Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40236.t1 | XP_003603652.2 | 94.2 | 381 | 17 | 1 | 1 | 381 | 1 | 376 | 4.70E-204 | 720.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40236.t1 | Q08448 | 26.8 | 239 | 131 | 8 | 66 | 295 | 6 | 209 | 4.1e-15 | 84.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40236.t1 | G7J403 | 94.2 | 381 | 17 | 1 | 1 | 381 | 1 | 376 | 3.4e-204 | 720.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050612 | MS.gene40236 | -0.806632 | 7.49E-50 | -1.69E-46 |
| MS.gene054056 | MS.gene40236 | 0.809207 | 2.12E-50 | -1.69E-46 |
| MS.gene055750 | MS.gene40236 | -0.803572 | 3.27E-49 | -1.69E-46 |
| MS.gene055751 | MS.gene40236 | -0.811625 | 6.38E-51 | -1.69E-46 |
| MS.gene055942 | MS.gene40236 | 0.840155 | 1.03E-57 | -1.69E-46 |
| MS.gene059865 | MS.gene40236 | -0.813772 | 2.16E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene66880 | MS.gene40236 | PPI |
| MS.gene046359 | MS.gene40236 | PPI |
| MS.gene40236 | MS.gene035683 | PPI |
| MS.gene40236 | MS.gene018355 | PPI |
| MS.gene012424 | MS.gene40236 | PPI |
| MS.gene57902 | MS.gene40236 | PPI |
| MS.gene40236 | MS.gene66879 | PPI |
| MS.gene40236 | MS.gene042331 | PPI |
| MS.gene40236 | MS.gene038914 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40236.t1 | MTR_3g110530 | 96.073 | 382 | 10 | 1 | 1 | 382 | 1 | 377 | 0.0 | 758 |
| MS.gene40236.t1 | MTR_4g128800 | 57.538 | 325 | 125 | 5 | 64 | 382 | 29 | 346 | 8.59e-130 | 377 |
| MS.gene40236.t1 | MTR_4g128800 | 57.538 | 325 | 125 | 5 | 64 | 382 | 29 | 346 | 2.33e-129 | 377 |
| MS.gene40236.t1 | MTR_4g128800 | 60.400 | 250 | 91 | 4 | 64 | 307 | 29 | 276 | 2.44e-105 | 311 |
| MS.gene40236.t1 | MTR_1g040460 | 50.629 | 318 | 140 | 5 | 66 | 382 | 31 | 332 | 2.52e-104 | 311 |
| MS.gene40236.t1 | MTR_8g086260 | 44.144 | 333 | 172 | 4 | 61 | 380 | 85 | 416 | 1.15e-91 | 283 |
| MS.gene40236.t1 | MTR_8g086260 | 44.144 | 333 | 172 | 4 | 61 | 380 | 85 | 416 | 1.33e-91 | 282 |
| MS.gene40236.t1 | MTR_2g015960 | 43.202 | 331 | 173 | 6 | 61 | 380 | 79 | 405 | 3.02e-83 | 261 |
| MS.gene40236.t1 | MTR_8g086260 | 48.659 | 261 | 132 | 2 | 61 | 320 | 85 | 344 | 1.80e-82 | 257 |
| MS.gene40236.t1 | MTR_8g086260 | 50.000 | 244 | 120 | 2 | 61 | 303 | 85 | 327 | 1.12e-79 | 248 |
| MS.gene40236.t1 | MTR_2g015960 | 48.193 | 249 | 124 | 3 | 61 | 307 | 18 | 263 | 2.11e-74 | 232 |
| MS.gene40236.t1 | MTR_2g015960 | 48.193 | 249 | 124 | 3 | 61 | 307 | 79 | 324 | 2.62e-73 | 231 |
| MS.gene40236.t1 | MTR_8g086260 | 48.035 | 229 | 117 | 2 | 61 | 288 | 85 | 312 | 2.90e-71 | 226 |
| MS.gene40236.t1 | MTR_8g086260 | 48.035 | 229 | 117 | 2 | 61 | 288 | 85 | 312 | 4.71e-71 | 225 |
| MS.gene40236.t1 | MTR_6g005650 | 94.118 | 85 | 5 | 0 | 133 | 217 | 210 | 294 | 1.69e-49 | 169 |
| MS.gene40236.t1 | MTR_7g405800 | 91.765 | 85 | 7 | 0 | 133 | 217 | 143 | 227 | 1.03e-48 | 164 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40236.t1 | AT1G10040 | 59.599 | 349 | 130 | 6 | 36 | 383 | 53 | 391 | 6.96e-143 | 412 |
| MS.gene40236.t1 | AT1G10040 | 59.366 | 347 | 130 | 6 | 36 | 381 | 53 | 389 | 6.32e-142 | 410 |
| MS.gene40236.t1 | AT4G25770 | 51.297 | 347 | 131 | 6 | 48 | 383 | 78 | 397 | 8.70e-117 | 346 |
| MS.gene40236.t1 | AT4G25770 | 51.014 | 345 | 131 | 6 | 48 | 381 | 78 | 395 | 2.59e-115 | 342 |
| MS.gene40236.t1 | AT5G51180 | 52.336 | 321 | 135 | 6 | 62 | 381 | 31 | 334 | 2.87e-108 | 322 |
| MS.gene40236.t1 | AT5G51180 | 52.336 | 321 | 135 | 6 | 62 | 381 | 31 | 334 | 2.87e-108 | 322 |
| MS.gene40236.t1 | AT1G29120 | 44.379 | 338 | 162 | 6 | 58 | 380 | 94 | 420 | 1.36e-88 | 274 |
| MS.gene40236.t1 | AT1G29120 | 44.379 | 338 | 162 | 6 | 58 | 380 | 95 | 421 | 1.61e-88 | 275 |
| MS.gene40236.t1 | AT1G29120 | 44.379 | 338 | 162 | 6 | 58 | 380 | 94 | 420 | 1.70e-88 | 275 |
| MS.gene40236.t1 | AT1G29120 | 44.379 | 338 | 162 | 6 | 58 | 380 | 94 | 420 | 1.70e-88 | 275 |
| MS.gene40236.t1 | AT1G29120 | 44.248 | 339 | 162 | 7 | 58 | 380 | 94 | 421 | 6.39e-87 | 271 |
| MS.gene40236.t1 | AT1G29120 | 47.407 | 270 | 132 | 4 | 58 | 326 | 94 | 354 | 9.59e-80 | 250 |
| MS.gene40236.t1 | AT1G29120 | 47.407 | 270 | 132 | 4 | 58 | 326 | 94 | 354 | 1.30e-79 | 250 |
