AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene011447


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene011447.t1 MTR_4g102520 97.785 587 9 2 1 583 1 587 0.0 1197
MS.gene011447.t1 MTR_1g072740 96.442 534 16 2 1 531 1 534 0.0 1072
MS.gene011447.t1 MTR_8g467040 33.226 310 193 4 278 577 107 412 1.66e-51 183
MS.gene011447.t1 MTR_4g119620 27.660 329 211 10 266 580 6 321 7.13e-33 129
MS.gene011447.t1 MTR_1g072140 25.243 309 218 8 277 581 14 313 7.31e-30 120
MS.gene011447.t1 MTR_7g086360 26.730 318 220 9 264 577 32 340 3.12e-26 110
MS.gene011447.t1 MTR_8g092620 27.687 307 203 10 278 580 6 297 8.13e-25 105
MS.gene011447.t1 MTR_8g092620 25.000 260 142 9 279 492 47 299 1.29e-12 69.3
MS.gene011447.t1 MTR_4g104380 25.962 312 206 8 278 580 218 513 1.31e-24 108
MS.gene011447.t1 MTR_3g075400 26.471 306 214 8 277 580 212 508 1.04e-23 105
MS.gene011447.t1 MTR_8g092620 27.541 305 202 10 278 578 13 302 2.64e-23 101
MS.gene011447.t1 MTR_2g436510 26.299 308 195 12 287 580 167 456 3.17e-19 91.3
MS.gene011447.t1 MTR_7g076230 26.132 287 188 9 288 556 367 647 4.44e-19 92.0
MS.gene011447.t1 MTR_8g092620 28.774 212 140 7 278 487 6 208 1.24e-16 79.7
MS.gene011447.t1 MTR_6g004040 29.825 171 111 6 281 449 92 255 1.42e-16 84.0
MS.gene011447.t1 MTR_6g004040 23.427 286 195 10 288 561 14 287 1.07e-14 77.8
MS.gene011447.t1 MTR_6g004040 24.868 189 135 4 392 580 31 212 3.85e-13 73.2
MS.gene011447.t1 MTR_6g004040 31.538 130 80 4 280 406 133 256 2.18e-11 67.4
MS.gene011447.t1 MTR_1g069345 25.000 320 223 11 267 580 195 503 3.05e-16 82.4
MS.gene011447.t1 MTR_2g012630 29.545 176 114 7 281 454 91 258 1.59e-15 80.9
MS.gene011447.t1 MTR_2g012630 23.737 198 144 4 383 580 21 211 6.04e-13 72.4
MS.gene011447.t1 MTR_2g012630 22.867 293 198 10 283 561 8 286 1.45e-12 71.2
MS.gene011447.t1 MTR_2g012630 29.545 176 114 7 281 454 91 258 1.89e-15 80.5
MS.gene011447.t1 MTR_2g012630 23.737 198 144 4 383 580 21 211 7.18e-13 72.4
MS.gene011447.t1 MTR_2g012630 22.867 293 198 10 283 561 8 286 1.64e-12 71.2
MS.gene011447.t1 MTR_1g054300 23.037 382 204 10 281 581 110 482 1.94e-15 79.7
MS.gene011447.t1 MTR_1g097140 25.329 304 204 14 283 580 73 359 2.43e-15 79.0
MS.gene011447.t1 MTR_5g090420 21.338 314 234 8 272 580 243 548 8.65e-15 77.8
MS.gene011447.t1 MTR_3g052220 23.824 319 217 11 279 580 202 511 1.50e-14 77.0
MS.gene011447.t1 MTR_3g116500 23.975 317 217 10 285 582 60 371 1.38e-13 73.2
MS.gene011447.t1 MTR_3g116500 25.991 227 152 7 369 582 38 261 6.46e-13 69.7
MS.gene011447.t1 MTR_8g106790 23.022 278 183 12 278 535 54 320 1.01e-12 70.1
MS.gene011447.t1 MTR_4g123597 23.125 320 211 14 281 580 347 651 2.54e-12 70.5
MS.gene011447.t1 MTR_4g105700 21.656 314 218 12 288 582 309 613 7.28e-12 68.9
MS.gene011447.t1 MTR_2g060520 21.429 322 228 8 279 580 115 431 8.23e-12 68.2
MS.gene011447.t1 MTR_1g034785 24.339 189 117 5 281 447 109 293 7.36e-11 65.1
MS.gene011447.t1 MTR_8g104010 23.256 301 189 10 281 580 944 1203 9.06e-11 65.5
MS.gene011447.t1 MTR_8g104010 22.333 300 193 8 281 580 581 840 9.52e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene011447.t1 AT1G10580 77.797 581 119 4 1 580 1 572 0.0 937
MS.gene011447.t1 AT5G54520 32.915 319 204 3 270 580 140 456 1.19e-54 192
MS.gene011447.t1 AT3G49660 25.641 312 214 9 277 580 11 312 5.01e-30 120
MS.gene011447.t1 AT3G49660 28.767 219 145 6 282 495 105 317 1.49e-25 108
MS.gene011447.t1 AT5G64730 27.508 309 201 11 278 580 6 297 6.43e-27 111
MS.gene011447.t1 AT4G15900 29.967 307 183 12 288 580 174 462 3.94e-26 112
MS.gene011447.t1 AT2G43770 26.460 291 206 7 287 574 50 335 8.02e-26 109
MS.gene011447.t1 AT4G02730 24.595 309 215 10 279 580 32 329 4.24e-24 103
MS.gene011447.t1 AT3G16650 28.990 307 185 13 288 580 168 455 5.07e-22 100
MS.gene011447.t1 AT5G50230 24.658 292 196 7 278 560 213 489 4.01e-20 94.4
MS.gene011447.t1 AT5G23430 23.226 310 206 13 283 582 9 296 4.75e-18 89.0
MS.gene011447.t1 AT5G23430 30.000 150 97 5 281 428 92 235 1.65e-14 77.4
MS.gene011447.t1 AT5G23430 29.921 127 86 3 280 406 133 256 3.50e-11 67.0
MS.gene011447.t1 AT5G23430 23.226 310 206 13 283 582 9 296 4.75e-18 89.0
MS.gene011447.t1 AT5G23430 30.000 150 97 5 281 428 92 235 1.65e-14 77.4
MS.gene011447.t1 AT5G23430 29.921 127 86 3 280 406 133 256 3.50e-11 67.0
MS.gene011447.t1 AT5G23430 23.226 310 206 13 283 582 9 296 4.80e-18 89.0
MS.gene011447.t1 AT5G23430 30.000 150 97 5 281 428 92 235 1.59e-14 77.4
MS.gene011447.t1 AT5G23430 29.921 127 86 3 280 406 133 256 3.56e-11 66.6
MS.gene011447.t1 AT5G08390 23.453 307 209 12 283 582 9 296 8.69e-18 87.8
MS.gene011447.t1 AT5G08390 32.000 150 94 5 281 428 92 235 2.01e-15 80.5
MS.gene011447.t1 AT5G08390 32.283 127 83 3 280 406 133 256 1.85e-12 70.9
MS.gene011447.t1 AT5G08560 23.453 307 222 8 278 580 262 559 1.01e-17 87.4
MS.gene011447.t1 AT5G08560 23.453 307 222 8 278 580 262 559 1.01e-17 87.4
MS.gene011447.t1 AT5G08560 23.453 307 222 8 278 580 262 559 1.01e-17 87.4
MS.gene011447.t1 AT1G61210 31.429 175 112 6 281 454 91 258 6.93e-17 85.1
