGGCTCAGGAAT+CGG | 0.332607 | 8.1:+78989773 | None:intergenic |
| AAGACTGGAAAATCTTAATA+TGG | 0.340239 | 8.1:-78992753 | MS.gene30363:CDS |
| GAACTGTTTAAGGTCACTTT+TGG | 0.340400 | 8.1:-78993040 | MS.gene30363:CDS |
| TTAGGCCTCAATTCCTGCCT+TGG | 0.347102 | 8.1:+78991031 | None:intergenic |
| CCCTCTGTGGCATGACTTGA+GGG | 0.348574 | 8.1:+78990998 | None:intergenic |
| TACCCAGGCGTTTCACAATT+AGG | 0.349710 | 8.1:-78994318 | MS.gene30363:intron |
| ATGCTATAGAATGTGCTTCC+TGG | 0.350653 | 8.1:+78993242 | None:intergenic |
| ATTACTTCATCATCTGTTGC+AGG | 0.361219 | 8.1:+78994869 | None:intergenic |
| TCAATCGAAAGATCATCTTC+TGG | 0.362969 | 8.1:-78994767 | MS.gene30363:CDS |
| TGCAGACACTGGACAGAGTA+TGG | 0.373112 | 8.1:-78994798 | MS.gene30363:CDS |
| GTGGTAAATGTTCTTGTCTC+TGG | 0.379761 | 8.1:+78992530 | None:intergenic |
| TATAGTCTTAGTAATCAATC+TGG | 0.381950 | 8.1:-78993208 | MS.gene30363:CDS |
| CGAACAAGTTTGTACACAAC+TGG | 0.389839 | 8.1:+78996613 | None:intergenic |
| ACGGGCGAGGCTGCAAAGTT+AGG | 0.392228 | 8.1:-78991949 | MS.gene30363:CDS |
| AGCTGTCAACTTGCTTGAAC+TGG | 0.392252 | 8.1:+78989703 | None:intergenic |
| TCTGTCTGAAACTCCATTCC+AGG | 0.407475 | 8.1:-78993260 | MS.gene30363:CDS |
| GGAAACAGTTGTTGGAATTG+AGG | 0.407478 | 8.1:-78996716 | MS.gene30363:CDS |
| CCTTGTTGAGGTATTGAAAC+TGG | 0.410633 | 8.1:-78990912 | MS.gene30363:CDS |
| CAGTTGTGTACAAACTTGTT+CGG | 0.413667 | 8.1:-78996612 | MS.gene30363:CDS |
| ACCTTCACAGGCATTGAACT+TGG | 0.414599 | 8.1:+78991862 | None:intergenic |
| TATCACTCCTCCGGAAGGTC+TGG | 0.414828 | 8.1:+78993168 | None:intergenic |
| AATAAAGTCGTTAGCAATCA+TGG | 0.425285 | 8.1:-78991925 | MS.gene30363:CDS |
| GACAGATGGAGAAATATGTT+TGG | 0.426126 | 8.1:-78993089 | MS.gene30363:CDS |
| TATTCAATGGAAACAGTTGT+TGG | 0.426429 | 8.1:-78996724 | None:intergenic |
| TCAAGCAAGTTGACAGCTAA+TGG | 0.428230 | 8.1:-78989698 | MS.gene30363:CDS |
| CTGTCTCCATGCATACTCCT+TGG | 0.430097 | 8.1:+78989662 | None:intergenic |
| TCAGTTGTGCCAATCATTAC+CGG | 0.432862 | 8.1:+78991055 | None:intergenic |
| TTGCTTGAACTGGAATTTGA+AGG | 0.433165 | 8.1:+78989713 | None:intergenic |
| ACCACCAGGTTAGACTCTCT+TGG | 0.437848 | 8.1:-78992512 | MS.gene30363:CDS |
| GATCAGTGTTCCAGACCTTC+CGG | 0.438443 | 8.1:-78993178 | MS.gene30363:CDS |
| CATCTTATGCCGGGCCTGCT+AGG | 0.439331 | 8.1:-78992562 | MS.gene30363:CDS |
