Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012096.t1 | XP_003629340.1 | 97.1 | 244 | 7 | 0 | 10 | 253 | 9 | 252 | 1.10E-132 | 482.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012096.t1 | Q9SL43 | 65.6 | 250 | 81 | 2 | 8 | 253 | 6 | 254 | 2.1e-92 | 340.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012096.t1 | G7LCY5 | 97.1 | 244 | 7 | 0 | 10 | 253 | 9 | 252 | 7.8e-133 | 482.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene012096 | MS.gene30166 | PPI |
| MS.gene012096 | MS.gene027087 | PPI |
| MS.gene82727 | MS.gene012096 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012096.t1 | MTR_8g076060 | 97.131 | 244 | 7 | 0 | 10 | 253 | 9 | 252 | 3.60e-179 | 492 |
| MS.gene012096.t1 | MTR_8g076060 | 96.089 | 179 | 7 | 0 | 10 | 188 | 9 | 187 | 3.52e-128 | 361 |
| MS.gene012096.t1 | MTR_3g075380 | 42.208 | 154 | 84 | 2 | 41 | 190 | 17 | 169 | 4.49e-33 | 119 |
| MS.gene012096.t1 | MTR_3g051460 | 41.333 | 150 | 83 | 2 | 52 | 197 | 19 | 167 | 3.88e-28 | 106 |
| MS.gene012096.t1 | MTR_3g051460 | 41.333 | 150 | 83 | 2 | 52 | 197 | 36 | 184 | 4.67e-28 | 106 |
| MS.gene012096.t1 | MTR_3g051460 | 41.333 | 150 | 83 | 2 | 52 | 197 | 71 | 219 | 1.75e-27 | 105 |
| MS.gene012096.t1 | MTR_5g092680 | 42.000 | 150 | 82 | 2 | 52 | 197 | 36 | 184 | 4.41e-27 | 103 |
| MS.gene012096.t1 | MTR_5g092680 | 42.000 | 150 | 82 | 2 | 52 | 197 | 98 | 246 | 3.35e-26 | 103 |
| MS.gene012096.t1 | MTR_5g092680 | 42.000 | 150 | 82 | 2 | 52 | 197 | 99 | 247 | 3.42e-26 | 103 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012096.t1 | AT2G18030 | 65.600 | 250 | 81 | 2 | 8 | 253 | 6 | 254 | 3.05e-121 | 346 |
| MS.gene012096.t1 | AT2G18030 | 62.703 | 185 | 64 | 2 | 8 | 188 | 6 | 189 | 2.27e-80 | 240 |
| MS.gene012096.t1 | AT5G61640 | 38.235 | 170 | 100 | 2 | 35 | 200 | 19 | 187 | 1.04e-29 | 110 |
| MS.gene012096.t1 | AT5G61640 | 38.235 | 170 | 100 | 2 | 35 | 200 | 46 | 214 | 1.44e-29 | 111 |
| MS.gene012096.t1 | AT5G07460 | 38.922 | 167 | 93 | 3 | 35 | 193 | 31 | 196 | 6.49e-28 | 106 |
| MS.gene012096.t1 | AT4G25130 | 41.176 | 153 | 85 | 2 | 52 | 200 | 92 | 243 | 4.68e-27 | 105 |
| MS.gene012096.t1 | AT5G07470 | 37.647 | 170 | 95 | 3 | 35 | 197 | 19 | 184 | 4.87e-26 | 101 |
Find 74 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTCGCTCTCGGAAGTTTC+TGG | 0.121780 | 8.4:-29458923 | MS.gene012096:CDS |
| ACATTCCTTCTTCAGCTAAT+TGG | 0.146256 | 8.4:-29455742 | MS.gene012096:CDS |
| GGGAACTACTTGATATATTT+TGG | 0.185058 | 8.4:-29457487 | MS.gene012096:CDS |
| GATCCACGGTTAATTAGTTT+TGG | 0.241655 | 8.4:-29457509 | MS.gene012096:CDS |
| ATCACCAAAGCTTCGATATT+CGG | 0.255220 | 8.4:+29458821 | None:intergenic |
| TCTTTGCATCAATTTGCTTT+TGG | 0.259160 | 8.4:+29455635 | None:intergenic |
| AAGCTTCGATATTCGGGATT+AGG | 0.290129 | 8.4:+29458828 | None:intergenic |
| ACCTGGTGCTCAGGCTCTGC+CGG | 0.306819 | 8.4:+29457176 | None:intergenic |
| CATTCCTTCTTCAGCTAATT+GGG | 0.328415 | 8.4:-29455741 | MS.gene012096:CDS |
| CAAACACCTGCCTGGGATCA+TGG | 0.346817 | 8.4:+29457459 | None:intergenic |
| AGGACCACGGTGGGTTATTC+CGG | 0.351538 | 8.4:-29458861 | MS.gene012096:CDS |
| TCACCAAAGCTTCGATATTC+GGG | 0.364093 | 8.4:+29458822 | None:intergenic |
| TGGAGATCCGAAGCTGTGTT+CGG | 0.368348 | 8.4:-29458903 | MS.gene012096:CDS |
| TGATCACGCTGAATCGGTTC+AGG | 0.380894 | 8.4:-29458802 | MS.gene012096:intron |
| GATCTCTCGAGCTCCTCTTC+AGG | 0.389871 | 8.4:+29455712 | None:intergenic |
| GCCTTGGCCAAACACCTGCC+TGG | 0.393908 | 8.4:+29457451 | None:intergenic |
| CACAATGCTGCTTCTTGACC+TGG | 0.394204 | 8.4:+29457232 | None:intergenic |
| CATGATCCCAGGCAGGTGTT+TGG | 0.406390 | 8.4:-29457458 | MS.gene012096:CDS |
| GCGGGTTGAGCGACCCGATC+CGG | 0.408200 | 8.4:+29458984 | None:intergenic |
| GTTTGCAAGCGTTGTTGATC+GGG | 0.410660 | 8.4:+29458951 | None:intergenic |
| TGCAAACTGTATCCGATTCC+CGG | 0.410898 | 8.4:-29459003 | MS.gene012096:CDS |
| GGAGATCCGAAGCTGTGTTC+GGG | 0.416814 | 8.4:-29458902 | MS.gene012096:CDS |
| AATTACAGTTCCCTTAAAAT+CGG | 0.417059 | 8.4:+29455586 | None:intergenic |
| CCCGGCAGAGCCTGAGCACC+AGG | 0.421997 | 8.4:-29457177 | MS.gene012096:intron |
| GTAGAGAATGTAGTTATAGT+TGG | 0.423908 | 8.4:+29459061 | None:intergenic |
| GGTTTGCAAGCGTTGTTGAT+CGG | 0.428416 | 8.4:+29458950 | None:intergenic |
| CTGTACTGATTACCCACATC+AGG | 0.433767 | 8.4:+29457428 | None:intergenic |