MS.gene011447.t1 AT1G61210 25.000 304 196 12 288 581 13 294 5.68e-16 82.4
MS.gene011447.t1 AT1G61210 31.008 129 82 5 280 406 132 255 1.43e-11 68.2
MS.gene011447.t1 AT1G15440 26.457 223 156 5 288 506 347 565 9.15e-17 84.7
MS.gene011447.t1 AT1G61210 31.429 175 112 6 281 454 91 258 9.75e-17 84.7
MS.gene011447.t1 AT1G61210 25.000 304 196 12 288 581 13 294 9.72e-16 81.6
MS.gene011447.t1 AT1G61210 31.008 129 82 5 280 406 132 255 1.80e-11 67.8
MS.gene011447.t1 AT1G61210 31.429 175 112 6 281 454 91 258 1.03e-16 84.7
MS.gene011447.t1 AT1G61210 25.000 304 196 12 288 581 13 294 9.98e-16 81.6
MS.gene011447.t1 AT1G61210 31.008 129 82 5 280 406 132 255 1.80e-11 67.8
MS.gene011447.t1 AT1G15440 26.457 223 156 5 288 506 387 605 1.08e-16 84.7
MS.gene011447.t1 AT5G43920 24.688 320 218 12 274 580 204 513 1.49e-16 83.2
MS.gene011447.t1 AT1G11160 24.742 291 195 9 283 561 8 286 4.35e-16 82.8
MS.gene011447.t1 AT1G11160 27.684 177 120 6 281 456 91 260 5.87e-15 79.0
MS.gene011447.t1 AT1G11160 25.397 189 134 4 392 580 30 211 1.68e-14 77.8
MS.gene011447.t1 AT1G11160 30.534 131 80 6 280 406 132 255 5.93e-11 66.2
MS.gene011447.t1 AT1G11160 24.742 291 195 9 283 561 8 286 4.38e-16 82.8
MS.gene011447.t1 AT1G11160 27.684 177 120 6 281 456 91 260 5.82e-15 79.0
MS.gene011447.t1 AT1G11160 25.397 189 134 4 392 580 30 211 1.73e-14 77.4
MS.gene011447.t1 AT1G11160 30.534 131 80 6 280 406 132 255 5.97e-11 66.2
MS.gene011447.t1 AT1G11160 24.742 291 195 9 283 561 8 286 4.50e-16 82.8
MS.gene011447.t1 AT1G11160 27.684 177 120 6 281 456 91 260 6.24e-15 79.0
MS.gene011447.t1 AT1G11160 25.397 189 134 4 392 580 30 211 1.66e-14 77.8
MS.gene011447.t1 AT1G11160 30.534 131 80 6 280 406 132 255 6.02e-11 66.2
MS.gene011447.t1 AT1G11160 27.684 177 120 6 281 456 49 218 4.60e-15 79.3
MS.gene011447.t1 AT1G11160 25.749 167 117 4 414 580 10 169 1.83e-12 70.9
MS.gene011447.t1 AT1G11160 25.000 248 163 8 326 561 8 244 9.02e-12 68.9
MS.gene011447.t1 AT1G11160 30.534 131 80 6 280 406 90 213 4.91e-11 66.6
MS.gene011447.t1 AT3G18130 24.907 269 175 11 287 535 60 321 4.61e-14 73.9
MS.gene011447.t1 AT3G18130 25.279 269 183 9 289 549 14 272 9.91e-12 67.0
MS.gene011447.t1 AT5G52820 24.497 298 204 10 287 580 191 471 2.91e-13 72.8
MS.gene011447.t1 AT2G33340 25.591 254 173 9 281 528 255 498 3.75e-13 72.8
MS.gene011447.t1 AT2G33340 25.591 254 173 9 281 528 255 498 3.75e-13 72.8
MS.gene011447.t1 AT1G48630 24.907 269 177 11 287 537 60 321 4.61e-13 71.2
MS.gene011447.t1 AT1G48630 24.542 273 188 9 285 549 10 272 5.85e-12 67.8
MS.gene011447.t1 AT5G16750 25.444 169 118 5 285 448 55 220 6.43e-13 72.4
MS.gene011447.t1 AT2G41500 23.228 254 179 7 331 580 252 493 1.02e-12 71.2
MS.gene011447.t1 AT2G41500 25.472 212 152 6 282 492 331 537 4.39e-12 69.3
MS.gene011447.t1 AT2G41500 23.228 254 179 7 331 580 252 493 1.02e-12 71.2
MS.gene011447.t1 AT2G41500 25.472 212 152 6 282 492 331 537 4.39e-12 69.3
MS.gene011447.t1 AT1G73720 24.451 319 214 12 279 580 201 509 1.97e-12 70.5
MS.gene011447.t1 AT3G21540 23.864 264 174 12 330 580 402 651 6.84e-12 69.3
MS.gene011447.t1 AT3G21540 27.094 203 134 8 299 494 26 221 4.62e-11 66.6
MS.gene011447.t1 AT2G33340 27.168 173 116 6 281 448 255 422 1.03e-11 67.8
MS.gene011447.t1 AT1G79990 22.460 187 141 3 306 490 72 256 1.17e-11 68.6
MS.gene011447.t1 AT1G18080 23.420 269 182 9 287 537 60 322 1.23e-11 66.6
MS.gene011447.t1 AT1G18080 22.695 282 161 7 285 558 10 242 1.85e-11 66.2
MS.gene011447.t1 AT1G79990 22.460 187 141 3 306 490 72 256 1.25e-11 68.2
MS.gene011447.t1 AT5G67320 23.529 357 201 14 278 571 253 600 6.60e-11 65.9
MS.gene011447.t1 AT5G60940 22.812 320 225 9 278 580 111 425 6.86e-11 65.1
MS.gene011447.t1 AT5G60940 22.812 320 225 9 278 580 19 333 7.93e-11 64.3

Find 167 sgRNAs with CRISPR-Local

Find 221 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATAGTCATCATTAGTTTAT+TGG 0.189877 8.2:+21171421 MS.gene011447:CDS
CATTCTCTTCTTTCTTCTTA+AGG 0.216922 8.2:-21169941 None:intergenic
GTGAGGGTAAGTGTTGGTTC+TGG 0.241552 8.2:+21171041 MS.gene011447:CDS
AGCATGGTGTCGTCGACTTT+GGG 0.258974 8.2:-21169561 None:intergenic
ACCCTACCTATGACCAACTA+TGG 0.277536 8.2:+21169655 MS.gene011447:CDS
ATTCTCTTCTTTCTTCTTAA+GGG 0.283276 8.2:-21169940 None:intergenic
GGTGAGACGGGCCTTGGATG+GGG 0.301397 8.2:-21169680 None:intergenic
CGCTTCACCCCAACGCGAAT+TGG 0.301825 8.2:+21170861 MS.gene011447:CDS
CAAGAGTATGATCAGCATTT+GGG 0.309524 8.2:+21170692 MS.gene011447:CDS
TGGATACTAAGGTTAAGATT+TGG 0.323671 8.2:+21170384 MS.gene011447:CDS
GGATACTAAGGTTAAGATTT+GGG 0.331103 8.2:+21170385 MS.gene011447:CDS
TGATAAGAATATTAAGTATT+GGG 0.340716 8.2:+21170514 MS.gene011447:CDS
GCGGCGAGCCAATTCGCGTT+GGG 0.343990 8.2:-21170869 None:intergenic
CGATATAACCTGCCCTGTTT+CGG 0.352782 8.2:-21170540 None:intergenic
TGAGGGTAAGTGTTGGTTCT+GGG 0.355149 8.2:+21171042 MS.gene011447:CDS
TGGGTCATTCCAAAGCTGTT+AGG 0.358107 8.2:+21170444 MS.gene011447:CDS
TCAAGAGTATGATCAGCATT+TGG 0.358810 8.2:+21170691 MS.gene011447:CDS
TAGCATGGTGTCGTCGACTT+TGG 0.362731 8.2:-21169562 None:intergenic
TCCCTCAGGGTATGGGAGTA+TGG 0.364907 8.2:+21170779 MS.gene011447:CDS