| GATGCTGCAAAAGGTTAAAC+AGG | 0.440482 | 8.1:-78993383 | MS.gene30363:CDS |
| AGAAACTTCGCTTGTCGTCT+CGG | 0.444782 | 8.1:-78993357 | MS.gene30363:CDS |
| TTTCAGAAATTCCATCCAAC+TGG | 0.446041 | 8.1:-78991973 | MS.gene30363:intron |
| GGAATTGAGGATTATGATGA+TGG | 0.451484 | 8.1:-78996703 | MS.gene30363:CDS |
| ATCTTCTGGGAAGCTTCGAT+TGG | 0.453710 | 8.1:-78994753 | MS.gene30363:CDS |
| GGTGTGTCGCGGTGTGGACC+AGG | 0.455670 | 8.1:-78990884 | MS.gene30363:CDS |
| TGCACCGACACCTGCTGATG+AGG | 0.456445 | 8.1:-78990641 | MS.gene30363:CDS |
| GCAGCCTCGCCCGTGCCAGT+TGG | 0.456464 | 8.1:+78991958 | None:intergenic |
| CAATCGAAAGATCATCTTCT+GGG | 0.456715 | 8.1:-78994766 | MS.gene30363:CDS |
| TAAAAGTACGGGACACATAC+AGG | 0.458554 | 8.1:-78992594 | MS.gene30363:CDS |
| CGCGGTGTGGACCAGGGAGG+TGG | 0.459826 | 8.1:-78990877 | MS.gene30363:CDS |
| ACAAACAGTGGTTGAGGAGG+AGG | 0.470154 | 8.1:-78992997 | MS.gene30363:CDS |
| GATTATGATGATGGGAAGCT+TGG | 0.470512 | 8.1:-78996694 | MS.gene30363:CDS |
| GTCAAGTTCTAATAAAAGTA+CGG | 0.470595 | 8.1:-78992606 | MS.gene30363:CDS |
| GCCCTCTGTGGCATGACTTG+AGG | 0.473621 | 8.1:+78990997 | None:intergenic |
| ATGCAGTATCCGGTAATGAT+TGG | 0.476336 | 8.1:-78991064 | MS.gene30363:CDS |
| CCTCGCCCGTGCCAGTTGGA+TGG | 0.484094 | 8.1:+78991962 | None:intergenic |
| GAAAGAGAAGATGCAGTATC+CGG | 0.484129 | 8.1:-78991074 | MS.gene30363:CDS |
| AGTTGTGTACAAACTTGTTC+GGG | 0.487495 | 8.1:-78996611 | MS.gene30363:intron |
| ACAGCTAATGGTGCAACTAA+TGG | 0.487520 | 8.1:-78989686 | MS.gene30363:CDS |
| CCAAATTCCTTGTGTTACTC+GGG | 0.488276 | 8.1:-78992477 | MS.gene30363:CDS |
| GAGGTATTGAAACTGGTTGA+TGG | 0.490269 | 8.1:-78990905 | MS.gene30363:CDS |
| CCATCCAACTGGCACGGGCG+AGG | 0.493525 | 8.1:-78991962 | MS.gene30363:CDS |
| GTTAATATTCCTACTGCTAA+GGG | 0.493709 | 8.1:-78990968 | MS.gene30363:CDS |
| CTCTTCAATATATCGCTTAG+TGG | 0.496612 | 8.1:+78992667 | None:intergenic |
| ATAGAATGTGCTTCCTGGAA+TGG | 0.499600 | 8.1:+78993247 | None:intergenic |
| GTCTTGTTTCAGTAGCAACT+TGG | 0.503155 | 8.1:+78992771 | None:intergenic |
| GGAAAATATGGCTGTACAAA+GGG | 0.504045 | 8.1:-78992846 | MS.gene30363:CDS |
| GCACCGACACCTGCTGATGA+GGG | 0.506194 | 8.1:-78990640 | MS.gene30363:CDS |
| AGTTAATATTCCTACTGCTA+AGG | 0.507711 | 8.1:-78990969 | MS.gene30363:CDS |