| MS.gene40236.t1 | AT1G29120 | 46.983 | 232 | 114 | 3 | 58 | 288 | 94 | 317 | 1.15e-68 | 219 |
Find 83 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTTGATCATTATGGTTAA+TGG | 0.242137 | 3.2:+88602203 | MS.gene40236:CDS |
| CCCTACTCACTTGATCATTA+TGG | 0.263643 | 3.2:+88602196 | MS.gene40236:CDS |
| TGTATTGCAGTGCTCATAAT+TGG | 0.264626 | 3.2:+88602336 | MS.gene40236:intron |
| TTCTCTTCAGGTCTGCTTTA+CGG | 0.279950 | 3.2:+88604321 | MS.gene40236:intron |
| TCATTTATAGCTCATTCTTT+AGG | 0.292897 | 3.2:+88603585 | MS.gene40236:CDS |
| ACAATGTACAATAACATCAT+AGG | 0.313578 | 3.2:-88602393 | None:intergenic |
| ATTGAAGTTGTTGATGCTTC+TGG | 0.317200 | 3.2:+88602161 | MS.gene40236:CDS |
| GTTATGTGGATTTCACTCTT+TGG | 0.332758 | 3.2:+88604080 | MS.gene40236:CDS |
| GCAGACGTAATAAAATTAAT+AGG | 0.342709 | 3.2:-88603756 | None:intergenic |
| GATCCCAATTCACTGTTGTT+AGG | 0.351788 | 3.2:-88605828 | None:intergenic |
| TCTCGTCTTTCACGGTTTCT+TGG | 0.354731 | 3.2:+88604114 | MS.gene40236:CDS |
| TCTCGCACATAATGCAATTC+AGG | 0.356007 | 3.2:+88605888 | MS.gene40236:CDS |
| GAGGCCTAACAACAGTGAAT+TGG | 0.373395 | 3.2:+88605824 | MS.gene40236:CDS |
| TATTTCTAAGGAACTATCTC+AGG | 0.376332 | 3.2:+88603653 | MS.gene40236:CDS |
| AAGTTGAAATTCCCCAAGTT+TGG | 0.377997 | 3.2:+88602095 | MS.gene40236:CDS |
| TCACGGTTTCTTGGTAAAAC+AGG | 0.379925 | 3.2:+88604123 | MS.gene40236:CDS |
| TTACATGAATTTAATATCTT+CGG | 0.384225 | 3.2:-88604214 | None:intergenic |
| TTATGAGAGAGATATTTCTA+AGG | 0.386599 | 3.2:+88603641 | MS.gene40236:CDS |
| TCTTCAACATTGACATTTGA+CGG | 0.387095 | 3.2:+88603296 | MS.gene40236:CDS |
| GATTCACTTGGAACTTCCTC+TGG | 0.397952 | 3.2:-88604689 | None:intergenic |
| GATTCTGAAACAACCAAACT+TGG | 0.398649 | 3.2:-88602108 | None:intergenic |
| TCTAACATGACATTCTTGAT+TGG | 0.415522 | 3.2:-88603703 | None:intergenic |
| GAATCCAACATGATGCTAAA+GGG | 0.419749 | 3.2:+88602126 | MS.gene40236:CDS |
| CTTTAGGTACCTTTGTTATG+TGG | 0.429412 | 3.2:+88604066 | MS.gene40236:intron |
| AGGCCTAACAACAGTGAATT+GGG | 0.430321 | 3.2:+88605825 | MS.gene40236:CDS |
| CTGCAAAGCAATTTCTCAAA+AGG | 0.432708 | 3.2:+88602366 | MS.gene40236:CDS |
| ATTATGGTTAATGGTCTCAT+TGG | 0.432977 | 3.2:+88602212 | MS.gene40236:CDS |
| AAACAGCATCTCGTCTTTCA+CGG | 0.439813 | 3.2:+88604106 | MS.gene40236:CDS |
| AGAATCCAACATGATGCTAA+AGG | 0.445116 | 3.2:+88602125 | MS.gene40236:CDS |
| TGGTTAATGGTCTCATTGGC+AGG | 0.445481 | 3.2:+88602216 | MS.gene40236:CDS |
| GATGGAGCACATCATCTATA+AGG | 0.445579 | 3.2:+88604493 | MS.gene40236:CDS |
| CTTCGGAGTCACGAACCATC+TGG | 0.449587 | 3.2:-88604197 | None:intergenic |
| ATAGGCAACGCGACGTTTGA+AGG | 0.458227 | 3.2:-88604345 | None:intergenic |
| TTTGACGGTGTTGATGTAAC+GGG | 0.476103 | 3.2:+88603311 | MS.gene40236:CDS |
| CAATGTACAATAACATCATA+GGG | 0.477170 | 3.2:-88602392 | None:intergenic |
| TCCAATGTTAGTAGTGGATC+CGG | 0.480213 | 3.2:+88604710 | MS.gene40236:CDS |
| TTCCTCTGGAAGAACGGAAG+TGG | 0.484010 | 3.2:-88604675 | None:intergenic |
| CTACTAACATTGGATTCACT+TGG | 0.486876 | 3.2:-88604701 | None:intergenic |
| ACGTCAGCTTCAGTGGTAGT+AGG | 0.487212 | 3.2:+88605857 | MS.gene40236:CDS |
| TAAAACGCCACCCAAGTGTT+CGG | 0.489692 | 3.2:+88603556 | MS.gene40236:CDS |
| TTTATAGCTCATTCTTTAGG+TGG | 0.491854 | 3.2:+88603588 | MS.gene40236:CDS |
| CTTTAGGTGGCTTGATAGCA+AGG | 0.492030 | 3.2:+88603601 | MS.gene40236:CDS |
| ACCGGATCCACTACTAACAT+TGG | 0.495965 | 3.2:-88604711 | None:intergenic |
| ACAACGCTATGTTGAACCTT+GGG | 0.503566 | 3.2:-88602026 | None:intergenic |
| AACAACGCTATGTTGAACCT+TGG | 0.505025 | 3.2:-88602027 | None:intergenic |
| AATATCTCTCTCATAAAGCT+TGG | 0.517633 | 3.2:-88603634 | None:intergenic |
| CCATAATGATCAAGTGAGTA+GGG | 0.520538 | 3.2:-88602196 | None:intergenic |
| ACCTCCTCTTCTTCTCCAGA+TGG | 0.522445 | 3.2:+88604182 | MS.gene40236:CDS |
| CATCCCCTTTAGCATCATGT+TGG | 0.522722 | 3.2:-88602130 | None:intergenic |
| CGAATTGACGTCAGCTTCAG+TGG | 0.524198 | 3.2:+88605850 | MS.gene40236:CDS |
| ACGCCGCACCTTGGTTGTAG+AGG | 0.533774 | 3.2:+88603780 | MS.gene40236:CDS |
| ATTCTGAAACAACCAAACTT+GGG | 0.536584 | 3.2:-88602107 | None:intergenic |
| GACTCCTAAATAGAGCTAGT+TGG | 0.537639 | 3.2:+88604471 | MS.gene40236:intron |
| CGCCGCACCTTGGTTGTAGA+GGG | 0.541933 | 3.2:+88603781 | MS.gene40236:CDS |
