Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012424.t1 | XP_003610174.2 | 95.9 | 414 | 14 | 2 | 1 | 414 | 1 | 411 | 5.40E-230 | 806.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012424.t1 | Q08448 | 25.8 | 244 | 131 | 8 | 77 | 310 | 6 | 209 | 1.1e-13 | 79.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012424.t1 | A0A396IIT9 | 95.9 | 414 | 14 | 2 | 1 | 414 | 1 | 411 | 3.9e-230 | 806.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene012424 | MS.gene23920 | PPI |
| MS.gene012424 | MS.gene69080 | PPI |
| MS.gene012424 | MS.gene40236 | PPI |
| MS.gene012424 | MS.gene014590 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012424.t1 | MTR_4g128800 | 95.687 | 371 | 13 | 2 | 44 | 414 | 1 | 368 | 0.0 | 738 |
| MS.gene012424.t1 | MTR_4g128800 | 92.623 | 366 | 22 | 3 | 44 | 407 | 1 | 363 | 0.0 | 699 |
| MS.gene012424.t1 | MTR_4g128800 | 95.636 | 275 | 9 | 2 | 44 | 318 | 1 | 272 | 0.0 | 545 |
| MS.gene012424.t1 | MTR_3g110530 | 53.525 | 383 | 159 | 7 | 41 | 412 | 23 | 397 | 8.73e-140 | 405 |
| MS.gene012424.t1 | MTR_1g040460 | 54.006 | 337 | 141 | 3 | 77 | 413 | 31 | 353 | 1.06e-120 | 355 |
| MS.gene012424.t1 | MTR_8g086260 | 45.531 | 358 | 168 | 6 | 75 | 412 | 88 | 438 | 3.40e-95 | 293 |
| MS.gene012424.t1 | MTR_8g086260 | 45.858 | 338 | 156 | 6 | 75 | 392 | 88 | 418 | 2.01e-88 | 275 |
| MS.gene012424.t1 | MTR_2g015960 | 44.675 | 338 | 169 | 5 | 75 | 399 | 82 | 414 | 1.20e-86 | 270 |
| MS.gene012424.t1 | MTR_8g086260 | 50.397 | 252 | 115 | 2 | 75 | 323 | 88 | 332 | 2.57e-82 | 256 |
| MS.gene012424.t1 | MTR_8g086260 | 49.242 | 264 | 124 | 2 | 75 | 335 | 88 | 344 | 3.61e-81 | 254 |
| MS.gene012424.t1 | MTR_2g015960 | 49.587 | 242 | 117 | 2 | 75 | 316 | 21 | 257 | 7.51e-76 | 237 |
| MS.gene012424.t1 | MTR_2g015960 | 50.206 | 243 | 114 | 3 | 75 | 316 | 82 | 318 | 6.75e-75 | 237 |
| MS.gene012424.t1 | MTR_8g086260 | 48.276 | 232 | 110 | 2 | 75 | 303 | 88 | 312 | 5.37e-70 | 224 |
| MS.gene012424.t1 | MTR_8g086260 | 48.276 | 232 | 110 | 2 | 75 | 303 | 88 | 312 | 8.34e-70 | 223 |
| MS.gene012424.t1 | MTR_6g005650 | 54.023 | 87 | 37 | 2 | 145 | 231 | 211 | 294 | 5.08e-22 | 95.9 |
| MS.gene012424.t1 | MTR_7g405800 | 51.724 | 87 | 39 | 2 | 145 | 231 | 144 | 227 | 6.22e-21 | 91.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012424.t1 | AT4G25770 | 67.847 | 339 | 95 | 3 | 75 | 412 | 91 | 416 | 1.76e-163 | 466 |
| MS.gene012424.t1 | AT4G25770 | 64.095 | 337 | 107 | 3 | 75 | 410 | 91 | 414 | 1.94e-149 | 430 |
| MS.gene012424.t1 | AT1G10040 | 56.305 | 341 | 137 | 4 | 75 | 412 | 79 | 410 | 2.76e-129 | 379 |
| MS.gene012424.t1 | AT5G51180 | 54.286 | 350 | 136 | 6 | 64 | 412 | 29 | 355 | 5.20e-120 | 353 |
| MS.gene012424.t1 | AT5G51180 | 54.286 | 350 | 136 | 6 | 64 | 412 | 29 | 355 | 5.20e-120 | 353 |
| MS.gene012424.t1 | AT1G10040 | 55.452 | 321 | 131 | 4 | 75 | 392 | 79 | 390 | 3.15e-118 | 350 |
| MS.gene012424.t1 | AT1G29120 | 43.526 | 363 | 174 | 6 | 66 | 411 | 94 | 442 | 1.21e-90 | 281 |
| MS.gene012424.t1 | AT1G29120 | 43.526 | 363 | 174 | 6 | 66 | 411 | 93 | 441 | 1.37e-90 | 281 |
| MS.gene012424.t1 | AT1G29120 | 43.526 | 363 | 174 | 6 | 66 | 411 | 93 | 441 | 1.37e-90 | 281 |
| MS.gene012424.t1 | AT1G29120 | 43.132 | 364 | 175 | 7 | 66 | 411 | 93 | 442 | 1.54e-87 | 273 |
| MS.gene012424.t1 | AT1G29120 | 43.714 | 350 | 166 | 6 | 66 | 398 | 93 | 428 | 2.80e-86 | 269 |
| MS.gene012424.t1 | AT1G29120 | 48.148 | 270 | 126 | 5 | 66 | 335 | 93 | 348 | 1.26e-78 | 248 |
| MS.gene012424.t1 | AT1G29120 | 48.148 | 270 | 126 | 5 | 66 | 335 | 93 | 348 | 1.35e-78 | 248 |
| MS.gene012424.t1 | AT1G29120 | 46.639 | 238 | 114 | 4 | 66 | 303 | 93 | 317 | 2.21e-67 | 217 |
Find 91 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAGGAATGAATTCGTTTC+TGG | 0.111088 | 8.3:-2692524 | None:intergenic |
| CCATCATCATCATTATTATT+TGG | 0.144612 | 8.3:-2692442 | MS.gene012424:CDS |
| TGGCTCTAAACCAGCGATTC+TGG | 0.256377 | 8.3:+2690956 | None:intergenic |
| CACCTTGTCATCATGGTTAA+TGG | 0.263443 | 8.3:-2692289 | MS.gene012424:CDS |
| TCTTCAAAATTGACATTTGA+TGG | 0.269567 | 8.3:-2691367 | MS.gene012424:CDS |
| GCACTATTATCATCTACTTT+GGG | 0.275400 | 8.3:+2692337 | None:intergenic |
| CGGTGGACGATGACTTTATC+TGG | 0.282358 | 8.3:+2692106 | None:intergenic |
| AATGAATTCGTTTCTGGTTT+GGG | 0.288219 | 8.3:-2692518 | MS.gene012424:CDS |
| ATTTGATGGTGTTGATACTA+TGG | 0.293233 | 8.3:-2691353 | MS.gene012424:CDS |
| AACTTCGGCTTCTAATGTTT+TGG | 0.303374 | 8.3:+2691049 | None:intergenic |
| AAATTTCATCGTCGACGATT+TGG | 0.305836 | 8.3:-2692385 | MS.gene012424:CDS |
| GAATGAATTCGTTTCTGGTT+TGG | 0.313753 | 8.3:-2692519 | MS.gene012424:CDS |
| AACGTTAATATATGCTTTGT+TGG | 0.329433 | 8.3:+2688989 | None:intergenic |
| GGCACATTCTTTGGGAGGCT+TGG | 0.330760 | 8.3:-2691108 | MS.gene012424:CDS |
| CAAACTGCACATTTAATTGT+AGG | 0.343395 | 8.3:-2689810 | MS.gene012424:CDS |
| AGCACTATTATCATCTACTT+TGG | 0.350456 | 8.3:+2692336 | None:intergenic |