| ACCGTCTGATGAACCTTCAC+AGG | 0.512080 | 8.1:+78991850 | None:intergenic |
| ATTTGTACATGAGAATGAAC+AGG | 0.513633 | 8.1:+78993331 | None:intergenic |
| TGATATGATGTTCAGGTTGA+AGG | 0.515704 | 8.1:-78994908 | MS.gene30363:intron |
| AAATTCCATCCAACTGGCAC+GGG | 0.516476 | 8.1:-78991967 | MS.gene30363:CDS |
| GCTTCTCCAACATCTTATGC+CGG | 0.518668 | 8.1:-78992572 | MS.gene30363:CDS |
| TCTGGATAAGCATTCCTAGC+AGG | 0.519734 | 8.1:+78992548 | None:intergenic |
| CTGATCCAAGGCAGGAATTG+AGG | 0.519818 | 8.1:-78991036 | MS.gene30363:CDS |
| TATTGAACAGATGCTGCAAA+AGG | 0.522438 | 8.1:-78993392 | MS.gene30363:CDS |
| ACGATGTGAGTACGAAGAAA+AGG | 0.527449 | 8.1:+78990835 | None:intergenic |
| AATCTAGAGAGCAAATTCCT+AGG | 0.527590 | 8.1:-78992631 | MS.gene30363:CDS |
| TCAAGTTCTAATAAAAGTAC+GGG | 0.529173 | 8.1:-78992605 | MS.gene30363:CDS |
| AAGTTTGTACACAACTGGAT+TGG | 0.533387 | 8.1:+78996618 | None:intergenic |
| GGAGGTGGTCTGAGATCAAA+CGG | 0.534301 | 8.1:-78990862 | MS.gene30363:CDS |
| GATGTTCAGGTTGAAGGTGA+TGG | 0.534856 | 8.1:-78994902 | MS.gene30363:intron |
| AGAACCTTCTCATTTCTGAC+AGG | 0.535005 | 8.1:+78993280 | None:intergenic |
| ATCAACTTCGCAACCACCCA+CGG | 0.535596 | 8.1:+78992799 | None:intergenic |
| ACATATTTCTCCATCTGTCA+TGG | 0.536255 | 8.1:+78993093 | None:intergenic |
| CTTCGATTGGAGTGCTCGGA+AGG | 0.537545 | 8.1:-78994740 | MS.gene30363:intron |
| CGGAAAATATGGCTGTACAA+AGG | 0.539341 | 8.1:-78992847 | MS.gene30363:CDS |
| TTGATCTCAGACCACCTCCC+TGG | 0.544021 | 8.1:+78990866 | None:intergenic |
| CTTCTCCAACATCTTATGCC+GGG | 0.545399 | 8.1:-78992571 | MS.gene30363:CDS |
| TCTTCAATATATCGCTTAGT+GGG | 0.545730 | 8.1:+78992668 | None:intergenic |
| TGATGAAGTAATGGAGGTCG+AGG | 0.548266 | 8.1:-78994858 | MS.gene30363:CDS |
| CAGATGAATTCGCGGAAGCA+TGG | 0.549879 | 8.1:-78989803 | MS.gene30363:CDS |
| ACCAGGTTAGACTCTCTTGG+AGG | 0.551035 | 8.1:-78992509 | MS.gene30363:CDS |
| ACCACTTTCTATCACTCCTC+CGG | 0.551691 | 8.1:+78993159 | None:intergenic |
| AGTTGCTACTGAAACAAGAC+TGG | 0.553513 | 8.1:-78992768 | MS.gene30363:CDS |
| ACACGTACTAAAATTGGCTC+AGG | 0.556714 | 8.1:+78989767 | None:intergenic |
| GCTTATGACAGATGAATTCG+CGG | 0.558208 | 8.1:-78989811 | MS.gene30363:intron |
| CCCTCAAGTCATGCCACAGA+GGG | 0.560986 | 8.1:-78990998 | MS.gene30363:CDS |
| TTATTAGAACTTGACGACCT+AGG | 0.567947 | 8.1:+78992614 | None:intergenic |