| ACGTCTGCAACGCCGCACCT+TGG | 0.547946 | 3.2:+88603771 | MS.gene40236:CDS |
| TGTCATGTTAGAAAATATGA+AGG | 0.548935 | 3.2:+88603714 | MS.gene40236:CDS |
| TCCTCTGGAAGAACGGAAGT+GGG | 0.550815 | 3.2:-88604674 | None:intergenic |
| GTCTCTACATTTACAATGTG+TGG | 0.550977 | 3.2:-88604644 | None:intergenic |
| TGGAACTTCCTCTGGAAGAA+CGG | 0.558559 | 3.2:-88604681 | None:intergenic |
| GCTTATGCCCTCTACAACCA+AGG | 0.563131 | 3.2:-88603788 | None:intergenic |
| ACCATAATGATCAAGTGAGT+AGG | 0.563645 | 3.2:-88602197 | None:intergenic |
| CGAACCATCTGGAGAAGAAG+AGG | 0.566975 | 3.2:-88604186 | None:intergenic |
| CCTAAATAGAGCTAGTTGGA+TGG | 0.569660 | 3.2:+88604475 | MS.gene40236:intron |
| ACCCACTTCCGTTCTTCCAG+AGG | 0.581065 | 3.2:+88604673 | MS.gene40236:CDS |
| CAACATGATGCTAAAGGGGA+TGG | 0.581086 | 3.2:+88602131 | MS.gene40236:CDS |
| AGTGAATCCAATGTTAGTAG+TGG | 0.581455 | 3.2:+88604704 | MS.gene40236:CDS |
| TCCGGTAAAATTGACTTCGA+AGG | 0.589799 | 3.2:+88604728 | MS.gene40236:CDS |
| ATTTCTAAGGAACTATCTCA+GGG | 0.594450 | 3.2:+88603654 | MS.gene40236:CDS |
| ATTTGACGGTGTTGATGTAA+CGG | 0.596656 | 3.2:+88603310 | MS.gene40236:CDS |
| TGGTTGTAGAGGGCATAAGC+AGG | 0.598834 | 3.2:+88603791 | MS.gene40236:CDS |
| TTCTGAAACAACCAAACTTG+GGG | 0.598993 | 3.2:-88602106 | None:intergenic |
| AATCCAACATGATGCTAAAG+GGG | 0.615989 | 3.2:+88602127 | MS.gene40236:CDS |
| GGGAAATAGATTAGCAGAGG+AGG | 0.625847 | 3.2:+88603331 | MS.gene40236:CDS |
| GTCATAACGAATATTTGCAT+AGG | 0.638991 | 3.2:-88604363 | None:intergenic |
| ACCATCTGGAGAAGAAGAGG+AGG | 0.646740 | 3.2:-88604183 | None:intergenic |
| GCGTAGAAACGAGCTTCCAA+AGG | 0.649589 | 3.2:+88604515 | MS.gene40236:CDS |
| AACGGGAAATAGATTAGCAG+AGG | 0.651204 | 3.2:+88603328 | MS.gene40236:CDS |
| CTCGCAGAGGAAATGATCAG+AGG | 0.670602 | 3.2:+88605805 | MS.gene40236:intron |
| GGAATCACAACAGATACCCA+AGG | 0.675906 | 3.2:+88602010 | MS.gene40236:CDS |
| GAGTGAAATCCACATAACAA+AGG | 0.677854 | 3.2:-88604075 | None:intergenic |
| TGCCCTCTACAACCAAGGTG+CGG | 0.704644 | 3.2:-88603783 | None:intergenic |
| AATGTACAATAACATCATAG+GGG | 0.707394 | 3.2:-88602391 | None:intergenic |
| TTTCTAAGGAACTATCTCAG+GGG | 0.757402 | 3.2:+88603655 | MS.gene40236:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCAATTAATGAATATAAAAT+TGG | - | chr3.2:88605509-88605528 | None:intergenic | 10.0% |
| !!! | AAATTGGATTTAAATTTTAA+AGG | - | chr3.2:88605493-88605512 | None:intergenic | 10.0% |
| !!! | ATTTTATCTTTTTGAAAAAA+TGG | + | chr3.2:88604752-88604771 | MS.gene40236:intron | 10.0% |
| !! | AAATTAAGTATATCATATCA+CGG | - | chr3.2:88604561-88604580 | None:intergenic | 15.0% |
| !! | AATTCTATTCTTATTACAAA+GGG | + | chr3.2:88602740-88602759 | MS.gene40236:intron | 15.0% |
| !! | ATTCTTGATATATATCTTAA+AGG | + | chr3.2:88605074-88605093 | MS.gene40236:intron | 15.0% |
| !! | TTACATGAATTTAATATCTT+CGG | - | chr3.2:88604217-88604236 | None:intergenic | 15.0% |
| !! | TTCTTGATATATATCTTAAA+GGG | + | chr3.2:88605075-88605094 | MS.gene40236:intron | 15.0% |
| !!! | AAATCAATTTTTATCAACAT+AGG | + | chr3.2:88603048-88603067 | MS.gene40236:intron | 15.0% |
| !!! | TAAAGTATTAAAACTCATAT+TGG | - | chr3.2:88602256-88602275 | None:intergenic | 15.0% |
| !!! | TATTATTGTAGATATTTTGT+TGG | + | chr3.2:88604982-88605001 | MS.gene40236:intron | 15.0% |
| !!! | TTTTATATTCATTAATTGAG+AGG | + | chr3.2:88605510-88605529 | MS.gene40236:intron | 15.0% |
| !! | AATGATAATAATCGTTAGAA+AGG | - | chr3.2:88602464-88602483 | None:intergenic | 20.0% |
| !! | AATGTAAAGTGATTTATGTT+TGG | - | chr3.2:88602982-88603001 | None:intergenic | 20.0% |
| !! | ACAAAAAGATTTATGTTCAA+TGG | + | chr3.2:88605345-88605364 | MS.gene40236:intron | 20.0% |
| !! | ATATTTGAGTAATCTTCAAA+TGG | - | chr3.2:88604930-88604949 | None:intergenic | 20.0% |
| !! | ATGTAAAGTGATTTATGTTT+GGG | - | chr3.2:88602981-88603000 | None:intergenic | 20.0% |
| !! | GAAGATATTAAATTCATGTA+AGG | + | chr3.2:88604216-88604235 | MS.gene40236:intron | 20.0% |
| !! | GAATTCTATTCTTATTACAA+AGG | + | chr3.2:88602739-88602758 | MS.gene40236:intron | 20.0% |
| !! | TACAATATCTAAAAAGTTCT+AGG | + | chr3.2:88604791-88604810 | MS.gene40236:intron | 20.0% |
| !! | TAGAATTATTACATGTGTTA+AGG | + | chr3.2:88602644-88602663 | MS.gene40236:intron | 20.0% |
