Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013085.t1 | XP_003602901.2 | 96.6 | 963 | 33 | 0 | 1 | 963 | 1 | 963 | 0.00E+00 | 1493.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013085.t1 | P0DMS1 | 42.0 | 979 | 486 | 20 | 1 | 947 | 1 | 929 | 3.5e-172 | 607.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013085.t1 | G7J527 | 95.6 | 945 | 40 | 1 | 21 | 963 | 16 | 960 | 0.0e+00 | 1429.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene070686 | MS.gene013085 | PPI |
| MS.gene013085 | MS.gene046432 | PPI |
| MS.gene069111 | MS.gene013085 | PPI |
| MS.gene027791 | MS.gene013085 | PPI |
| MS.gene013085 | MS.gene048346 | PPI |
| MS.gene065209 | MS.gene013085 | PPI |
| MS.gene013085 | MS.gene008915 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013085.t1 | MTR_3g100190 | 96.296 | 945 | 33 | 1 | 21 | 963 | 16 | 960 | 0.0 | 1842 |
| MS.gene013085.t1 | MTR_5g066340 | 56.873 | 1004 | 368 | 19 | 1 | 963 | 1 | 980 | 0.0 | 1021 |
| MS.gene013085.t1 | MTR_8g471130 | 45.009 | 551 | 266 | 13 | 1 | 526 | 1 | 539 | 9.49e-131 | 419 |
| MS.gene013085.t1 | MTR_5g032060 | 47.269 | 476 | 231 | 6 | 1 | 470 | 1 | 462 | 6.63e-124 | 405 |
| MS.gene013085.t1 | MTR_5g032060 | 34.917 | 421 | 213 | 12 | 546 | 952 | 769 | 1142 | 7.59e-61 | 226 |
| MS.gene013085.t1 | MTR_1g103160 | 32.113 | 355 | 200 | 8 | 1 | 343 | 1 | 326 | 2.91e-38 | 156 |
| MS.gene013085.t1 | MTR_1g103160 | 32.113 | 355 | 200 | 8 | 1 | 343 | 4 | 329 | 3.32e-38 | 155 |
| MS.gene013085.t1 | MTR_1g071540 | 33.069 | 378 | 178 | 13 | 10 | 340 | 15 | 364 | 5.03e-36 | 149 |
| MS.gene013085.t1 | MTR_7g095410 | 58.333 | 96 | 40 | 0 | 10 | 105 | 13 | 108 | 9.64e-32 | 135 |
| MS.gene013085.t1 | MTR_7g095410 | 58.333 | 96 | 40 | 0 | 10 | 105 | 13 | 108 | 1.03e-31 | 135 |
| MS.gene013085.t1 | MTR_5g006520 | 31.273 | 275 | 138 | 5 | 10 | 276 | 13 | 244 | 3.39e-30 | 130 |
| MS.gene013085.t1 | MTR_5g006520 | 43.662 | 142 | 69 | 2 | 10 | 151 | 13 | 143 | 6.18e-30 | 129 |
| MS.gene013085.t1 | MTR_5g075490 | 52.747 | 91 | 43 | 0 | 1 | 91 | 12 | 102 | 2.84e-26 | 115 |
| MS.gene013085.t1 | MTR_1g103160 | 30.031 | 323 | 185 | 8 | 33 | 343 | 1 | 294 | 2.09e-25 | 114 |
| MS.gene013085.t1 | MTR_7g095410 | 56.164 | 73 | 32 | 0 | 33 | 105 | 1 | 73 | 1.64e-19 | 95.5 |
| MS.gene013085.t1 | MTR_7g108070 | 50.000 | 78 | 36 | 2 | 12 | 86 | 11 | 88 | 1.73e-19 | 90.9 |
| MS.gene013085.t1 | MTR_1g088965 | 45.570 | 79 | 42 | 1 | 12 | 89 | 17 | 95 | 1.75e-17 | 87.0 |
| MS.gene013085.t1 | MTR_3g467610 | 62.069 | 58 | 22 | 0 | 33 | 90 | 15 | 72 | 4.86e-17 | 85.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013085.t1 | AT1G58215 | 45.510 | 991 | 448 | 23 | 1 | 953 | 1 | 937 | 0.0 | 744 |
| MS.gene013085.t1 | AT1G09720 | 42.381 | 991 | 473 | 27 | 1 | 962 | 1 | 922 | 0.0 | 661 |
| MS.gene013085.t1 | AT5G10500 | 40.506 | 632 | 315 | 18 | 1 | 618 | 1 | 585 | 7.39e-124 | 397 |
| MS.gene013085.t1 | AT5G10500 | 37.615 | 218 | 132 | 2 | 734 | 950 | 627 | 841 | 1.02e-40 | 162 |
| MS.gene013085.t1 | AT2G22560 | 34.783 | 391 | 187 | 6 | 568 | 951 | 613 | 942 | 7.01e-63 | 231 |
| MS.gene013085.t1 | AT3G22790 | 34.576 | 295 | 144 | 9 | 10 | 300 | 13 | 262 | 6.96e-35 | 145 |
| MS.gene013085.t1 | AT3G22790 | 34.576 | 295 | 144 | 9 | 10 | 300 | 13 | 262 | 6.96e-35 | 145 |
| MS.gene013085.t1 | AT3G22790 | 34.576 | 295 | 144 | 9 | 10 | 300 | 13 | 262 | 6.96e-35 | 145 |
| MS.gene013085.t1 | AT4G02710 | 30.795 | 302 | 176 | 6 | 10 | 291 | 13 | 301 | 4.37e-32 | 135 |
| MS.gene013085.t1 | AT1G03080 | 33.221 | 298 | 149 | 10 | 10 | 278 | 12 | 288 | 7.15e-32 | 135 |
| MS.gene013085.t1 | AT1G03080 | 33.221 | 298 | 149 | 10 | 10 | 278 | 12 | 288 | 7.15e-32 | 135 |
| MS.gene013085.t1 | AT1G03080 | 33.221 | 298 | 149 | 10 | 10 | 278 | 12 | 288 | 7.15e-32 | 135 |
| MS.gene013085.t1 | AT4G14760 | 33.333 | 261 | 128 | 5 | 10 | 270 | 13 | 227 | 7.54e-32 | 135 |
| MS.gene013085.t1 | AT4G14760 | 33.333 | 261 | 128 | 5 | 10 | 270 | 13 | 227 | 7.54e-32 | 135 |
| MS.gene013085.t1 | AT4G14760 | 33.333 | 261 | 128 | 5 | 10 | 270 | 13 | 227 | 7.54e-32 | 135 |
| MS.gene013085.t1 | AT4G14760 | 33.333 | 261 | 128 | 5 | 10 | 270 | 13 | 227 | 7.54e-32 | 135 |
| MS.gene013085.t1 | AT2G30500 | 52.809 | 89 | 42 | 0 | 3 | 91 | 14 | 102 | 4.87e-24 | 107 |
| MS.gene013085.t1 | AT2G30500 | 52.809 | 89 | 42 | 0 | 3 | 91 | 14 | 102 | 4.87e-24 | 107 |
