Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25156.t1 | XP_013444440.1 | 96.3 | 629 | 18 | 2 | 1 | 629 | 44 | 667 | 0.00E+00 | 1157.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25156.t1 | Q9LL45 | 36.6 | 112 | 53 | 4 | 484 | 590 | 509 | 607 | 5.0e-10 | 67.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25156.t1 | A0A072TY48 | 96.3 | 629 | 18 | 2 | 1 | 629 | 44 | 667 | 0.0e+00 | 1157.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene25156.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene011302 | MS.gene25156 | PPI |
| MS.gene07888 | MS.gene25156 | PPI |
| MS.gene30363 | MS.gene25156 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25156.t1 | MTR_8g020330 | 96.343 | 629 | 18 | 2 | 1 | 629 | 44 | 667 | 0.0 | 1243 |
| MS.gene25156.t1 | MTR_8g020330 | 95.707 | 629 | 18 | 3 | 1 | 629 | 44 | 663 | 0.0 | 1228 |
| MS.gene25156.t1 | MTR_8g020330 | 95.548 | 629 | 18 | 3 | 1 | 629 | 44 | 662 | 0.0 | 1226 |
| MS.gene25156.t1 | MTR_8g020330 | 94.913 | 629 | 18 | 4 | 1 | 629 | 44 | 658 | 0.0 | 1211 |
| MS.gene25156.t1 | MTR_8g020330 | 95.471 | 552 | 15 | 3 | 1 | 552 | 44 | 585 | 0.0 | 1073 |
| MS.gene25156.t1 | MTR_1g063940 | 38.095 | 126 | 75 | 2 | 474 | 597 | 305 | 429 | 8.27e-18 | 87.0 |
| MS.gene25156.t1 | MTR_1g063940 | 37.795 | 127 | 75 | 3 | 474 | 597 | 305 | 430 | 1.92e-17 | 85.9 |
| MS.gene25156.t1 | MTR_1g063940 | 37.795 | 127 | 75 | 3 | 474 | 597 | 313 | 438 | 2.19e-17 | 85.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25156.t1 | AT1G72650 | 38.073 | 633 | 313 | 18 | 1 | 599 | 43 | 630 | 1.45e-108 | 340 |
| MS.gene25156.t1 | AT1G72650 | 38.756 | 627 | 311 | 19 | 1 | 599 | 43 | 624 | 3.16e-108 | 339 |
| MS.gene25156.t1 | AT1G17460 | 36.409 | 607 | 316 | 19 | 1 | 600 | 41 | 584 | 1.90e-84 | 276 |
| MS.gene25156.t1 | AT1G17460 | 36.129 | 620 | 320 | 21 | 1 | 600 | 41 | 604 | 2.29e-82 | 271 |
| MS.gene25156.t1 | AT1G17460 | 35.750 | 607 | 299 | 18 | 1 | 600 | 41 | 563 | 3.46e-81 | 267 |
| MS.gene25156.t1 | AT2G37025 | 50.000 | 94 | 46 | 1 | 505 | 597 | 288 | 381 | 3.21e-20 | 94.0 |
| MS.gene25156.t1 | AT2G37025 | 50.000 | 94 | 46 | 1 | 505 | 597 | 288 | 381 | 3.21e-20 | 94.0 |
| MS.gene25156.t1 | AT2G37025 | 50.000 | 94 | 46 | 1 | 505 | 597 | 288 | 381 | 3.21e-20 | 94.0 |
| MS.gene25156.t1 | AT3G53790 | 33.600 | 125 | 67 | 4 | 474 | 590 | 272 | 388 | 4.68e-11 | 65.5 |
Find 154 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAACTTCATGAACTGTTTA+AGG | 0.149927 | 8.4:-73274010 | MS.gene25156:CDS |
| CCCGAGTAACACAAGGAATT+TGG | 0.234511 | 8.4:+73273437 | None:intergenic |
| TTAGACTCTCTTGGAGGTTC+TGG | 0.260346 | 8.4:-73273463 | MS.gene25156:CDS |