| GGCTTCTGTCAGCAAAGAAC+AGG | 0.442027 | 8.4:-29457261 | MS.gene012096:CDS |
| GAAAGTCAAACCTGGTGCTC+AGG | 0.442914 | 8.4:+29457167 | None:intergenic |
| CCCAGGCAGGTGTTTGGCCA+AGG | 0.443504 | 8.4:-29457452 | MS.gene012096:CDS |
| CTTTGGTGATCACGCTGAAT+CGG | 0.455070 | 8.4:-29458808 | MS.gene012096:CDS |
| GAGCGACCCGATCCGGGAAT+CGG | 0.459972 | 8.4:+29458991 | None:intergenic |
| CTGTATCCGATTCCCGGATC+GGG | 0.464851 | 8.4:-29458997 | MS.gene012096:CDS |
| AATCCCGAATATCGAAGCTT+TGG | 0.468145 | 8.4:-29458825 | MS.gene012096:CDS |
| TGATCGGGTTGTTCGCGGGC+GGG | 0.472390 | 8.4:+29458966 | None:intergenic |
| CCTTGGCCAAACACCTGCCT+GGG | 0.485328 | 8.4:+29457452 | None:intergenic |
| GTTGTTGATCGGGTTGTTCG+CGG | 0.492191 | 8.4:+29458961 | None:intergenic |
| GCTGTGTTCGGGTGTTTACC+TGG | 0.492300 | 8.4:-29458891 | MS.gene012096:CDS |
| CGGGTTGAGCGACCCGATCC+GGG | 0.494310 | 8.4:+29458985 | None:intergenic |
| ACTGTATCCGATTCCCGGAT+CGG | 0.497099 | 8.4:-29458998 | MS.gene012096:CDS |
| AACCTGGCAACAAAATTGAA+TGG | 0.501762 | 8.4:-29455688 | MS.gene012096:CDS |
| TTGTTGATCGGGTTGTTCGC+GGG | 0.502766 | 8.4:+29458962 | None:intergenic |
| CCTGGTGCTCAGGCTCTGCC+GGG | 0.514034 | 8.4:+29457177 | None:intergenic |
| GGGATTAGGTTTAGATCCAC+CGG | 0.526012 | 8.4:+29458842 | None:intergenic |
| TTTGGTCAAGCCATGATCCC+AGG | 0.532861 | 8.4:-29457469 | MS.gene012096:CDS |
| GCAAAGAACAGGAGCAAACC+AGG | 0.534889 | 8.4:-29457250 | MS.gene012096:CDS |
| TGGAACTGAAGAATCAAGAA+TGG | 0.536435 | 8.4:-29457282 | MS.gene012096:CDS |
| TTGATCGGGTTGTTCGCGGG+CGG | 0.540227 | 8.4:+29458965 | None:intergenic |
| TAAACACCCGAACACAGCTT+CGG | 0.544459 | 8.4:+29458896 | None:intergenic |
| ACTACTCAAATTCTACAACT+TGG | 0.544557 | 8.4:-29457209 | MS.gene012096:CDS |
| TCTCGAGCTCCTCTTCAGGC+AGG | 0.547751 | 8.4:+29455716 | None:intergenic |
| GATTACCCACATCAGGGCCT+TGG | 0.551890 | 8.4:+29457435 | None:intergenic |
| CTGATGTGGGTAATCAGTAC+AGG | 0.553146 | 8.4:-29457427 | MS.gene012096:intron |
| ACCGTGGTCCTCACAACACC+AGG | 0.559602 | 8.4:+29458873 | None:intergenic |
| GGTTCCCAATTAGCTGAAGA+AGG | 0.559608 | 8.4:+29455737 | None:intergenic |
| GGAGCTCGAGAGATCAAACC+TGG | 0.562118 | 8.4:-29455704 | MS.gene012096:CDS |
| GTCAAGCCATGATCCCAGGC+AGG | 0.571161 | 8.4:-29457465 | MS.gene012096:CDS |
| GTTTGGCCAAGGCCCTGATG+TGG | 0.577488 | 8.4:-29457441 | MS.gene012096:CDS |
| AATTGGGAACCTGCCTGAAG+AGG | 0.585218 | 8.4:-29455725 | MS.gene012096:CDS |
| TTTGGCCAAGGCCCTGATGT+GGG | 0.588131 | 8.4:-29457440 | MS.gene012096:CDS |
| CAAACCGCGGTATTCGCTCT+CGG | 0.597580 | 8.4:-29458933 | MS.gene012096:CDS |
| ACCACGGTGGGTTATTCCGG+TGG | 0.607349 | 8.4:-29458858 | MS.gene012096:CDS |
| ACTATACGCAATAATCGTTG+TGG | 0.631984 | 8.4:+29459282 | None:intergenic |
| GGTGTTTACCTGGTGTTGTG+AGG | 0.638048 | 8.4:-29458881 | MS.gene012096:CDS |
| TGTACTGATTACCCACATCA+GGG | 0.643763 | 8.4:+29457429 | None:intergenic |
| ACAACTTGGAACATTTCACC+CGG | 0.654984 | 8.4:-29457195 | MS.gene012096:CDS |
| TCCCCAAAACTAATTAACCG+TGG | 0.658842 | 8.4:+29457506 | None:intergenic |
| TTCAGGTTGAGTATGATCCA+CGG | 0.660705 | 8.4:-29457523 | MS.gene012096:intron |
| ACCTGGTGTTGTGAGGACCA+CGG | 0.679057 | 8.4:-29458874 | MS.gene012096:CDS |
| TCAACAACGCTTGCAAACCG+CGG | 0.689694 | 8.4:-29458946 | MS.gene012096:CDS |
| GGTGTTGTGAGGACCACGGT+GGG | 0.717288 | 8.4:-29458870 | MS.gene012096:CDS |
| ACTTCCGAGAGCGAATACCG+CGG | 0.721213 | 8.4:+29458929 | None:intergenic |
| TCCACCGGAATAACCCACCG+TGG | 0.761833 | 8.4:+29458857 | None:intergenic |
| TGGTGTTGTGAGGACCACGG+TGG | 0.776012 | 8.4:-29458871 | MS.gene012096:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAATTAATGTACAATTT+AGG | + | chr8.4:29458906-29458925 | None:intergenic | 10.0% |
| !! | ATTAATTAATGTACAATTTA+GGG | + | chr8.4:29458905-29458924 | None:intergenic | 10.0% |
| !! | TTATACATTAAACATTAATT+TGG | + | chr8.4:29457733-29457752 | None:intergenic | 10.0% |
| !!! | ACTTGTAATTATTTTTATTA+AGG | + | chr8.4:29456530-29456549 | None:intergenic | 10.0% |
| !! | ATAATGTAATATAACTTTGT+TGG | - | chr8.4:29457262-29457281 | MS.gene012096:CDS | 15.0% |
| !! | TTACATTATAAGATGTAATA+TGG | + | chr8.4:29457251-29457270 | None:intergenic | 15.0% |
| !!! | AATTAATTGATTTGTAATTG+TGG | - | chr8.4:29458918-29458937 | MS.gene012096:CDS | 15.0% |
| !!! | AGATCTATTATTTTTGTTAA+TGG | - | chr8.4:29457573-29457592 | MS.gene012096:intron | 15.0% |