| MS.gene013085.t1 | AT2G30500 | 52.809 | 89 | 42 | 0 | 3 | 91 | 13 | 101 | 5.05e-24 | 107 |
| MS.gene013085.t1 | AT5G58320 | 48.913 | 92 | 47 | 0 | 3 | 94 | 14 | 105 | 1.38e-22 | 103 |
| MS.gene013085.t1 | AT5G58320 | 48.913 | 92 | 47 | 0 | 3 | 94 | 14 | 105 | 1.38e-22 | 103 |
| MS.gene013085.t1 | AT5G58320 | 48.913 | 92 | 47 | 0 | 3 | 94 | 14 | 105 | 1.50e-22 | 103 |
| MS.gene013085.t1 | AT5G58320 | 48.913 | 92 | 47 | 0 | 3 | 94 | 14 | 105 | 1.50e-22 | 103 |
| MS.gene013085.t1 | AT2G47920 | 46.809 | 94 | 47 | 2 | 12 | 104 | 10 | 101 | 5.43e-22 | 96.3 |
| MS.gene013085.t1 | AT2G47920 | 46.809 | 94 | 47 | 2 | 12 | 104 | 10 | 101 | 5.43e-22 | 96.3 |
| MS.gene013085.t1 | AT1G03470 | 53.947 | 76 | 34 | 1 | 12 | 86 | 8 | 83 | 9.85e-21 | 93.6 |
| MS.gene013085.t1 | AT1G03470 | 53.947 | 76 | 34 | 1 | 12 | 86 | 8 | 83 | 9.85e-21 | 93.6 |
| MS.gene013085.t1 | AT1G03470 | 53.947 | 76 | 34 | 1 | 12 | 86 | 8 | 83 | 9.85e-21 | 93.6 |
| MS.gene013085.t1 | AT1G03470 | 53.947 | 76 | 34 | 1 | 12 | 86 | 8 | 83 | 9.85e-21 | 93.6 |
| MS.gene013085.t1 | AT5G58320 | 48.387 | 62 | 32 | 0 | 33 | 94 | 1 | 62 | 4.99e-12 | 69.7 |
| MS.gene013085.t1 | AT4G03153 | 39.024 | 82 | 45 | 2 | 12 | 88 | 7 | 88 | 5.13e-12 | 67.0 |
Find 140 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTACCTCTTTCAACTTATTT+AGG | 0.097951 | 3.2:+83388292 | None:intergenic |
| CAAGCTTCAGAAAGAAATTT+TGG | 0.145445 | 3.2:-83388514 | MS.gene013085:CDS |
| TTTAATCTTGAACATCTTTC+AGG | 0.163584 | 3.2:-83387733 | MS.gene013085:CDS |
| TTTGGGATACTTGGAGGTTT+AGG | 0.191977 | 3.2:+83388675 | None:intergenic |
| TTGAATCAGATGTTTGTAAA+TGG | 0.230787 | 3.2:-83387364 | MS.gene013085:CDS |
| GAAGTTCCAACAATCTTTAC+AGG | 0.233406 | 3.2:-83386544 | MS.gene013085:CDS |
| TCCACAAAATTTATCAGTTC+TGG | 0.242133 | 3.2:+83388903 | None:intergenic |
| CTTAAAATCATTGATGATAA+TGG | 0.242555 | 3.2:-83388969 | MS.gene013085:CDS |
| TACCTCTTTCAACTTATTTA+GGG | 0.249240 | 3.2:+83388293 | None:intergenic |
| TTGGGATACTTGGAGGTTTA+GGG | 0.251548 | 3.2:+83388676 | None:intergenic |
| TCTCTCAAATGTCTAAATAT+TGG | 0.252662 | 3.2:+83386432 | None:intergenic |
| TAACGACGCACGGGCTTTAA+TGG | 0.252925 | 3.2:-83388346 | MS.gene013085:CDS |
| GGAGGTAATGGATTAGTTTC+AGG | 0.253642 | 3.2:+83388735 | None:intergenic |
| ATATATGGAAACATCTATAT+TGG | 0.275428 | 3.2:+83385949 | None:intergenic |
| CCTTTGAGGTCTTTCTTATT+CGG | 0.277996 | 3.2:-83386066 | MS.gene013085:CDS |
| TTGAGGAGAATTTAGAATTC+TGG | 0.280446 | 3.2:-83386599 | MS.gene013085:CDS |
| TGTAGGTAAGGTTGTTAGTT+TGG | 0.284837 | 3.2:-83387989 | MS.gene013085:CDS |
| TACAAATTTGAAAACCTTAG+AGG | 0.285571 | 3.2:-83388213 | MS.gene013085:CDS |
| AATGAACCTCCTTAACCTTT+TGG | 0.290447 | 3.2:+83388235 | None:intergenic |
| TAAGAACTGAATTATCATTA+TGG | 0.295675 | 3.2:-83386407 | MS.gene013085:CDS |
| CCTTTCCAAGCAAACGAATC+AGG | 0.298097 | 3.2:-83388184 | MS.gene013085:CDS |
| TTAAAATCATTGATGATAAT+GGG | 0.300487 | 3.2:-83388968 | MS.gene013085:CDS |
| AGATGAGGAAGGGGAGAATT+TGG | 0.301275 | 3.2:-83387689 | MS.gene013085:CDS |
| AATCCAACAATTCAATGTTC+AGG | 0.323293 | 3.2:-83388570 | MS.gene013085:CDS |
| GAAATTGAAGACAAAGTTAC+AGG | 0.328085 | 3.2:-83388429 | MS.gene013085:CDS |
| AAACCTGAACATTGAATTGT+TGG | 0.328621 | 3.2:+83388567 | None:intergenic |
| GAAGGTTTGAGTTATGTAAA+AGG | 0.332066 | 3.2:-83386183 | MS.gene013085:CDS |
| GTTTATCTCTTCATCCTTAG+TGG | 0.332491 | 3.2:+83386929 | None:intergenic |
| TATATGGAAACATCTATATT+GGG | 0.335531 | 3.2:+83385950 | None:intergenic |
| TCAGGACAAAACAATCAAAA+TGG | 0.336738 | 3.2:-83389480 | MS.gene013085:CDS |
| ATTCTGTAATGGACTTGTTC+AGG | 0.343736 | 3.2:+83388786 | None:intergenic |
| AAAACCTTCTTTGGGATACT+TGG | 0.346431 | 3.2:+83388666 | None:intergenic |
| TGGAAAGGAAGTTACCTCTA+AGG | 0.346905 | 3.2:+83388199 | None:intergenic |
| TTAAGTCCTGTAAAGATTGT+TGG | 0.351780 | 3.2:+83386538 | None:intergenic |
| AAATTCCGCTTCGAAATTGA+TGG | 0.356675 | 3.2:-83386627 | MS.gene013085:CDS |
| GGAAAAGCTTGAGGAAGATT+CGG | 0.356754 | 3.2:-83388058 | MS.gene013085:CDS |
| TAACAAAAGGATGAAAGAAT+TGG | 0.369828 | 3.2:-83387842 | MS.gene013085:CDS |
| TAAAGTTGAATCACTTGATC+TGG | 0.371940 | 3.2:-83387416 | MS.gene013085:CDS |
| ATCTCCCTGATTCGTTTGCT+TGG | 0.373115 | 3.2:+83388179 | None:intergenic |