| !! | TGAAAAATTAACTTAAACAG+AGG | - | chr3.2:88604962-88604981 | None:intergenic | 20.0% |
| !!! | AACTTTCTAAAAAATGCTTA+TGG | - | chr3.2:88605319-88605338 | None:intergenic | 20.0% |
| !!! | ATACATTTTTTTTTACGCTA+TGG | - | chr3.2:88603990-88604009 | None:intergenic | 20.0% |
| !!! | TTGAAAAAATGGATTTCATT+TGG | + | chr3.2:88604763-88604782 | MS.gene40236:intron | 20.0% |
| ! | AAATATGAAGGAAAAATTGC+AGG | + | chr3.2:88603726-88603745 | MS.gene40236:CDS | 25.0% |
| ! | AATGTACAATAACATCATAG+GGG | - | chr3.2:88602394-88602413 | None:intergenic | 25.0% |
| ! | AATTTATGTCTCCTTTACTA+TGG | + | chr3.2:88603906-88603925 | MS.gene40236:intron | 25.0% |
| ! | ACAATGTACAATAACATCAT+AGG | - | chr3.2:88602396-88602415 | None:intergenic | 25.0% |
| ! | ACTTTAATTGGAATATGCAA+TGG | - | chr3.2:88604421-88604440 | None:intergenic | 25.0% |
| ! | AGCTTATGATTATTCACTTA+TGG | + | chr3.2:88605162-88605181 | MS.gene40236:intron | 25.0% |
| ! | ATAATACTCCGTTAATAACT+TGG | + | chr3.2:88602287-88602306 | MS.gene40236:intron | 25.0% |
| ! | ATGATATAAATGCAATGACT+AGG | - | chr3.2:88603086-88603105 | None:intergenic | 25.0% |
| ! | ATGATTATTCACTTATGGAA+AGG | + | chr3.2:88605167-88605186 | MS.gene40236:intron | 25.0% |
| ! | CAATGCATTACATTAAATGA+TGG | - | chr3.2:88603247-88603266 | None:intergenic | 25.0% |
| ! | CAATGTACAATAACATCATA+GGG | - | chr3.2:88602395-88602414 | None:intergenic | 25.0% |
| ! | CTTATACTAGAATGAATAGT+AGG | + | chr3.2:88605271-88605290 | MS.gene40236:intron | 25.0% |
| ! | GCAGACGTAATAAAATTAAT+AGG | - | chr3.2:88603759-88603778 | None:intergenic | 25.0% |
| ! | GTTAATAGCCAAGTTATTAA+CGG | - | chr3.2:88602298-88602317 | None:intergenic | 25.0% |
| ! | TATAATATGAAGCCAGAATT+TGG | + | chr3.2:88602888-88602907 | MS.gene40236:intron | 25.0% |
| ! | TATTATATCTCTTTCTCTTC+AGG | + | chr3.2:88604309-88604328 | MS.gene40236:intron | 25.0% |
| ! | TCATTTATAGCTCATTCTTT+AGG | + | chr3.2:88603585-88603604 | MS.gene40236:CDS | 25.0% |
| ! | TCTTACCATCAGTTAAAAAT+AGG | - | chr3.2:88604155-88604174 | None:intergenic | 25.0% |
| ! | TGAACTAAAACAAAAGGATA+CGG | - | chr3.2:88604388-88604407 | None:intergenic | 25.0% |
| ! | TGCATTGAACAATAAATTCA+AGG | - | chr3.2:88602942-88602961 | None:intergenic | 25.0% |
| ! | TGTCATGTTAGAAAATATGA+AGG | + | chr3.2:88603714-88603733 | MS.gene40236:CDS | 25.0% |
| ! | TTCATGTAAGGTTTATTGTT+TGG | + | chr3.2:88604228-88604247 | MS.gene40236:intron | 25.0% |
| !! | AATATGTCTTTTCCAATTCA+AGG | - | chr3.2:88605600-88605619 | None:intergenic | 25.0% |
| !! | AATTTTGTCTTCTCGAAAAA+TGG | - | chr3.2:88602810-88602829 | None:intergenic | 25.0% |
| !! | CCTCTAAAAAAAAAGTTCAA+CGG | + | chr3.2:88605373-88605392 | MS.gene40236:intron | 25.0% |
| !! | GCAAAATAGTGAATTTTCAT+CGG | + | chr3.2:88605425-88605444 | MS.gene40236:intron | 25.0% |
| !! | TATGTTGTTTGTTCATGATT+CGG | - | chr3.2:88604291-88604310 | None:intergenic | 25.0% |
| !! | TGTTTCTGAACTAAAACAAA+AGG | - | chr3.2:88604394-88604413 | None:intergenic | 25.0% |
| !! | TTATGAGAGAGATATTTCTA+AGG | + | chr3.2:88603641-88603660 | MS.gene40236:CDS | 25.0% |
| !! | TTTTACAATCAAAGCAAAAC+TGG | + | chr3.2:88603218-88603237 | MS.gene40236:intron | 25.0% |
| !! | TTTTGAATGAATTGAGTTTG+TGG | - | chr3.2:88603031-88603050 | None:intergenic | 25.0% |
| !!! | CGTTGAACTTTTTTTTTAGA+GGG | - | chr3.2:88605375-88605394 | None:intergenic | 25.0% |
| !!! | TAATCGTTAGAAAGGTATTA+AGG | - | chr3.2:88602456-88602475 | None:intergenic | 25.0% |
| !!! | TAATTTTTGTTTACACACCA+AGG | + | chr3.2:88605535-88605554 | MS.gene40236:intron | 25.0% |
| AAAAGTCCAAATGAGCTTAT+AGG | + | chr3.2:88605194-88605213 | MS.gene40236:intron | 30.0% | |
| AATATCTCTCTCATAAAGCT+TGG | - | chr3.2:88603637-88603656 | None:intergenic | 30.0% | |
| ACATCACACCACTATTATAA+GGG | - | chr3.2:88605404-88605423 | None:intergenic | 30.0% | |
| ACTAATGCAATGCATAATGT+TGG | + | chr3.2:88602567-88602586 | MS.gene40236:intron | 30.0% | |
| ATTATGGTTAATGGTCTCAT+TGG | + | chr3.2:88602212-88602231 | MS.gene40236:CDS | 30.0% | |
| CAAGGTTCTTTAATCATTAG+AGG | - | chr3.2:88605649-88605668 | None:intergenic | 30.0% | |
| CACTTGATCATTATGGTTAA+TGG | + | chr3.2:88602203-88602222 | MS.gene40236:CDS | 30.0% | |
| GGTATTAAGGAAGAAAAAGA+AGG | - | chr3.2:88602443-88602462 | None:intergenic | 30.0% | |