| !!! | ATCAATGAGATTTTAAAAAA+GGG | - | chr8.4:29459262-29459281 | MS.gene012096:intron | 15.0% |
| !!! | TGATGATTTTTTTTTTTTCA+TGG | + | chr8.4:29457227-29457246 | None:intergenic | 15.0% |
| !!! | TTGTCAAAATTTTAAGATAT+AGG | - | chr8.4:29457841-29457860 | MS.gene012096:intron | 15.0% |
| !! | AAAAATACATACTGCATAAA+TGG | + | chr8.4:29456287-29456306 | None:intergenic | 20.0% |
| !! | AAAAATATGTTACACTGTAA+TGG | - | chr8.4:29457985-29458004 | MS.gene012096:intron | 20.0% |
| !! | AACAAAAATAATAGATCTGT+TGG | + | chr8.4:29457571-29457590 | None:intergenic | 20.0% |
| !! | AGTGTTAAATATAATTAGCT+TGG | + | chr8.4:29456758-29456777 | None:intergenic | 20.0% |
| !! | ATGAATAGTTAAATAAAACC+TGG | + | chr8.4:29457076-29457095 | None:intergenic | 20.0% |
| !! | TGATAAAAACAAAAAGAGAT+TGG | + | chr8.4:29456111-29456130 | None:intergenic | 20.0% |
| !! | TTTAACTATTCATCCAATAT+AGG | - | chr8.4:29457083-29457102 | MS.gene012096:intron | 20.0% |
| !!! | AAAAATGTAGATTTTACTAC+TGG | - | chr8.4:29458372-29458391 | MS.gene012096:intron | 20.0% |
| !!! | ACTTTTCAACAAAATAGTTA+GGG | + | chr8.4:29456657-29456676 | None:intergenic | 20.0% |
| !!! | ATTTTTACTAAAGATGCATT+TGG | + | chr8.4:29456460-29456479 | None:intergenic | 20.0% |
| !!! | ATTTTTATTAAGGATGTGTT+CGG | + | chr8.4:29456520-29456539 | None:intergenic | 20.0% |
| !!! | ATTTTTTTGTTACATTCAAC+TGG | - | chr8.4:29457181-29457200 | MS.gene012096:CDS | 20.0% |
| !!! | GATCAATGAGATTTTAAAAA+AGG | - | chr8.4:29459261-29459280 | MS.gene012096:intron | 20.0% |
| !!! | GTTAAGTAATTTGAAATCAT+TGG | - | chr8.4:29457038-29457057 | MS.gene012096:intron | 20.0% |
| !!! | TGTGAGTTTTTAAAAATGAT+GGG | - | chr8.4:29458419-29458438 | MS.gene012096:intron | 20.0% |
| !!! | TTGTGAGTTTTTAAAAATGA+TGG | - | chr8.4:29458418-29458437 | MS.gene012096:intron | 20.0% |
| !!! | TTTTATTGATTTTGCCATTA+TGG | - | chr8.4:29457316-29457335 | MS.gene012096:intron | 20.0% |
| ! | ACTATCTATTACTTCCTATT+AGG | - | chr8.4:29458590-29458609 | MS.gene012096:intron | 25.0% |
| ! | ATTACTGTACTACATTGTAT+AGG | + | chr8.4:29457812-29457831 | None:intergenic | 25.0% |
| ! | ATTGTATTAGCAAACCATAA+TGG | + | chr8.4:29457333-29457352 | None:intergenic | 25.0% |
| ! | GTTCAAATACATATAAACTG+AGG | - | chr8.4:29458338-29458357 | MS.gene012096:intron | 25.0% |
| ! | TATAGTCCATTTCACAAAAT+TGG | - | chr8.4:29455610-29455629 | MS.gene012096:CDS | 25.0% |
| ! | TCAGCAATTAGACAAAAAAA+CGG | + | chr8.4:29458978-29458997 | None:intergenic | 25.0% |
| ! | TCTATAATCGTAAAGAGATT+AGG | - | chr8.4:29456249-29456268 | MS.gene012096:intron | 25.0% |
| ! | TGAACTAGAAAAATCCTAAT+AGG | + | chr8.4:29458607-29458626 | None:intergenic | 25.0% |
| ! | TGATAAACAAGTTGTTCATA+TGG | - | chr8.4:29456483-29456502 | MS.gene012096:intron | 25.0% |
| !! | AAAGTTCAATTTTCTGTAGT+AGG | - | chr8.4:29459007-29459026 | MS.gene012096:CDS | 25.0% |
| !! | AAGAAACCAATTTTGTGAAA+TGG | + | chr8.4:29455619-29455638 | None:intergenic | 25.0% |
| !! | AATTTTTGTCGGTAAATAGA+TGG | + | chr8.4:29458951-29458970 | None:intergenic | 25.0% |
| !! | CACTTTTCAACAAAATAGTT+AGG | + | chr8.4:29456658-29456677 | None:intergenic | 25.0% |
| !! | GCTTTTATTAAAGATGGAAT+GGG | - | chr8.4:29456952-29456971 | MS.gene012096:intron | 25.0% |
| !! | GTTGAAAAGTGTATCTAAAT+AGG | - | chr8.4:29456667-29456686 | MS.gene012096:intron | 25.0% |
| !!! | ATATGAAGTGTTGAAAGTTT+GGG | - | chr8.4:29458699-29458718 | MS.gene012096:intron | 25.0% |
| !!! | ATGAGATTTTAAAAAAGGGT+TGG | - | chr8.4:29459266-29459285 | MS.gene012096:intron | 25.0% |
| !!! | CATGTTTTGGGAATAATTTA+TGG | - | chr8.4:29456975-29456994 | MS.gene012096:intron | 25.0% |
| !!! | GTGAGAAGTTATTATTTTGA+AGG | - | chr8.4:29456600-29456619 | MS.gene012096:intron | 25.0% |
| !!! | TCAATTTGCTTTTGGATATT+TGG | + | chr8.4:29459235-29459254 | None:intergenic | 25.0% |
| !!! | TGAAAGTTTCATTTTGGTTT+TGG | + | chr8.4:29455787-29455806 | None:intergenic | 25.0% |
| !!! | TTTCTCTGAAAGTTTCATTT+TGG | + | chr8.4:29455793-29455812 | None:intergenic | 25.0% |
| !!! | TTTTGGGAATAATTTATGGT+TGG | - | chr8.4:29456979-29456998 | MS.gene012096:intron | 25.0% |
| AATTGTTGAATGTGGTAGAT+TGG | + | chr8.4:29455706-29455725 | None:intergenic | 30.0% | |
| ACTACATTGTATAGGTTACT+AGG | + | chr8.4:29457804-29457823 | None:intergenic | 30.0% | |
| ACTACTCAAATTCTACAACT+TGG | - | chr8.4:29457666-29457685 | MS.gene012096:intron | 30.0% | |