| ATCCGGATTTGTTTCTGAAC+TGG | 0.375791 | 3.2:+83386887 | None:intergenic |
| TCTGTTTGGTTATTAGGGTT+AGG | 0.381092 | 3.2:+83388714 | None:intergenic |
| ACGCGGTTCAAGGAGATAAC+AGG | 0.390331 | 3.2:-83386821 | MS.gene013085:CDS |
| AATATCGATATGTCATCAAT+TGG | 0.412156 | 3.2:-83386720 | MS.gene013085:CDS |
| TTATTAGGGTTAGGAGGTAA+TGG | 0.417397 | 3.2:+83388723 | None:intergenic |
| GAAAAGCTTGAGGAAGATTC+GGG | 0.417598 | 3.2:-83388057 | MS.gene013085:CDS |
| AGAAGCATACCAAAAGGTTA+AGG | 0.421409 | 3.2:-83388244 | MS.gene013085:CDS |
| AAACTGAGAAAGAGTTTGTA+AGG | 0.428032 | 3.2:-83388485 | MS.gene013085:CDS |
| GATATGCTTGAACATGATAT+AGG | 0.429964 | 3.2:-83388102 | MS.gene013085:CDS |
| CTGTATTGTCTCTGTAGTGC+TGG | 0.432223 | 3.2:+83385997 | None:intergenic |
| GCCGCGCTAGAATGCCTTTG+AGG | 0.434029 | 3.2:-83386080 | MS.gene013085:CDS |
| AGAACACAATGAAGTATTGC+AGG | 0.435549 | 3.2:-83386382 | MS.gene013085:CDS |
| TCTTGTAAGCTACACATTGA+TGG | 0.441202 | 3.2:+83386339 | None:intergenic |
| CATCAAGCTGCAAAGTTTCA+AGG | 0.443442 | 3.2:-83386258 | MS.gene013085:CDS |
| TGAAAGAGAAAAGATTATGT+TGG | 0.446928 | 3.2:-83387335 | MS.gene013085:CDS |
| GAGGTAATGGATTAGTTTCA+GGG | 0.448765 | 3.2:+83388736 | None:intergenic |
| ACAAAGCTTAGAAGAGGATA+AGG | 0.454706 | 3.2:-83387893 | MS.gene013085:CDS |
| CATCTTCGTCTATTCTGTAA+TGG | 0.454957 | 3.2:+83388775 | None:intergenic |
| CCTCTTGAAAACGCGGTTCA+AGG | 0.456072 | 3.2:-83386831 | MS.gene013085:CDS |
| TGTGCAAGATCTAACACAAC+AGG | 0.463867 | 3.2:-83387473 | MS.gene013085:CDS |
| AACAGATATGGAGGAGATAG+TGG | 0.465013 | 3.2:-83389000 | MS.gene013085:intron |
| ACCTTCTTTGGGATACTTGG+AGG | 0.469688 | 3.2:+83388669 | None:intergenic |
| ATCACTTGATCTGGAAACTA+AGG | 0.473175 | 3.2:-83387407 | MS.gene013085:CDS |
| AAGAGAAAAGATTATGTTGG+AGG | 0.476441 | 3.2:-83387332 | MS.gene013085:CDS |
| AAGAACTATAACGATGTAAC+GGG | 0.477650 | 3.2:-83387292 | MS.gene013085:CDS |
| GGTGGTGGGTTAGCCACATC+AGG | 0.479597 | 3.2:-83389498 | MS.gene013085:CDS |
| TCAATGTTCAGGTTTGAGTA+AGG | 0.483983 | 3.2:-83388559 | MS.gene013085:CDS |
| CCTGATTCGTTTGCTTGGAA+AGG | 0.489020 | 3.2:+83388184 | None:intergenic |
| GACAAAACAATCAAAATGGC+TGG | 0.492493 | 3.2:-83389476 | MS.gene013085:CDS |
| CCAATGCATATTCATGGTGG+TGG | 0.493918 | 3.2:-83389513 | MS.gene013085:CDS |
| GAAGATCGTGCTGAAAATAT+CGG | 0.494455 | 3.2:-83387559 | MS.gene013085:CDS |
| CAGCAACCAATGCATATTCA+TGG | 0.495304 | 3.2:-83389519 | MS.gene013085:CDS |
| CGAAATTGATGGTTTGCTTG+AGG | 0.497327 | 3.2:-83386616 | MS.gene013085:CDS |
| GAAGAATGTAGTTGCCACTA+AGG | 0.498077 | 3.2:-83386943 | MS.gene013085:CDS |
| ATTCAGAAAATAGTAACAAA+AGG | 0.498532 | 3.2:-83387855 | MS.gene013085:CDS |
| TAATGCTCTATATGCTCTAA+AGG | 0.501026 | 3.2:+83388875 | None:intergenic |
| AGATGATAAGTCTAGATTGA+AGG | 0.502870 | 3.2:-83387521 | MS.gene013085:CDS |
| TTTCTAACAGTGAAAGGGAA+TGG | 0.507447 | 3.2:+83386652 | None:intergenic |
| TCTATGTTGCTATCAAGAAA+AGG | 0.508385 | 3.2:-83388633 | MS.gene013085:CDS |
| AGAATTTAGAATTCTGGTTG+AGG | 0.510468 | 3.2:-83386593 | MS.gene013085:CDS |
| TGTGAAACTAGATGAGGAAG+GGG | 0.510876 | 3.2:-83387698 | MS.gene013085:CDS |
| AAGGATGAAAGAATTGGAAG+AGG | 0.511792 | 3.2:-83387836 | MS.gene013085:CDS |
| GAGATGATCGATGAGCTTGT+AGG | 0.511931 | 3.2:-83388006 | MS.gene013085:CDS |
| ACCTCCAAGTATCCCAAAGA+AGG | 0.513746 | 3.2:-83388670 | MS.gene013085:CDS |
| AACCCTAAATAAGTTGAAAG+AGG | 0.513748 | 3.2:-83388295 | MS.gene013085:CDS |
| AGCTAGAGAAGCATACCAAA+AGG | 0.514253 | 3.2:-83388250 | MS.gene013085:CDS |
| GATCGATGAGCTTGTAGGTA+AGG | 0.515149 | 3.2:-83388001 | MS.gene013085:CDS |
| GTGGTGCGAGGACTTTCATC+CGG | 0.521655 | 3.2:+83386870 | None:intergenic |
| CTTTCCAAGCAAACGAATCA+GGG | 0.523805 | 3.2:-83388183 | MS.gene013085:CDS |
| TAAGGTTGTTAGTTTGGAAA+CGG | 0.528715 | 3.2:-83387983 | MS.gene013085:CDS |
| ACGGCAGTTACTTCTCAGAA+TGG | 0.533133 | 3.2:-83387964 | MS.gene013085:CDS |
| GTACTAGCTATATCTGAAGA+TGG | 0.534842 | 3.2:+83386783 | None:intergenic |
| GTTTGGTTATTAGGGTTAGG+AGG | 0.537743 | 3.2:+83388717 | None:intergenic |
| TACCAGTTCAGAAACAAATC+CGG | 0.541447 | 3.2:-83386889 | MS.gene013085:CDS |
| GAAGAACTATAACGATGTAA+CGG | 0.541460 | 3.2:-83387293 | MS.gene013085:CDS |
| GTTTCTAGTGAACTACAAGA+AGG | 0.543650 | 3.2:-83386201 | MS.gene013085:CDS |
| AGGCATTCTAGCGCGGCTTG+TGG | 0.544301 | 3.2:+83386086 | None:intergenic |