| GAAGCTAAATGCAAAGTTTC+AGG | 0.274137 | 8.4:-73275233 | MS.gene25156:intron |
| GGCACTGCAGAGGCAGATTT+GGG | 0.280785 | 8.4:-73275256 | MS.gene25156:CDS |
| CTAAAATTGGCTCAGGAATC+GGG | 0.284289 | 8.4:+73270559 | None:intergenic |
| TCTCTCACACGTACTAAAAT+TGG | 0.292996 | 8.4:+73270546 | None:intergenic |
| AGGCACTGCAGAGGCAGATT+TGG | 0.303362 | 8.4:-73275257 | MS.gene25156:CDS |
| TGTAACCTCTGCGGAAAATA+TGG | 0.305933 | 8.4:-73273818 | MS.gene25156:CDS |
| TCCAAATTCCTTGTGTTACT+CGG | 0.328725 | 8.4:-73273438 | MS.gene25156:CDS |
| ACTAAAATTGGCTCAGGAAT+CGG | 0.332607 | 8.4:+73270558 | None:intergenic |
| AAGACTGGAAAATCTTAATA+TGG | 0.340239 | 8.4:-73273713 | MS.gene25156:CDS |
| GAACTGTTTAAGGTCACTTT+TGG | 0.340400 | 8.4:-73274000 | MS.gene25156:CDS |
| TTAGGCCTCAATTCCTGCCT+TGG | 0.347102 | 8.4:+73271815 | None:intergenic |
| CCCTCTGTGGCATGACTTGA+GGG | 0.348574 | 8.4:+73271782 | None:intergenic |
| TACCCAGGCGTTTCACAATT+AGG | 0.349710 | 8.4:-73275277 | MS.gene25156:intron |
| ATGCTATAGAATGTGCTTCC+TGG | 0.350653 | 8.4:+73274202 | None:intergenic |
| ATTACTTCATCATCTGTTGC+AGG | 0.361219 | 8.4:+73286200 | None:intergenic |
| TCAATCGAAAGATCATCTTC+TGG | 0.362969 | 8.4:-73275726 | MS.gene25156:CDS |
| AGCTGTTAACTTGCTTGAAC+TGG | 0.373535 | 8.4:+73270488 | None:intergenic |
| GTGGTAAATGTTCTTGTCTC+TGG | 0.379761 | 8.4:+73273490 | None:intergenic |
| TATAGTCTTAGTAATCAATC+TGG | 0.381950 | 8.4:-73274168 | MS.gene25156:CDS |
| ACGGGCGAGGCTGCAAAGTC+AGG | 0.403600 | 8.4:-73272756 | MS.gene25156:CDS |
| TCTGTCTGAAACTCCATTCC+AGG | 0.407475 | 8.4:-73274220 | MS.gene25156:CDS |
| CCTTGTTGAGGTATTGAAAC+TGG | 0.410633 | 8.4:-73271696 | MS.gene25156:CDS |
| ACCTTCACAGGCATTGAACT+TGG | 0.414599 | 8.4:+73272669 | None:intergenic |
| TATCACTCCTCCGGAAGGTC+TGG | 0.414828 | 8.4:+73274128 | None:intergenic |
| AATAAAGTCGTTAGCAATCA+TGG | 0.425285 | 8.4:-73272732 | MS.gene25156:CDS |
| GACAGATGGAGAAATATGTT+TGG | 0.426126 | 8.4:-73274049 | MS.gene25156:CDS |
| TCAGTTGTGCCAATCATTAC+CGG | 0.432862 | 8.4:+73271839 | None:intergenic |
| TTGCTTGAACTGGAATTTGA+AGG | 0.433165 | 8.4:+73270498 | None:intergenic |
| TCAAGCAAGTTAACAGCTAA+TGG | 0.433448 | 8.4:-73270483 | MS.gene25156:CDS |
| ACCACCAGGTTAGACTCTCT+TGG | 0.437848 | 8.4:-73273472 | MS.gene25156:CDS |
| GATCAGTGTTCCAGACCTTC+CGG | 0.438443 | 8.4:-73274138 | MS.gene25156:CDS |
| CATGTTATGCCGGGCCTGCT+AGG | 0.439474 | 8.4:-73273522 | MS.gene25156:CDS |
| GATGCTGCAAAAGGTTAAAC+AGG | 0.440482 | 8.4:-73274343 | MS.gene25156:CDS |
| ATCTTCTGGGAAGCTTCGAT+TGG | 0.453710 | 8.4:-73275712 | MS.gene25156:CDS |
| GGTGTGTCGCGGTGTGGACC+AGG | 0.455670 | 8.4:-73271668 | MS.gene25156:CDS |