| TTTGAGATGCTCTTCTTTCA+AGG | 0.353953 | 8.3:+2689829 | None:intergenic |
| TTGTAGCTTCCATTTCTTTG+TGG | 0.358068 | 8.3:-2689861 | MS.gene012424:intron |
| GGGGTCTCACTCAGGTTCAT+TGG | 0.376799 | 8.3:-2687756 | MS.gene012424:CDS |
| AGTTCTGCTGATTGGAGATA+TGG | 0.382588 | 8.3:-2692154 | MS.gene012424:CDS |
| TCTATTGTCAGACGCTGGCC+TGG | 0.397053 | 8.3:-2691152 | MS.gene012424:CDS |
| CATTTAATTGTAGGGAGAAC+TGG | 0.400593 | 8.3:-2689801 | MS.gene012424:CDS |
| ACCTTTGCCACGCCGCATCT+TGG | 0.416476 | 8.3:-2690921 | MS.gene012424:CDS |
| TCCTCCTCACCTTGTCATCA+TGG | 0.426931 | 8.3:-2692296 | MS.gene012424:CDS |
| ACATTCTTTGGGAGGCTTGG+TGG | 0.430561 | 8.3:-2691105 | MS.gene012424:CDS |
| AAAGGAATGCCACAAAGAAA+TGG | 0.436032 | 8.3:+2689852 | None:intergenic |
| GCAAAGGTTATAAAGTTCAT+TGG | 0.449119 | 8.3:+2690936 | None:intergenic |
| CTATTGTCAGACGCTGGCCT+GGG | 0.450168 | 8.3:-2691151 | MS.gene012424:CDS |
| GATGACAAGGTGAGGAGGAA+TGG | 0.454449 | 8.3:+2692300 | None:intergenic |
| TGGTTAATGGCATTGTTGGC+AGG | 0.459526 | 8.3:-2692276 | MS.gene012424:intron |
| GGGTCTCACTCAGGTTCATT+GGG | 0.459640 | 8.3:-2687755 | MS.gene012424:CDS |
| TTCCTCACGGACAACGATGA+TGG | 0.467217 | 8.3:-2689768 | MS.gene012424:CDS |
| CATCAGAATCCTCAATCATT+CGG | 0.469799 | 8.3:+2689727 | None:intergenic |
| ATGACAAGGTGAGGAGGAAT+GGG | 0.470142 | 8.3:+2692301 | None:intergenic |
| CCAAATAATAATGATGATGA+TGG | 0.479222 | 8.3:+2692442 | None:intergenic |
| TCTTCTCCTCCGAATGATTG+AGG | 0.484935 | 8.3:-2689736 | MS.gene012424:CDS |
| GATGCTCTTCTTTCAAGGAA+AGG | 0.488436 | 8.3:+2689834 | None:intergenic |
| TTTCATCGTCGACGATTTGG+TGG | 0.490107 | 8.3:-2692382 | MS.gene012424:CDS |
| CATTATGAAGCCAGAATCGC+TGG | 0.492987 | 8.3:-2690966 | MS.gene012424:CDS |
| GAAAACCTACTGGTTGCATT+CGG | 0.496407 | 8.3:-2687477 | MS.gene012424:CDS |
| TTTGCAGTCACAATTTCTGC+AGG | 0.496865 | 8.3:+2691025 | None:intergenic |
| AAAGAGATCTTCTGCAACCC+AGG | 0.497559 | 8.3:+2691134 | None:intergenic |
| ATCATGGTTAATGGCATTGT+TGG | 0.501862 | 8.3:-2692280 | MS.gene012424:CDS |
| GATGGAGCACCTCATCAATT+CGG | 0.503206 | 8.3:-2689188 | MS.gene012424:CDS |
| AAACTGCACATTTAATTGTA+GGG | 0.504974 | 8.3:-2689809 | MS.gene012424:CDS |
| ACAATTTCTGCAGGTAACTT+CGG | 0.511380 | 8.3:+2691034 | None:intergenic |
| CACTATTATCATCTACTTTG+GGG | 0.522847 | 8.3:+2692338 | None:intergenic |
| ACTTGTGTTGAAGATATGGT+TGG | 0.526168 | 8.3:-2689210 | MS.gene012424:intron |
| AATCTCAGGTGAAAACCTAC+TGG | 0.526558 | 8.3:-2687487 | MS.gene012424:intron |
| ACCAAGATGCGGCGTGGCAA+AGG | 0.535141 | 8.3:+2690920 | None:intergenic |
| CACATTGTACACACTGAAGG+TGG | 0.538544 | 8.3:-2689029 | MS.gene012424:CDS |
| ACCTACTGGTTGCATTCGGA+TGG | 0.540251 | 8.3:-2687473 | MS.gene012424:CDS |
| GATGATAAGGGGTCTCACTC+AGG | 0.541264 | 8.3:-2687764 | MS.gene012424:CDS |
| TTTGTGGCACATTCTTTGGG+AGG | 0.547005 | 8.3:-2691113 | MS.gene012424:CDS |
| AAAGCATATATTAACGTTGG+AGG | 0.550261 | 8.3:-2688984 | MS.gene012424:CDS |
| AACAAAGCATATATTAACGT+TGG | 0.554028 | 8.3:-2688987 | MS.gene012424:CDS |
| TACTGCTCACAGTACAATCC+AGG | 0.559859 | 8.3:-2687692 | MS.gene012424:intron |
| GGGTGAGAGGCTAGCTGAAG+AGG | 0.564032 | 8.3:-2691332 | MS.gene012424:intron |
| TCAGGTTCATTGGGAGCGTG+TGG | 0.573997 | 8.3:-2687746 | MS.gene012424:CDS |
| GGCCAGAAAATTGACATGGA+AGG | 0.577554 | 8.3:-2688963 | MS.gene012424:intron |
| TGGTTCAAGAGGACATAGAC+AGG | 0.585186 | 8.3:-2690901 | MS.gene012424:intron |
| ACGCCGCATCTTGGTTCAAG+AGG | 0.588632 | 8.3:-2690912 | MS.gene012424:CDS |
| TCAATCATTCGGAGGAGAAG+AGG | 0.590800 | 8.3:+2689738 | None:intergenic |
| CAGAAATTGTGACTGCAAAG+AGG | 0.591218 | 8.3:-2691021 | MS.gene012424:CDS |
| TTTGTAGAGGAGATGATAAG+GGG | 0.598296 | 8.3:-2687775 | MS.gene012424:intron |
| TTCCATCATCGTTGTCCGTG+AGG | 0.608229 | 8.3:+2689766 | None:intergenic |
| GGAAGTTATCTATCATGTGA+AGG | 0.612715 | 8.3:+2687438 | None:intergenic |
| GTGCGGAGCAGTTTCTCAAG+AGG | 0.613223 | 8.3:-2692132 | MS.gene012424:CDS |
| TTTGATGGTGTTGATACTAT+GGG | 0.613394 | 8.3:-2691352 | MS.gene012424:CDS |
| TACTATCTATTGTCAGACGC+TGG | 0.614523 | 8.3:-2691157 | MS.gene012424:CDS |
| ACATTGCCGGAGACTAGATA+AGG | 0.614588 | 8.3:+2687417 | None:intergenic |
| GCGTCAACATGAACTTCCAA+AGG | 0.625059 | 8.3:-2689166 | MS.gene012424:intron |
| CCTTCAGTGTGTACAATGTG+TGG | 0.626797 | 8.3:+2689032 | None:intergenic |
| ACCATGATGACAAGGTGAGG+AGG | 0.632986 | 8.3:+2692295 | None:intergenic |
| GTGTTGAAGATATGGTTGGA+TGG | 0.633558 | 8.3:-2689206 | MS.gene012424:intron |
| CCACACATTGTACACACTGA+AGG | 0.635968 | 8.3:-2689032 | MS.gene012424:CDS |
| ATCATTCGGAGGAGAAGAGG+AGG | 0.636999 | 8.3:+2689741 | None:intergenic |
| ACATTGTACACACTGAAGGT+GGG | 0.643420 | 8.3:-2689028 | MS.gene012424:CDS |
| ATGTTGACGCCGAATTGATG+AGG | 0.645392 | 8.3:+2689179 | None:intergenic |
| TGCCATTAACCATGATGACA+AGG | 0.651118 | 8.3:+2692287 | None:intergenic |
| ATAATGATGATGATGGCGTA+AGG | 0.658967 | 8.3:+2692449 | None:intergenic |
| TGGAGGCCAGAAAATTGACA+TGG | 0.659078 | 8.3:-2688967 | MS.gene012424:CDS |