| ATAGTCTTAGTAATCAATCT+GGG | 0.568164 | 8.1:-78993207 | MS.gene30363:CDS |
| ACTGGATTGGAAATCCGCTT+CGG | 0.568642 | 8.1:+78996631 | None:intergenic |
| ATTTCCTGTCAGAAATGAGA+AGG | 0.570033 | 8.1:-78993284 | MS.gene30363:CDS |
| GAAATTCCATCCAACTGGCA+CGG | 0.574444 | 8.1:-78991968 | MS.gene30363:CDS |
| TTGCTTTGCAGGACAAGTGG+AGG | 0.574686 | 8.1:-78990684 | MS.gene30363:intron |
| ATGCGTGTTGTTGCAGACAC+TGG | 0.574854 | 8.1:-78994809 | MS.gene30363:CDS |
| GCCAAGTTCAATGCCTGTGA+AGG | 0.575095 | 8.1:-78991863 | MS.gene30363:CDS |
| GCAGGCCCGGCATAAGATGT+TGG | 0.575446 | 8.1:+78992566 | None:intergenic |
| GTATAATGATTCAAAAGCCG+TGG | 0.575963 | 8.1:-78992816 | MS.gene30363:CDS |
| ATGTTCAGGTTGAAGGTGAT+GGG | 0.579628 | 8.1:-78994901 | MS.gene30363:intron |
| GGAACATGAATTAGAAGATG+AGG | 0.581860 | 8.1:-78992732 | MS.gene30363:CDS |
| TGATGCTGATAGTGAAATTG+AGG | 0.581949 | 8.1:-78991899 | MS.gene30363:CDS |
| GCCTGTGAAGGTTCATCAGA+CGG | 0.582544 | 8.1:-78991851 | MS.gene30363:intron |
| GAAATTTATCAGCAGAACAC+TGG | 0.582582 | 8.1:+78993302 | None:intergenic |
| GTGTGTCGCGGTGTGGACCA+GGG | 0.582938 | 8.1:-78990883 | MS.gene30363:CDS |
| TGGCACAACTGATCCAAGGC+AGG | 0.586281 | 8.1:-78991044 | MS.gene30363:CDS |
| ATGGGAAGCTTGGAGACAGT+GGG | 0.587778 | 8.1:-78996684 | MS.gene30363:CDS |
| TGCAACAGATGATGAAGTAA+TGG | 0.588284 | 8.1:-78994867 | MS.gene30363:CDS |
| ATAAGCATTCCTAGCAGGCC+CGG | 0.588525 | 8.1:+78992553 | None:intergenic |
| GGAGGAAGCATCATCGAGCA+TGG | 0.588802 | 8.1:-78990937 | MS.gene30363:CDS |
| TCGTACCTCTGTTGATCTCA+AGG | 0.591435 | 8.1:-78990816 | MS.gene30363:intron |
| TGAAAGACAAACAGTGGTTG+AGG | 0.593919 | 8.1:-78993003 | MS.gene30363:CDS |
| TCCGGAGGAGTGATAGAAAG+TGG | 0.595035 | 8.1:-78993160 | MS.gene30363:CDS |
| AATGGTCCAAGGAGTATGCA+TGG | 0.595350 | 8.1:-78989668 | MS.gene30363:CDS |
| GAAGCTTCGATTGGAGTGCT+CGG | 0.603127 | 8.1:-78994744 | MS.gene30363:CDS |
| ATGCTTTGTCTTCACCGAAG+CGG | 0.604040 | 8.1:-78996645 | MS.gene30363:CDS |
| GAATTGAGGATTATGATGAT+GGG | 0.607731 | 8.1:-78996702 | MS.gene30363:CDS |
| CTCATTCCACCCTTAGCAGT+AGG | 0.609420 | 8.1:+78990959 | None:intergenic |
| AGTATGCATGGAGACAGAGT+GGG | 0.611165 | 8.1:-78989656 | MS.gene30363:CDS |
| GTTGATGGTGTGTCGCGGTG+TGG | 0.617079 | 8.1:-78990890 | MS.gene30363:CDS |