| TGAAGAATTGAGTCAAGCAA+TGG | 0.548068 | 3.2:-83386133 | MS.gene013085:CDS |
| AGTTACTTCTCAGAATGGAT+TGG | 0.549899 | 3.2:-83387959 | MS.gene013085:CDS |
| AAAGAGCGGAAATGTACTAC+AGG | 0.550960 | 3.2:-83388932 | MS.gene013085:CDS |
| AGCAATCGTGAATGATGCTA+AGG | 0.558867 | 3.2:-83387581 | MS.gene013085:CDS |
| CATGTTGCAAGAGAGGATTA+AGG | 0.559763 | 3.2:-83388079 | MS.gene013085:CDS |
| GAAGAATTGAGTCAAGCAAT+GGG | 0.560171 | 3.2:-83386132 | MS.gene013085:CDS |
| ATATAGGCATGTTGCAAGAG+AGG | 0.570909 | 3.2:-83388086 | MS.gene013085:CDS |
| CAAATATTTAACAGATATGG+AGG | 0.572308 | 3.2:-83389009 | MS.gene013085:intron |
| ATGTGAAACTAGATGAGGAA+GGG | 0.573018 | 3.2:-83387699 | MS.gene013085:CDS |
| TATGGAGGAGATAGTGGCTG+AGG | 0.575060 | 3.2:-83388994 | MS.gene013085:CDS |
| AATGTGAAACTAGATGAGGA+AGG | 0.576478 | 3.2:-83387700 | MS.gene013085:CDS |
| CCACCACCATGAATATGCAT+TGG | 0.576750 | 3.2:+83389513 | None:intergenic |
| GAGGATTAAGGAAAAGCTTG+AGG | 0.577900 | 3.2:-83388067 | MS.gene013085:CDS |
| GAAATATGATCATCTATCAA+AGG | 0.578698 | 3.2:-83388847 | MS.gene013085:CDS |
| TTCTAATGGAAAACCAAGTG+AGG | 0.579702 | 3.2:-83387644 | MS.gene013085:CDS |
| AAATATACAAAGCTTAGAAG+AGG | 0.584471 | 3.2:-83387899 | MS.gene013085:CDS |
| CGCGGTTCAAGGAGATAACA+GGG | 0.584707 | 3.2:-83386820 | MS.gene013085:CDS |
| TAAAATCATTGATGATAATG+GGG | 0.586550 | 3.2:-83388967 | MS.gene013085:CDS |
| AGCATACCAAAAGGTTAAGG+AGG | 0.605993 | 3.2:-83388241 | MS.gene013085:CDS |
| CCGAATAAGAAAGACCTCAA+AGG | 0.612634 | 3.2:+83386066 | None:intergenic |
| CAATGCATATTCATGGTGGT+GGG | 0.614885 | 3.2:-83389512 | MS.gene013085:CDS |
| ACTTGATCTGGAAACTAAGG+AGG | 0.615217 | 3.2:-83387404 | MS.gene013085:CDS |
| TGGCTGGAACAAAGTCTCCA+AGG | 0.616166 | 3.2:-83389460 | MS.gene013085:intron |
| TTTCTTGATAGCAACATAGA+CGG | 0.618261 | 3.2:+83388636 | None:intergenic |
| ACCTCAAAGGCATTCTAGCG+CGG | 0.618902 | 3.2:+83386079 | None:intergenic |
| ACATAGAAGAAGTGTCAGCT+CGG | 0.622596 | 3.2:-83388607 | MS.gene013085:CDS |
| AGGCGCTTCTTCGACTAGAG+TGG | 0.624160 | 3.2:+83386851 | None:intergenic |
| ACGGGCTTTAATGGCAGCCA+CGG | 0.624491 | 3.2:-83388337 | MS.gene013085:CDS |
| GAATCAAGTTGAAGAAACAA+AGG | 0.626725 | 3.2:-83386044 | MS.gene013085:CDS |
| ATATGGAAACATCTATATTG+GGG | 0.629685 | 3.2:+83385951 | None:intergenic |
| TAATTGAAGATAACGACGCA+CGG | 0.633150 | 3.2:-83388356 | MS.gene013085:CDS |
| CACCAACATGTTGAAAACAC+AGG | 0.639859 | 3.2:-83386744 | MS.gene013085:CDS |
| GGTACAATCACGATCATCTG+AGG | 0.641129 | 3.2:-83388274 | MS.gene013085:CDS |
| AATTGAAGATAACGACGCAC+GGG | 0.642654 | 3.2:-83388355 | MS.gene013085:CDS |
| TTTACATGAATTTAACGCCG+TGG | 0.662543 | 3.2:+83388320 | None:intergenic |
| AACGGGCAAGCTCAACAATG+TGG | 0.678594 | 3.2:-83387275 | MS.gene013085:CDS |
| GTTCAAGGAGATAACAGGGA+GGG | 0.679032 | 3.2:-83386816 | MS.gene013085:CDS |
| GCAAACCATCAATTTCGAAG+CGG | 0.679223 | 3.2:+83386622 | None:intergenic |
| CAACCAATGCATATTCATGG+TGG | 0.706967 | 3.2:-83389516 | MS.gene013085:CDS |
| GGACTCATTTGCTCAAAGAG+CGG | 0.709268 | 3.2:-83388946 | MS.gene013085:CDS |
| CATGAAACAAGAAATCAACA+AGG | 0.709885 | 3.2:-83386223 | MS.gene013085:CDS |
| AGAAGCGCCTCTTGAAAACG+CGG | 0.728466 | 3.2:-83386838 | MS.gene013085:CDS |
| TCTTCGACTAGAGTGGTGCG+AGG | 0.734077 | 3.2:+83386858 | None:intergenic |
| GGTTCAAGGAGATAACAGGG+AGG | 0.787897 | 3.2:-83386817 | MS.gene013085:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACAAATATTTAACAGATA+TGG | - | chr3.2:83386483-83386502 | MS.gene013085:CDS | 15.0% |
| !! | ACATTGTTTAGATATATAAT+TGG | - | chr3.2:83386343-83386362 | MS.gene013085:CDS | 15.0% |
| !! | AGTTAACAAATTTAACATAT+AGG | - | chr3.2:83388348-83388367 | MS.gene013085:CDS | 15.0% |
| !!! | ATGTTAAATTTGTTAACTTA+TGG | + | chr3.2:83388346-83388365 | None:intergenic | 15.0% |
| !!! | TTAAAATCATTGATGATAAT+GGG | - | chr3.2:83386527-83386546 | MS.gene013085:CDS | 15.0% |
| !! | ACAAAATGATTCATAATGTA+CGG | - | chr3.2:83386382-83386401 | MS.gene013085:CDS | 20.0% |
| !! | ATTCAGAAAATAGTAACAAA+AGG | - | chr3.2:83387640-83387659 | MS.gene013085:CDS | 20.0% |
| !! | TAAGAACTGAATTATCATTA+TGG | - | chr3.2:83389088-83389107 | MS.gene013085:intron | 20.0% |
| !!! | AAGAATAAAAGCTTTTCTAA+TGG | - | chr3.2:83387837-83387856 | MS.gene013085:CDS | 20.0% |
| !!! | AATTTCCCAATATTTTTCAT+AGG | + | chr3.2:83387052-83387071 | None:intergenic | 20.0% |