| CAGAATCCTCAATCATTCGG+AGG | 0.663768 | 8.3:+2689730 | None:intergenic |
| TGTCCTCTTGAACCAAGATG+CGG | 0.666886 | 8.3:+2690909 | None:intergenic |
| CTTCAGTGTGTACAATGTGT+GGG | 0.669488 | 8.3:+2689033 | None:intergenic |
| TTAACCATGATGACAAGGTG+AGG | 0.670354 | 8.3:+2692292 | None:intergenic |
| TGCTGATTGGAGATATGGTG+CGG | 0.674450 | 8.3:-2692149 | MS.gene012424:CDS |
| TCTTGAACCAAGATGCGGCG+TGG | 0.680746 | 8.3:+2690914 | None:intergenic |
| ACCATCCGAATGCAACCAGT+AGG | 0.686623 | 8.3:+2687472 | None:intergenic |
| GTGTTGATACTATGGGTGAG+AGG | 0.693331 | 8.3:-2691345 | MS.gene012424:CDS |
| GCTTTCAGAAGAGTAAACAG+CGG | 0.740467 | 8.3:-2687717 | MS.gene012424:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATAATCAAAATATACAT+AGG | + | chr8.3:2689986-2690005 | None:intergenic | 10.0% |
| !! | TTTAAATTTATAGTAAGTAA+TGG | - | chr8.3:2691588-2691607 | MS.gene012424:intron | 10.0% |
| !!! | AATTTCTAAAATAAATCTTT+GGG | + | chr8.3:2689774-2689793 | None:intergenic | 10.0% |
| !!! | TCTTTTTTTTTTTTTAAACT+CGG | + | chr8.3:2691942-2691961 | None:intergenic | 10.0% |
| !!! | TTCTTTTATTTTATTATATC+TGG | - | chr8.3:2691816-2691835 | MS.gene012424:intron | 10.0% |
| !! | AAAAAAAAGATTTAACAACT+TGG | - | chr8.3:2691952-2691971 | MS.gene012424:intron | 15.0% |
| !! | CATTAACAATTTAATTGAAT+TGG | + | chr8.3:2690315-2690334 | None:intergenic | 15.0% |
| !! | CTATAAATTTAAATAACAGT+AGG | + | chr8.3:2691581-2691600 | None:intergenic | 15.0% |
| !! | GAAAAAAATATATGAAGTAT+AGG | - | chr8.3:2691225-2691244 | MS.gene012424:intron | 15.0% |
| !! | TTTAGAAACATATTATATGA+AGG | + | chr8.3:2691304-2691323 | None:intergenic | 15.0% |
| !!! | ATTTGAAATTATACAAACAA+CGG | - | chr8.3:2689865-2689884 | MS.gene012424:intron | 15.0% |
| !!! | CAATTTCTAAAATAAATCTT+TGG | + | chr8.3:2689775-2689794 | None:intergenic | 15.0% |
| !!! | CACTTTTTCATTTTATTAAA+GGG | - | chr8.3:2689826-2689845 | MS.gene012424:CDS | 15.0% |
| !!! | GTAATTTAAATTGCAATTTT+GGG | - | chr8.3:2691738-2691757 | MS.gene012424:intron | 15.0% |
| !!! | GTAATTTTAATGATATATTG+TGG | - | chr8.3:2688539-2688558 | MS.gene012424:intron | 15.0% |
| !!! | TCACTTTTTCATTTTATTAA+AGG | - | chr8.3:2689825-2689844 | MS.gene012424:CDS | 15.0% |
| !!! | TGTAATTTAAATTGCAATTT+TGG | - | chr8.3:2691737-2691756 | MS.gene012424:intron | 15.0% |
| !!! | TTCTTTTATAATAATTCACA+AGG | + | chr8.3:2688508-2688527 | None:intergenic | 15.0% |
| !!! | TTTGTTTACTTTTAATTATC+TGG | + | chr8.3:2692005-2692024 | None:intergenic | 15.0% |
| !! | AACAGACAAATAAAATATCA+CGG | + | chr8.3:2692437-2692456 | None:intergenic | 20.0% |
| !! | AACTTAATTCATGTTTATCT+AGG | - | chr8.3:2688767-2688786 | MS.gene012424:intron | 20.0% |
| !! | AAGTGTAAACAATATTATTG+TGG | - | chr8.3:2688354-2688373 | MS.gene012424:intron | 20.0% |
| !! | AATGTGAATGAATTATCATA+AGG | + | chr8.3:2688731-2688750 | None:intergenic | 20.0% |
| !! | AGGTTAATTATTTCAAAGTT+AGG | + | chr8.3:2691673-2691692 | None:intergenic | 20.0% |
| !! | ATAACTATTATCAGTTAATC+CGG | - | chr8.3:2688124-2688143 | MS.gene012424:intron | 20.0% |
| !! | ATATTGAAATTGTCTTAACT+GGG | - | chr8.3:2690555-2690574 | MS.gene012424:intron | 20.0% |
| !! | CTATATGTTAAAATTTGGTA+GGG | + | chr8.3:2691886-2691905 | None:intergenic | 20.0% |
| !! | GTTGTTTGTATAATTTCAAA+TGG | + | chr8.3:2689866-2689885 | None:intergenic | 20.0% |
| !! | TACATCATTGTAACAATATA+TGG | + | chr8.3:2690668-2690687 | None:intergenic | 20.0% |
| !! | TATAACAAACTTAAATGACT+CGG | + | chr8.3:2690269-2690288 | None:intergenic | 20.0% |
| !! | TATAAGATAAAAACTTTACC+TGG | + | chr8.3:2692276-2692295 | None:intergenic | 20.0% |
| !! | TATTGTATATGTAATTCACA+CGG | - | chr8.3:2687894-2687913 | MS.gene012424:intron | 20.0% |
| !! | TTCGATAATTATTAATCTAC+TGG | - | chr8.3:2692031-2692050 | MS.gene012424:intron | 20.0% |
| !!! | AATTTTGCATATATGGATTT+AGG | - | chr8.3:2688101-2688120 | MS.gene012424:intron | 20.0% |
| !!! | ACATGAATTAAGTTTAAAAC+TGG | + | chr8.3:2688761-2688780 | None:intergenic | 20.0% |
| !!! | ATGAATTAAGTTTAAAACTG+GGG | + | chr8.3:2688759-2688778 | None:intergenic | 20.0% |
| !!! | ATTGTGGATTTTCATATAAA+TGG | - | chr8.3:2688370-2688389 | MS.gene012424:intron | 20.0% |
| !!! | CATGAATTAAGTTTAAAACT+GGG | + | chr8.3:2688760-2688779 | None:intergenic | 20.0% |
| !!! | CTCAATCTTAATGTTTTATA+TGG | - | chr8.3:2690823-2690842 | MS.gene012424:intron | 20.0% |
| !!! | TAAAACATTTTACTTCAAGT+TGG | + | chr8.3:2689249-2689268 | None:intergenic | 20.0% |
| ! | AAACTGCACATTTAATTGTA+GGG | - | chr8.3:2690138-2690157 | MS.gene012424:intron | 25.0% |
| ! | AACAAAGCATATATTAACGT+TGG | - | chr8.3:2690960-2690979 | MS.gene012424:CDS | 25.0% |
| ! | AACGTTAATATATGCTTTGT+TGG | + | chr8.3:2690961-2690980 | None:intergenic | 25.0% |
| ! | AAGACATCTAATTTGAAAAG+AGG | + | chr8.3:2690407-2690426 | None:intergenic | 25.0% |
| ! | AATTACTAATCTTCAGTTGA+TGG | + | chr8.3:2689564-2689583 | None:intergenic | 25.0% |
| ! | ACTAATAACACAAATCTCTA+AGG | + | chr8.3:2689365-2689384 | None:intergenic | 25.0% |