| ACTTCTCCAAACATTCATAA+AGG | + | chr8.4:29456851-29456870 | None:intergenic | 30.0% | |
| AGTTAGGGAAAAATTATCGA+AGG | + | chr8.4:29456642-29456661 | None:intergenic | 30.0% | |
| ATGCATGTCTAAACCAAAAT+TGG | + | chr8.4:29458223-29458242 | None:intergenic | 30.0% | |
| CCATCTTTAATAAAAGCCTA+GGG | + | chr8.4:29456949-29456968 | None:intergenic | 30.0% | |
| CTTGAGAAGAGATTATAAAG+AGG | + | chr8.4:29458770-29458789 | None:intergenic | 30.0% | |
| GCCTTCAATACCAAAAATAA+TGG | + | chr8.4:29458481-29458500 | None:intergenic | 30.0% | |
| GTAGAGAATGTAGTTATAGT+TGG | + | chr8.4:29455817-29455836 | None:intergenic | 30.0% | |
| GTATGTGCATTCTTTACTTA+TGG | - | chr8.4:29456165-29456184 | MS.gene012096:intron | 30.0% | |
| GTATTGAAGGCAATTCTATT+TGG | - | chr8.4:29458490-29458509 | MS.gene012096:intron | 30.0% | |
| GTTCTGACAAAGTTCATAAA+GGG | - | chr8.4:29456809-29456828 | MS.gene012096:intron | 30.0% | |
| GTTTCCAAAAGTAACTATGT+TGG | + | chr8.4:29458836-29458855 | None:intergenic | 30.0% | |
| TACTAAAGATGCATTTGGAT+TGG | + | chr8.4:29456455-29456474 | None:intergenic | 30.0% | |
| TCCATCTTTAATAAAAGCCT+AGG | + | chr8.4:29456950-29456969 | None:intergenic | 30.0% | |
| TGCATGTCTAAACCAAAATT+GGG | + | chr8.4:29458222-29458241 | None:intergenic | 30.0% | |
| TGTTCTGACAAAGTTCATAA+AGG | - | chr8.4:29456808-29456827 | MS.gene012096:intron | 30.0% | |
| TGTTTCACTGTTACCTATAT+TGG | + | chr8.4:29457099-29457118 | None:intergenic | 30.0% | |
| TTATGAACTTTGTCAGAACA+TGG | + | chr8.4:29456808-29456827 | None:intergenic | 30.0% | |
| ! | ATTCGAGTAACACTATTTTG+AGG | - | chr8.4:29458101-29458120 | MS.gene012096:intron | 30.0% |
| ! | GGCTTTTATTAAAGATGGAA+TGG | - | chr8.4:29456951-29456970 | MS.gene012096:intron | 30.0% |
| ! | GGGAACTACTTGATATATTT+TGG | - | chr8.4:29457388-29457407 | MS.gene012096:intron | 30.0% |
| ! | TAAAAATACACCCCCAATTT+TGG | - | chr8.4:29458207-29458226 | MS.gene012096:intron | 30.0% |
| ! | TCACTGAGCTTTAACTTATT+TGG | - | chr8.4:29458879-29458898 | MS.gene012096:CDS | 30.0% |
| ! | TTAATTTGGAAAGTCAAACC+TGG | + | chr8.4:29457719-29457738 | None:intergenic | 30.0% |
| ! | TTTTCTGTAGTAGGTGAAAA+AGG | - | chr8.4:29459016-29459035 | MS.gene012096:CDS | 30.0% |
| !! | AAAACGGACTCAATTTTTGT+CGG | + | chr8.4:29458962-29458981 | None:intergenic | 30.0% |
| !! | AAACTTGCTAAAATACACCT+AGG | + | chr8.4:29456702-29456721 | None:intergenic | 30.0% |
| !! | AAAGCCAACATAGTTACTTT+TGG | - | chr8.4:29458829-29458848 | MS.gene012096:CDS | 30.0% |
| !! | ACTTTGTTGGTTTACTGATT+TGG | - | chr8.4:29457275-29457294 | MS.gene012096:CDS | 30.0% |
| !! | AGTCTGAAGAAATTTTGACA+AGG | - | chr8.4:29456547-29456566 | MS.gene012096:intron | 30.0% |
| !! | ATGGTTTGCTAATACAATTC+AGG | - | chr8.4:29457335-29457354 | MS.gene012096:intron | 30.0% |
| !! | ATTTGCTTTTGGATATTTGG+AGG | + | chr8.4:29459232-29459251 | None:intergenic | 30.0% |
| !! | GATATGAAGTGTTGAAAGTT+TGG | - | chr8.4:29458698-29458717 | MS.gene012096:intron | 30.0% |
| !! | TCTTTGCATCAATTTGCTTT+TGG | + | chr8.4:29459243-29459262 | None:intergenic | 30.0% |
| !! | TTATAGGATTAGCTTATGAC+AGG | + | chr8.4:29456368-29456387 | None:intergenic | 30.0% |
| !! | TTTGCTTTTGGATATTTGGA+GGG | + | chr8.4:29459231-29459250 | None:intergenic | 30.0% |
| !!! | AGTTTTGTTGTGGTTAAAAG+CGG | + | chr8.4:29455754-29455773 | None:intergenic | 30.0% |
| !!! | ATCCACGGTTAATTAGTTTT+GGG | - | chr8.4:29457367-29457386 | MS.gene012096:intron | 30.0% |
| !!! | GCCATTATTTTTGGTATTGA+AGG | - | chr8.4:29458477-29458496 | MS.gene012096:intron | 30.0% |
| !!! | GTTTTTTTGTCTAATTGCTG+AGG | - | chr8.4:29458977-29458996 | MS.gene012096:CDS | 30.0% |
| !!! | TAGGTGTATTTTAGCAAGTT+TGG | - | chr8.4:29456701-29456720 | MS.gene012096:intron | 30.0% |
| !!! | TCATAAAGGGTGTCATTTTT+AGG | - | chr8.4:29456822-29456841 | MS.gene012096:intron | 30.0% |
| !!! | TTAGCAAGTTTGGTTTTTCT+TGG | - | chr8.4:29456711-29456730 | MS.gene012096:intron | 30.0% |
| AAACAAGCTAGAGAACACAT+AGG | + | chr8.4:29457956-29457975 | None:intergenic | 35.0% | |
| AACCTGGCAACAAAATTGAA+TGG | - | chr8.4:29459187-29459206 | MS.gene012096:intron | 35.0% | |
| ACATTCCTTCTTCAGCTAAT+TGG | - | chr8.4:29459133-29459152 | MS.gene012096:intron | 35.0% | |
| ACGAACACCATATCCATATT+TGG | + | chr8.4:29456429-29456448 | None:intergenic | 35.0% | |
| ACTATACGCAATAATCGTTG+TGG | + | chr8.4:29455596-29455615 | None:intergenic | 35.0% | |