| CAATCGAAAGATCATCTTCT+GGG | 0.456715 | 8.4:-73275725 | MS.gene25156:CDS |
| TAAAAGTACGGGACACATAC+AGG | 0.458554 | 8.4:-73273554 | MS.gene25156:CDS |
| CGCGGTGTGGACCAGGGAGG+TGG | 0.459826 | 8.4:-73271661 | MS.gene25156:CDS |
| ACAAACAGTGGTTGAGGAGG+AGG | 0.470154 | 8.4:-73273957 | MS.gene25156:CDS |
| GTCAAGTTCTAATAAAAGTA+CGG | 0.470595 | 8.4:-73273566 | MS.gene25156:CDS |
| GCCCTCTGTGGCATGACTTG+AGG | 0.473621 | 8.4:+73271781 | None:intergenic |
| AAGCAGTATCCGGTAATGAT+TGG | 0.478775 | 8.4:-73271848 | MS.gene25156:CDS |
| CCAAATTCCTTGTGTTACTC+GGG | 0.488276 | 8.4:-73273437 | MS.gene25156:CDS |
| GAGGTATTGAAACTGGTTGA+TGG | 0.490269 | 8.4:-73271689 | MS.gene25156:CDS |
| GAAAGATAAGAAGCAGTATC+CGG | 0.494461 | 8.4:-73271858 | MS.gene25156:CDS |
| AGAAACTTCGCTTGTCATCT+CGG | 0.494772 | 8.4:-73274317 | MS.gene25156:CDS |
| AGTATGCATGGAGACAGAGC+AGG | 0.495168 | 8.4:-73270441 | MS.gene25156:CDS |
| CTCTTCAATATATCGCTTAG+TGG | 0.496612 | 8.4:+73273627 | None:intergenic |
| ACAGCTAATGGTGCAACTAA+TGG | 0.498002 | 8.4:-73270471 | MS.gene25156:CDS |
| AGTTAATATTCCCACTGCTA+AGG | 0.498162 | 8.4:-73271753 | MS.gene25156:CDS |
| ATAGAATGTGCTTCCTGGAA+TGG | 0.499600 | 8.4:+73274207 | None:intergenic |
| GGAAAATATGGCTGTACAAA+GGG | 0.504045 | 8.4:-73273806 | MS.gene25156:CDS |
| AAATTCCATCCGACTGGCAC+GGG | 0.505631 | 8.4:-73272774 | MS.gene25156:CDS |
| GCTTCTCCAACATGTTATGC+CGG | 0.508015 | 8.4:-73273532 | MS.gene25156:CDS |
| TGCACCAACACCTGCTGATG+AGG | 0.508018 | 8.4:-73271425 | MS.gene25156:CDS |
| GTCTTGTTTCAGAAGCAACT+TGG | 0.508839 | 8.4:+73273731 | None:intergenic |
| ACCGTCTGATGAACCTTCAC+AGG | 0.512080 | 8.4:+73272657 | None:intergenic |
| ATTTGTACATGAGAATGAAC+AGG | 0.513633 | 8.4:+73274291 | None:intergenic |
| GTTAATATTCCCACTGCTAA+GGG | 0.514901 | 8.4:-73271752 | MS.gene25156:CDS |
| TGATATGATGTTCAGGTTGA+AGG | 0.515704 | 8.4:-73286239 | None:intergenic |
| CCTCGCCCGTGCCAGTCGGA+TGG | 0.517627 | 8.4:+73272769 | None:intergenic |
| TCTGGATAAGCATTCCTAGC+AGG | 0.519734 | 8.4:+73273508 | None:intergenic |
| CTGATCCAAGGCAGGAATTG+AGG | 0.519818 | 8.4:-73271820 | MS.gene25156:CDS |
| TATTGAACAGATGCTGCAAA+AGG | 0.522438 | 8.4:-73274352 | MS.gene25156:CDS |
| GCAGCCTCGCCCGTGCCAGT+CGG | 0.525473 | 8.4:+73272765 | None:intergenic |
| ACGATGTGAGTACGAAGAAA+AGG | 0.527449 | 8.4:+73271619 | None:intergenic |
| AATCTAGAGAGCAAATTCCT+AGG | 0.527590 | 8.4:-73273591 | MS.gene25156:CDS |
| TCAAGTTCTAATAAAAGTAC+GGG | 0.529173 | 8.4:-73273565 | MS.gene25156:CDS |
| TTTCAGAAATTCCATCCGAC+TGG | 0.533663 | 8.4:-73272780 | MS.gene25156:intron |
| GGAGGTGGTCTGAGATCAAA+CGG | 0.534301 | 8.4:-73271646 | MS.gene25156:CDS |