| ! | AGAGAAAACCATAAATCATA+GGG | - | chr8.3:2689391-2689410 | MS.gene012424:intron | 25.0% |
| ! | AGTGGCTATATGTTAAAATT+TGG | + | chr8.3:2691891-2691910 | None:intergenic | 25.0% |
| ! | ATATTATATGAAGGTCCAAA+CGG | + | chr8.3:2691295-2691314 | None:intergenic | 25.0% |
| ! | CAAAATCATCTGTCAAATTA+TGG | + | chr8.3:2688298-2688317 | None:intergenic | 25.0% |
| ! | CCATCATCATCATTATTATT+TGG | - | chr8.3:2687505-2687524 | MS.gene012424:intron | 25.0% |
| ! | CTTTGTATGTATCTAATTGT+TGG | - | chr8.3:2688198-2688217 | MS.gene012424:intron | 25.0% |
| ! | GATATTGAAATTGTCTTAAC+TGG | - | chr8.3:2690554-2690573 | MS.gene012424:intron | 25.0% |
| ! | GCTATATGTTAAAATTTGGT+AGG | + | chr8.3:2691887-2691906 | None:intergenic | 25.0% |
| ! | GTCAAATTATGGTATAACAA+GGG | + | chr8.3:2688287-2688306 | None:intergenic | 25.0% |
| ! | TAAATTGTTAATGATTGTGC+AGG | - | chr8.3:2690322-2690341 | MS.gene012424:intron | 25.0% |
| ! | TATTGAAATTGTCTTAACTG+GGG | - | chr8.3:2690556-2690575 | MS.gene012424:intron | 25.0% |
| ! | TCTTCAAAATTGACATTTGA+TGG | - | chr8.3:2688580-2688599 | MS.gene012424:intron | 25.0% |
| ! | TGTCAAATTATGGTATAACA+AGG | + | chr8.3:2688288-2688307 | None:intergenic | 25.0% |
| ! | TTTAATGATATATTGTGGAC+AGG | - | chr8.3:2688544-2688563 | MS.gene012424:intron | 25.0% |
| !! | AGATTTGTGTTATTAGTATG+AGG | - | chr8.3:2689368-2689387 | MS.gene012424:intron | 25.0% |
| !! | AGTAATTCATCATGTTTTGT+GGG | + | chr8.3:2688022-2688041 | None:intergenic | 25.0% |
| !! | ATTTATGCTCCTTAATTTTC+CGG | - | chr8.3:2690060-2690079 | MS.gene012424:intron | 25.0% |
| !! | CCAAAGTAATTTAAAGTTCA+GGG | + | chr8.3:2688684-2688703 | None:intergenic | 25.0% |
| !! | CCAAATAATAATGATGATGA+TGG | + | chr8.3:2687508-2687527 | None:intergenic | 25.0% |
| !! | GAGCTAAAATTTTGCATATA+TGG | - | chr8.3:2688094-2688113 | MS.gene012424:intron | 25.0% |
| !! | GTTTTTATCTTATAGCTTTC+CGG | - | chr8.3:2692282-2692301 | MS.gene012424:CDS | 25.0% |
| !! | TATCTACAGAGATTTTCTTA+CGG | + | chr8.3:2687864-2687883 | None:intergenic | 25.0% |
| !! | TCCAAAGTAATTTAAAGTTC+AGG | + | chr8.3:2688685-2688704 | None:intergenic | 25.0% |
| !! | TGATAATGATATAGTGTCAA+TGG | - | chr8.3:2690466-2690485 | MS.gene012424:intron | 25.0% |
| !! | TTGAAAATAGCTTCTCATTT+TGG | - | chr8.3:2688400-2688419 | MS.gene012424:intron | 25.0% |
| !!! | AATTTTAACATATAGCCACT+TGG | - | chr8.3:2691891-2691910 | MS.gene012424:intron | 25.0% |
| !!! | AGACAGTTTTTATTTCTTAC+AGG | + | chr8.3:2691023-2691042 | None:intergenic | 25.0% |
| !!! | ATATTAAGTGGTTTTTGAGA+AGG | + | chr8.3:2689517-2689536 | None:intergenic | 25.0% |
| !!! | CTAGGAAAATTTGTTTTTCT+TGG | - | chr8.3:2691532-2691551 | MS.gene012424:intron | 25.0% |
| !!! | TATTTAATTTGTAGCAGCTT+GGG | - | chr8.3:2690000-2690019 | MS.gene012424:intron | 25.0% |
| !!! | TGTATGATTTTAGTTTCTGA+TGG | - | chr8.3:2691631-2691650 | MS.gene012424:intron | 25.0% |
| !!! | TTATTTAATTTGTAGCAGCT+TGG | - | chr8.3:2689999-2690018 | MS.gene012424:intron | 25.0% |
| AAAAAACTCGTGAATTGACT+TGG | - | chr8.3:2688227-2688246 | MS.gene012424:intron | 30.0% | |
| AAAGCATATATTAACGTTGG+AGG | - | chr8.3:2690963-2690982 | MS.gene012424:CDS | 30.0% | |
| AAGAAAATAATTAGCTCGTG+TGG | + | chr8.3:2690641-2690660 | None:intergenic | 30.0% | |
| AAGACTAGAAATTGTATGCT+AGG | + | chr8.3:2692090-2692109 | None:intergenic | 30.0% | |
| AATAACAGTAGGAGATCATT+CGG | + | chr8.3:2691570-2691589 | None:intergenic | 30.0% | |
| AGACTAGAAATTGTATGCTA+GGG | + | chr8.3:2692089-2692108 | None:intergenic | 30.0% | |
| AGCAAAGTAAAAAAGAGGAA+AGG | + | chr8.3:2691258-2691277 | None:intergenic | 30.0% | |
| AGCACTATTATCATCTACTT+TGG | + | chr8.3:2687614-2687633 | None:intergenic | 30.0% | |
| AGCTATAAACTTCCAAAGAA+AGG | + | chr8.3:2691703-2691722 | None:intergenic | 30.0% | |
| AGCTTAAAATTGCATACAAG+AGG | - | chr8.3:2689285-2689304 | MS.gene012424:intron | 30.0% | |
| ATGAAATTTCCATTGAACCT+TGG | - | chr8.3:2691477-2691496 | MS.gene012424:intron | 30.0% | |
| ATGGATCATGTCATATTAAG+TGG | + | chr8.3:2689529-2689548 | None:intergenic | 30.0% | |
| ATTAGACTAGCAGAAAAGAA+AGG | + | chr8.3:2690871-2690890 | None:intergenic | 30.0% | |
| ATTTGTCTGTTGTTAATCTC+AGG | - | chr8.3:2692446-2692465 | MS.gene012424:CDS | 30.0% | |
| CAAACTGCACATTTAATTGT+AGG | - | chr8.3:2690137-2690156 | MS.gene012424:intron | 30.0% | |
| CAAATACCAGAGACAAAAAA+AGG | + | chr8.3:2691061-2691080 | None:intergenic | 30.0% | |
| CAAATATAAGTGACAGTAAC+AGG | - | chr8.3:2688436-2688455 | MS.gene012424:intron | 30.0% | |
| CAAATTGTACTGAAGCTTAA+TGG | - | chr8.3:2690442-2690461 | MS.gene012424:intron | 30.0% | |
| CAAGAAGTTTACTTAAGATG+AGG | - | chr8.3:2691096-2691115 | MS.gene012424:CDS | 30.0% | |
| CAATATGATTATGAGAGTGA+AGG | + | chr8.3:2687709-2687728 | None:intergenic | 30.0% | |
| CACTATTATCATCTACTTTG+GGG | + | chr8.3:2687612-2687631 | None:intergenic | 30.0% | |
| CCCTGAACTTTAAATTACTT+TGG | - | chr8.3:2688681-2688700 | MS.gene012424:intron | 30.0% | |