| GTCATAACGAATATTTGCAT+AGG | - | chr3.2:88604366-88604385 | None:intergenic | 30.0% | |
| GTTATTGGGGGTAATTAAAT+AGG | + | chr3.2:88603953-88603972 | MS.gene40236:intron | 30.0% | |
| TAAAGGGAGAAAATGTTCTA+AGG | + | chr3.2:88605091-88605110 | MS.gene40236:intron | 30.0% | |
| TAACTGATATAACCTGAGAA+AGG | - | chr3.2:88603536-88603555 | None:intergenic | 30.0% | |
| TATGTCATACTAATCTGTGT+TGG | + | chr3.2:88604007-88604026 | MS.gene40236:intron | 30.0% | |
| TCAAGGCTAAATATTAATCG+TGG | - | chr3.2:88602925-88602944 | None:intergenic | 30.0% | |
| TCTAACATGACATTCTTGAT+TGG | - | chr3.2:88603706-88603725 | None:intergenic | 30.0% | |
| TCTTCAACATTGACATTTGA+CGG | + | chr3.2:88603296-88603315 | MS.gene40236:CDS | 30.0% | |
| TTAAGGAAGAAAAAGAAGGA+AGG | - | chr3.2:88602439-88602458 | None:intergenic | 30.0% | |
| TTCTCACATGTTAACAAAGT+GGG | - | chr3.2:88604821-88604840 | None:intergenic | 30.0% | |
| TTTATAGCTCATTCTTTAGG+TGG | + | chr3.2:88603588-88603607 | MS.gene40236:CDS | 30.0% | |
| TTTCTCACATGTTAACAAAG+TGG | - | chr3.2:88604822-88604841 | None:intergenic | 30.0% | |
| ! | AAAGCTTCATAACATGGTTT+TGG | + | chr3.2:88604032-88604051 | MS.gene40236:intron | 30.0% |
| ! | AATGAAATTTTCCGAACACT+TGG | - | chr3.2:88603570-88603589 | None:intergenic | 30.0% |
| ! | ATACTTTTGCGAGATCAAAT+GGG | + | chr3.2:88604877-88604896 | MS.gene40236:intron | 30.0% |
| ! | ATGAAATTTTCCGAACACTT+GGG | - | chr3.2:88603569-88603588 | None:intergenic | 30.0% |
| ! | ATTTCTAAGGAACTATCTCA+GGG | + | chr3.2:88603654-88603673 | MS.gene40236:CDS | 30.0% |
| ! | TATATGCCCCAAAATTTGTT+GGG | - | chr3.2:88602708-88602727 | None:intergenic | 30.0% |
| ! | TATTTCTAAGGAACTATCTC+AGG | + | chr3.2:88603653-88603672 | MS.gene40236:CDS | 30.0% |
| ! | TTTGGAACTTCACATACTTT+AGG | + | chr3.2:88604050-88604069 | MS.gene40236:intron | 30.0% |
| ! | TTTTCCAATTCAAGGAACAT+GGG | - | chr3.2:88605592-88605611 | None:intergenic | 30.0% |
| !! | AAATGTTCTAAGGTCTAGTT+TGG | + | chr3.2:88605101-88605120 | MS.gene40236:intron | 30.0% |
| !! | AATTACATTGTTTCTGCCTT+TGG | + | chr3.2:88605710-88605729 | MS.gene40236:intron | 30.0% |
| !! | ATTCTGAAACAACCAAACTT+GGG | - | chr3.2:88602110-88602129 | None:intergenic | 30.0% |
| !! | TGATTTTCACAACTTGCTTA+TGG | + | chr3.2:88604257-88604276 | MS.gene40236:intron | 30.0% |
| !! | TTTTTCCACTTTTGCTTTCA+TGG | - | chr3.2:88604903-88604922 | None:intergenic | 30.0% |
| !!! | AAGCACCTATTTTTAACTGA+TGG | + | chr3.2:88604147-88604166 | MS.gene40236:CDS | 30.0% |
| !!! | CCGTTGAACTTTTTTTTTAG+AGG | - | chr3.2:88605376-88605395 | None:intergenic | 30.0% |
| !!! | CTTGTCTCTGAGATTTATTT+TGG | + | chr3.2:88603174-88603193 | MS.gene40236:intron | 30.0% |
| !!! | GATTTTTTTTACAGTTAGCG+AGG | + | chr3.2:88603146-88603165 | MS.gene40236:intron | 30.0% |
| !!! | TCTCGTGTCTTTTAAAATGT+CGG | - | chr3.2:88604619-88604638 | None:intergenic | 30.0% |
| AAGTTGAAATTCCCCAAGTT+TGG | + | chr3.2:88602095-88602114 | MS.gene40236:CDS | 35.0% | |
| AATCCAACATGATGCTAAAG+GGG | + | chr3.2:88602127-88602146 | MS.gene40236:CDS | 35.0% | |
| AATTCTCCATCTTCAACCAA+AGG | - | chr3.2:88605729-88605748 | None:intergenic | 35.0% | |
| ACCATAATGATCAAGTGAGT+AGG | - | chr3.2:88602200-88602219 | None:intergenic | 35.0% | |
| AGAATCCAACATGATGCTAA+AGG | + | chr3.2:88602125-88602144 | MS.gene40236:CDS | 35.0% | |
| AGTGAATCCAATGTTAGTAG+TGG | + | chr3.2:88604704-88604723 | MS.gene40236:CDS | 35.0% | |
| AGTGTAATCAGCCATAGTAA+AGG | - | chr3.2:88603920-88603939 | None:intergenic | 35.0% | |
| ATATAACCTGAGAAAGGAGA+TGG | - | chr3.2:88603530-88603549 | None:intergenic | 35.0% | |
| ATTGAAGTTGTTGATGCTTC+TGG | + | chr3.2:88602161-88602180 | MS.gene40236:CDS | 35.0% | |
| CACATCACACCACTATTATA+AGG | - | chr3.2:88605405-88605424 | None:intergenic | 35.0% | |
| CCATAATGATCAAGTGAGTA+GGG | - | chr3.2:88602199-88602218 | None:intergenic | 35.0% | |
| CTACTAACATTGGATTCACT+TGG | - | chr3.2:88604704-88604723 | None:intergenic | 35.0% | |
| CTATATGCCCCAAAATTTGT+TGG | - | chr3.2:88602709-88602728 | None:intergenic | 35.0% | |
| CTGCAAAGCAATTTCTCAAA+AGG | + | chr3.2:88602366-88602385 | MS.gene40236:CDS | 35.0% | |
| CTTATAATAGTGGTGTGATG+TGG | + | chr3.2:88605403-88605422 | MS.gene40236:intron | 35.0% | |