| ACTCAGATGTATGCAAACAT+AGG | + | chr8.4:29457781-29457800 | None:intergenic | 35.0% | |
| AGGCATCCTTTATGAATGTT+TGG | - | chr8.4:29456842-29456861 | MS.gene012096:intron | 35.0% | |
| AGGCCTATGACAAAGAATAT+TGG | + | chr8.4:29458263-29458282 | None:intergenic | 35.0% | |
| ATACTGAAATACGACTCTCA+CGG | + | chr8.4:29458069-29458088 | None:intergenic | 35.0% | |
| ATCACCAAAGCTTCGATATT+CGG | + | chr8.4:29456057-29456076 | None:intergenic | 35.0% | |
| CATGTCTAAACCAAAATTGG+GGG | + | chr8.4:29458220-29458239 | None:intergenic | 35.0% | |
| CATTCCTTCTTCAGCTAATT+GGG | - | chr8.4:29459134-29459153 | MS.gene012096:intron | 35.0% | |
| CCAATACTCAATCAATACTG+CGG | + | chr8.4:29458180-29458199 | None:intergenic | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | - | chr8.4:29458723-29458742 | MS.gene012096:intron | 35.0% | |
| GAAATCATTGGTCCATGAAA+AGG | - | chr8.4:29457050-29457069 | MS.gene012096:intron | 35.0% | |
| GAGAAGAGATTATAAAGAGG+AGG | + | chr8.4:29458767-29458786 | None:intergenic | 35.0% | |
| GCATACTCTTATTCTTGTGT+GGG | + | chr8.4:29458143-29458162 | None:intergenic | 35.0% | |
| GCATGTCTAAACCAAAATTG+GGG | + | chr8.4:29458221-29458240 | None:intergenic | 35.0% | |
| GGCCTATGACAAAGAATATT+GGG | + | chr8.4:29458262-29458281 | None:intergenic | 35.0% | |
| GGTTAGACCAAATATGGATA+TGG | - | chr8.4:29456419-29456438 | MS.gene012096:intron | 35.0% | |
| GTTTGTGTTGTGCATTCAAA+CGG | - | chr8.4:29458563-29458582 | MS.gene012096:intron | 35.0% | |
| TAAGTGCGAATTGTTGAATG+TGG | + | chr8.4:29455714-29455733 | None:intergenic | 35.0% | |
| TACAAGAAACCAAAACGACT+TGG | - | chr8.4:29455657-29455676 | MS.gene012096:CDS | 35.0% | |
| TGGAACTGAAGAATCAAGAA+TGG | - | chr8.4:29457593-29457612 | MS.gene012096:intron | 35.0% | |
| TGGCATGAGATTGAATATGA+AGG | + | chr8.4:29457514-29457533 | None:intergenic | 35.0% | |
| TGGGAATAATTTATGGTTGG+CGG | - | chr8.4:29456982-29457001 | MS.gene012096:intron | 35.0% | |
| ! | ACTGGCTTAAGGTTTAAGTA+AGG | + | chr8.4:29458283-29458302 | None:intergenic | 35.0% |
| ! | AGAAGTTTTGCATGCTTCTT+AGG | - | chr8.4:29456865-29456884 | MS.gene012096:intron | 35.0% |
| ! | ATCCATTCAATTTTGTTGCC+AGG | + | chr8.4:29459192-29459211 | None:intergenic | 35.0% |
| ! | CCCTAGGCTTTTATTAAAGA+TGG | - | chr8.4:29456946-29456965 | MS.gene012096:intron | 35.0% |
| ! | GAATCAACACCACTACATTT+TGG | + | chr8.4:29457129-29457148 | None:intergenic | 35.0% |
| ! | GCAAGTACGAATGTATTTTG+AGG | - | chr8.4:29458027-29458046 | MS.gene012096:intron | 35.0% |
| ! | TAAATAGGCTCTTTTGTCCT+AGG | - | chr8.4:29456682-29456701 | MS.gene012096:intron | 35.0% |
| ! | TACTGCGGCATTCATATTTT+TGG | + | chr8.4:29458165-29458184 | None:intergenic | 35.0% |
| ! | TGTAGGTCTGCCATTATTTT+TGG | - | chr8.4:29458468-29458487 | MS.gene012096:intron | 35.0% |
| !! | AAATGTAGTGGTGTTGATTC+TGG | - | chr8.4:29457129-29457148 | MS.gene012096:intron | 35.0% |
| !! | AACACTATTTTGAGGACAGT+GGG | - | chr8.4:29458109-29458128 | MS.gene012096:intron | 35.0% |
| !! | AATAAAACCTGGCCTTTTCA+TGG | + | chr8.4:29457065-29457084 | None:intergenic | 35.0% |
| !! | AGTAACTATGTTGGCTTTGA+TGG | + | chr8.4:29458827-29458846 | None:intergenic | 35.0% |
| !! | CTTGGTCTTGGATTGTATTT+GGG | - | chr8.4:29456729-29456748 | MS.gene012096:intron | 35.0% |
| !! | GATCCACGGTTAATTAGTTT+TGG | - | chr8.4:29457366-29457385 | MS.gene012096:intron | 35.0% |
| !! | GTAACTATGTTGGCTTTGAT+GGG | + | chr8.4:29458826-29458845 | None:intergenic | 35.0% |
| !! | GTACGAATGTATTTTGAGGA+AGG | - | chr8.4:29458031-29458050 | MS.gene012096:intron | 35.0% |
| !! | GTTACACTGTAATGGTTTTG+AGG | - | chr8.4:29457993-29458012 | MS.gene012096:intron | 35.0% |
| !! | TAACACTATTTTGAGGACAG+TGG | - | chr8.4:29458108-29458127 | MS.gene012096:intron | 35.0% |
| !! | TAACTATGTTGGCTTTGATG+GGG | + | chr8.4:29458825-29458844 | None:intergenic | 35.0% |
| !! | TATGTGTTCTCTAGCTTGTT+TGG | - | chr8.4:29457955-29457974 | MS.gene012096:intron | 35.0% |
| !! | TCTTGGTCTTGGATTGTATT+TGG | - | chr8.4:29456728-29456747 | MS.gene012096:intron | 35.0% |
| !! | TTGGGGGTGTATTTTTATAG+TGG | + | chr8.4:29458204-29458223 | None:intergenic | 35.0% |
| !!! | AGTTTGGTTTTTCTTGGTCT+TGG | - | chr8.4:29456717-29456736 | MS.gene012096:intron | 35.0% |
| !!! | TCCACGGTTAATTAGTTTTG+GGG | - | chr8.4:29457368-29457387 | MS.gene012096:intron | 35.0% |
| !!! | TGTATTTTGAGGAAGGCATT+AGG | - | chr8.4:29458038-29458057 | MS.gene012096:intron | 35.0% |