| !!! | ATTCGTTTTAATTTTATTGC+GGG | - | chr3.2:83386180-83386199 | MS.gene013085:CDS | 20.0% |
| !!! | CATTCGTTTTAATTTTATTG+CGG | - | chr3.2:83386179-83386198 | MS.gene013085:CDS | 20.0% |
| !!! | CTTAAAATCATTGATGATAA+TGG | - | chr3.2:83386526-83386545 | MS.gene013085:CDS | 20.0% |
| !!! | TAAAATCATTGATGATAATG+GGG | - | chr3.2:83386528-83386547 | MS.gene013085:CDS | 20.0% |
| !!! | TGAAGGATAATATTGATTTT+AGG | - | chr3.2:83387991-83388010 | MS.gene013085:CDS | 20.0% |
| !!! | TGCATATCTAATTAGTTTTA+TGG | + | chr3.2:83388505-83388524 | None:intergenic | 20.0% |
| ! | AAATATACAAAGCTTAGAAG+AGG | - | chr3.2:83387596-83387615 | MS.gene013085:CDS | 25.0% |
| ! | AATATCGATATGTCATCAAT+TGG | - | chr3.2:83388775-83388794 | MS.gene013085:CDS | 25.0% |
| ! | AGCATTCCTATGAAAAATAT+TGG | - | chr3.2:83387043-83387062 | MS.gene013085:intron | 25.0% |
| ! | ATCATGTACTACTAAGAAAA+TGG | + | chr3.2:83386303-83386322 | None:intergenic | 25.0% |
| ! | ATCCATTATCATTAATTCCA+TGG | - | chr3.2:83386124-83386143 | MS.gene013085:CDS | 25.0% |
| ! | CAAATATTTAACAGATATGG+AGG | - | chr3.2:83386486-83386505 | MS.gene013085:CDS | 25.0% |
| ! | GAAATATGATCATCTATCAA+AGG | - | chr3.2:83386648-83386667 | MS.gene013085:CDS | 25.0% |
| ! | GCATTCCTATGAAAAATATT+GGG | - | chr3.2:83387044-83387063 | MS.gene013085:intron | 25.0% |
| ! | TAACAAAAGGATGAAAGAAT+TGG | - | chr3.2:83387653-83387672 | MS.gene013085:CDS | 25.0% |
| ! | TACAAATTTGAAAACCTTAG+AGG | - | chr3.2:83387282-83387301 | MS.gene013085:CDS | 25.0% |
| ! | TACCTCTTTCAACTTATTTA+GGG | + | chr3.2:83387205-83387224 | None:intergenic | 25.0% |
| ! | TCTCTCAAATGTCTAAATAT+TGG | + | chr3.2:83389066-83389085 | None:intergenic | 25.0% |
| ! | TGAAAGAGAAAAGATTATGT+TGG | - | chr3.2:83388160-83388179 | MS.gene013085:CDS | 25.0% |
| ! | TTCCATGGAATTAATGATAA+TGG | + | chr3.2:83386129-83386148 | None:intergenic | 25.0% |
| ! | TTGAATCAGATGTTTGTAAA+TGG | - | chr3.2:83388131-83388150 | MS.gene013085:CDS | 25.0% |
| ! | TTTAATCTTGAACATCTTTC+AGG | - | chr3.2:83387762-83387781 | MS.gene013085:CDS | 25.0% |
| !! | ATTTCTTTTCTAACAGTGAA+AGG | + | chr3.2:83388852-83388871 | None:intergenic | 25.0% |
| !! | CATTTGTTTAATTGATTCCA+TGG | + | chr3.2:83386144-83386163 | None:intergenic | 25.0% |
| !! | GTTTTTCTGTTTGGTTATTA+GGG | + | chr3.2:83386789-83386808 | None:intergenic | 25.0% |
| !! | TGTTTTTCTGTTTGGTTATT+AGG | + | chr3.2:83386790-83386809 | None:intergenic | 25.0% |
| !! | TTTCTTTTCTAACAGTGAAA+GGG | + | chr3.2:83388851-83388870 | None:intergenic | 25.0% |
| !!! | AATATTGATTTTAGGACTGA+AGG | - | chr3.2:83387999-83388018 | MS.gene013085:CDS | 25.0% |
| !!! | ACCATTTGAGTTGTATTTTA+CGG | - | chr3.2:83386245-83386264 | MS.gene013085:CDS | 25.0% |
| AAACCTGAACATTGAATTGT+TGG | + | chr3.2:83386931-83386950 | None:intergenic | 30.0% | |
| AAACTGAGAAAGAGTTTGTA+AGG | - | chr3.2:83387010-83387029 | MS.gene013085:intron | 30.0% | |
| AAGAACTATAACGATGTAAC+GGG | - | chr3.2:83388203-83388222 | MS.gene013085:CDS | 30.0% | |
| AAGAGAAAAGATTATGTTGG+AGG | - | chr3.2:83388163-83388182 | MS.gene013085:CDS | 30.0% | |
| AATCCAACAATTCAATGTTC+AGG | - | chr3.2:83386925-83386944 | MS.gene013085:CDS | 30.0% | |
| AGATGATAAGTCTAGATTGA+AGG | - | chr3.2:83387974-83387993 | MS.gene013085:CDS | 30.0% | |
| ATGTAGCAAAAAACATACCT+TGG | + | chr3.2:83386055-83386074 | None:intergenic | 30.0% | |
| CATGAAACAAGAAATCAACA+AGG | - | chr3.2:83389272-83389291 | MS.gene013085:intron | 30.0% | |
| CTTGTTAAAGTCAACTAAGT+AGG | - | chr3.2:83388469-83388488 | MS.gene013085:CDS | 30.0% | |
| GAAAAATGTGAAACTAGATG+AGG | - | chr3.2:83387791-83387810 | MS.gene013085:CDS | 30.0% | |
| GAAATTGAAGACAAAGTTAC+AGG | - | chr3.2:83387066-83387085 | MS.gene013085:intron | 30.0% | |
| GAAGAACTATAACGATGTAA+CGG | - | chr3.2:83388202-83388221 | MS.gene013085:CDS | 30.0% | |
| GATATGCTTGAACATGATAT+AGG | - | chr3.2:83387393-83387412 | MS.gene013085:CDS | 30.0% | |
| GTACCTCTTTCAACTTATTT+AGG | + | chr3.2:83387206-83387225 | None:intergenic | 30.0% | |
| TAAAGTTGAATCACTTGATC+TGG | - | chr3.2:83388079-83388098 | MS.gene013085:CDS | 30.0% | |
| TAATGCTCTATATGCTCTAA+AGG | + | chr3.2:83386623-83386642 | None:intergenic | 30.0% | |
| TCAGGACAAAACAATCAAAA+TGG | - | chr3.2:83386015-83386034 | MS.gene013085:CDS | 30.0% | |
| TCCACAAAATTTATCAGTTC+TGG | + | chr3.2:83386595-83386614 | None:intergenic | 30.0% | |
