AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene013385

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene013385.t1 MTR_3g094850 96.369 358 9 2 1 356 1 356 0.0 702
MS.gene013385.t1 MTR_8g030940 30.712 267 155 8 4 250 20 276 7.10e-28 112
MS.gene013385.t1 MTR_4g114110 29.091 385 219 18 2 352 74 438 2.36e-25 106
MS.gene013385.t1 MTR_2g019230 29.592 294 178 11 9 280 52 338 7.34e-25 104
MS.gene013385.t1 MTR_8g085600 28.618 304 193 11 9 294 77 374 1.81e-24 103
MS.gene013385.t1 MTR_3g073640 24.128 344 184 7 4 270 38 381 1.69e-21 95.9
MS.gene013385.t1 MTR_7g066320 93.478 46 1 1 1 46 32 75 1.65e-19 82.4
MS.gene013385.t1 MTR_2g008440 24.058 345 182 7 6 270 40 384 2.85e-18 86.3
MS.gene013385.t1 MTR_8g080370 27.426 237 152 7 4 224 46 278 5.57e-18 84.7
MS.gene013385.t1 MTR_3g085570 29.302 215 141 6 5 212 31 241 1.23e-16 80.5
MS.gene013385.t1 MTR_2g094093 25.723 311 195 11 6 290 17 317 9.02e-16 78.2
MS.gene013385.t1 MTR_7g095220 30.612 196 115 5 7 186 2 192 2.77e-15 76.3
MS.gene013385.t1 MTR_3g108860 24.221 289 181 11 6 277 14 281 1.67e-13 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene013385.t1 AT2G21950 55.618 356 141 7 7 351 18 367 3.10e-138 398
MS.gene013385.t1 AT4G39550 38.421 380 194 12 5 353 19 389 1.04e-71 228
MS.gene013385.t1 AT4G39580 35.925 373 203 13 2 350 9 369 3.86e-64 208
MS.gene013385.t1 AT4G39240 34.358 358 202 10 13 356 37 375 4.78e-61 200
MS.gene013385.t1 AT5G49000 35.813 363 203 14 11 356 23 372 8.87e-57 189
MS.gene013385.t1 AT4G23580 36.141 368 194 14 1 340 9 363 3.70e-55 185
MS.gene013385.t1 AT4G39590 36.605 377 193 17 10 355 38 399 5.55e-55 185
MS.gene013385.t1 AT4G33900 36.134 357 186 14 13 340 15 358 1.35e-54 184
MS.gene013385.t1 AT5G48990 34.204 383 205 14 2 356 9 372 5.87e-54 182
MS.gene013385.t1 AT4G29370 31.622 370 221 12 6 356 22 378 4.43e-52 177
MS.gene013385.t1 AT4G11770 32.593 405 195 15 10 356 12 396 4.08e-51 175
MS.gene013385.t1 AT1G60570 34.565 379 219 14 1 356 9 381 7.94e-51 174
MS.gene013385.t1 AT4G19330 32.320 362 205 11 13 351 34 378 6.71e-49 169
MS.gene013385.t1 AT3G43710 33.718 347 207 10 10 342 26 363 3.48e-48 167
MS.gene013385.t1 AT4G14905 31.579 342 201 10 15 342 36 358 8.43e-48 166
MS.gene013385.t1 AT4G14905 31.579 342 201 10 15 342 36 358 8.43e-48 166
MS.gene013385.t1 AT4G39600 33.516 364 201 13 11 350 15 361 9.56e-48 166
MS.gene013385.t1 AT4G39600 33.516 364 201 13 11 350 26 372 1.03e-47 166
MS.gene013385.t1 AT4G19870 32.011 378 209 10 15 356 35 400 1.41e-47 166
MS.gene013385.t1 AT4G19870 32.011 378 209 10 15 356 35 400 1.41e-47 166
MS.gene013385.t1 AT2G29600 33.060 366 216 13 11 356 59 415 4.20e-47 165
MS.gene013385.t1 AT4G39290 31.551 374 212 13 2 350 5 359 1.23e-46 162
MS.gene013385.t1 AT2G29810 33.875 369 224 12 1 356 22 383 1.35e-46 163
MS.gene013385.t1 AT1G19930 34.722 360 181 11 1 340 1 326 1.78e-45 159