| AACACATAGGACTCGGATTA+GGG | + | chr8.4:29457943-29457962 | None:intergenic | 40.0% | |
| AAGCTTCGATATTCGGGATT+AGG | + | chr8.4:29456050-29456069 | None:intergenic | 40.0% | |
| AATCCCGAATATCGAAGCTT+TGG | - | chr8.4:29456050-29456069 | MS.gene012096:intron | 40.0% | |
| ACAACTTGGAACATTTCACC+CGG | - | chr8.4:29457680-29457699 | MS.gene012096:intron | 40.0% | |
| ACATAATCAGCGCGTTTCAA+CGG | + | chr8.4:29456393-29456412 | None:intergenic | 40.0% | |
| ACTTAAACCTTAAGCCAGTG+AGG | - | chr8.4:29458284-29458303 | MS.gene012096:intron | 40.0% | |
| ACTTGCACTTTCCTCACTAT+AGG | - | chr8.4:29458445-29458464 | MS.gene012096:intron | 40.0% | |
| ACTTTCCTCACTATAGGTGT+AGG | - | chr8.4:29458451-29458470 | MS.gene012096:intron | 40.0% | |
| AGGGCAGAATATACAAACAG+TGG | - | chr8.4:29458304-29458323 | MS.gene012096:intron | 40.0% | |
| AGGGTTATACATGTCAATCC+AGG | + | chr8.4:29456930-29456949 | None:intergenic | 40.0% | |
| ATATCACAAAGAACTGCAGC+TGG | + | chr8.4:29457490-29457509 | None:intergenic | 40.0% | |
| ATGTCAGTCAGTGATCTAAC+AGG | + | chr8.4:29459066-29459085 | None:intergenic | 40.0% | |
| ATTGAGTAGAGAGCAAGTTG+TGG | - | chr8.4:29456341-29456360 | MS.gene012096:intron | 40.0% | |
| CATGCTTCACCAAAATGTAG+TGG | - | chr8.4:29457117-29457136 | MS.gene012096:intron | 40.0% | |
| CGCCCAATATTCTTTGTCAT+AGG | - | chr8.4:29458257-29458276 | MS.gene012096:intron | 40.0% | |
| CTCATCTCAACAAACTCTCA+AGG | + | chr8.4:29456320-29456339 | None:intergenic | 40.0% | |
| CTTAAACCTTAAGCCAGTGA+GGG | - | chr8.4:29458285-29458304 | MS.gene012096:intron | 40.0% | |
| GAATGCACAACACAAACTAG+TGG | + | chr8.4:29458560-29458579 | None:intergenic | 40.0% | |
| GAGTACTATCTATCCGATGT+GGG | - | chr8.4:29458789-29458808 | MS.gene012096:intron | 40.0% | |
| GGATTGACATGTATAACCCT+AGG | - | chr8.4:29456930-29456949 | MS.gene012096:intron | 40.0% | |
| GGCATACTCTTATTCTTGTG+TGG | + | chr8.4:29458144-29458163 | None:intergenic | 40.0% | |
| GGGCAGAATATACAAACAGT+GGG | - | chr8.4:29458305-29458324 | MS.gene012096:intron | 40.0% | |
| GTAGTTCAGTACTTAGCACT+TGG | + | chr8.4:29457534-29457553 | None:intergenic | 40.0% | |
| TATCGAAGGATCTTGCATTG+AGG | + | chr8.4:29456628-29456647 | None:intergenic | 40.0% | |
| TCACCAAAGCTTCGATATTC+GGG | + | chr8.4:29456056-29456075 | None:intergenic | 40.0% | |
| TCCCCAAAACTAATTAACCG+TGG | + | chr8.4:29457372-29457391 | None:intergenic | 40.0% | |
| TGCTTCTTAGGAATCTCAGA+AGG | - | chr8.4:29456877-29456896 | MS.gene012096:intron | 40.0% | |
| TTTGTATATTCTGCCCTCAC+TGG | + | chr8.4:29458301-29458320 | None:intergenic | 40.0% | |
| ! | AAAAGACACTAGTCTAGCCA+TGG | + | chr8.4:29456903-29456922 | None:intergenic | 40.0% |
| ! | AAGATGGAATGGGCATGTTT+TGG | - | chr8.4:29456962-29456981 | MS.gene012096:intron | 40.0% |
| ! | AGAGTACTATCTATCCGATG+TGG | - | chr8.4:29458788-29458807 | MS.gene012096:intron | 40.0% |
| ! | AGATGGAATGGGCATGTTTT+GGG | - | chr8.4:29456963-29456982 | MS.gene012096:intron | 40.0% |
| ! | GACTAGTGTCTTTTATCACC+TGG | - | chr8.4:29456909-29456928 | MS.gene012096:intron | 40.0% |
| ! | GTTACATTCAACTGGTGTTG+TGG | - | chr8.4:29457189-29457208 | MS.gene012096:CDS | 40.0% |
| !! | CCGCAGTATTGATTGAGTAT+TGG | - | chr8.4:29458177-29458196 | MS.gene012096:intron | 40.0% |
| !! | CGGTTTTGTAAGGATGAGTT+AGG | + | chr8.4:29458725-29458744 | None:intergenic | 40.0% |
| !! | CTGATTTGGTGAGATGAACT+TGG | - | chr8.4:29457289-29457308 | MS.gene012096:CDS | 40.0% |
| !! | TGTACTGATTACCCACATCA+GGG | + | chr8.4:29457449-29457468 | None:intergenic | 40.0% |
| !! | TTCAGGTTGAGTATGATCCA+CGG | - | chr8.4:29457352-29457371 | MS.gene012096:intron | 40.0% |
| !!! | AAAAGGGTTGGCCGATTTTA+AGG | - | chr8.4:29459278-29459297 | MS.gene012096:intron | 40.0% |
| !!! | AAAGGGTTGGCCGATTTTAA+GGG | - | chr8.4:29459279-29459298 | MS.gene012096:intron | 40.0% |
| !!! | TGTTGCGTGAAGTTTTGTTG+TGG | + | chr8.4:29455764-29455783 | None:intergenic | 40.0% |
| AAAAGCGGAAACTGAGGAGT+GGG | + | chr8.4:29455739-29455758 | None:intergenic | 45.0% | |
| ACAAACAGTGGGTCAGTAGT+AGG | - | chr8.4:29458316-29458335 | MS.gene012096:intron | 45.0% | |
| CATAATCAGCGCGTTTCAAC+GGG | + | chr8.4:29456392-29456411 | None:intergenic | 45.0% | |
| CCAGGAGGTTAGACCAAATA+TGG | - | chr8.4:29456413-29456432 | MS.gene012096:intron | 45.0% | |
| CCATATTTGGTCTAACCTCC+TGG | + | chr8.4:29456416-29456435 | None:intergenic | 45.0% | |