CAAAGAGATTGGTGCATACT+TGG 0.367144 8.2:+21170288 MS.gene011447:CDS
ACATTCTGTTTATCCTCATC+CGG 0.374087 8.2:-21170605 None:intergenic
GATGGGTTTAGAGAGGGTTT+TGG 0.379523 8.2:-21169604 None:intergenic
AAGTATTGGGATACCGAAAC+AGG 0.381659 8.2:+21170527 MS.gene011447:CDS
CAAAAGGGGTTTCTGCGATT+AGG 0.383880 8.2:+21170321 MS.gene011447:CDS
CAAGTATGCACCAATCTCTT+TGG 0.386596 8.2:-21170287 None:intergenic
TTTGCTGGACACATTGTTGC+TGG 0.388967 8.2:+21170962 MS.gene011447:CDS
ACAAATATCCCTAACAGCTT+TGG 0.389574 8.2:-21170453 None:intergenic
GGGTTAAGCTTCACAACATA+AGG 0.392453 8.2:-21170584 None:intergenic
GTGAGACGGGCCTTGGATGG+GGG 0.393229 8.2:-21169679 None:intergenic
GGGTGAGACGGGCCTTGGAT+GGG 0.394403 8.2:-21169681 None:intergenic
AGAATCAAATGACCCGAATT+CGG 0.398493 8.2:-21170350 None:intergenic
CGTAAGGGTGAGACGGGCCT+TGG 0.399519 8.2:-21169686 None:intergenic
TTACTCGCCTTAGCATCTTT+CGG 0.401503 8.2:-21170248 None:intergenic
GTAAGTGTTGGTTCTGGGAT+TGG 0.407813 8.2:+21171047 MS.gene011447:CDS
CGCGTTGGGGTGAAGCGAAA+TGG 0.409944 8.2:-21170855 None:intergenic
GCAAAGTAGCGACGTGTGGC+TGG 0.411956 8.2:+21171149 MS.gene011447:CDS
ATGATAAGAATATTAAGTAT+TGG 0.420715 8.2:+21170513 MS.gene011447:CDS
TTGTGCTATAAATAAGAATC+TGG 0.429963 8.2:-21170907 None:intergenic
TCTTCTTCTGTTCGCGGTGT+GGG 0.431476 8.2:-21169905 None:intergenic
GGGATTATCAAGGTAGGTCT+TGG 0.431742 8.2:+21170216 MS.gene011447:CDS
CGCGGCGAGCCAATTCGCGT+TGG 0.432970 8.2:-21170870 None:intergenic
ATGACAAGTCCCTCAGGGTA+TGG 0.434880 8.2:+21170771 MS.gene011447:CDS
GAGTCCTTGGGCTGGGAAGA+AGG 0.437077 8.2:+21170049 MS.gene011447:CDS
AATAACCACGCCTCAGAAGC+TGG 0.437350 8.2:-21170014 None:intergenic
TTGGCTCGCCGCGCAGAGCT+TGG 0.439153 8.2:+21170880 MS.gene011447:CDS
CGGTTGCCAGTGGCATCCTC+TGG 0.441347 8.2:+21171120 MS.gene011447:CDS
AGGGTGAGACGGGCCTTGGA+TGG 0.442397 8.2:-21169682 None:intergenic
TGAAGAATAAGAAGAGTCCT+TGG 0.443248 8.2:+21170036 MS.gene011447:CDS
CTCTTCTTCTGTTCGCGGTG+TGG 0.444110 8.2:-21169906 None:intergenic
GGGCGGCAGAACGGGATGGG+AGG 0.448266 8.2:-21169539 None:intergenic
CTGGATCGTTGTCGGAGTAT+TGG 0.449647 8.2:-21169467 None:intergenic
AGAACGGGATGGGAGGAGAC+GGG 0.450151 8.2:-21169532 None:intergenic
CAATACTCCGACAACGATCC+AGG 0.450178 8.2:+21169468 MS.gene011447:CDS
GTTCAGTGGGATATGAATAC+AGG 0.451594 8.2:+21170659 MS.gene011447:CDS
GGGTCATTCCAAAGCTGTTA+GGG 0.454301 8.2:+21170445 MS.gene011447:CDS
GAACGGGATGGGAGGAGACG+GGG 0.455804 8.2:-21169531 None:intergenic
AGGTTTACAAGGAGAGTTAA+CGG 0.457451 8.2:+21170073 MS.gene011447:CDS
TTTGGGGTCGGCTACAGTTA+GGG 0.461852 8.2:-21169586 None:intergenic
GTTATATCGACGTTCTCCAC+TGG 0.463024 8.2:+21170554 MS.gene011447:CDS
TTCGGGTCATTTGATTCTCT+CGG 0.463515 8.2:+21170355 MS.gene011447:CDS
CGGGATGGGAGGAGACGGGG+TGG 0.467337 8.2:-21169528 None:intergenic
GTTTGTGGTTACGCATACCT+TGG 0.469238 8.2:-21169725 None:intergenic
TAGCGACGTGTGGCTGGGAC+GGG 0.469608 8.2:+21171155 MS.gene011447:CDS
GAGGAGCACGCCAAGAAGAA+AGG 0.472310 8.2:+21170116 MS.gene011447:CDS
CTAGTGATGACAAGTCCCTC+AGG 0.475381 8.2:+21170765 MS.gene011447:CDS
TCAACACTGGTAAATGTATG+AGG 0.476160 8.2:+21170414 MS.gene011447:CDS
GCCCATAGTTGGTCATAGGT+AGG 0.476846 8.2:-21169657 None:intergenic
ACTTGGAGCGGACATACAAA+AGG 0.478707 8.2:+21170305 MS.gene011447:CDS
TATTGGTCCAACAGTCTAGC+AGG 0.485881 8.2:+21171438 MS.gene011447:CDS
CAGAACGGGATGGGAGGAGA+CGG 0.487345 8.2:-21169533 None:intergenic
AGGCGACAAGGTGTTGAGTT+GGG 0.487361 8.2:-21169629 None:intergenic
AACTCAAAACCCTGATTCAC+CGG 0.489991 8.2:+21169497 MS.gene011447:CDS
CTTCGACGAAACCAAGTTTG+TGG 0.490052 8.2:-21169740 None:intergenic
CTCGGCTGGTATGGATACTA+AGG 0.491505 8.2:+21170373 MS.gene011447:CDS
TTGGGTCGATGGGTTTAGAG+AGG 0.491971 8.2:-21169611 None:intergenic
TTTGATTCTCTCGGCTGGTA+TGG 0.492749 8.2:+21170364 MS.gene011447:CDS
CATGTCTCCTGCTAGACTGT+TGG 0.495982 8.2:-21171445 None:intergenic
GGTCATTTGATTCTCTCGGC+TGG 0.501830 8.2:+21170359 MS.gene011447:CDS
TTTGTGGTTACGCATACCTT+GGG 0.502829 8.2:-21169724 None:intergenic
TGTTGCTGGATATGCTTGTC+AGG 0.503005 8.2:+21170976 MS.gene011447:CDS
AGGTGTTGAGTTGGGTCGAT+GGG 0.504885 8.2:-21169621 None:intergenic
GCTAAACCGTCTTTAGCGTA+AGG 0.515618 8.2:-21169702 None:intergenic
TGGTGAACCTGGATCGTTGT+CGG 0.515766 8.2:-21169475 None:intergenic
CAAAGTAGCGACGTGTGGCT+GGG 0.520964 8.2:+21171150 MS.gene011447:CDS
CATTCTGTTTATCCTCATCC+GGG 0.523411 8.2:-21170604 None:intergenic
GTAGCGACGTGTGGCTGGGA+CGG 0.525013 8.2:+21171154 MS.gene011447:CDS
CCCATAGTTGGTCATAGGTA+GGG 0.525817 8.2:-21169656 None:intergenic
TTGGTCATAGGTAGGGTTGA+AGG 0.527966 8.2:-21169649 None:intergenic
CGCGCCTCCGAAAGATGCTA+AGG 0.529557 8.2:+21170241 MS.gene011447:CDS
CTAATATACTTTATAACCAC+GGG 0.530865 8.2:-21170806 None:intergenic
CTTGGAGCGGACATACAAAA+GGG 0.531466 8.2:+21170306 MS.gene011447:CDS
AAGGCGACAAGGTGTTGAGT+TGG 0.535225 8.2:-21169630 None:intergenic
TGTCATGTCGGGAGATGGTG+AGG 0.538558 8.2:+21171024 MS.gene011447:CDS
TGATAAGAAGATTGTTCAGT+GGG 0.538924 8.2:+21170646 MS.gene011447:CDS
ATAAGAAGAGTCCTTGGGCT+GGG 0.539663 8.2:+21170042 MS.gene011447:CDS