| TCTATGTTGCTATCAAGAAA+AGG | - | chr3.2:83386862-83386881 | MS.gene013085:CDS | 30.0% | |
| TCTCATCATATCAAATGTTC+CGG | - | chr3.2:83386217-83386236 | MS.gene013085:CDS | 30.0% | |
| TGCTACATAACATTTCATCA+TGG | - | chr3.2:83386067-83386086 | MS.gene013085:CDS | 30.0% | |
| TTAAGTCCTGTAAAGATTGT+TGG | + | chr3.2:83388960-83388979 | None:intergenic | 30.0% | |
| ! | AACCCTAAATAAGTTGAAAG+AGG | - | chr3.2:83387200-83387219 | MS.gene013085:intron | 30.0% |
| ! | ACCAGAACTGATAAATTTTG+TGG | - | chr3.2:83386591-83386610 | MS.gene013085:CDS | 30.0% |
| ! | AGAATTTAGAATTCTGGTTG+AGG | - | chr3.2:83388902-83388921 | MS.gene013085:CDS | 30.0% |
| ! | CAAGCTTCAGAAAGAAATTT+TGG | - | chr3.2:83386981-83387000 | MS.gene013085:intron | 30.0% |
| ! | CATTTTTGAATTGGCACTTA+AGG | - | chr3.2:83388262-83388281 | MS.gene013085:CDS | 30.0% |
| ! | GAAGGTTTGAGTTATGTAAA+AGG | - | chr3.2:83389312-83389331 | MS.gene013085:intron | 30.0% |
| ! | TAAGGTTGTTAGTTTGGAAA+CGG | - | chr3.2:83387512-83387531 | MS.gene013085:CDS | 30.0% |
| ! | TCGAAACAGCATTTTTGAAT+TGG | - | chr3.2:83388253-83388272 | MS.gene013085:CDS | 30.0% |
| ! | TTGAGGAGAATTTAGAATTC+TGG | - | chr3.2:83388896-83388915 | MS.gene013085:CDS | 30.0% |
| ! | TTTCTTGATAGCAACATAGA+CGG | + | chr3.2:83386862-83386881 | None:intergenic | 30.0% |
| !! | GAATCAAGTTGAAGAAACAA+AGG | - | chr3.2:83389451-83389470 | MS.gene013085:intron | 30.0% |
| !! | TGTTGCATTGTTTTTCTGTT+TGG | + | chr3.2:83386798-83386817 | None:intergenic | 30.0% |
| !! | TGTTTTTCAAAATCCTCACT+TGG | + | chr3.2:83387867-83387886 | None:intergenic | 30.0% |
| !!! | ACTTTTTTTGACGATGAATC+TGG | + | chr3.2:83389204-83389223 | None:intergenic | 30.0% |
| !!! | CCATTTGAGTTGTATTTTAC+GGG | - | chr3.2:83386246-83386265 | MS.gene013085:CDS | 30.0% |
| !!! | TGGAAAGACAAGATTTTTTG+TGG | - | chr3.2:83388795-83388814 | MS.gene013085:CDS | 30.0% |
| AAATTCCGCTTCGAAATTGA+TGG | - | chr3.2:83388868-83388887 | MS.gene013085:CDS | 35.0% | |
| AAGGATGAAAGAATTGGAAG+AGG | - | chr3.2:83387659-83387678 | MS.gene013085:CDS | 35.0% | |
| AATGTGAAACTAGATGAGGA+AGG | - | chr3.2:83387795-83387814 | MS.gene013085:CDS | 35.0% | |
| ACAAAGCTTAGAAGAGGATA+AGG | - | chr3.2:83387602-83387621 | MS.gene013085:CDS | 35.0% | |
| ACAACTCAAATGGTAAAAGC+CGG | + | chr3.2:83386239-83386258 | None:intergenic | 35.0% | |
| AGTTACTTCTCAGAATGGAT+TGG | - | chr3.2:83387536-83387555 | MS.gene013085:CDS | 35.0% | |
| ATCACTTGATCTGGAAACTA+AGG | - | chr3.2:83388088-83388107 | MS.gene013085:CDS | 35.0% | |
| ATGTGAAACTAGATGAGGAA+GGG | - | chr3.2:83387796-83387815 | MS.gene013085:CDS | 35.0% | |
| ATTATGCATATCTGCAGGTA+AGG | - | chr3.2:83388524-83388543 | MS.gene013085:CDS | 35.0% | |
| CATCTTCGTCTATTCTGTAA+TGG | + | chr3.2:83386723-83386742 | None:intergenic | 35.0% | |
| CCCGTAAAATACAACTCAAA+TGG | + | chr3.2:83386249-83386268 | None:intergenic | 35.0% | |
| CTCTCAACAAAAATGTCGAA+AGG | - | chr3.2:83387700-83387719 | MS.gene013085:CDS | 35.0% | |
| GAAGAATTGAGTCAAGCAAT+GGG | - | chr3.2:83389363-83389382 | MS.gene013085:intron | 35.0% | |
| GAAGATCGTGCTGAAAATAT+CGG | - | chr3.2:83387936-83387955 | MS.gene013085:CDS | 35.0% | |
| GAAGTTCCAACAATCTTTAC+AGG | - | chr3.2:83388951-83388970 | MS.gene013085:CDS | 35.0% | |
| GACAAAACAATCAAAATGGC+TGG | - | chr3.2:83386019-83386038 | MS.gene013085:CDS | 35.0% | |
| GACTTCGAAAAACCTTCTTT+GGG | + | chr3.2:83386840-83386859 | None:intergenic | 35.0% | |
| GTACTAGCTATATCTGAAGA+TGG | + | chr3.2:83388715-83388734 | None:intergenic | 35.0% | |
| GTTTATCTCTTCATCCTTAG+TGG | + | chr3.2:83388569-83388588 | None:intergenic | 35.0% | |
| TAATTGAAGATAACGACGCA+CGG | - | chr3.2:83387139-83387158 | MS.gene013085:intron | 35.0% | |
| TACCAGTTCAGAAACAAATC+CGG | - | chr3.2:83388606-83388625 | MS.gene013085:CDS | 35.0% | |
| TATGCATTATGCATATCTGC+AGG | - | chr3.2:83388519-83388538 | MS.gene013085:CDS | 35.0% | |
| TCTGTTTGGTTATTAGGGTT+AGG | + | chr3.2:83386784-83386803 | None:intergenic | 35.0% | |
| TCTTGTAAGCTACACATTGA+TGG | + | chr3.2:83389159-83389178 | None:intergenic | 35.0% | |
| TGAAGAATTGAGTCAAGCAA+TGG | - | chr3.2:83389362-83389381 | MS.gene013085:intron | 35.0% | |
| TGTAGGTAAGGTTGTTAGTT+TGG | - | chr3.2:83387506-83387525 | MS.gene013085:CDS | 35.0% | |
| TTATGCATATCTGCAGGTAA+GGG | - | chr3.2:83388525-83388544 | MS.gene013085:CDS | 35.0% | |