| CTGAAAATTCCAAATGCATT+TGG | + | chr8.3:2687775-2687794 | None:intergenic | 30.0% | |
| GAGAGAAAACCATAAATCAT+AGG | - | chr8.3:2689390-2689409 | MS.gene012424:intron | 30.0% | |
| GATATCTGGCAAAATTCATT+TGG | + | chr8.3:2689665-2689684 | None:intergenic | 30.0% | |
| GCAAAGGTTATAAAGTTCAT+TGG | + | chr8.3:2689014-2689033 | None:intergenic | 30.0% | |
| GCACTATTATCATCTACTTT+GGG | + | chr8.3:2687613-2687632 | None:intergenic | 30.0% | |
| GTATAGTATGTTCTTCTTGT+AGG | - | chr8.3:2691507-2691526 | MS.gene012424:intron | 30.0% | |
| GTATCAAAGTTTAATTGCGA+AGG | + | chr8.3:2689456-2689475 | None:intergenic | 30.0% | |
| TCTTCATGTTTATAACCGTT+TGG | - | chr8.3:2691277-2691296 | MS.gene012424:intron | 30.0% | |
| TGAAATTTCCATTGAACCTT+GGG | - | chr8.3:2691478-2691497 | MS.gene012424:intron | 30.0% | |
| TGAAGAGCAAAGTAAAAAAG+AGG | + | chr8.3:2691263-2691282 | None:intergenic | 30.0% | |
| TGGTATTTGTGAAAGAAGTA+TGG | - | chr8.3:2691072-2691091 | MS.gene012424:CDS | 30.0% | |
| TTATTGATGCTCAAGTATGA+AGG | - | chr8.3:2688152-2688171 | MS.gene012424:intron | 30.0% | |
| TTTATCTTGCTGAATGTTCT+TGG | + | chr8.3:2691201-2691220 | None:intergenic | 30.0% | |
| TTTGGAAGTTTATAGCTTAC+TGG | - | chr8.3:2691706-2691725 | MS.gene012424:intron | 30.0% | |
| TTTGGCAACGAAAACAATTT+AGG | + | chr8.3:2689647-2689666 | None:intergenic | 30.0% | |
| ! | ACAAATCTCTAAGGAAACAA+GGG | + | chr8.3:2689356-2689375 | None:intergenic | 30.0% |
| ! | AGATTTTACAAATCAGTCCA+TGG | + | chr8.3:2691789-2691808 | None:intergenic | 30.0% |
| ! | ATAGTATCAACAAGTTTTGC+CGG | + | chr8.3:2692304-2692323 | None:intergenic | 30.0% |
| ! | ATTTTGCCAGATATCTTCAT+AGG | - | chr8.3:2689670-2689689 | MS.gene012424:intron | 30.0% |
| ! | CAGTAATTCATCATGTTTTG+TGG | + | chr8.3:2688023-2688042 | None:intergenic | 30.0% |
| ! | TAAGGAGCATAAATAAGAGA+CGG | + | chr8.3:2690054-2690073 | None:intergenic | 30.0% |
| ! | TAGTTGCAATTTGATCCTTT+TGG | - | chr8.3:2688646-2688665 | MS.gene012424:intron | 30.0% |
| ! | TTTGGAGTAATCAAAAAGTC+TGG | + | chr8.3:2688883-2688902 | None:intergenic | 30.0% |
| ! | TTTGTTGTACGAGCTAAAAA+TGG | - | chr8.3:2689900-2689919 | MS.gene012424:intron | 30.0% |
| ! | TTTTGTAGAGGAGATGATAA+GGG | - | chr8.3:2692171-2692190 | MS.gene012424:intron | 30.0% |
| ! | TTTTTGTAGAGGAGATGATA+AGG | - | chr8.3:2692170-2692189 | MS.gene012424:intron | 30.0% |
| !! | AAGACATATGCTTTTTGTAG+AGG | - | chr8.3:2692159-2692178 | MS.gene012424:intron | 30.0% |
| !! | ATTTAATTTGTAGCAGCTTG+GGG | - | chr8.3:2690001-2690020 | MS.gene012424:intron | 30.0% |
| !! | ATTTGATGGTGTTGATACTA+TGG | - | chr8.3:2688594-2688613 | MS.gene012424:intron | 30.0% |
| !! | TTTGATGGTGTTGATACTAT+GGG | - | chr8.3:2688595-2688614 | MS.gene012424:intron | 30.0% |
| !!! | AAATTGCAATTTTGGGTTTC+TGG | - | chr8.3:2691745-2691764 | MS.gene012424:intron | 30.0% |
| !!! | TCAGGTTTTATTTTGCTTTC+AGG | - | chr8.3:2691130-2691149 | MS.gene012424:CDS | 30.0% |
| !!! | TGTAAACCTTTTTTTGTCTC+TGG | - | chr8.3:2691052-2691071 | MS.gene012424:CDS | 30.0% |
| AAAACCATAAATCATAGGGC+TGG | - | chr8.3:2689395-2689414 | MS.gene012424:intron | 35.0% | |
| AAACTGCAACCAAATGCATT+TGG | - | chr8.3:2687763-2687782 | MS.gene012424:CDS | 35.0% | |
| AAAGGAATGCCACAAAGAAA+TGG | + | chr8.3:2690098-2690117 | None:intergenic | 35.0% | |
| AAATTTCATCGTCGACGATT+TGG | - | chr8.3:2687562-2687581 | MS.gene012424:intron | 35.0% | |
| AACATGATGAATTACTGCGA+AGG | - | chr8.3:2688026-2688045 | MS.gene012424:intron | 35.0% | |
| AAGAAAAAATAGCAGATGCC+AGG | + | chr8.3:2689150-2689169 | None:intergenic | 35.0% | |
| ACAATTTCTGCAGGTAACTT+CGG | + | chr8.3:2688916-2688935 | None:intergenic | 35.0% | |
| ACTTGTGTTGAAGATATGGT+TGG | - | chr8.3:2690737-2690756 | MS.gene012424:intron | 35.0% | |
| ATCATGGTTAATGGCATTGT+TGG | - | chr8.3:2687667-2687686 | MS.gene012424:intron | 35.0% | |
| CATCAGAAAGTCTTTACCTT+TGG | + | chr8.3:2690800-2690819 | None:intergenic | 35.0% | |
| CATCAGAATCCTCAATCATT+CGG | + | chr8.3:2690223-2690242 | None:intergenic | 35.0% | |
| CATTTAATTGTAGGGAGAAC+TGG | - | chr8.3:2690146-2690165 | MS.gene012424:intron | 35.0% | |
| CTACAAGAACCGGAAAATTA+AGG | + | chr8.3:2690072-2690091 | None:intergenic | 35.0% | |
| GGAAGTTATCTATCATGTGA+AGG | + | chr8.3:2692512-2692531 | None:intergenic | 35.0% | |
| GTGTATTATGAAGTGCATCT+CGG | - | chr8.3:2690521-2690540 | MS.gene012424:intron | 35.0% | |
| TAGGGTAGTCAAATTCAGAT+TGG | + | chr8.3:2691868-2691887 | None:intergenic | 35.0% | |
| TATGATTATGAGAGTGAAGG+TGG | + | chr8.3:2687706-2687725 | None:intergenic | 35.0% | |
| TCCATCATAGTCAAGCTATT+GGG | - | chr8.3:2689952-2689971 | MS.gene012424:intron | 35.0% | |
| TTCCATCATAGTCAAGCTAT+TGG | - | chr8.3:2689951-2689970 | MS.gene012424:intron | 35.0% | |
| TTGAGCATCAATAAACTGAC+CGG | + | chr8.3:2688146-2688165 | None:intergenic | 35.0% | |
| TTGATACGAAAGTTACAGAC+CGG | - | chr8.3:2689469-2689488 | MS.gene012424:intron | 35.0% | |
| TTGTAGCTTCCATTTCTTTG+TGG | - | chr8.3:2690086-2690105 | MS.gene012424:intron | 35.0% | |