GATTGAGAATCCAGCTTCTG+AGG 0.541239 8.2:+21170004 MS.gene011447:CDS
TTATGTTGTGAAGCTTAACC+CGG 0.541534 8.2:+21170586 MS.gene011447:CDS
AAGGTGTTGAGTTGGGTCGA+TGG 0.542762 8.2:-21169622 None:intergenic
TGGGTCGATGGGTTTAGAGA+GGG 0.542777 8.2:-21169610 None:intergenic
GGTATGCGTAACCACAAACT+TGG 0.542950 8.2:+21169729 MS.gene011447:CDS
GCATGGTGTCGTCGACTTTG+GGG 0.545386 8.2:-21169560 None:intergenic
GAAGAATAAGAAGAGTCCTT+GGG 0.545960 8.2:+21170037 MS.gene011447:CDS
GTTGTTATCAACAAAAGTAA+TGG 0.548421 8.2:-21170726 None:intergenic
CTTTAGCGTAAGGGTGAGAC+GGG 0.549707 8.2:-21169692 None:intergenic
TGACAAGTCCCTCAGGGTAT+GGG 0.550285 8.2:+21170772 MS.gene011447:CDS
TTATATCGACGTTCTCCACT+GGG 0.551618 8.2:+21170555 MS.gene011447:CDS
CCTTCCTTCTTCCCAGCCCA+AGG 0.553576 8.2:-21170053 None:intergenic
CACACCGCGAACAGAAGAAG+AGG 0.557884 8.2:+21169907 MS.gene011447:CDS
TGCTGTTCATCAAAGAGGAA+AGG 0.560443 8.2:-21169777 None:intergenic
GGGACGGGTTGATAAAGTAC+TGG 0.561357 8.2:+21171170 MS.gene011447:CDS
GGTTAAGCTTCACAACATAA+GGG 0.563836 8.2:-21170583 None:intergenic
CCTTGGGCTGGGAAGAAGGA+AGG 0.564772 8.2:+21170053 MS.gene011447:CDS
CGGCGAGCCAATTCGCGTTG+GGG 0.566063 8.2:-21170868 None:intergenic
CCCTACCTATGACCAACTAT+GGG 0.566642 8.2:+21169656 MS.gene011447:CDS
GGGAAGAAGGAAGGTTTACA+AGG 0.566983 8.2:+21170062 MS.gene011447:CDS
AATAAGAAGAGTCCTTGGGC+TGG 0.567302 8.2:+21170041 MS.gene011447:CDS
GACATGACAAAACGTCCATC+CGG 0.567963 8.2:-21171010 None:intergenic
AAAGAGGAAAGGGATTATCA+AGG 0.572402 8.2:+21170206 MS.gene011447:CDS
TTGGGATACCGAAACAGGGC+AGG 0.573233 8.2:+21170532 MS.gene011447:CDS
GGCTACAGTTAGGGTTAGCA+TGG 0.574144 8.2:-21169577 None:intergenic
AGATTCTTATTTATAGCACA+AGG 0.575025 8.2:+21170909 MS.gene011447:CDS
GAAGGCATAGAGTGCATATG+TGG 0.575203 8.2:-21170833 None:intergenic
CCGATGTAATTTAACGCAGA+AGG 0.577079 8.2:-21169834 None:intergenic
AAGAGTATGATCAGCATTTG+GGG 0.578509 8.2:+21170693 MS.gene011447:CDS
TGTGAAGCTTAACCCGGATG+AGG 0.580826 8.2:+21170592 MS.gene011447:CDS
TGTCACGAAGGCGTTACCAT+CGG 0.581186 8.2:+21171100 MS.gene011447:CDS
TAAATGTATGAGGACTTACA+TGG 0.581377 8.2:+21170424 MS.gene011447:CDS
AGCAGCGTTATTCTTCTGCA+AGG 0.583382 8.2:-21169868 None:intergenic
AGAATCCAGCTTCTGAGGCG+TGG 0.583927 8.2:+21170009 MS.gene011447:CDS
ACTAATATACTTTATAACCA+CGG 0.592566 8.2:-21170807 None:intergenic
GCTAAAGACGGTTTAGCCCA+AGG 0.595353 8.2:+21169708 MS.gene011447:CDS
CTCGCCTTAGCATCTTTCGG+AGG 0.597269 8.2:-21170245 None:intergenic
GCTACTTTGCTCTGTTCCAG+AGG 0.598337 8.2:-21171136 None:intergenic
GACGAAAATAACGACGAAGA+GGG 0.600243 8.2:+21169975 MS.gene011447:CDS
TGTTATGCTGTTCATCAAAG+AGG 0.601244 8.2:-21169782 None:intergenic
TCTGTTCCAGAGGATGCCAC+TGG 0.603366 8.2:-21171126 None:intergenic
CATGGTGTCGTCGACTTTGG+GGG 0.604119 8.2:-21169559 None:intergenic
AGGAAAGGGATTATCAAGGT+AGG 0.608842 8.2:+21170210 MS.gene011447:CDS
CTAAACCGTCTTTAGCGTAA+GGG 0.612580 8.2:-21169701 None:intergenic
TTGGGGTGAAGCGAAATGGA+AGG 0.612660 8.2:-21170851 None:intergenic
CCTTCTGCGTTAAATTACAT+CGG 0.614925 8.2:+21169834 MS.gene011447:CDS
TCTTTAGCGTAAGGGTGAGA+CGG 0.615894 8.2:-21169693 None:intergenic
GTCATGTCGGGAGATGGTGA+GGG 0.616926 8.2:+21171025 MS.gene011447:CDS
TTCAGTGGGATATGAATACA+GGG 0.624256 8.2:+21170660 MS.gene011447:CDS
AGGTAGGGTTGAAGGCGACA+AGG 0.626351 8.2:-21169641 None:intergenic
ACCATACTCCCATACCCTGA+GGG 0.627909 8.2:-21170780 None:intergenic
TAGTGATGACAAGTCCCTCA+GGG 0.628378 8.2:+21170766 MS.gene011447:CDS
AGGATGCCACTGGCAACCGA+TGG 0.645652 8.2:-21171116 None:intergenic
TCTCACCCTTACGCTAAAGA+CGG 0.646041 8.2:+21169696 MS.gene011447:CDS
AGATTGGTGCATACTTGGAG+CGG 0.649087 8.2:+21170293 MS.gene011447:CDS
GCGTTACCATCGGTTGCCAG+TGG 0.652062 8.2:+21171110 MS.gene011447:CDS
GATTCTTATTTATAGCACAA+GGG 0.653583 8.2:+21170910 MS.gene011447:CDS
GAGATGGTGAGGGTAAGTGT+TGG 0.656084 8.2:+21171035 MS.gene011447:CDS
CAGAGCAAAGTAGCGACGTG+TGG 0.656241 8.2:+21171145 MS.gene011447:CDS
CGACGAAAATAACGACGAAG+AGG 0.657011 8.2:+21169974 MS.gene011447:CDS
GTGATAAGAAGATTGTTCAG+TGG 0.659340 8.2:+21170645 MS.gene011447:CDS
GTCTAGCAGGAGACATGTGA+AGG 0.678980 8.2:+21171451 MS.gene011447:CDS
AAATGTATGAGGACTTACAT+GGG 0.686630 8.2:+21170425 MS.gene011447:CDS
ATGGGAGTATGGTATTCCCG+TGG 0.688322 8.2:+21170790 MS.gene011447:CDS
TTGGAGCGGACATACAAAAG+GGG 0.692861 8.2:+21170307 MS.gene011447:CDS
AGAACTCTCAAGTGTCACGA+AGG 0.693137 8.2:+21171088 MS.gene011447:CDS
AGTATTGGGATACCGAAACA+GGG 0.695845 8.2:+21170528 MS.gene011447:CDS
TACCATACTCCCATACCCTG+AGG 0.704189 8.2:-21170781 None:intergenic
AGAGTATGATCAGCATTTGG+GGG 0.704600 8.2:+21170694 MS.gene011447:CDS
AACATAAGGGATCTTCCCAG+TGG 0.720474 8.2:-21170570 None:intergenic
AGATCAGAAGAAATACGCTG+AGG 0.728271 8.2:+21170097 MS.gene011447:CDS
CTGGTTATCCAAGCTCTGCG+CGG 0.754282 8.2:-21170888 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGATAAGAATATTAAGTAT+TGG + chr8.2:21170513-21170532 MS.gene011447:CDS 15.0%
!! TGATAAGAATATTAAGTATT+GGG + chr8.2:21170514-21170533 MS.gene011447:CDS 15.0%
!! ACTAATATACTTTATAACCA+CGG - chr8.2:21170810-21170829 None:intergenic 20.0%