| TTATTAGGGTTAGGAGGTAA+TGG | + | chr3.2:83386775-83386794 | None:intergenic | 35.0% | |
| TTCTAATGGAAAACCAAGTG+AGG | - | chr3.2:83387851-83387870 | MS.gene013085:CDS | 35.0% | |
| TTTACATGAATTTAACGCCG+TGG | + | chr3.2:83387178-83387197 | None:intergenic | 35.0% | |
| TTTCTAACAGTGAAAGGGAA+TGG | + | chr3.2:83388846-83388865 | None:intergenic | 35.0% | |
| TTTGATATGATGAGAGACAC+AGG | + | chr3.2:83386212-83386231 | None:intergenic | 35.0% | |
| ! | AATGAACCTCCTTAACCTTT+TGG | + | chr3.2:83387263-83387282 | None:intergenic | 35.0% |
| ! | AGAAGCATACCAAAAGGTTA+AGG | - | chr3.2:83387251-83387270 | MS.gene013085:CDS | 35.0% |
| ! | ATGGACTTGTTCAGGAAAAA+CGG | + | chr3.2:83386704-83386723 | None:intergenic | 35.0% |
| ! | TCAATGTTCAGGTTTGAGTA+AGG | - | chr3.2:83386936-83386955 | MS.gene013085:CDS | 35.0% |
| ! | TTCCTGTGTTTTCAACATGT+TGG | + | chr3.2:83388756-83388775 | None:intergenic | 35.0% |
| !! | AAAACCTTCTTTGGGATACT+TGG | + | chr3.2:83386832-83386851 | None:intergenic | 35.0% |
| !! | AGAACACAATGAAGTATTGC+AGG | - | chr3.2:83389113-83389132 | MS.gene013085:intron | 35.0% |
| !! | ATTCTGTAATGGACTTGTTC+AGG | + | chr3.2:83386712-83386731 | None:intergenic | 35.0% |
| !! | CCTTTGAGGTCTTTCTTATT+CGG | - | chr3.2:83389429-83389448 | MS.gene013085:intron | 35.0% |
| !! | CTTCATGAAAGTGTGTTTTG+AGG | + | chr3.2:83387737-83387756 | None:intergenic | 35.0% |
| !! | GAGGTAATGGATTAGTTTCA+GGG | + | chr3.2:83386762-83386781 | None:intergenic | 35.0% |
| !! | GTTTCTAGTGAACTACAAGA+AGG | - | chr3.2:83389294-83389313 | MS.gene013085:intron | 35.0% |
| !! | TTGATTGTTTTGTCCTGATG+TGG | + | chr3.2:83386013-83386032 | None:intergenic | 35.0% |
| AAAGAGCGGAAATGTACTAC+AGG | - | chr3.2:83386563-83386582 | MS.gene013085:CDS | 40.0% | |
| AACAGATATGGAGGAGATAG+TGG | - | chr3.2:83386495-83386514 | MS.gene013085:CDS | 40.0% | |
| AATTGAAGATAACGACGCAC+GGG | - | chr3.2:83387140-83387159 | MS.gene013085:intron | 40.0% | |
| ACTTGATCTGGAAACTAAGG+AGG | - | chr3.2:83388091-83388110 | MS.gene013085:CDS | 40.0% | |
| AGCAATCGTGAATGATGCTA+AGG | - | chr3.2:83387914-83387933 | MS.gene013085:CDS | 40.0% | |
| AGCATACCAAAAGGTTAAGG+AGG | - | chr3.2:83387254-83387273 | MS.gene013085:CDS | 40.0% | |
| ATATAGGCATGTTGCAAGAG+AGG | - | chr3.2:83387409-83387428 | MS.gene013085:CDS | 40.0% | |
| CAACCAATGCATATTCATGG+TGG | - | chr3.2:83385979-83385998 | MS.gene013085:CDS | 40.0% | |
| CAATGCATATTCATGGTGGT+GGG | - | chr3.2:83385983-83386002 | MS.gene013085:CDS | 40.0% | |
| CACCAACATGTTGAAAACAC+AGG | - | chr3.2:83388751-83388770 | MS.gene013085:CDS | 40.0% | |
| CAGCAACCAATGCATATTCA+TGG | - | chr3.2:83385976-83385995 | MS.gene013085:CDS | 40.0% | |
| CATCAAGCTGCAAAGTTTCA+AGG | - | chr3.2:83389237-83389256 | MS.gene013085:intron | 40.0% | |
| CATGTTGCAAGAGAGGATTA+AGG | - | chr3.2:83387416-83387435 | MS.gene013085:CDS | 40.0% | |
| CCGAATAAGAAAGACCTCAA+AGG | + | chr3.2:83389432-83389451 | None:intergenic | 40.0% | |
| CTTTCCAAGCAAACGAATCA+GGG | - | chr3.2:83387312-83387331 | MS.gene013085:CDS | 40.0% | |
| GAAAAGCTTGAGGAAGATTC+GGG | - | chr3.2:83387438-83387457 | MS.gene013085:CDS | 40.0% | |
| GAAGAATGTAGTTGCCACTA+AGG | - | chr3.2:83388552-83388571 | MS.gene013085:CDS | 40.0% | |
| GAGGATTAAGGAAAAGCTTG+AGG | - | chr3.2:83387428-83387447 | MS.gene013085:CDS | 40.0% | |
| GCAAACCATCAATTTCGAAG+CGG | + | chr3.2:83388876-83388895 | None:intergenic | 40.0% | |
| GGAAAAGCTTGAGGAAGATT+CGG | - | chr3.2:83387437-83387456 | MS.gene013085:CDS | 40.0% | |
| GGACTTCGAAAAACCTTCTT+TGG | + | chr3.2:83386841-83386860 | None:intergenic | 40.0% | |
| GTTTGGTTATTAGGGTTAGG+AGG | + | chr3.2:83386781-83386800 | None:intergenic | 40.0% | |
| TGGAAAGGAAGTTACCTCTA+AGG | + | chr3.2:83387299-83387318 | None:intergenic | 40.0% | |
| TGTGAAACTAGATGAGGAAG+GGG | - | chr3.2:83387797-83387816 | MS.gene013085:CDS | 40.0% | |
| TGTGCAAGATCTAACACAAC+AGG | - | chr3.2:83388022-83388041 | MS.gene013085:CDS | 40.0% | |
| TTGGGATACTTGGAGGTTTA+GGG | + | chr3.2:83386822-83386841 | None:intergenic | 40.0% | |
| ! | AGCTAGAGAAGCATACCAAA+AGG | - | chr3.2:83387245-83387264 | MS.gene013085:CDS | 40.0% |
| ! | TTTGGGATACTTGGAGGTTT+AGG | + | chr3.2:83386823-83386842 | None:intergenic | 40.0% |
| !! | ACATAGAAGAAGTGTCAGCT+CGG | - | chr3.2:83386888-83386907 | MS.gene013085:CDS | 40.0% |