| GAATCCAACATGATGCTAAA+GGG | + | chr3.2:88602126-88602145 | MS.gene40236:CDS | 35.0% | |
| GAGTGAAATCCACATAACAA+AGG | - | chr3.2:88604078-88604097 | None:intergenic | 35.0% | |
| GATGCAAAAACTCCAAATTC+TGG | - | chr3.2:88602903-88602922 | None:intergenic | 35.0% | |
| GTCTCTACATTTACAATGTG+TGG | - | chr3.2:88604647-88604666 | None:intergenic | 35.0% | |
| GTTATGTGGATTTCACTCTT+TGG | + | chr3.2:88604080-88604099 | MS.gene40236:CDS | 35.0% | |
| TATTACAAAGGGTGAAACCT+TGG | + | chr3.2:88602751-88602770 | MS.gene40236:intron | 35.0% | |
| TCATGTAAACTTACAGACAG+TGG | - | chr3.2:88604444-88604463 | None:intergenic | 35.0% | |
| TGAACACCTATAAGCTCATT+TGG | - | chr3.2:88605203-88605222 | None:intergenic | 35.0% | |
| TGCTACAAGTGATGGTTATT+GGG | + | chr3.2:88603939-88603958 | MS.gene40236:intron | 35.0% | |
| TGTATTGCAGTGCTCATAAT+TGG | + | chr3.2:88602336-88602355 | MS.gene40236:intron | 35.0% | |
| TTGGTGAAAGCTTCATAACA+TGG | + | chr3.2:88604026-88604045 | MS.gene40236:intron | 35.0% | |
| TTTGAATCTGTGTCTGTCTT+AGG | + | chr3.2:88603446-88603465 | MS.gene40236:intron | 35.0% | |
| ! | ACCTTCGAAGTCAATTTTAC+CGG | - | chr3.2:88604732-88604751 | None:intergenic | 35.0% |
| ! | AGTGCTTATCTTTTGAGCTT+TGG | - | chr3.2:88604852-88604871 | None:intergenic | 35.0% |
| ! | CAGTTGTCTTTTTCTCTTGA+GGG | + | chr3.2:88605023-88605042 | MS.gene40236:intron | 35.0% |
| ! | CATACTTTTGCGAGATCAAA+TGG | + | chr3.2:88604876-88604895 | MS.gene40236:intron | 35.0% |
| ! | CTTTAGGTACCTTTGTTATG+TGG | + | chr3.2:88604066-88604085 | MS.gene40236:intron | 35.0% |
| ! | CTTTTCCAATTCAAGGAACA+TGG | - | chr3.2:88605593-88605612 | None:intergenic | 35.0% |
| ! | GCATAAGCAGGTAATTCTTT+TGG | + | chr3.2:88603803-88603822 | MS.gene40236:intron | 35.0% |
| ! | TACAGACAGTGGACTTTAAT+TGG | - | chr3.2:88604433-88604452 | None:intergenic | 35.0% |
| ! | TCAGTTGTCTTTTTCTCTTG+AGG | + | chr3.2:88605022-88605041 | MS.gene40236:intron | 35.0% |
| ! | TTGTGGTCCCAACAAATTTT+GGG | + | chr3.2:88602698-88602717 | MS.gene40236:intron | 35.0% |
| ! | TTTCTAAGGAACTATCTCAG+GGG | + | chr3.2:88603655-88603674 | MS.gene40236:CDS | 35.0% |
| !! | AAGGAAGGTGTTAGGATTTA+AGG | - | chr3.2:88602424-88602443 | None:intergenic | 35.0% |
| !! | AGAAAAAGAAGGAAGGTGTT+AGG | - | chr3.2:88602432-88602451 | None:intergenic | 35.0% |
| !! | AGGAAGGTGTTAGGATTTAA+GGG | - | chr3.2:88602423-88602442 | None:intergenic | 35.0% |
| !! | ATTATGCAGGCTTGTTTTCA+AGG | - | chr3.2:88605667-88605686 | None:intergenic | 35.0% |
| !! | ATTTGACGGTGTTGATGTAA+CGG | + | chr3.2:88603310-88603329 | MS.gene40236:CDS | 35.0% |
| !! | GATTCTGAAACAACCAAACT+TGG | - | chr3.2:88602111-88602130 | None:intergenic | 35.0% |
| !! | TTCTGAAACAACCAAACTTG+GGG | - | chr3.2:88602109-88602128 | None:intergenic | 35.0% |
| !!! | TTTTTTCCATCTCCTTTCTC+AGG | + | chr3.2:88603521-88603540 | MS.gene40236:intron | 35.0% |
| AAACAGCATCTCGTCTTTCA+CGG | + | chr3.2:88604106-88604125 | MS.gene40236:CDS | 40.0% | |
| AACAACGCTATGTTGAACCT+TGG | - | chr3.2:88602030-88602049 | None:intergenic | 40.0% | |
| AACGGGAAATAGATTAGCAG+AGG | + | chr3.2:88603328-88603347 | MS.gene40236:CDS | 40.0% | |
| ACAACGCTATGTTGAACCTT+GGG | - | chr3.2:88602029-88602048 | None:intergenic | 40.0% | |
| ACATAGAGACAGGTGAAACT+AGG | - | chr3.2:88602677-88602696 | None:intergenic | 40.0% | |
| AGGCCTAACAACAGTGAATT+GGG | + | chr3.2:88605825-88605844 | MS.gene40236:CDS | 40.0% | |
| ATCATTAGAGGATACACACG+AGG | - | chr3.2:88605637-88605656 | None:intergenic | 40.0% | |
| ATTGCACTCGCAGTTCATAT+TGG | + | chr3.2:88603398-88603417 | MS.gene40236:intron | 40.0% | |
| CCCTACTCACTTGATCATTA+TGG | + | chr3.2:88602196-88602215 | MS.gene40236:CDS | 40.0% | |
| CCTAAATAGAGCTAGTTGGA+TGG | + | chr3.2:88604475-88604494 | MS.gene40236:intron | 40.0% | |
| CGGACATACCCTTATAATAG+TGG | + | chr3.2:88605393-88605412 | MS.gene40236:intron | 40.0% | |
| CTACAAGTGATGGTTATTGG+GGG | + | chr3.2:88603941-88603960 | MS.gene40236:intron | 40.0% | |
| CTGCTACAAGTGATGGTTAT+TGG | + | chr3.2:88603938-88603957 | MS.gene40236:intron | 40.0% | |
| GACTCCTAAATAGAGCTAGT+TGG | + | chr3.2:88604471-88604490 | MS.gene40236:intron | 40.0% | |
| GATCCCAATTCACTGTTGTT+AGG | - | chr3.2:88605831-88605850 | None:intergenic | 40.0% | |