| ACCGACACCTGCTGATGAGG+GGG | 0.617146 | 8.1:-78990638 | MS.gene30363:intron |
| TCGAGCATGGACCCTTGTTG+AGG | 0.624113 | 8.1:-78990924 | MS.gene30363:CDS |
| TTCACAATTAGGCACTGCAG+AGG | 0.626200 | 8.1:-78994307 | MS.gene30363:CDS |
| CTTTCTATCACTCCTCCGGA+AGG | 0.629182 | 8.1:+78993163 | None:intergenic |
| TTCAGGTTGAAGGTGATGGG+AGG | 0.629250 | 8.1:-78994898 | MS.gene30363:intron |
| CCAGTTTCAATACCTCAACA+AGG | 0.630743 | 8.1:+78990912 | None:intergenic |
| CACCGACACCTGCTGATGAG+GGG | 0.630947 | 8.1:-78990639 | MS.gene30363:CDS |
| CTGCTAAGGGTGGAATGAGG+AGG | 0.632543 | 8.1:-78990955 | MS.gene30363:CDS |
| AGACAAGAACATTTACCACC+AGG | 0.632627 | 8.1:-78992526 | MS.gene30363:CDS |
| GAGTATGCATGGAGACAGAG+TGG | 0.634281 | 8.1:-78989657 | MS.gene30363:CDS |
| TAAAATTGGCTCAGGAATCG+GGG | 0.636315 | 8.1:+78989775 | None:intergenic |
| TGATTGGCACAACTGATCCA+AGG | 0.638247 | 8.1:-78991048 | MS.gene30363:CDS |
| ATGGTGCAACTAATGGTCCA+AGG | 0.639365 | 8.1:-78989679 | MS.gene30363:CDS |
| CTTCGCACCCGAGTAACACA+AGG | 0.639559 | 8.1:+78992470 | None:intergenic |
| ACCTCCAAGAGAGTCTAACC+TGG | 0.641656 | 8.1:+78992508 | None:intergenic |
| CTACTGCTAAGGGTGGAATG+AGG | 0.643884 | 8.1:-78990958 | MS.gene30363:CDS |
| ATTAACTATATTGCCCTCTG+TGG | 0.645795 | 8.1:+78990985 | None:intergenic |
| GCACTGCAGAGGCAGATTTG+GGG | 0.651789 | 8.1:-78994296 | MS.gene30363:CDS |
| TATAATGATTCAAAAGCCGT+GGG | 0.654536 | 8.1:-78992815 | MS.gene30363:CDS |
| AAGACAAACAGTGGTTGAGG+AGG | 0.656203 | 8.1:-78993000 | MS.gene30363:CDS |
| GGGTGCGAAGAAGTCGTCCA+CGG | 0.656929 | 8.1:-78992457 | MS.gene30363:CDS |
| AACTGGTTGATGGTGTGTCG+CGG | 0.661368 | 8.1:-78990895 | MS.gene30363:CDS |
| AATATTCCTACTGCTAAGGG+TGG | 0.661873 | 8.1:-78990965 | MS.gene30363:CDS |
| CAAAGCGGAATTGACAGCAG+AGG | 0.662074 | 8.1:+78993129 | None:intergenic |
| GATGGGAAGCTTGGAGACAG+TGG | 0.663251 | 8.1:-78996685 | MS.gene30363:CDS |
| AACAGATGATGAAGTAATGG+AGG | 0.663256 | 8.1:-78994864 | MS.gene30363:CDS |
| AATGATTCAAAAGCCGTGGG+TGG | 0.666719 | 8.1:-78992812 | MS.gene30363:CDS |
| CTACTGTGAAAGACAAACAG+TGG | 0.669591 | 8.1:-78993009 | MS.gene30363:CDS |
| TCCCTCAAGTCATGCCACAG+AGG | 0.700875 | 8.1:-78990999 | MS.gene30363:CDS |
| TCCAAGAGAGTCTAACCTGG+TGG | 0.701922 | 8.1:+78992511 | None:intergenic |
| TGCTGCAGCTGTAACCTCTG+CGG | 0.706466 | 8.1:-78992867 | MS.gene30363:CDS |