| !! | ATCCGGATTTGTTTCTGAAC+TGG | + | chr3.2:83388611-83388630 | None:intergenic | 40.0% |
| !! | CGAAATTGATGGTTTGCTTG+AGG | - | chr3.2:83388879-83388898 | MS.gene013085:CDS | 40.0% |
| !! | GGAGGTAATGGATTAGTTTC+AGG | + | chr3.2:83386763-83386782 | None:intergenic | 40.0% |
| ACCTCCAAGTATCCCAAAGA+AGG | - | chr3.2:83386825-83386844 | MS.gene013085:CDS | 45.0% | |
| ACGGCAGTTACTTCTCAGAA+TGG | - | chr3.2:83387531-83387550 | MS.gene013085:CDS | 45.0% | |
| AGATGAGGAAGGGGAGAATT+TGG | - | chr3.2:83387806-83387825 | MS.gene013085:CDS | 45.0% | |
| CCAATGCATATTCATGGTGG+TGG | - | chr3.2:83385982-83386001 | MS.gene013085:CDS | 45.0% | |
| CCACCACCATGAATATGCAT+TGG | + | chr3.2:83385985-83386004 | None:intergenic | 45.0% | |
| CCTTTCCAAGCAAACGAATC+AGG | - | chr3.2:83387311-83387330 | MS.gene013085:CDS | 45.0% | |
| CTGTATTGTCTCTGTAGTGC+TGG | + | chr3.2:83389501-83389520 | None:intergenic | 45.0% | |
| GAAAAACGGTGGCAATTGTG+CGG | + | chr3.2:83386690-83386709 | None:intergenic | 45.0% | |
| GAGATGATCGATGAGCTTGT+AGG | - | chr3.2:83387489-83387508 | MS.gene013085:CDS | 45.0% | |
| GATCGATGAGCTTGTAGGTA+AGG | - | chr3.2:83387494-83387513 | MS.gene013085:CDS | 45.0% | |
| GGACTCATTTGCTCAAAGAG+CGG | - | chr3.2:83386549-83386568 | MS.gene013085:CDS | 45.0% | |
| GGTACAATCACGATCATCTG+AGG | - | chr3.2:83387221-83387240 | MS.gene013085:intron | 45.0% | |
| GTTCAAGGAGATAACAGGGA+GGG | - | chr3.2:83388679-83388698 | MS.gene013085:CDS | 45.0% | |
| ! | ATCTCCCTGATTCGTTTGCT+TGG | + | chr3.2:83387319-83387338 | None:intergenic | 45.0% |
| ! | CCTGATTCGTTTGCTTGGAA+AGG | + | chr3.2:83387314-83387333 | None:intergenic | 45.0% |
| ! | GACTTGTTCAGGAAAAACGG+TGG | + | chr3.2:83386701-83386720 | None:intergenic | 45.0% |
| !! | ACCTTCTTTGGGATACTTGG+AGG | + | chr3.2:83386829-83386848 | None:intergenic | 45.0% |
| AACGGGCAAGCTCAACAATG+TGG | - | chr3.2:83388220-83388239 | MS.gene013085:CDS | 50.0% | |
| ACGCGGTTCAAGGAGATAAC+AGG | - | chr3.2:83388674-83388693 | MS.gene013085:CDS | 50.0% | |
| CCTCTTGAAAACGCGGTTCA+AGG | - | chr3.2:83388664-83388683 | MS.gene013085:CDS | 50.0% | |
| CGCGGTTCAAGGAGATAACA+GGG | - | chr3.2:83388675-83388694 | MS.gene013085:CDS | 50.0% | |
| GGTTCAAGGAGATAACAGGG+AGG | - | chr3.2:83388678-83388697 | MS.gene013085:CDS | 50.0% | |
| TGGCTGGAACAAAGTCTCCA+AGG | - | chr3.2:83386035-83386054 | MS.gene013085:CDS | 50.0% | |
| ! | TAACGACGCACGGGCTTTAA+TGG | - | chr3.2:83387149-83387168 | MS.gene013085:intron | 50.0% |
| ! | TATGGAGGAGATAGTGGCTG+AGG | - | chr3.2:83386501-83386520 | MS.gene013085:CDS | 50.0% |
| !! | ACCTCAAAGGCATTCTAGCG+CGG | + | chr3.2:83389419-83389438 | None:intergenic | 50.0% |
| !! | AGAAGCGCCTCTTGAAAACG+CGG | - | chr3.2:83388657-83388676 | MS.gene013085:CDS | 50.0% |
| !! | CCTTGAACCGCGTTTTCAAG+AGG | + | chr3.2:83388667-83388686 | None:intergenic | 50.0% |
| AGGCGCTTCTTCGACTAGAG+TGG | + | chr3.2:83388647-83388666 | None:intergenic | 55.0% | |
| GTGGTGCGAGGACTTTCATC+CGG | + | chr3.2:83388628-83388647 | None:intergenic | 55.0% | |
| TCTTCGACTAGAGTGGTGCG+AGG | + | chr3.2:83388640-83388659 | None:intergenic | 55.0% | |
| ! | ACGGGCTTTAATGGCAGCCA+CGG | - | chr3.2:83387158-83387177 | MS.gene013085:intron | 55.0% |
| AGGCATTCTAGCGCGGCTTG+TGG | + | chr3.2:83389412-83389431 | None:intergenic | 60.0% | |
| GCCGCGCTAGAATGCCTTTG+AGG | - | chr3.2:83389415-83389434 | MS.gene013085:intron | 60.0% | |
| !! | GGTGGTGGGTTAGCCACATC+AGG | - | chr3.2:83385997-83386016 | MS.gene013085:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 83385963 | 83389554 | 83385963 | ID=MS.gene013085 |
| chr3.2 | mRNA | 83385963 | 83389554 | 83385963 | ID=MS.gene013085.t1;Parent=MS.gene013085 |
| chr3.2 | exon | 83389461 | 83389554 | 83389461 | ID=MS.gene013085.t1.exon1;Parent=MS.gene013085.t1 |
| chr3.2 | CDS | 83389461 | 83389554 | 83389461 | ID=cds.MS.gene013085.t1;Parent=MS.gene013085.t1 |
| chr3.2 | exon | 83387234 | 83389017 | 83387234 | ID=MS.gene013085.t1.exon2;Parent=MS.gene013085.t1 |
| chr3.2 | CDS | 83387234 | 83389017 | 83387234 | ID=cds.MS.gene013085.t1;Parent=MS.gene013085.t1 |
| chr3.2 | exon | 83385963 | 83386976 | 83385963 | ID=MS.gene013085.t1.exon3;Parent=MS.gene013085.t1 |
| chr3.2 | CDS | 83385963 | 83386976 | 83385963 | ID=cds.MS.gene013085.t1;Parent=MS.gene013085.t1 |
| Gene Sequence |
| Protein sequence |