| GATGGAGCACATCATCTATA+AGG | + | chr3.2:88604493-88604512 | MS.gene40236:CDS | 40.0% | |
| GATTACACTGCTACAAGTGA+TGG | + | chr3.2:88603931-88603950 | MS.gene40236:intron | 40.0% | |
| GCAATGACTAGGTGTTTGTT+TGG | - | chr3.2:88603075-88603094 | None:intergenic | 40.0% | |
| GCAGATAATGTGCATTATGC+AGG | - | chr3.2:88605680-88605699 | None:intergenic | 40.0% | |
| GCTACAAGTGATGGTTATTG+GGG | + | chr3.2:88603940-88603959 | MS.gene40236:intron | 40.0% | |
| TCACGGTTTCTTGGTAAAAC+AGG | + | chr3.2:88604123-88604142 | MS.gene40236:CDS | 40.0% | |
| TCTCGCACATAATGCAATTC+AGG | + | chr3.2:88605888-88605907 | MS.gene40236:CDS | 40.0% | |
| TGAAGGAAAAATTGCAGGAC+TGG | + | chr3.2:88603731-88603750 | MS.gene40236:CDS | 40.0% | |
| TTACACACCAAGGTGTAATG+TGG | + | chr3.2:88605545-88605564 | MS.gene40236:intron | 40.0% | |
| TTCTCTTCAGGTCTGCTTTA+CGG | + | chr3.2:88604321-88604340 | MS.gene40236:intron | 40.0% | |
| TTGACCCATGTTCCTTGAAT+TGG | + | chr3.2:88605585-88605604 | MS.gene40236:intron | 40.0% | |
| TTTCTGCCTTTGGTTGAAGA+TGG | + | chr3.2:88605720-88605739 | MS.gene40236:intron | 40.0% | |
| ! | AAATTTTCCGAACACTTGGG+TGG | - | chr3.2:88603566-88603585 | None:intergenic | 40.0% |
| ! | AGTGAATTTTCATCGGACGT+TGG | + | chr3.2:88605432-88605451 | MS.gene40236:intron | 40.0% |
| ! | ATCACGGTGCATGAGTTTTA+CGG | - | chr3.2:88604545-88604564 | None:intergenic | 40.0% |
| ! | CTTGTGGTCCCAACAAATTT+TGG | + | chr3.2:88602697-88602716 | MS.gene40236:intron | 40.0% |
| ! | TCCGGTAAAATTGACTTCGA+AGG | + | chr3.2:88604728-88604747 | MS.gene40236:CDS | 40.0% |
| ! | TGAGTTTTACGGTCTACCTT+TGG | - | chr3.2:88604534-88604553 | None:intergenic | 40.0% |
| ! | TGTGGTCCCAACAAATTTTG+GGG | + | chr3.2:88602699-88602718 | MS.gene40236:intron | 40.0% |
| !! | CCATCCAACTAGCTCTATTT+AGG | - | chr3.2:88604478-88604497 | None:intergenic | 40.0% |
| !! | TCCAATGTTAGTAGTGGATC+CGG | + | chr3.2:88604710-88604729 | MS.gene40236:CDS | 40.0% |
| !! | TTTGACGGTGTTGATGTAAC+GGG | + | chr3.2:88603311-88603330 | MS.gene40236:CDS | 40.0% |
| !!! | TGCATTGCTATTTTGCATGC+AGG | + | chr3.2:88603260-88603279 | MS.gene40236:intron | 40.0% |
| AAGGTGTAATGTGGTACCTC+TGG | + | chr3.2:88605554-88605573 | MS.gene40236:intron | 45.0% | |
| ACCGGATCCACTACTAACAT+TGG | - | chr3.2:88604714-88604733 | None:intergenic | 45.0% | |
| AGGTGTAATGTGGTACCTCT+GGG | + | chr3.2:88605555-88605574 | MS.gene40236:intron | 45.0% | |
| AGTGATGACAATACTCGCAG+AGG | + | chr3.2:88605792-88605811 | MS.gene40236:intron | 45.0% | |
| ATGGGCCATGAAAGCAAAAG+TGG | + | chr3.2:88604895-88604914 | MS.gene40236:intron | 45.0% | |
| CAACATGATGCTAAAGGGGA+TGG | + | chr3.2:88602131-88602150 | MS.gene40236:CDS | 45.0% | |
| CATCCCCTTTAGCATCATGT+TGG | - | chr3.2:88602133-88602152 | None:intergenic | 45.0% | |
| GAGGCCTAACAACAGTGAAT+TGG | + | chr3.2:88605824-88605843 | MS.gene40236:CDS | 45.0% | |
| GATTCACTTGGAACTTCCTC+TGG | - | chr3.2:88604692-88604711 | None:intergenic | 45.0% | |
| GGAATCACAACAGATACCCA+AGG | + | chr3.2:88602010-88602029 | MS.gene40236:CDS | 45.0% | |
| GGGAAATAGATTAGCAGAGG+AGG | + | chr3.2:88603331-88603350 | MS.gene40236:CDS | 45.0% | |
| TAAAACGCCACCCAAGTGTT+CGG | + | chr3.2:88603556-88603575 | MS.gene40236:CDS | 45.0% | |
| TCACCTGTCTCTATGTCTTG+TGG | + | chr3.2:88602681-88602700 | MS.gene40236:intron | 45.0% | |
| TCTCGTCTTTCACGGTTTCT+TGG | + | chr3.2:88604114-88604133 | MS.gene40236:CDS | 45.0% | |
| TGGGGCATATAGTTCTTGCT+TGG | + | chr3.2:88602717-88602736 | MS.gene40236:intron | 45.0% | |
| TGGTTAATGGTCTCATTGGC+AGG | + | chr3.2:88602216-88602235 | MS.gene40236:CDS | 45.0% | |
| TTGGTTGGCAAGTGTATGCT+TGG | + | chr3.2:88602782-88602801 | MS.gene40236:intron | 45.0% | |
| ! | CTTTAGGTGGCTTGATAGCA+AGG | + | chr3.2:88603601-88603620 | MS.gene40236:CDS | 45.0% |
| ! | GAGGAGGTGTGTGATTTCTT+TGG | + | chr3.2:88603347-88603366 | MS.gene40236:intron | 45.0% |
| ! | TGGAACTTCCTCTGGAAGAA+CGG | - | chr3.2:88604684-88604703 | None:intergenic | 45.0% |
| !! | AGAGGTACCACATTACACCT+TGG | - | chr3.2:88605555-88605574 | None:intergenic | 45.0% |
| ACCATCTGGAGAAGAAGAGG+AGG | - | chr3.2:88604186-88604205 | None:intergenic | 50.0% | |
| ACCTCCTCTTCTTCTCCAGA+TGG | + | chr3.2:88604182-88604201 | MS.gene40236:CDS | 50.0% | |