| TTTGTAGAGGAGATGATAAG+GGG | - | chr8.3:2692172-2692191 | MS.gene012424:intron | 35.0% | |
| ! | AACCTTCCATGTCAATTTTC+TGG | + | chr8.3:2690989-2691008 | None:intergenic | 35.0% |
| ! | AACTTCGGCTTCTAATGTTT+TGG | + | chr8.3:2688901-2688920 | None:intergenic | 35.0% |
| ! | AGGATAGTCGTGCATATTTT+TGG | - | chr8.3:2691150-2691169 | MS.gene012424:CDS | 35.0% |
| ! | ATGTTTTGTGGGACCTAAAT+AGG | + | chr8.3:2688011-2688030 | None:intergenic | 35.0% |
| ! | CACAAATCTCTAAGGAAACA+AGG | + | chr8.3:2689357-2689376 | None:intergenic | 35.0% |
| ! | GAATTTTCAGTTCTGCTGAT+TGG | - | chr8.3:2687785-2687804 | MS.gene012424:intron | 35.0% |
| ! | GATGAGGAAATTTTCATCTC+AGG | - | chr8.3:2691112-2691131 | MS.gene012424:CDS | 35.0% |
| ! | TCTTTTGTGGCACATTCTTT+GGG | - | chr8.3:2688831-2688850 | MS.gene012424:intron | 35.0% |
| ! | TGGTAAACATCTTTTCCTCA+CGG | - | chr8.3:2690166-2690185 | MS.gene012424:intron | 35.0% |
| ! | TTTGAGATGCTCTTCTTTCA+AGG | + | chr8.3:2690121-2690140 | None:intergenic | 35.0% |
| ! | TTTTCCAGCCCTATGATTTA+TGG | + | chr8.3:2689402-2689421 | None:intergenic | 35.0% |
| !! | AAATCCAGCTCTAGATGAAA+GGG | - | chr8.3:2692339-2692358 | MS.gene012424:CDS | 35.0% |
| !! | AGTCATCTGTGCTTTTTGAT+TGG | - | chr8.3:2689204-2689223 | MS.gene012424:intron | 35.0% |
| !! | ATAATGATGATGATGGCGTA+AGG | + | chr8.3:2687501-2687520 | None:intergenic | 35.0% |
| !! | ATATAGCCACTTGGATTAGT+CGG | - | chr8.3:2691900-2691919 | MS.gene012424:intron | 35.0% |
| !! | CTTGACTTGTGTTGAAGATA+TGG | - | chr8.3:2690733-2690752 | MS.gene012424:intron | 35.0% |
| !! | TAAATCCAGCTCTAGATGAA+AGG | - | chr8.3:2692338-2692357 | MS.gene012424:CDS | 35.0% |
| !! | TAATCTTCAGTTGATGGTTC+TGG | + | chr8.3:2689558-2689577 | None:intergenic | 35.0% |
| !! | TAGCTTCTCATTTTGGTGAA+CGG | - | chr8.3:2688407-2688426 | MS.gene012424:intron | 35.0% |
| !! | TTGATGGTTCTGGAATCATA+TGG | + | chr8.3:2689548-2689567 | None:intergenic | 35.0% |
| !!! | TAGTCGTGCATATTTTTGGT+AGG | - | chr8.3:2691154-2691173 | MS.gene012424:CDS | 35.0% |
| AAACTTCCAAAGAAAGGCAG+AGG | + | chr8.3:2691697-2691716 | None:intergenic | 40.0% | |
| AATCTCAGGTGAAAACCTAC+TGG | - | chr8.3:2692460-2692479 | MS.gene012424:CDS | 40.0% | |
| AATTTCCATTGAACCTTGGG+TGG | - | chr8.3:2691481-2691500 | MS.gene012424:intron | 40.0% | |
| ACATTGTACACACTGAAGGT+GGG | - | chr8.3:2690919-2690938 | MS.gene012424:CDS | 40.0% | |
| ACTTAAGTGTGTGTGCATAC+TGG | - | chr8.3:2690024-2690043 | MS.gene012424:intron | 40.0% | |
| ATGTTCTTCTTGTAGGAGCT+AGG | - | chr8.3:2691514-2691533 | MS.gene012424:intron | 40.0% | |
| CACCTTGTCATCATGGTTAA+TGG | - | chr8.3:2687658-2687677 | MS.gene012424:intron | 40.0% | |
| CAGAAATTGTGACTGCAAAG+AGG | - | chr8.3:2688926-2688945 | MS.gene012424:intron | 40.0% | |
| CAGATGCCAGGCAAAAATAA+AGG | + | chr8.3:2689138-2689157 | None:intergenic | 40.0% | |
| CATAGTCAAGCTATTGGGAT+AGG | - | chr8.3:2689957-2689976 | MS.gene012424:intron | 40.0% | |
| CTTCAGTGTGTACAATGTGT+GGG | + | chr8.3:2690917-2690936 | None:intergenic | 40.0% | |
| GAAATGGAAGCTACAAGAAC+CGG | + | chr8.3:2690082-2690101 | None:intergenic | 40.0% | |
| GATGCTCTTCTTTCAAGGAA+AGG | + | chr8.3:2690116-2690135 | None:intergenic | 40.0% | |
| GCTTTCAGAAGAGTAAACAG+CGG | - | chr8.3:2692230-2692249 | MS.gene012424:intron | 40.0% | |
| GGAACATCTAGCTGAAATTG+TGG | + | chr8.3:2692416-2692435 | None:intergenic | 40.0% | |
| GTGTTGAAGATATGGTTGGA+TGG | - | chr8.3:2690741-2690760 | MS.gene012424:intron | 40.0% | |
| TACTATCTATTGTCAGACGC+TGG | - | chr8.3:2688790-2688809 | MS.gene012424:intron | 40.0% | |
| TCCCAATAGCTTGACTATGA+TGG | + | chr8.3:2689956-2689975 | None:intergenic | 40.0% | |
| TGCCAGGCAAAAATAAAGGT+AGG | + | chr8.3:2689134-2689153 | None:intergenic | 40.0% | |
| TGCCATTAACCATGATGACA+AGG | + | chr8.3:2687663-2687682 | None:intergenic | 40.0% | |
| TGTATCACGTATCAGCATCA+TGG | - | chr8.3:2689096-2689115 | MS.gene012424:intron | 40.0% | |
| TTAACCATGATGACAAGGTG+AGG | + | chr8.3:2687658-2687677 | None:intergenic | 40.0% | |
| TTTGCAGTCACAATTTCTGC+AGG | + | chr8.3:2688925-2688944 | None:intergenic | 40.0% | |
| ! | AAAAGCACAGATGACTGTGA+TGG | + | chr8.3:2689200-2689219 | None:intergenic | 40.0% |
| ! | AGAGATTTTGCCGCCTATTT+AGG | - | chr8.3:2687995-2688014 | MS.gene012424:intron | 40.0% |
| ! | AGTTCTGCTGATTGGAGATA+TGG | - | chr8.3:2687793-2687812 | MS.gene012424:intron | 40.0% |
| ! | CTACAGAGATTTTCTTACGG+TGG | + | chr8.3:2687861-2687880 | None:intergenic | 40.0% |
| ! | CTCTTTTGTGGCACATTCTT+TGG | - | chr8.3:2688830-2688849 | MS.gene012424:intron | 40.0% |
| ! | GAAAACCTACTGGTTGCATT+CGG | - | chr8.3:2692470-2692489 | MS.gene012424:CDS | 40.0% |
| ! | GGGAAGTATAAGAGACCAAA+AGG | + | chr8.3:2688664-2688683 | None:intergenic | 40.0% |
| ! | GTTGCAGAAGATCTCTTTTG+TGG | - | chr8.3:2688818-2688837 | MS.gene012424:intron | 40.0% |
| ! | TGATGAACTGATTCTTGCCA+TGG | - | chr8.3:2691769-2691788 | MS.gene012424:intron | 40.0% |
| ! | TTCAAGTTCAAACCCAAGCT+TGG | - | chr8.3:2687946-2687965 | MS.gene012424:intron | 40.0% |