| GTATGCATGGAGACAGAGTG+GGG | 0.706825 | 8.1:-78989655 | MS.gene30363:CDS |
| CAGTGTTCCAGACCTTCCGG+AGG | 0.711228 | 8.1:-78993175 | MS.gene30363:CDS |
| TGTCGCGGTGTGGACCAGGG+AGG | 0.718246 | 8.1:-78990880 | MS.gene30363:CDS |
| GAGTACCTTGAGATCAACAG+AGG | 0.719395 | 8.1:+78990811 | None:intergenic |
| CAGTTTCAATACCTCAACAA+GGG | 0.719688 | 8.1:+78990913 | None:intergenic |
| AATTGGCTCAGGAATCGGGG+CGG | 0.743933 | 8.1:+78989778 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 78989646 | 78996740 | 78989646 | ID=MS.gene30363 |
| chr8.1 | mRNA | 78989646 | 78996740 | 78989646 | ID=MS.gene30363.t1;Parent=MS.gene30363 |
| chr8.1 | exon | 78996612 | 78996740 | 78996612 | ID=MS.gene30363.t1.exon1;Parent=MS.gene30363.t1 |
| chr8.1 | CDS | 78996612 | 78996740 | 78996612 | ID=cds.MS.gene30363.t1;Parent=MS.gene30363.t1 |
| chr8.1 | exon | 78994741 | 78994915 | 78994741 | ID=MS.gene30363.t1.exon2;Parent=MS.gene30363.t1 |
| chr8.1 | CDS | 78994741 | 78994915 | 78994741 | ID=cds.MS.gene30363.t1;Parent=MS.gene30363.t1 |
| chr8.1 | exon | 78994275 | 78994333 | 78994275 | ID=MS.gene30363.t1.exon3;Parent=MS.gene30363.t1 |
| chr8.1 | CDS | 78994275 | 78994333 | 78994275 | ID=cds.MS.gene30363.t1;Parent=MS.gene30363.t1 |
| chr8.1 | exon | 78992436 | 78993416 | 78992436 | ID=MS.gene30363.t1.exon4;Parent=MS.gene30363.t1 |
| chr8.1 | CDS | 78992436 | 78993416 | 78992436 | ID=cds.MS.gene30363.t1;Parent=MS.gene30363.t1 |
| chr8.1 | exon | 78991852 | 78991989 | 78991852 | ID=MS.gene30363.t1.exon5;Parent=MS.gene30363.t1 |
| chr8.1 | CDS | 78991852 | 78991989 | 78991852 | ID=cds.MS.gene30363.t1;Parent=MS.gene30363.t1 |
| chr8.1 | exon | 78990817 | 78991113 | 78990817 | ID=MS.gene30363.t1.exon6;Parent=MS.gene30363.t1 |
| chr8.1 | CDS | 78990817 | 78991113 | 78990817 | ID=cds.MS.gene30363.t1;Parent=MS.gene30363.t1 |
| chr8.1 | exon | 78990639 | 78990695 | 78990639 | ID=MS.gene30363.t1.exon7;Parent=MS.gene30363.t1 |
| chr8.1 | CDS | 78990639 | 78990695 | 78990639 | ID=cds.MS.gene30363.t1;Parent=MS.gene30363.t1 |
| chr8.1 | exon | 78989646 | 78989822 | 78989646 | ID=MS.gene30363.t1.exon8;Parent=MS.gene30363.t1 |
| chr8.1 | CDS | 78989646 | 78989822 | 78989646 | ID=cds.MS.gene30363.t1;Parent=MS.gene30363.t1 |
| Gene Sequence |
| Protein sequence |