| CTCTTATTCTTGTGTGGGCA+TGG | + | chr8.4:29458138-29458157 | None:intergenic | 45.0% | |
| CTGATGTGGGTAATCAGTAC+AGG | - | chr8.4:29457448-29457467 | MS.gene012096:CDS | 45.0% | |
| GAACACATAGGACTCGGATT+AGG | + | chr8.4:29457944-29457963 | None:intergenic | 45.0% | |
| GCTAGAGAACACATAGGACT+CGG | + | chr8.4:29457950-29457969 | None:intergenic | 45.0% | |
| GGGATTAGGTTTAGATCCAC+CGG | + | chr8.4:29456036-29456055 | None:intergenic | 45.0% | |
| GGTTCCCAATTAGCTGAAGA+AGG | + | chr8.4:29459141-29459160 | None:intergenic | 45.0% | |
| GTGGTTAAAAGCGGAAACTG+AGG | + | chr8.4:29455745-29455764 | None:intergenic | 45.0% | |
| TAAAAGCGGAAACTGAGGAG+TGG | + | chr8.4:29455740-29455759 | None:intergenic | 45.0% | |
| TAAACACCCGAACACAGCTT+CGG | + | chr8.4:29455982-29456001 | None:intergenic | 45.0% | |
| TATTCGCTCTCGGAAGTTTC+TGG | - | chr8.4:29455952-29455971 | MS.gene012096:intron | 45.0% | |
| TGCAAACTGTATCCGATTCC+CGG | - | chr8.4:29455872-29455891 | MS.gene012096:intron | 45.0% | |
| TGTGGGTAATCAGTACAGGT+AGG | - | chr8.4:29457452-29457471 | MS.gene012096:CDS | 45.0% | |
| TGTGTTGTGCATTCAAACGG+TGG | - | chr8.4:29458566-29458585 | MS.gene012096:intron | 45.0% | |
| TTAGGAATCTCAGAAGGCCA+TGG | - | chr8.4:29456883-29456902 | MS.gene012096:intron | 45.0% | |
| ! | CGGATTAGGGTGATTAGAAG+TGG | + | chr8.4:29457930-29457949 | None:intergenic | 45.0% |
| ! | CTTTGGTGATCACGCTGAAT+CGG | - | chr8.4:29456067-29456086 | MS.gene012096:intron | 45.0% |
| ! | GGTTTGCAAGCGTTGTTGAT+CGG | + | chr8.4:29455928-29455947 | None:intergenic | 45.0% |
| ! | GTTTGCAAGCGTTGTTGATC+GGG | + | chr8.4:29455927-29455946 | None:intergenic | 45.0% |
| ! | TGTCAGCTTCCAAGTCGTTT+TGG | + | chr8.4:29455669-29455688 | None:intergenic | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+AGG | - | chr8.4:29458732-29458751 | MS.gene012096:intron | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | + | chr8.4:29458735-29458754 | None:intergenic | 45.0% |
| !! | CTGTACTGATTACCCACATC+AGG | + | chr8.4:29457450-29457469 | None:intergenic | 45.0% |
| !! | GTTCTCTAGCTTGTTTGGTG+AGG | - | chr8.4:29457960-29457979 | MS.gene012096:intron | 45.0% |
| AATTGGGAACCTGCCTGAAG+AGG | - | chr8.4:29459150-29459169 | MS.gene012096:intron | 50.0% | |
| ACTGTATCCGATTCCCGGAT+CGG | - | chr8.4:29455877-29455896 | MS.gene012096:intron | 50.0% | |
| CATTGGTCCATGAAAAGGCC+AGG | - | chr8.4:29457055-29457074 | MS.gene012096:intron | 50.0% | |
| GAAAGTCAAACCTGGTGCTC+AGG | + | chr8.4:29457711-29457730 | None:intergenic | 50.0% | |
| GCAAAGAACAGGAGCAAACC+AGG | - | chr8.4:29457625-29457644 | MS.gene012096:intron | 50.0% | |
| GCAGACCTACACCTATAGTG+AGG | + | chr8.4:29458459-29458478 | None:intergenic | 50.0% | |
| GGCTTCTGTCAGCAAAGAAC+AGG | - | chr8.4:29457614-29457633 | MS.gene012096:intron | 50.0% | |
| GGGTAATCAGTACAGGTAGG+AGG | - | chr8.4:29457455-29457474 | MS.gene012096:CDS | 50.0% | |
| TCAACAACGCTTGCAAACCG+CGG | - | chr8.4:29455929-29455948 | MS.gene012096:intron | 50.0% | |
| TGGAGATCCGAAGCTGTGTT+CGG | - | chr8.4:29455972-29455991 | MS.gene012096:intron | 50.0% | |
| TTTGGTCAAGCCATGATCCC+AGG | - | chr8.4:29457406-29457425 | MS.gene012096:intron | 50.0% | |
| ! | CACAATGCTGCTTCTTGACC+TGG | + | chr8.4:29457646-29457665 | None:intergenic | 50.0% |
| ! | GGGTGGATTTAGTCCCACAT+CGG | + | chr8.4:29458805-29458824 | None:intergenic | 50.0% |
| ! | GTTGTTGATCGGGTTGTTCG+CGG | + | chr8.4:29455917-29455936 | None:intergenic | 50.0% |
| ! | TGATCACGCTGAATCGGTTC+AGG | - | chr8.4:29456073-29456092 | MS.gene012096:intron | 50.0% |
| ! | TTGTTGATCGGGTTGTTCGC+GGG | + | chr8.4:29455916-29455935 | None:intergenic | 50.0% |
| !! | ATTCTGCCCTCACTGGCTTA+AGG | + | chr8.4:29458294-29458313 | None:intergenic | 50.0% |
| !! | CAAAACCGGCTTGTAAGGTG+CGG | - | chr8.4:29458737-29458756 | MS.gene012096:intron | 50.0% |
| !! | CTATGTTGGCTTTGATGGGG+TGG | + | chr8.4:29458822-29458841 | None:intergenic | 50.0% |
| !! | GAAACGCGCTGATTATGTCC+AGG | - | chr8.4:29456395-29456414 | MS.gene012096:intron | 50.0% |
| !! | GGTGTTTACCTGGTGTTGTG+AGG | - | chr8.4:29455994-29456013 | MS.gene012096:intron | 50.0% |
| ACTTCCGAGAGCGAATACCG+CGG | + | chr8.4:29455949-29455968 | None:intergenic | 55.0% | |
| ATGGTTGGCGGTTCACGTCT+TGG | - | chr8.4:29456994-29457013 | MS.gene012096:intron | 55.0% | |
| CAAACACCTGCCTGGGATCA+TGG | + | chr8.4:29457419-29457438 | None:intergenic | 55.0% | |