| ! | TTTTGTGGGACCTAAATAGG+CGG | + | chr8.3:2688008-2688027 | None:intergenic | 40.0% |
| !! | AAGTTACAGACCGGTTTTCA+TGG | - | chr8.3:2689478-2689497 | MS.gene012424:intron | 40.0% |
| !! | CGTGAATTGACTTGGTTTGA+GGG | - | chr8.3:2688235-2688254 | MS.gene012424:intron | 40.0% |
| !! | GATCTCTTCTCATCGCTTTT+TGG | - | chr8.3:2687527-2687546 | MS.gene012424:intron | 40.0% |
| !! | TCGTGAATTGACTTGGTTTG+AGG | - | chr8.3:2688234-2688253 | MS.gene012424:intron | 40.0% |
| !!! | CACCTACCTTTATTTTTGCC+TGG | - | chr8.3:2689129-2689148 | MS.gene012424:intron | 40.0% |
| !!! | GTTTGAGGGTGTAGTTTTGA+CGG | - | chr8.3:2688249-2688268 | MS.gene012424:intron | 40.0% |
| AAACTCGGTATCATGACCCA+AGG | + | chr8.3:2691927-2691946 | None:intergenic | 45.0% | |
| AAAGAGATCTTCTGCAACCC+AGG | + | chr8.3:2688816-2688835 | None:intergenic | 45.0% | |
| AACCTACCTCTGCCTTTCTT+TGG | - | chr8.3:2691688-2691707 | MS.gene012424:intron | 45.0% | |
| ATAATTAGCTCGTGTGGCAG+AGG | + | chr8.3:2690635-2690654 | None:intergenic | 45.0% | |
| ATGACAAGGTGAGGAGGAAT+GGG | + | chr8.3:2687649-2687668 | None:intergenic | 45.0% | |
| ATGTTCCGTGCCATGAAAAC+CGG | + | chr8.3:2689491-2689510 | None:intergenic | 45.0% | |
| ATGTTGACGCCGAATTGATG+AGG | + | chr8.3:2690771-2690790 | None:intergenic | 45.0% | |
| CACATTGTACACACTGAAGG+TGG | - | chr8.3:2690918-2690937 | MS.gene012424:CDS | 45.0% | |
| CAGAATCCTCAATCATTCGG+AGG | + | chr8.3:2690220-2690239 | None:intergenic | 45.0% | |
| CATACTATACCAACCACCCA+AGG | + | chr8.3:2691497-2691516 | None:intergenic | 45.0% | |
| CATTATGAAGCCAGAATCGC+TGG | - | chr8.3:2688981-2689000 | MS.gene012424:CDS | 45.0% | |
| CCACACATTGTACACACTGA+AGG | - | chr8.3:2690915-2690934 | MS.gene012424:CDS | 45.0% | |
| CCTTCAGTGTGTACAATGTG+TGG | + | chr8.3:2690918-2690937 | None:intergenic | 45.0% | |
| GCGTCAACATGAACTTCCAA+AGG | - | chr8.3:2690781-2690800 | MS.gene012424:intron | 45.0% | |
| GGATGGCCTATGAAGATATC+TGG | + | chr8.3:2689679-2689698 | None:intergenic | 45.0% | |
| GGCCAGAAAATTGACATGGA+AGG | - | chr8.3:2690984-2691003 | MS.gene012424:CDS | 45.0% | |
| TACTGCTCACAGTACAATCC+AGG | - | chr8.3:2692255-2692274 | MS.gene012424:intron | 45.0% | |
| TCAAATGTCCATACCTGCAC+AGG | + | chr8.3:2689700-2689719 | None:intergenic | 45.0% | |
| TCAATCATTCGGAGGAGAAG+AGG | + | chr8.3:2690212-2690231 | None:intergenic | 45.0% | |
| TCTTCTCCTCCGAATGATTG+AGG | - | chr8.3:2690211-2690230 | MS.gene012424:intron | 45.0% | |
| TGAACTTGAACCAGTGACCT+TGG | + | chr8.3:2687936-2687955 | None:intergenic | 45.0% | |
| TGGAGGCCAGAAAATTGACA+TGG | - | chr8.3:2690980-2690999 | MS.gene012424:CDS | 45.0% | |
| TGGTTAATGGCATTGTTGGC+AGG | - | chr8.3:2687671-2687690 | MS.gene012424:intron | 45.0% | |
| TGGTTCAAGAGGACATAGAC+AGG | - | chr8.3:2689046-2689065 | MS.gene012424:CDS | 45.0% | |
| TGTCCTCTTGAACCAAGATG+CGG | + | chr8.3:2689041-2689060 | None:intergenic | 45.0% | |
| TTCCAAAGAAAGGCAGAGGT+AGG | + | chr8.3:2691693-2691712 | None:intergenic | 45.0% | |
| TTTGTGGCACATTCTTTGGG+AGG | - | chr8.3:2688834-2688853 | MS.gene012424:intron | 45.0% | |
| ! | AATGCCCTTTCATCTAGAGC+TGG | + | chr8.3:2692346-2692365 | None:intergenic | 45.0% |
| ! | GATGGAGCACCTCATCAATT+CGG | - | chr8.3:2690759-2690778 | MS.gene012424:intron | 45.0% |
| ! | GTGTTGATACTATGGGTGAG+AGG | - | chr8.3:2688602-2688621 | MS.gene012424:intron | 45.0% |
| ! | TCTAGCTTAACCAAGGTCAC+TGG | - | chr8.3:2687923-2687942 | MS.gene012424:intron | 45.0% |
| ! | TGCTGATTGGAGATATGGTG+CGG | - | chr8.3:2687798-2687817 | MS.gene012424:intron | 45.0% |
| ! | TTTCATCGTCGACGATTTGG+TGG | - | chr8.3:2687565-2687584 | MS.gene012424:intron | 45.0% |
| !! | ACTTGGATTAGTCGGTCCTT+GGG | - | chr8.3:2691908-2691927 | MS.gene012424:intron | 45.0% |
| !! | GCATGTGCTGACTTTGACAT+GGG | + | chr8.3:2690492-2690511 | None:intergenic | 45.0% |
| !! | GCTCTCTTCTAGCTTAACCA+AGG | - | chr8.3:2687916-2687935 | MS.gene012424:intron | 45.0% |
| !! | TGCATGTGCTGACTTTGACA+TGG | + | chr8.3:2690493-2690512 | None:intergenic | 45.0% |
| !!! | GGCTAGCTGAAGAGGTATTT+TGG | - | chr8.3:2688623-2688642 | MS.gene012424:intron | 45.0% |
| ACCAACCACCCAAGGTTCAA+TGG | + | chr8.3:2691489-2691508 | None:intergenic | 50.0% | |
| ACCATCCGAATGCAACCAGT+AGG | + | chr8.3:2692478-2692497 | None:intergenic | 50.0% | |
| ACCATGATGACAAGGTGAGG+AGG | + | chr8.3:2687655-2687674 | None:intergenic | 50.0% | |
| ATCATTCGGAGGAGAAGAGG+AGG | + | chr8.3:2690209-2690228 | None:intergenic | 50.0% | |
| ATGTCCATACCTGCACAGGA+TGG | + | chr8.3:2689696-2689715 | None:intergenic | 50.0% | |
| CAAGGACCGACTAATCCAAG+TGG | + | chr8.3:2691909-2691928 | None:intergenic | 50.0% | |
| CGGTGGACGATGACTTTATC+TGG | + | chr8.3:2687844-2687863 | None:intergenic | 50.0% | |
| GAGTTTATTGACAGCCCTGC+AGG | - | chr8.3:2690601-2690620 | MS.gene012424:intron | 50.0% | |
| GATGACAAGGTGAGGAGGAA+TGG | + | chr8.3:2687650-2687669 | None:intergenic | 50.0% | |
| GATGATAAGGGGTCTCACTC+AGG | - | chr8.3:2692183-2692202 | MS.gene012424:intron | 50.0% | |