!! TAAGACTCTGTAATTATATA+TGG - chr8.2:21171217-21171236 None:intergenic 20.0%
!! TACACAAAATTCTATCAAAA+TGG - chr8.2:21171307-21171326 None:intergenic 20.0%
!! TATTCAATTCAAGCTAATAT+AGG + chr8.2:21171331-21171350 MS.gene011447:intron 20.0%
!! TTAGATTGCATCAAATTATA+GGG + chr8.2:21171394-21171413 MS.gene011447:intron 20.0%
!! TTTAGATTGCATCAAATTAT+AGG + chr8.2:21171393-21171412 MS.gene011447:intron 20.0%
!!! CATAACACCTTTTTAAAATT+CGG + chr8.2:21169798-21169817 MS.gene011447:CDS 20.0%
!!! GATATTTGTTTTACTAATGA+TGG + chr8.2:21170467-21170486 MS.gene011447:CDS 20.0%
!!! TTTTGATAGAATTTTGTGTA+TGG + chr8.2:21171307-21171326 MS.gene011447:intron 20.0%
! ATTCTCTTCTTTCTTCTTAA+GGG - chr8.2:21169943-21169962 None:intergenic 25.0%
! CTAATATACTTTATAACCAC+GGG - chr8.2:21170809-21170828 None:intergenic 25.0%
! GTTGTTATCAACAAAAGTAA+TGG - chr8.2:21170729-21170748 None:intergenic 25.0%
! TTCAACTTAACAAAAAGAAG+AGG + chr8.2:21170939-21170958 MS.gene011447:CDS 25.0%
! TTGTGCTATAAATAAGAATC+TGG - chr8.2:21170910-21170929 None:intergenic 25.0%
!! AGATTCTTATTTATAGCACA+AGG + chr8.2:21170909-21170928 MS.gene011447:CDS 25.0%
!! GATAGTCATCATTAGTTTAT+TGG + chr8.2:21171421-21171440 MS.gene011447:CDS 25.0%
!! GATTCTTATTTATAGCACAA+GGG + chr8.2:21170910-21170929 MS.gene011447:CDS 25.0%
!!! TTACTTTTGTTGATAACAAC+AGG + chr8.2:21170729-21170748 MS.gene011447:CDS 25.0%
!!! TTGTTTTATACCAAAGAGAT+TGG + chr8.2:21170277-21170296 MS.gene011447:CDS 25.0%
AAATGTATGAGGACTTACAT+GGG + chr8.2:21170425-21170444 MS.gene011447:CDS 30.0%
CATTCTCTTCTTTCTTCTTA+AGG - chr8.2:21169944-21169963 None:intergenic 30.0%
GGATACTAAGGTTAAGATTT+GGG + chr8.2:21170385-21170404 MS.gene011447:CDS 30.0%
TAAATGTATGAGGACTTACA+TGG + chr8.2:21170424-21170443 MS.gene011447:CDS 30.0%
TGATAAGAAGATTGTTCAGT+GGG + chr8.2:21170646-21170665 MS.gene011447:CDS 30.0%
TGGATACTAAGGTTAAGATT+TGG + chr8.2:21170384-21170403 MS.gene011447:CDS 30.0%
! GGATAAACAGAATGTTTTGT+TGG + chr8.2:21170613-21170632 MS.gene011447:CDS 30.0%
!! AGCGTAACCGAATTTTAAAA+AGG - chr8.2:21169808-21169827 None:intergenic 30.0%
!!! AAGGATAAGAGTACTTTTCA+TGG + chr8.2:21170182-21170201 MS.gene011447:CDS 30.0%
!!! AGGATAAGAGTACTTTTCAT+GGG + chr8.2:21170183-21170202 MS.gene011447:CDS 30.0%
!!! ATTAGGTTTTTTCCGAATTC+GGG + chr8.2:21170338-21170357 MS.gene011447:CDS 30.0%
!!! GATTAGGTTTTTTCCGAATT+CGG + chr8.2:21170337-21170356 MS.gene011447:CDS 30.0%
AAAGAGGAAAGGGATTATCA+AGG + chr8.2:21170206-21170225 MS.gene011447:CDS 35.0%
AACAAAAAGAAGAGGTTTGC+TGG + chr8.2:21170947-21170966 MS.gene011447:CDS 35.0%
AAGAAAGGCGAAGAAAAAAG+TGG + chr8.2:21170131-21170150 MS.gene011447:CDS 35.0%
ACAAATATCCCTAACAGCTT+TGG - chr8.2:21170456-21170475 None:intergenic 35.0%
ACATTCTGTTTATCCTCATC+CGG - chr8.2:21170608-21170627 None:intergenic 35.0%
AGAATCAAATGACCCGAATT+CGG - chr8.2:21170353-21170372 None:intergenic 35.0%
AGGTTTACAAGGAGAGTTAA+CGG + chr8.2:21170073-21170092 MS.gene011447:CDS 35.0%
CCTTCTGCGTTAAATTACAT+CGG + chr8.2:21169834-21169853 MS.gene011447:CDS 35.0%
GAAGAATAAGAAGAGTCCTT+GGG + chr8.2:21170037-21170056 MS.gene011447:CDS 35.0%
GGTTAAGCTTCACAACATAA+GGG - chr8.2:21170586-21170605 None:intergenic 35.0%
GTGATAAGAAGATTGTTCAG+TGG + chr8.2:21170645-21170664 MS.gene011447:CDS 35.0%
TCAACACTGGTAAATGTATG+AGG + chr8.2:21170414-21170433 MS.gene011447:CDS 35.0%
TGAAAAAGTTGAGGCTGTTA+AGG + chr8.2:21170163-21170182 MS.gene011447:CDS 35.0%
TGAAGAATAAGAAGAGTCCT+TGG + chr8.2:21170036-21170055 MS.gene011447:CDS 35.0%
TGTTATGCTGTTCATCAAAG+AGG - chr8.2:21169785-21169804 None:intergenic 35.0%
TTATGTTGTGAAGCTTAACC+CGG + chr8.2:21170586-21170605 MS.gene011447:CDS 35.0%
TTCAGTGGGATATGAATACA+GGG + chr8.2:21170660-21170679 MS.gene011447:CDS 35.0%
! AAGAGTATGATCAGCATTTG+GGG + chr8.2:21170693-21170712 MS.gene011447:CDS 35.0%
! CAAGAGTATGATCAGCATTT+GGG + chr8.2:21170692-21170711 MS.gene011447:CDS 35.0%
! TCAAGAGTATGATCAGCATT+TGG + chr8.2:21170691-21170710 MS.gene011447:CDS 35.0%
! TTTTCATGGGAAAGAGGAAA+GGG + chr8.2:21170196-21170215 MS.gene011447:CDS 35.0%
! TTTTTCTTCGCCTTTCTTCT+TGG - chr8.2:21170129-21170148 None:intergenic 35.0%
!! AAACAGAATGTTTTGTTGGC+TGG + chr8.2:21170617-21170636 MS.gene011447:CDS 35.0%
!! ATTTGGGATGTTTTCAACAC+TGG + chr8.2:21170401-21170420 MS.gene011447:CDS 35.0%
!!! GAAGAAAAAAGTGGTTTTGG+TGG + chr8.2:21170140-21170159 MS.gene011447:CDS 35.0%
!!! TTTTGGTGGTGAAAAAGTTG+AGG + chr8.2:21170154-21170173 MS.gene011447:CDS 35.0%
AACTCAAAACCCTGATTCAC+CGG + chr8.2:21169497-21169516 MS.gene011447:CDS 40.0%
AGAGTATGATCAGCATTTGG+GGG + chr8.2:21170694-21170713 MS.gene011447:CDS 40.0%
AGATCAGAAGAAATACGCTG+AGG + chr8.2:21170097-21170116 MS.gene011447:CDS 40.0%
AGGAAAGGGATTATCAAGGT+AGG + chr8.2:21170210-21170229 MS.gene011447:CDS 40.0%
CAAAGAGATTGGTGCATACT+TGG + chr8.2:21170288-21170307 MS.gene011447:CDS 40.0%
CAAGTATGCACCAATCTCTT+TGG - chr8.2:21170290-21170309 None:intergenic 40.0%
CATTCTGTTTATCCTCATCC+GGG - chr8.2:21170607-21170626 None:intergenic 40.0%
CCGATGTAATTTAACGCAGA+AGG - chr8.2:21169837-21169856 None:intergenic 40.0%