| GATGTTCAGGTTGAAGGTGA+TGG | 0.534856 | 8.4:-73286233 | None:intergenic |
| AGAACCTTCTCATTTCTGAC+AGG | 0.535005 | 8.4:+73274240 | None:intergenic |
| ATCAACTTCGCAACCACCCA+CGG | 0.535596 | 8.4:+73273759 | None:intergenic |
| ACATATTTCTCCATCTGTCA+TGG | 0.536255 | 8.4:+73274053 | None:intergenic |
| CCATCCGACTGGCACGGGCG+AGG | 0.536934 | 8.4:-73272769 | MS.gene25156:CDS |
| AGTTGCTTCTGAAACAAGAC+TGG | 0.537136 | 8.4:-73273728 | MS.gene25156:CDS |
| CTTCGATTGGAGTGCTCGGA+AGG | 0.537545 | 8.4:-73275699 | MS.gene25156:intron |
| CTTCTCCAACATGTTATGCC+GGG | 0.538783 | 8.4:-73273531 | MS.gene25156:CDS |
| CGGAAAATATGGCTGTACAA+AGG | 0.539341 | 8.4:-73273807 | MS.gene25156:CDS |
| TTGATCTCAGACCACCTCCC+TGG | 0.544021 | 8.4:+73271650 | None:intergenic |
| TCTTCAATATATCGCTTAGT+GGG | 0.545730 | 8.4:+73273628 | None:intergenic |
| TGATGAAGTAATGGAGGTCG+AGG | 0.548266 | 8.4:-73286189 | MS.gene25156:CDS |
| CAGATGAATTCGCGGAAGCA+TGG | 0.549879 | 8.4:-73270588 | MS.gene25156:CDS |
| ACCAGGTTAGACTCTCTTGG+AGG | 0.551035 | 8.4:-73273469 | MS.gene25156:CDS |
| ACCACTTTCTATCACTCCTC+CGG | 0.551691 | 8.4:+73274119 | None:intergenic |
| ACACGTACTAAAATTGGCTC+AGG | 0.556714 | 8.4:+73270552 | None:intergenic |
| ATGCGTGTTGTTGCAGACAC+TGG | 0.557981 | 8.4:-73286140 | MS.gene25156:CDS |
| GTGTATGACAGATGAATTCG+CGG | 0.560439 | 8.4:-73270596 | MS.gene25156:intron |
| CCCTCAAGTCATGCCACAGA+GGG | 0.560986 | 8.4:-73271782 | MS.gene25156:CDS |
| GCACCAACACCTGCTGATGA+GGG | 0.561140 | 8.4:-73271424 | MS.gene25156:CDS |
| CTCATTCCACCCTTAGCAGT+GGG | 0.563593 | 8.4:+73271743 | None:intergenic |
| TTATTAGAACTTGACGACCT+AGG | 0.567947 | 8.4:+73273574 | None:intergenic |
| ATAGTCTTAGTAATCAATCT+GGG | 0.568164 | 8.4:-73274167 | MS.gene25156:CDS |
| ATTTCCTGTCAGAAATGAGA+AGG | 0.570033 | 8.4:-73274244 | MS.gene25156:CDS |
| GCCAAGTTCAATGCCTGTGA+AGG | 0.575095 | 8.4:-73272670 | MS.gene25156:CDS |
| GTATAATGATTCAAAAGCCG+TGG | 0.575963 | 8.4:-73273776 | MS.gene25156:CDS |
| TTGCTTTGCAGGACAAATGG+AGG | 0.577697 | 8.4:-73271468 | MS.gene25156:intron |
| ATGTTCAGGTTGAAGGTGAT+GGG | 0.579628 | 8.4:-73286232 | None:intergenic |
| GAAATTCCATCCGACTGGCA+CGG | 0.581013 | 8.4:-73272775 | MS.gene25156:CDS |
| GGAACATGAATTAGAAGATG+AGG | 0.581860 | 8.4:-73273692 | MS.gene25156:CDS |
| TGATGCTGATAGTGAAATTG+AGG | 0.581949 | 8.4:-73272706 | MS.gene25156:CDS |
| GCCTGTGAAGGTTCATCAGA+CGG | 0.582544 | 8.4:-73272658 | MS.gene25156:intron |
| GAAATTTATCAGCAGAACAC+TGG | 0.582582 | 8.4:+73274262 | None:intergenic |
| GTGTGTCGCGGTGTGGACCA+GGG | 0.582938 | 8.4:-73271667 | MS.gene25156:CDS |
| TGGCACAACTGATCCAAGGC+AGG | 0.586281 | 8.4:-73271828 | MS.gene25156:CDS |