| CAAACCGCGGTATTCGCTCT+CGG | - | chr8.4:29455942-29455961 | MS.gene012096:intron | 55.0% | |
| CATGATCCCAGGCAGGTGTT+TGG | - | chr8.4:29457417-29457436 | MS.gene012096:intron | 55.0% | |
| CTGTATCCGATTCCCGGATC+GGG | - | chr8.4:29455878-29455897 | MS.gene012096:intron | 55.0% | |
| GATCTCTCGAGCTCCTCTTC+AGG | + | chr8.4:29459166-29459185 | None:intergenic | 55.0% | |
| GATTACCCACATCAGGGCCT+TGG | + | chr8.4:29457443-29457462 | None:intergenic | 55.0% | |
| GCTGTGTTCGGGTGTTTACC+TGG | - | chr8.4:29455984-29456003 | MS.gene012096:intron | 55.0% | |
| GGAGATCCGAAGCTGTGTTC+GGG | - | chr8.4:29455973-29455992 | MS.gene012096:intron | 55.0% | |
| GGAGCTCGAGAGATCAAACC+TGG | - | chr8.4:29459171-29459190 | MS.gene012096:intron | 55.0% | |
| TTGGCGGTTCACGTCTTGGA+TGG | - | chr8.4:29456998-29457017 | MS.gene012096:intron | 55.0% | |
| TTTGGCCAAGGCCCTGATGT+GGG | - | chr8.4:29457435-29457454 | MS.gene012096:CDS | 55.0% | |
| ! | GCGCGTTTCAACGGGCTTAT+AGG | + | chr8.4:29456384-29456403 | None:intergenic | 55.0% |
| !! | ACCTGGTGTTGTGAGGACCA+CGG | - | chr8.4:29456001-29456020 | MS.gene012096:intron | 55.0% |
| !! | ACGCGCTGATTATGTCCAGG+AGG | - | chr8.4:29456398-29456417 | MS.gene012096:intron | 55.0% |
| !! | AGGACCACGGTGGGTTATTC+CGG | - | chr8.4:29456014-29456033 | MS.gene012096:intron | 55.0% |
| ACCGTGGTCCTCACAACACC+AGG | + | chr8.4:29456005-29456024 | None:intergenic | 60.0% | |
| CCTTGGCCAAACACCTGCCT+GGG | + | chr8.4:29457426-29457445 | None:intergenic | 60.0% | |
| GCACTCCGCACCTTACAAGC+CGG | + | chr8.4:29458745-29458764 | None:intergenic | 60.0% | |
| GTCAAGCCATGATCCCAGGC+AGG | - | chr8.4:29457410-29457429 | MS.gene012096:intron | 60.0% | |
| GTTTGGCCAAGGCCCTGATG+TGG | - | chr8.4:29457434-29457453 | MS.gene012096:CDS | 60.0% | |
| TCCACCGGAATAACCCACCG+TGG | + | chr8.4:29456021-29456040 | None:intergenic | 60.0% | |
| TCTCGAGCTCCTCTTCAGGC+AGG | + | chr8.4:29459162-29459181 | None:intergenic | 60.0% | |
| ! | GGTGTTGTGAGGACCACGGT+GGG | - | chr8.4:29456005-29456024 | MS.gene012096:intron | 60.0% |
| ! | TTGATCGGGTTGTTCGCGGG+CGG | + | chr8.4:29455913-29455932 | None:intergenic | 60.0% |
| !! | ACCACGGTGGGTTATTCCGG+TGG | - | chr8.4:29456017-29456036 | MS.gene012096:intron | 60.0% |
| !! | TGGTGTTGTGAGGACCACGG+TGG | - | chr8.4:29456004-29456023 | MS.gene012096:intron | 60.0% |
| ACCTGGTGCTCAGGCTCTGC+CGG | + | chr8.4:29457702-29457721 | None:intergenic | 65.0% | |
| CCCAGGCAGGTGTTTGGCCA+AGG | - | chr8.4:29457423-29457442 | MS.gene012096:intron | 65.0% | |
| GAGCGACCCGATCCGGGAAT+CGG | + | chr8.4:29455887-29455906 | None:intergenic | 65.0% | |
| GCCTTGGCCAAACACCTGCC+TGG | + | chr8.4:29457427-29457446 | None:intergenic | 65.0% | |
| ! | TGATCGGGTTGTTCGCGGGC+GGG | + | chr8.4:29455912-29455931 | None:intergenic | 65.0% |
| CCTGGTGCTCAGGCTCTGCC+GGG | + | chr8.4:29457701-29457720 | None:intergenic | 70.0% | |
| ! | CGGGTTGAGCGACCCGATCC+GGG | + | chr8.4:29455893-29455912 | None:intergenic | 70.0% |
| ! | GCGGGTTGAGCGACCCGATC+CGG | + | chr8.4:29455894-29455913 | None:intergenic | 70.0% |
| CCCGGCAGAGCCTGAGCACC+AGG | - | chr8.4:29457698-29457717 | MS.gene012096:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 29455588 | 29459309 | 29455588 | ID=MS.gene012096 |
| chr8.4 | mRNA | 29455588 | 29459309 | 29455588 | ID=MS.gene012096.t1;Parent=MS.gene012096 |
| chr8.4 | exon | 29459289 | 29459309 | 29459289 | ID=MS.gene012096.t1.exon1;Parent=MS.gene012096.t1 |
| chr8.4 | CDS | 29459289 | 29459309 | 29459289 | ID=cds.MS.gene012096.t1;Parent=MS.gene012096.t1 |
| chr8.4 | exon | 29458803 | 29459087 | 29458803 | ID=MS.gene012096.t1.exon2;Parent=MS.gene012096.t1 |
| chr8.4 | CDS | 29458803 | 29459087 | 29458803 | ID=cds.MS.gene012096.t1;Parent=MS.gene012096.t1 |
| chr8.4 | exon | 29457428 | 29457540 | 29457428 | ID=MS.gene012096.t1.exon3;Parent=MS.gene012096.t1 |
| chr8.4 | CDS | 29457428 | 29457540 | 29457428 | ID=cds.MS.gene012096.t1;Parent=MS.gene012096.t1 |
| chr8.4 | exon | 29457178 | 29457322 | 29457178 | ID=MS.gene012096.t1.exon4;Parent=MS.gene012096.t1 |
| chr8.4 | CDS | 29457178 | 29457322 | 29457178 | ID=cds.MS.gene012096.t1;Parent=MS.gene012096.t1 |
| chr8.4 | exon | 29455588 | 29455785 | 29455588 | ID=MS.gene012096.t1.exon5;Parent=MS.gene012096.t1 |
| chr8.4 | CDS | 29455588 | 29455785 | 29455588 | ID=cds.MS.gene012096.t1;Parent=MS.gene012096.t1 |
| Gene Sequence |
| Protein sequence |