| GGGTCTCACTCAGGTTCATT+GGG | - | chr8.3:2692192-2692211 | MS.gene012424:intron | 50.0% | |
| TCCATTGAACCTTGGGTGGT+TGG | - | chr8.3:2691485-2691504 | MS.gene012424:intron | 50.0% | |
| TCCTCCTCACCTTGTCATCA+TGG | - | chr8.3:2687651-2687670 | MS.gene012424:intron | 50.0% | |
| TTCCATCATCGTTGTCCGTG+AGG | + | chr8.3:2690184-2690203 | None:intergenic | 50.0% | |
| TTCCTCACGGACAACGATGA+TGG | - | chr8.3:2690179-2690198 | MS.gene012424:intron | 50.0% | |
| ! | ACATTCTTTGGGAGGCTTGG+TGG | - | chr8.3:2688842-2688861 | MS.gene012424:intron | 50.0% |
| ! | ACCTACTGGTTGCATTCGGA+TGG | - | chr8.3:2692474-2692493 | MS.gene012424:CDS | 50.0% |
| !! | ACAGACCGGTTTTCATGGCA+CGG | - | chr8.3:2689483-2689502 | MS.gene012424:intron | 50.0% |
| !! | CACTTGGATTAGTCGGTCCT+TGG | - | chr8.3:2691907-2691926 | MS.gene012424:intron | 50.0% |
| !! | TGGCTCTAAACCAGCGATTC+TGG | + | chr8.3:2688994-2689013 | None:intergenic | 50.0% |
| ACCCAAGCTTGGACAGACAG+CGG | - | chr8.3:2687957-2687976 | MS.gene012424:intron | 55.0% | |
| ACGCCGCATCTTGGTTCAAG+AGG | - | chr8.3:2689035-2689054 | MS.gene012424:CDS | 55.0% | |
| CTTCATAGGCCATCCTGTGC+AGG | - | chr8.3:2689684-2689703 | MS.gene012424:intron | 55.0% | |
| GGGGTCTCACTCAGGTTCAT+TGG | - | chr8.3:2692191-2692210 | MS.gene012424:intron | 55.0% | |
| GTGCGGAGCAGTTTCTCAAG+AGG | - | chr8.3:2687815-2687834 | MS.gene012424:intron | 55.0% | |
| TAGGCCATCCTGTGCAGGTA+TGG | - | chr8.3:2689689-2689708 | MS.gene012424:intron | 55.0% | |
| TCTATTGTCAGACGCTGGCC+TGG | - | chr8.3:2688795-2688814 | MS.gene012424:intron | 55.0% | |
| TCTTGAACCAAGATGCGGCG+TGG | + | chr8.3:2689036-2689055 | None:intergenic | 55.0% | |
| ! | CTATTGTCAGACGCTGGCCT+GGG | - | chr8.3:2688796-2688815 | MS.gene012424:intron | 55.0% |
| ! | GGCACATTCTTTGGGAGGCT+TGG | - | chr8.3:2688839-2688858 | MS.gene012424:intron | 55.0% |
| ! | TCAGGTTCATTGGGAGCGTG+TGG | - | chr8.3:2692201-2692220 | MS.gene012424:intron | 55.0% |
| ACCAAGATGCGGCGTGGCAA+AGG | + | chr8.3:2689030-2689049 | None:intergenic | 60.0% | |
| ACCTTTGCCACGCCGCATCT+TGG | - | chr8.3:2689026-2689045 | MS.gene012424:CDS | 60.0% | |
| GCCGCTGTCTGTCCAAGCTT+GGG | + | chr8.3:2687961-2687980 | None:intergenic | 60.0% | |
| ! | CTCGTGTGGCAGAGGAGCAT+GGG | + | chr8.3:2690627-2690646 | None:intergenic | 60.0% |
| ! | GGGTGAGAGGCTAGCTGAAG+AGG | - | chr8.3:2688615-2688634 | MS.gene012424:intron | 60.0% |
| CGCCGCTGTCTGTCCAAGCT+TGG | + | chr8.3:2687962-2687981 | None:intergenic | 65.0% | |
| GCTCGTGTGGCAGAGGAGCA+TGG | + | chr8.3:2690628-2690647 | None:intergenic | 65.0% | |
| ! | CAGAGGAGCATGGGCCTGCA+GGG | + | chr8.3:2690618-2690637 | None:intergenic | 65.0% |
| ! | GCAGAGGAGCATGGGCCTGC+AGG | + | chr8.3:2690619-2690638 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 2687430 | 2692539 | 2687430 | ID=MS.gene012424 |
| chr8.3 | mRNA | 2687430 | 2692539 | 2687430 | ID=MS.gene012424.t1;Parent=MS.gene012424 |
| chr8.3 | exon | 2692277 | 2692539 | 2692277 | ID=MS.gene012424.t1.exon1;Parent=MS.gene012424.t1 |
| chr8.3 | CDS | 2692277 | 2692539 | 2692277 | ID=cds.MS.gene012424.t1;Parent=MS.gene012424.t1 |
| chr8.3 | exon | 2692107 | 2692174 | 2692107 | ID=MS.gene012424.t1.exon2;Parent=MS.gene012424.t1 |
| chr8.3 | CDS | 2692107 | 2692174 | 2692107 | ID=cds.MS.gene012424.t1;Parent=MS.gene012424.t1 |
| chr8.3 | exon | 2691333 | 2691403 | 2691333 | ID=MS.gene012424.t1.exon3;Parent=MS.gene012424.t1 |
| chr8.3 | CDS | 2691333 | 2691403 | 2691333 | ID=cds.MS.gene012424.t1;Parent=MS.gene012424.t1 |
| chr8.3 | exon | 2690902 | 2691180 | 2690902 | ID=MS.gene012424.t1.exon4;Parent=MS.gene012424.t1 |
| chr8.3 | CDS | 2690902 | 2691180 | 2690902 | ID=cds.MS.gene012424.t1;Parent=MS.gene012424.t1 |
| chr8.3 | exon | 2689714 | 2689877 | 2689714 | ID=MS.gene012424.t1.exon5;Parent=MS.gene012424.t1 |
| chr8.3 | CDS | 2689714 | 2689877 | 2689714 | ID=cds.MS.gene012424.t1;Parent=MS.gene012424.t1 |
| chr8.3 | exon | 2689570 | 2689625 | 2689570 | ID=MS.gene012424.t1.exon6;Parent=MS.gene012424.t1 |
| chr8.3 | CDS | 2689570 | 2689625 | 2689570 | ID=cds.MS.gene012424.t1;Parent=MS.gene012424.t1 |
| chr8.3 | exon | 2689167 | 2689219 | 2689167 | ID=MS.gene012424.t1.exon7;Parent=MS.gene012424.t1 |
| chr8.3 | CDS | 2689167 | 2689219 | 2689167 | ID=cds.MS.gene012424.t1;Parent=MS.gene012424.t1 |
| chr8.3 | exon | 2688964 | 2689084 | 2688964 | ID=MS.gene012424.t1.exon8;Parent=MS.gene012424.t1 |
| chr8.3 | CDS | 2688964 | 2689084 | 2688964 | ID=cds.MS.gene012424.t1;Parent=MS.gene012424.t1 |
| chr8.3 | exon | 2687693 | 2687790 | 2687693 | ID=MS.gene012424.t1.exon9;Parent=MS.gene012424.t1 |
| chr8.3 | CDS | 2687693 | 2687790 | 2687693 | ID=cds.MS.gene012424.t1;Parent=MS.gene012424.t1 |
| chr8.3 | exon | 2687430 | 2687501 | 2687430 | ID=MS.gene012424.t1.exon10;Parent=MS.gene012424.t1 |
| chr8.3 | CDS | 2687430 | 2687501 | 2687430 | ID=cds.MS.gene012424.t1;Parent=MS.gene012424.t1 |
| Gene Sequence |
| Protein sequence |