| TGCAACAGATGATGAAGTAA+TGG | 0.588284 | 8.4:-73286198 | MS.gene25156:CDS |
| ATAAGCATTCCTAGCAGGCC+CGG | 0.588525 | 8.4:+73273513 | None:intergenic |
| GGAGGAAGCATCATCGAGCA+TGG | 0.588802 | 8.4:-73271721 | MS.gene25156:CDS |
| TCGTACCTCTGTTGATCTCA+AGG | 0.591435 | 8.4:-73271600 | MS.gene25156:intron |
| TGAAAGACAAACAGTGGTTG+AGG | 0.593919 | 8.4:-73273963 | MS.gene25156:CDS |
| TCCGGAGGAGTGATAGAAAG+TGG | 0.595035 | 8.4:-73274120 | MS.gene25156:CDS |
| AATGGTGCAAGGAGTATGCA+TGG | 0.595350 | 8.4:-73270453 | MS.gene25156:CDS |
| GAAGCTTCGATTGGAGTGCT+CGG | 0.603127 | 8.4:-73275703 | MS.gene25156:CDS |
| ACCAACACCTGCTGATGAGG+GGG | 0.616120 | 8.4:-73271422 | MS.gene25156:intron |
| GTTGATGGTGTGTCGCGGTG+TGG | 0.617079 | 8.4:-73271674 | MS.gene25156:CDS |
| CCTCATTCCACCCTTAGCAG+TGG | 0.618351 | 8.4:+73271742 | None:intergenic |
| GCAGGCCCGGCATAACATGT+TGG | 0.619397 | 8.4:+73273526 | None:intergenic |
| TCGAGCATGGACCCTTGTTG+AGG | 0.624113 | 8.4:-73271708 | MS.gene25156:CDS |
| TTCACAATTAGGCACTGCAG+AGG | 0.626200 | 8.4:-73275266 | MS.gene25156:CDS |
| CTTTCTATCACTCCTCCGGA+AGG | 0.629182 | 8.4:+73274123 | None:intergenic |
| TTCAGGTTGAAGGTGATGGG+AGG | 0.629250 | 8.4:-73286229 | None:intergenic |
| CCAGTTTCAATACCTCAACA+AGG | 0.630743 | 8.4:+73271696 | None:intergenic |
| AGACAAGAACATTTACCACC+AGG | 0.632627 | 8.4:-73273486 | MS.gene25156:CDS |
| CACCAACACCTGCTGATGAG+GGG | 0.632966 | 8.4:-73271423 | MS.gene25156:CDS |
| GTATGCATGGAGACAGAGCA+GGG | 0.633101 | 8.4:-73270440 | MS.gene25156:CDS |
| CTGCTAAGGGTGGAATGAGG+AGG | 0.634715 | 8.4:-73271739 | MS.gene25156:CDS |
| AATATTCCCACTGCTAAGGG+TGG | 0.635127 | 8.4:-73271749 | MS.gene25156:CDS |
| TAAAATTGGCTCAGGAATCG+GGG | 0.636315 | 8.4:+73270560 | None:intergenic |
| TGATTGGCACAACTGATCCA+AGG | 0.638247 | 8.4:-73271832 | MS.gene25156:CDS |
| CTTCGCACCCGAGTAACACA+AGG | 0.639559 | 8.4:+73273430 | None:intergenic |
| ACCTCCAAGAGAGTCTAACC+TGG | 0.641656 | 8.4:+73273468 | None:intergenic |
| ATTAACTATATTGCCCTCTG+TGG | 0.645795 | 8.4:+73271769 | None:intergenic |
| ATGGTGCAACTAATGGTGCA+AGG | 0.647506 | 8.4:-73270464 | MS.gene25156:CDS |
| GCACTGCAGAGGCAGATTTG+GGG | 0.651789 | 8.4:-73275255 | MS.gene25156:CDS |
| CCACTGCTAAGGGTGGAATG+AGG | 0.651906 | 8.4:-73271742 | MS.gene25156:CDS |
| TATAATGATTCAAAAGCCGT+GGG | 0.654536 | 8.4:-73273775 | MS.gene25156:CDS |
| AAGACAAACAGTGGTTGAGG+AGG | 0.656203 | 8.4:-73273960 | MS.gene25156:CDS |
| GGGTGCGAAGAAGTCGTCCA+CGG | 0.656929 | 8.4:-73273417 | MS.gene25156:CDS |
| AACTGGTTGATGGTGTGTCG+CGG | 0.661368 | 8.4:-73271679 | MS.gene25156:CDS |
| AACAGATGATGAAGTAATGG+AGG | 0.663256 | 8.4:-73286195 | MS.gene25156:CDS |