CTAAACCGTCTTTAGCGTAA+GGG - chr8.2:21169704-21169723 None:intergenic 40.0%
GACGAAAATAACGACGAAGA+GGG + chr8.2:21169975-21169994 MS.gene011447:CDS 40.0%
GGGTTAAGCTTCACAACATA+AGG - chr8.2:21170587-21170606 None:intergenic 40.0%
GTTCAGTGGGATATGAATAC+AGG + chr8.2:21170659-21170678 MS.gene011447:CDS 40.0%
TGCTGTTCATCAAAGAGGAA+AGG - chr8.2:21169780-21169799 None:intergenic 40.0%
TTACTCGCCTTAGCATCTTT+CGG - chr8.2:21170251-21170270 None:intergenic 40.0%
TTATATCGACGTTCTCCACT+GGG + chr8.2:21170555-21170574 MS.gene011447:CDS 40.0%
TTCGGGTCATTTGATTCTCT+CGG + chr8.2:21170355-21170374 MS.gene011447:CDS 40.0%
TTTGTGGTTACGCATACCTT+GGG - chr8.2:21169727-21169746 None:intergenic 40.0%
! AGTATTGGGATACCGAAACA+GGG + chr8.2:21170528-21170547 MS.gene011447:CDS 40.0%
! ATGGGTTTAGAGAGGGTTTT+GGG - chr8.2:21169606-21169625 None:intergenic 40.0%
! CTTTTCATGGGAAAGAGGAA+AGG + chr8.2:21170195-21170214 MS.gene011447:CDS 40.0%
! GAGAATTTTCCGGTGAATCA+GGG - chr8.2:21169509-21169528 None:intergenic 40.0%
! GAGTACTTTTCATGGGAAAG+AGG + chr8.2:21170190-21170209 MS.gene011447:CDS 40.0%
! GGCGAAGAAAAAAGTGGTTT+TGG + chr8.2:21170137-21170156 MS.gene011447:CDS 40.0%
! TTGTCAGGTCAATTTTTCGC+CGG + chr8.2:21170991-21171010 MS.gene011447:CDS 40.0%
! TTTTCCTCTTCTTCTGTTCG+CGG - chr8.2:21169914-21169933 None:intergenic 40.0%
!! AAGTATTGGGATACCGAAAC+AGG + chr8.2:21170527-21170546 MS.gene011447:CDS 40.0%
!!! GGAACAAAGTTTTTGAGTGC+TGG + chr8.2:21170488-21170507 MS.gene011447:CDS 40.0%
AACATAAGGGATCTTCCCAG+TGG - chr8.2:21170573-21170592 None:intergenic 45.0%
AATAAGAAGAGTCCTTGGGC+TGG + chr8.2:21170041-21170060 MS.gene011447:CDS 45.0%
ACCCTACCTATGACCAACTA+TGG + chr8.2:21169655-21169674 MS.gene011447:CDS 45.0%
ACTTGGAGCGGACATACAAA+AGG + chr8.2:21170305-21170324 MS.gene011447:CDS 45.0%
AGAACTCTCAAGTGTCACGA+AGG + chr8.2:21171088-21171107 MS.gene011447:CDS 45.0%
AGATTGGTGCATACTTGGAG+CGG + chr8.2:21170293-21170312 MS.gene011447:CDS 45.0%
AGCAGCGTTATTCTTCTGCA+AGG - chr8.2:21169871-21169890 None:intergenic 45.0%
ATAAGAAGAGTCCTTGGGCT+GGG + chr8.2:21170042-21170061 MS.gene011447:CDS 45.0%
CAAAAGGGGTTTCTGCGATT+AGG + chr8.2:21170321-21170340 MS.gene011447:CDS 45.0%
CCCATAGTTGGTCATAGGTA+GGG - chr8.2:21169659-21169678 None:intergenic 45.0%
CCCTACCTATGACCAACTAT+GGG + chr8.2:21169656-21169675 MS.gene011447:CDS 45.0%
CGACGAAAATAACGACGAAG+AGG + chr8.2:21169974-21169993 MS.gene011447:CDS 45.0%
CGATATAACCTGCCCTGTTT+CGG - chr8.2:21170543-21170562 None:intergenic 45.0%
CTTCGACGAAACCAAGTTTG+TGG - chr8.2:21169743-21169762 None:intergenic 45.0%
CTTGGAGCGGACATACAAAA+GGG + chr8.2:21170306-21170325 MS.gene011447:CDS 45.0%
GACATGACAAAACGTCCATC+CGG - chr8.2:21171013-21171032 None:intergenic 45.0%
GATTGAGAATCCAGCTTCTG+AGG + chr8.2:21170004-21170023 MS.gene011447:CDS 45.0%
GCAATGAGTAACTGACAGTG+AGG - chr8.2:21171266-21171285 None:intergenic 45.0%
GCTAAACCGTCTTTAGCGTA+AGG - chr8.2:21169705-21169724 None:intergenic 45.0%
GGGAAGAAGGAAGGTTTACA+AGG + chr8.2:21170062-21170081 MS.gene011447:CDS 45.0%
GGGATTATCAAGGTAGGTCT+TGG + chr8.2:21170216-21170235 MS.gene011447:CDS 45.0%
GGGTCATTCCAAAGCTGTTA+GGG + chr8.2:21170445-21170464 MS.gene011447:CDS 45.0%
GGTATGCGTAACCACAAACT+TGG + chr8.2:21169729-21169748 MS.gene011447:CDS 45.0%
GTTATATCGACGTTCTCCAC+TGG + chr8.2:21170554-21170573 MS.gene011447:CDS 45.0%
GTTTGTGGTTACGCATACCT+TGG - chr8.2:21169728-21169747 None:intergenic 45.0%
TAGTGATGACAAGTCCCTCA+GGG + chr8.2:21170766-21170785 MS.gene011447:CDS 45.0%
TATTGGTCCAACAGTCTAGC+AGG + chr8.2:21171438-21171457 MS.gene011447:CDS 45.0%
TCTCACCCTTACGCTAAAGA+CGG + chr8.2:21169696-21169715 MS.gene011447:CDS 45.0%
TCTTTAGCGTAAGGGTGAGA+CGG - chr8.2:21169696-21169715 None:intergenic 45.0%
TGGGTCATTCCAAAGCTGTT+AGG + chr8.2:21170444-21170463 MS.gene011447:CDS 45.0%
TGTTGCTGGATATGCTTGTC+AGG + chr8.2:21170976-21170995 MS.gene011447:CDS 45.0%
TTGGAGCGGACATACAAAAG+GGG + chr8.2:21170307-21170326 MS.gene011447:CDS 45.0%
TTGGTCATAGGTAGGGTTGA+AGG - chr8.2:21169652-21169671 None:intergenic 45.0%
TTTGATTCTCTCGGCTGGTA+TGG + chr8.2:21170364-21170383 MS.gene011447:CDS 45.0%
TTTGCTGGACACATTGTTGC+TGG + chr8.2:21170962-21170981 MS.gene011447:CDS 45.0%
! GAAGGCATAGAGTGCATATG+TGG - chr8.2:21170836-21170855 None:intergenic 45.0%
! GATGGACGTTTTGTCATGTC+GGG + chr8.2:21171013-21171032 MS.gene011447:CDS 45.0%
! GGAGAATTTTCCGGTGAATC+AGG - chr8.2:21169510-21169529 None:intergenic 45.0%
! GGATGGACGTTTTGTCATGT+CGG + chr8.2:21171012-21171031 MS.gene011447:CDS 45.0%
! TGGGTTTAGAGAGGGTTTTG+GGG - chr8.2:21169605-21169624 None:intergenic 45.0%
!! GATGGGTTTAGAGAGGGTTT+TGG - chr8.2:21169607-21169626 None:intergenic 45.0%
!! GTAAGTGTTGGTTCTGGGAT+TGG + chr8.2:21171047-21171066 MS.gene011447:CDS 45.0%
!! TGAGGGTAAGTGTTGGTTCT+GGG + chr8.2:21171042-21171061 MS.gene011447:CDS 45.0%
!!! GGTGAATCAGGGTTTTGAGT+TGG - chr8.2:21169498-21169517 None:intergenic 45.0%
!!! TTTAGAGAGGGTTTTGGGGT+CGG - chr8.2:21169601-21169620 None:intergenic 45.0%
AATAACCACGCCTCAGAAGC+TGG - chr8.2:21170017-21170036 None:intergenic 50.0%