| ACGTCAGCTTCAGTGGTAGT+AGG | + | chr3.2:88605857-88605876 | MS.gene40236:CDS | 50.0% | |
| ATAGGCAACGCGACGTTTGA+AGG | - | chr3.2:88604348-88604367 | None:intergenic | 50.0% | |
| CGAACCATCTGGAGAAGAAG+AGG | - | chr3.2:88604189-88604208 | None:intergenic | 50.0% | |
| CGAATTGACGTCAGCTTCAG+TGG | + | chr3.2:88605850-88605869 | MS.gene40236:CDS | 50.0% | |
| CTCGCAGAGGAAATGATCAG+AGG | + | chr3.2:88605805-88605824 | MS.gene40236:intron | 50.0% | |
| GCGTAGAAACGAGCTTCCAA+AGG | + | chr3.2:88604515-88604534 | MS.gene40236:CDS | 50.0% | |
| GCTTATGCCCTCTACAACCA+AGG | - | chr3.2:88603791-88603810 | None:intergenic | 50.0% | |
| GGACCACAAGACATAGAGAC+AGG | - | chr3.2:88602687-88602706 | None:intergenic | 50.0% | |
| GGTGTAATGTGGTACCTCTG+GGG | + | chr3.2:88605556-88605575 | MS.gene40236:intron | 50.0% | |
| GTGTAATGTGGTACCTCTGG+GGG | + | chr3.2:88605557-88605576 | MS.gene40236:intron | 50.0% | |
| TGGGTCAAATATTCCCCCAG+AGG | - | chr3.2:88605573-88605592 | None:intergenic | 50.0% | |
| ! | TCCTCTGGAAGAACGGAAGT+GGG | - | chr3.2:88604677-88604696 | None:intergenic | 50.0% |
| ! | TGGTTGTAGAGGGCATAAGC+AGG | + | chr3.2:88603791-88603810 | MS.gene40236:CDS | 50.0% |
| ! | TTCCTCTGGAAGAACGGAAG+TGG | - | chr3.2:88604678-88604697 | None:intergenic | 50.0% |
| !! | TGAAACCTTGGTGCTGTGGT+TGG | + | chr3.2:88602763-88602782 | MS.gene40236:intron | 50.0% |
| ACCCACTTCCGTTCTTCCAG+AGG | + | chr3.2:88604673-88604692 | MS.gene40236:CDS | 55.0% | |
| CTTCGGAGTCACGAACCATC+TGG | - | chr3.2:88604200-88604219 | None:intergenic | 55.0% | |
| TGCCCTCTACAACCAAGGTG+CGG | - | chr3.2:88603786-88603805 | None:intergenic | 55.0% | |
| !! | ACCTTGGTGCTGTGGTTGGT+TGG | + | chr3.2:88602767-88602786 | MS.gene40236:intron | 55.0% |
| !! | AGGGTGAAACCTTGGTGCTG+TGG | + | chr3.2:88602759-88602778 | MS.gene40236:intron | 55.0% |
| ACGCCGCACCTTGGTTGTAG+AGG | + | chr3.2:88603780-88603799 | MS.gene40236:CDS | 60.0% | |
| CGCCGCACCTTGGTTGTAGA+GGG | + | chr3.2:88603781-88603800 | MS.gene40236:CDS | 60.0% | |
| GCCAACCAACCACAGCACCA+AGG | - | chr3.2:88602771-88602790 | None:intergenic | 60.0% | |
| ACGTCTGCAACGCCGCACCT+TGG | + | chr3.2:88603771-88603790 | MS.gene40236:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 88602008 | 88605918 | 88602008 | ID=MS.gene40236 |
| chr3.2 | mRNA | 88602008 | 88605918 | 88602008 | ID=MS.gene40236.t1;Parent=MS.gene40236 |
| chr3.2 | exon | 88602008 | 88602237 | 88602008 | ID=MS.gene40236.t1.exon1;Parent=MS.gene40236.t1 |
| chr3.2 | CDS | 88602008 | 88602237 | 88602008 | ID=cds.MS.gene40236.t1;Parent=MS.gene40236.t1 |
| chr3.2 | exon | 88602346 | 88602413 | 88602346 | ID=MS.gene40236.t1.exon2;Parent=MS.gene40236.t1 |
| chr3.2 | CDS | 88602346 | 88602413 | 88602346 | ID=cds.MS.gene40236.t1;Parent=MS.gene40236.t1 |
| chr3.2 | exon | 88603282 | 88603352 | 88603282 | ID=MS.gene40236.t1.exon3;Parent=MS.gene40236.t1 |
| chr3.2 | CDS | 88603282 | 88603352 | 88603282 | ID=cds.MS.gene40236.t1;Parent=MS.gene40236.t1 |
| chr3.2 | exon | 88603543 | 88603812 | 88603543 | ID=MS.gene40236.t1.exon4;Parent=MS.gene40236.t1 |
| chr3.2 | CDS | 88603543 | 88603812 | 88603543 | ID=cds.MS.gene40236.t1;Parent=MS.gene40236.t1 |
| chr3.2 | exon | 88604072 | 88604232 | 88604072 | ID=MS.gene40236.t1.exon5;Parent=MS.gene40236.t1 |
| chr3.2 | CDS | 88604072 | 88604232 | 88604072 | ID=cds.MS.gene40236.t1;Parent=MS.gene40236.t1 |
| chr3.2 | exon | 88604331 | 88604386 | 88604331 | ID=MS.gene40236.t1.exon6;Parent=MS.gene40236.t1 |
| chr3.2 | CDS | 88604331 | 88604386 | 88604331 | ID=cds.MS.gene40236.t1;Parent=MS.gene40236.t1 |
| chr3.2 | exon | 88604484 | 88604536 | 88604484 | ID=MS.gene40236.t1.exon7;Parent=MS.gene40236.t1 |
| chr3.2 | CDS | 88604484 | 88604536 | 88604484 | ID=cds.MS.gene40236.t1;Parent=MS.gene40236.t1 |
| chr3.2 | exon | 88604614 | 88604749 | 88604614 | ID=MS.gene40236.t1.exon8;Parent=MS.gene40236.t1 |
| chr3.2 | CDS | 88604614 | 88604749 | 88604614 | ID=cds.MS.gene40236.t1;Parent=MS.gene40236.t1 |
| chr3.2 | exon | 88605812 | 88605918 | 88605812 | ID=MS.gene40236.t1.exon9;Parent=MS.gene40236.t1 |
| chr3.2 | CDS | 88605812 | 88605918 | 88605812 | ID=cds.MS.gene40236.t1;Parent=MS.gene40236.t1 |
| Gene Sequence |
| Protein sequence |