| CAAAGTGGAATTGACAGCAG+AGG | 0.663540 | 8.4:+73274089 | None:intergenic |
| AATGATTCAAAAGCCGTGGG+TGG | 0.666719 | 8.4:-73273772 | MS.gene25156:CDS |
| CTACTGTGAAAGACAAACAG+TGG | 0.669591 | 8.4:-73273969 | MS.gene25156:CDS |
| TCCCTCAAGTCATGCCACAG+AGG | 0.700875 | 8.4:-73271783 | MS.gene25156:CDS |
| TCCAAGAGAGTCTAACCTGG+TGG | 0.701922 | 8.4:+73273471 | None:intergenic |
| TGCTGCAGCTGTAACCTCTG+CGG | 0.706466 | 8.4:-73273827 | MS.gene25156:CDS |
| CAGTGTTCCAGACCTTCCGG+AGG | 0.711228 | 8.4:-73274135 | MS.gene25156:CDS |
| TGTCGCGGTGTGGACCAGGG+AGG | 0.718246 | 8.4:-73271664 | MS.gene25156:CDS |
| GAGTACCTTGAGATCAACAG+AGG | 0.719395 | 8.4:+73271595 | None:intergenic |
| CAGTTTCAATACCTCAACAA+GGG | 0.719688 | 8.4:+73271697 | None:intergenic |
| AATTGGCTCAGGAATCGGGG+CGG | 0.733377 | 8.4:+73270563 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 73270431 | 73286246 | 73270431 | ID=MS.gene25156 |
| chr8.4 | mRNA | 73270431 | 73286246 | 73270431 | ID=MS.gene25156.t1;Parent=MS.gene25156 |
| chr8.4 | exon | 73286128 | 73286246 | 73286128 | ID=MS.gene25156.t1.exon1;Parent=MS.gene25156.t1 |
| chr8.4 | CDS | 73286128 | 73286246 | 73286128 | ID=cds.MS.gene25156.t1;Parent=MS.gene25156.t1 |
| chr8.4 | exon | 73275700 | 73275761 | 73275700 | ID=MS.gene25156.t1.exon2;Parent=MS.gene25156.t1 |
| chr8.4 | CDS | 73275700 | 73275761 | 73275700 | ID=cds.MS.gene25156.t1;Parent=MS.gene25156.t1 |
| chr8.4 | exon | 73275234 | 73275292 | 73275234 | ID=MS.gene25156.t1.exon3;Parent=MS.gene25156.t1 |
| chr8.4 | CDS | 73275234 | 73275292 | 73275234 | ID=cds.MS.gene25156.t1;Parent=MS.gene25156.t1 |
| chr8.4 | exon | 73273396 | 73274376 | 73273396 | ID=MS.gene25156.t1.exon4;Parent=MS.gene25156.t1 |
| chr8.4 | CDS | 73273396 | 73274376 | 73273396 | ID=cds.MS.gene25156.t1;Parent=MS.gene25156.t1 |
| chr8.4 | exon | 73272659 | 73272796 | 73272659 | ID=MS.gene25156.t1.exon5;Parent=MS.gene25156.t1 |
| chr8.4 | CDS | 73272659 | 73272796 | 73272659 | ID=cds.MS.gene25156.t1;Parent=MS.gene25156.t1 |
| chr8.4 | exon | 73271601 | 73271897 | 73271601 | ID=MS.gene25156.t1.exon6;Parent=MS.gene25156.t1 |
| chr8.4 | CDS | 73271601 | 73271897 | 73271601 | ID=cds.MS.gene25156.t1;Parent=MS.gene25156.t1 |
| chr8.4 | exon | 73271423 | 73271479 | 73271423 | ID=MS.gene25156.t1.exon7;Parent=MS.gene25156.t1 |
| chr8.4 | CDS | 73271423 | 73271479 | 73271423 | ID=cds.MS.gene25156.t1;Parent=MS.gene25156.t1 |
| chr8.4 | exon | 73270431 | 73270607 | 73270431 | ID=MS.gene25156.t1.exon8;Parent=MS.gene25156.t1 |
| chr8.4 | CDS | 73270431 | 73270607 | 73270431 | ID=cds.MS.gene25156.t1;Parent=MS.gene25156.t1 |
| Gene Sequence |
| Protein sequence |