ACCATACTCCCATACCCTGA+GGG - chr8.2:21170783-21170802 None:intergenic 50.0%
ATGACAAGTCCCTCAGGGTA+TGG + chr8.2:21170771-21170790 MS.gene011447:CDS 50.0%
CAATACTCCGACAACGATCC+AGG + chr8.2:21169468-21169487 MS.gene011447:CDS 50.0%
CATGTCTCCTGCTAGACTGT+TGG - chr8.2:21171448-21171467 None:intergenic 50.0%
CTAGTGATGACAAGTCCCTC+AGG + chr8.2:21170765-21170784 MS.gene011447:CDS 50.0%
CTCGGCTGGTATGGATACTA+AGG + chr8.2:21170373-21170392 MS.gene011447:CDS 50.0%
CTGGATCGTTGTCGGAGTAT+TGG - chr8.2:21169470-21169489 None:intergenic 50.0%
CTTTAGCGTAAGGGTGAGAC+GGG - chr8.2:21169695-21169714 None:intergenic 50.0%
GAGATGGTGAGGGTAAGTGT+TGG + chr8.2:21171035-21171054 MS.gene011447:CDS 50.0%
GCCCATAGTTGGTCATAGGT+AGG - chr8.2:21169660-21169679 None:intergenic 50.0%
GCTAAAGACGGTTTAGCCCA+AGG + chr8.2:21169708-21169727 MS.gene011447:CDS 50.0%
GGTCATTTGATTCTCTCGGC+TGG + chr8.2:21170359-21170378 MS.gene011447:CDS 50.0%
GTCTAGCAGGAGACATGTGA+AGG + chr8.2:21171451-21171470 MS.gene011447:CDS 50.0%
TACCATACTCCCATACCCTG+AGG - chr8.2:21170784-21170803 None:intergenic 50.0%
TCTTCTTCTGTTCGCGGTGT+GGG - chr8.2:21169908-21169927 None:intergenic 50.0%
TGACAAGTCCCTCAGGGTAT+GGG + chr8.2:21170772-21170791 MS.gene011447:CDS 50.0%
TGGTGAACCTGGATCGTTGT+CGG - chr8.2:21169478-21169497 None:intergenic 50.0%
TGTGAAGCTTAACCCGGATG+AGG + chr8.2:21170592-21170611 MS.gene011447:CDS 50.0%
TTGGGGTGAAGCGAAATGGA+AGG - chr8.2:21170854-21170873 None:intergenic 50.0%
! AGACGGGGTGGAGAATTTTC+CGG - chr8.2:21169519-21169538 None:intergenic 50.0%
! ATGGGAGTATGGTATTCCCG+TGG + chr8.2:21170790-21170809 MS.gene011447:CDS 50.0%
! CAGGTCAATTTTTCGCCGGA+TGG + chr8.2:21170995-21171014 MS.gene011447:CDS 50.0%
! CGTTTTGTCATGTCGGGAGA+TGG + chr8.2:21171019-21171038 MS.gene011447:CDS 50.0%
! GCTACTTTGCTCTGTTCCAG+AGG - chr8.2:21171139-21171158 None:intergenic 50.0%
! GGCTACAGTTAGGGTTAGCA+TGG - chr8.2:21169580-21169599 None:intergenic 50.0%
! TGGGTCGATGGGTTTAGAGA+GGG - chr8.2:21169613-21169632 None:intergenic 50.0%
! TTGGGTCGATGGGTTTAGAG+AGG - chr8.2:21169614-21169633 None:intergenic 50.0%
! TTTGGGGTCGGCTACAGTTA+GGG - chr8.2:21169589-21169608 None:intergenic 50.0%
!! AAGGCGACAAGGTGTTGAGT+TGG - chr8.2:21169633-21169652 None:intergenic 50.0%
!! AAGGTGTTGAGTTGGGTCGA+TGG - chr8.2:21169625-21169644 None:intergenic 50.0%
!! AGCATGGTGTCGTCGACTTT+GGG - chr8.2:21169564-21169583 None:intergenic 50.0%
!! AGGCGACAAGGTGTTGAGTT+GGG - chr8.2:21169632-21169651 None:intergenic 50.0%
!! AGGTGTTGAGTTGGGTCGAT+GGG - chr8.2:21169624-21169643 None:intergenic 50.0%
!! GGGACGGGTTGATAAAGTAC+TGG + chr8.2:21171170-21171189 MS.gene011447:CDS 50.0%
!! GTGAGGGTAAGTGTTGGTTC+TGG + chr8.2:21171041-21171060 MS.gene011447:CDS 50.0%
!! TAGCATGGTGTCGTCGACTT+TGG - chr8.2:21169565-21169584 None:intergenic 50.0%
!! TGTCACGAAGGCGTTACCAT+CGG + chr8.2:21171100-21171119 MS.gene011447:CDS 50.0%
!!! GGGTTTTGAGTTGGTGAACC+TGG - chr8.2:21169489-21169508 None:intergenic 50.0%
!!! TTTTGGGGTCGGCTACAGTT+AGG - chr8.2:21169590-21169609 None:intergenic 50.0%
AGGTAGGGTTGAAGGCGACA+AGG - chr8.2:21169644-21169663 None:intergenic 55.0%
CAAAGTAGCGACGTGTGGCT+GGG + chr8.2:21171150-21171169 MS.gene011447:CDS 55.0%
CACACCGCGAACAGAAGAAG+AGG + chr8.2:21169907-21169926 MS.gene011447:CDS 55.0%
CAGAGCAAAGTAGCGACGTG+TGG + chr8.2:21171145-21171164 MS.gene011447:CDS 55.0%
CTCGCCTTAGCATCTTTCGG+AGG - chr8.2:21170248-21170267 None:intergenic 55.0%
CTCTTCTTCTGTTCGCGGTG+TGG - chr8.2:21169909-21169928 None:intergenic 55.0%
CTGGTTATCCAAGCTCTGCG+CGG - chr8.2:21170891-21170910 None:intergenic 55.0%
GTCATGTCGGGAGATGGTGA+GGG + chr8.2:21171025-21171044 MS.gene011447:CDS 55.0%
TCCCTCAGGGTATGGGAGTA+TGG + chr8.2:21170779-21170798 MS.gene011447:CDS 55.0%
TCTGTTCCAGAGGATGCCAC+TGG - chr8.2:21171129-21171148 None:intergenic 55.0%
TGTCATGTCGGGAGATGGTG+AGG + chr8.2:21171024-21171043 MS.gene011447:CDS 55.0%
TTGGGATACCGAAACAGGGC+AGG + chr8.2:21170532-21170551 MS.gene011447:CDS 55.0%
! GAGGAGCACGCCAAGAAGAA+AGG + chr8.2:21170116-21170135 MS.gene011447:CDS 55.0%
!! AGAATCCAGCTTCTGAGGCG+TGG + chr8.2:21170009-21170028 MS.gene011447:CDS 55.0%
!! CATGGTGTCGTCGACTTTGG+GGG - chr8.2:21169562-21169581 None:intergenic 55.0%
!! GCATGGTGTCGTCGACTTTG+GGG - chr8.2:21169563-21169582 None:intergenic 55.0%
AGAACGGGATGGGAGGAGAC+GGG - chr8.2:21169535-21169554 None:intergenic 60.0%
AGGATGCCACTGGCAACCGA+TGG - chr8.2:21171119-21171138 None:intergenic 60.0%
CAACTATGGGCCCCCATCCA+AGG + chr8.2:21169669-21169688 MS.gene011447:CDS 60.0%
CAGAACGGGATGGGAGGAGA+CGG - chr8.2:21169536-21169555 None:intergenic 60.0%
CCTTCCTTCTTCCCAGCCCA+AGG - chr8.2:21170056-21170075 None:intergenic 60.0%
CGCGCCTCCGAAAGATGCTA+AGG + chr8.2:21170241-21170260 MS.gene011447:CDS 60.0%
CGCGTTGGGGTGAAGCGAAA+TGG - chr8.2:21170858-21170877 None:intergenic 60.0%
CGCTTCACCCCAACGCGAAT+TGG + chr8.2:21170861-21170880 MS.gene011447:CDS 60.0%
CTTGGATGGGGGCCCATAGT+TGG - chr8.2:21169671-21169690 None:intergenic 60.0%
GCAAAGTAGCGACGTGTGGC+TGG + chr8.2:21171149-21171168 MS.gene011447:CDS 60.0%
GGGGGCCCATAGTTGGTCAT+AGG - chr8.2:21169664-21169683 None:intergenic 60.0%
! CCTTGGGCTGGGAAGAAGGA+AGG + chr8.2:21170053-21170072 MS.gene011447:CDS 60.0%
! GAGTCCTTGGGCTGGGAAGA+AGG + chr8.2:21170049-21170068 MS.gene011447:CDS 60.0%
! GCGTTACCATCGGTTGCCAG+TGG + chr8.2:21171110-21171129 MS.gene011447:CDS 60.0%
AGGGTGAGACGGGCCTTGGA+TGG - chr8.2:21169685-21169704 None:intergenic 65.0%
CGGCGAGCCAATTCGCGTTG+GGG - chr8.2:21170871-21170890 None:intergenic 65.0%
CGGTTGCCAGTGGCATCCTC+TGG + chr8.2:21171120-21171139 MS.gene011447:CDS 65.0%
CGTAAGGGTGAGACGGGCCT+TGG - chr8.2:21169689-21169708 None:intergenic 65.0%
GAACGGGATGGGAGGAGACG+GGG - chr8.2:21169534-21169553 None:intergenic 65.0%
GCGGCGAGCCAATTCGCGTT+GGG - chr8.2:21170872-21170891 None:intergenic 65.0%
GGGTGAGACGGGCCTTGGAT+GGG - chr8.2:21169684-21169703 None:intergenic 65.0%
GGTGAGACGGGCCTTGGATG+GGG - chr8.2:21169683-21169702 None:intergenic 65.0%
GTAGCGACGTGTGGCTGGGA+CGG + chr8.2:21171154-21171173 MS.gene011447:CDS 65.0%
GTGAGACGGGCCTTGGATGG+GGG - chr8.2:21169682-21169701 None:intergenic 65.0%
TAGCGACGTGTGGCTGGGAC+GGG + chr8.2:21171155-21171174 MS.gene011447:CDS 65.0%
! CGACTTTGGGGGCGGCAGAA+CGG - chr8.2:21169551-21169570 None:intergenic 65.0%
! GACTTTGGGGGCGGCAGAAC+GGG - chr8.2:21169550-21169569 None:intergenic 65.0%
!! GGTGTCGTCGACTTTGGGGG+CGG - chr8.2:21169559-21169578 None:intergenic 65.0%
CGCGGCGAGCCAATTCGCGT+TGG - chr8.2:21170873-21170892 None:intergenic 70.0%
TGGGGGCGGCAGAACGGGAT+GGG - chr8.2:21169545-21169564 None:intergenic 70.0%
TTGGGGGCGGCAGAACGGGA+TGG - chr8.2:21169546-21169565 None:intergenic 70.0%
! TTGGCTCGCCGCGCAGAGCT+TGG + chr8.2:21170880-21170899 MS.gene011447:CDS 70.0%
CGGGATGGGAGGAGACGGGG+TGG - chr8.2:21169531-21169550 None:intergenic 75.0%
GGGCGGCAGAACGGGATGGG+AGG - chr8.2:21169542-21169561 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 21169453 21171481 21169453 ID=MS.gene011447
chr8.2 mRNA 21169453 21171481 21169453 ID=MS.gene011447.t1;Parent=MS.gene011447
chr8.2 exon 21169453 21171191 21169453 ID=MS.gene011447.t1.exon1;Parent=MS.gene011447.t1
chr8.2 CDS 21169453 21171191 21169453 ID=cds.MS.gene011447.t1;Parent=MS.gene011447.t1
chr8.2 exon 21171415 21171481 21171415 ID=MS.gene011447.t1.exon2;Parent=MS.gene011447.t1
chr8.2 CDS 21171415 21171481 21171415 ID=cds.MS.gene011447.t1;Parent=MS.gene011447.t1
Gene Sequence

>MS.gene011447

ATGGATCTACTCAACCAATACTCCGACAACGATCCAGGTTCACCAACTCAAAACCCTGATTCACCGGAAAATTCTCCACCCCGTCTCCTCCCATCCCGTTCTGCCGCCCCCAAAGTCGACGACACCATGCTAACCCTAACTGTAGCCGACCCCAAAACCCTCTCTAAACCCATCGACCCAACTCAACACCTTGTCGCCTTCAACCCTACCTATGACCAACTATGGGCCCCCATCCAAGGCCCGTCTCACCCTTACGCTAAAGACGGTTTAGCCCAAGGTATGCGTAACCACAAACTTGGTTTCGTCGAAGATGCTAACATTGAACCTTTCCTCTTTGATGAACAGCATAACACCTTTTTAAAATTCGGTTACGCTGCTGATCCTTCTGCGTTAAATTACATCGGTGATTTCGATGCCTTGCAGAAGAATAACGCTGCTTCTGTTTACAATATCCCACACCGCGAACAGAAGAAGAGGAAAATTGAATCCCTTAAGAAGAAAGAAGAGAATGATGATGAAGACGACGAAAATAACGACGAAGAGGGTGTTGAGATTGAGAATCCAGCTTCTGAGGCGTGGTTATTGAAGAATAAGAAGAGTCCTTGGGCTGGGAAGAAGGAAGGTTTACAAGGAGAGTTAACGGAAGATCAGAAGAAATACGCTGAGGAGCACGCCAAGAAGAAAGGCGAAGAAAAAAGTGGTTTTGGTGGTGAAAAAGTTGAGGCTGTTAAGGATAAGAGTACTTTTCATGGGAAAGAGGAAAGGGATTATCAAGGTAGGTCTTGGATCGCGCCTCCGAAAGATGCTAAGGCGAGTAATGATCATTGTTTTATACCAAAGAGATTGGTGCATACTTGGAGCGGACATACAAAAGGGGTTTCTGCGATTAGGTTTTTTCCGAATTCGGGTCATTTGATTCTCTCGGCTGGTATGGATACTAAGGTTAAGATTTGGGATGTTTTCAACACTGGTAAATGTATGAGGACTTACATGGGTCATTCCAAAGCTGTTAGGGATATTTGTTTTACTAATGATGGAACAAAGTTTTTGAGTGCTGGTTATGATAAGAATATTAAGTATTGGGATACCGAAACAGGGCAGGTTATATCGACGTTCTCCACTGGGAAGATCCCTTATGTTGTGAAGCTTAACCCGGATGAGGATAAACAGAATGTTTTGTTGGCTGGTATGAGTGATAAGAAGATTGTTCAGTGGGATATGAATACAGGGCAGATAACTCAAGAGTATGATCAGCATTTGGGGGCTGTCAATACCATTACTTTTGTTGATAACAACAGGAGATTTGTTACTTCTAGTGATGACAAGTCCCTCAGGGTATGGGAGTATGGTATTCCCGTGGTTATAAAGTATATTAGTGAGCCACATATGCACTCTATGCCTTCCATTTCGCTTCACCCCAACGCGAATTGGCTCGCCGCGCAGAGCTTGGATAACCAGATTCTTATTTATAGCACAAGGGAGAAGTTTCAACTTAACAAAAAGAAGAGGTTTGCTGGACACATTGTTGCTGGATATGCTTGTCAGGTCAATTTTTCGCCGGATGGACGTTTTGTCATGTCGGGAGATGGTGAGGGTAAGTGTTGGTTCTGGGATTGGAAGAGTTGCAAAGTCTTTAGAACTCTCAAGTGTCACGAAGGCGTTACCATCGGTTGCCAGTGGCATCCTCTGGAACAGAGCAAAGTAGCGACGTGTGGCTGGGACGGGTTGATAAAGTACTGGTAAGTAAACTCTCATGCTGTGCCATATATAATTACAGAGTCTTATATAGTATGTTGTTCTTTGAAACATGCCTCACTGTCAGTTACTCATTGCATGCTAGTTTTTCTGTTACCATTTTGATAGAATTTTGTGTATGGTTATTCAATTCAAGCTAATATAGGTCTCTAGTTCATTTAGCTCATAACACATCTCTTAACTTCTTTAGATTGCATCAAATTATAGGGTCATGATAGTCATCATTAGTTTATTGGTCCAACAGTCTAGCAGGAGACATGTGAAGGTGTTTTGA

Protein sequence

>MS.gene011447.t1

MDLLNQYSDNDPGSPTQNPDSPENSPPRLLPSRSAAPKVDDTMLTLTVADPKTLSKPIDPTQHLVAFNPTYDQLWAPIQGPSHPYAKDGLAQGMRNHKLGFVEDANIEPFLFDEQHNTFLKFGYAADPSALNYIGDFDALQKNNAASVYNIPHREQKKRKIESLKKKEENDDEDDENNDEEGVEIENPASEAWLLKNKKSPWAGKKEGLQGELTEDQKKYAEEHAKKKGEEKSGFGGEKVEAVKDKSTFHGKEERDYQGRSWIAPPKDAKASNDHCFIPKRLVHTWSGHTKGVSAIRFFPNSGHLILSAGMDTKVKIWDVFNTGKCMRTYMGHSKAVRDICFTNDGTKFLSAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDEDKQNVLLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISLHPNANWLAAQSLDNQILIYSTREKFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVTIGCQWHPLEQSKVATCGWDGLIKYWVMIVIISLLVQQSSRRHVKVF