MS.gene013385.t1 AT4G39570 33.511 376 209 14 10 356 32 395 1.49e-44 158
MS.gene013385.t1 AT2G29830 31.492 362 203 14 2 333 13 359 1.65e-44 157
MS.gene013385.t1 AT4G35120 33.515 367 220 11 10 356 27 389 2.06e-44 157
MS.gene013385.t1 AT5G49000 32.857 350 187 14 11 356 23 328 4.12e-44 155
MS.gene013385.t1 AT4G34170 34.564 298 168 10 13 305 15 290 4.82e-44 154
MS.gene013385.t1 AT4G38940 32.520 369 210 13 9 356 20 370 7.95e-44 155
MS.gene013385.t1 AT2G29770 32.432 370 215 15 2 348 22 379 8.72e-44 155
MS.gene013385.t1 AT1G61540 33.592 387 204 18 10 356 27 400 5.68e-43 154
MS.gene013385.t1 AT4G39756 30.495 364 213 13 12 351 22 369 8.36e-42 150
MS.gene013385.t1 AT4G11750 31.443 388 216 12 10 356 8 386 1.31e-41 150
MS.gene013385.t1 AT5G51250 32.888 374 218 13 10 356 1 368 2.53e-41 149
MS.gene013385.t1 AT2G21680 32.338 402 200 18 13 356 42 429 5.60e-41 149
MS.gene013385.t1 AT5G38680 31.868 364 193 12 6 344 12 345 2.20e-40 145
MS.gene013385.t1 AT3G27910 35.000 260 149 9 105 356 47 294 5.71e-40 143
MS.gene013385.t1 AT3G06570 31.593 364 213 13 13 349 29 383 1.21e-39 144
MS.gene013385.t1 AT1G19470 31.347 386 225 16 3 356 35 412 2.65e-39 144
MS.gene013385.t1 AT2G22030 32.361 377 216 14 4 355 20 382 1.92e-38 141
MS.gene013385.t1 AT4G19865 29.947 374 215 12 15 356 35 393 2.27e-38 141
MS.gene013385.t1 AT4G39760 29.973 367 219 14 12 356 19 369 7.28e-38 139
MS.gene013385.t1 AT1G19460 30.874 366 224 13 13 356 58 416 9.05e-38 140
MS.gene013385.t1 AT3G46050 34.060 367 189 15 2 341 5 345 1.52e-37 139
MS.gene013385.t1 AT5G48980 32.021 381 207 18 11 355 33 397 2.43e-37 139
MS.gene013385.t1 AT2G29780 31.135 379 215 13 5 356 39 398 3.67e-37 138
MS.gene013385.t1 AT5G39560 32.533 375 196 16 12 344 31 390 4.88e-37 138
MS.gene013385.t1 AT2G44030 32.231 363 197 14 12 347 21 361 1.14e-36 136
MS.gene013385.t1 AT4G39560 39.024 246 136 7 1 235 18 260 1.19e-36 134
MS.gene013385.t1 AT4G39560 39.024 246 136 7 1 235 18 260 1.19e-36 134
MS.gene013385.t1 AT5G02980 34.294 347 175 12 7 341 11 316 2.76e-36 134
MS.gene013385.t1 AT5G03000 33.043 345 173 13 8 341 38 335 2.03e-35 132
MS.gene013385.t1 AT2G44630 32.416 327 184 10 12 317 26 336 4.50e-35 132
MS.gene013385.t1 AT4G11745 34.483 261 146 12 107 356 36 282 7.79e-35 129
MS.gene013385.t1 AT4G19250 34.454 238 137 8 117 351 2 223 1.45e-34 127
MS.gene013385.t1 AT2G29800 31.054 351 210 11 13 343 63 401 2.80e-34 130
MS.gene013385.t1 AT4G25710 30.376 372 224 10 11 356 28 390 9.91e-34 129
MS.gene013385.t1 AT2G29820 31.098 328 194 13 22 333 53 364 5.89e-33 126
MS.gene013385.t1 AT2G29780 33.955 268 150 8 2 250 36 295 7.55e-33 125
MS.gene013385.t1 AT5G28160 27.424 361 186 11 12 350 12 318 9.06e-30 117
MS.gene013385.t1 AT5G28180 27.049 366 182 14 12 350 39 346 3.85e-29 115
MS.gene013385.t1 AT2G22050 36.170 235 115 12 12 223 33 255 1.16e-28 112
MS.gene013385.t1 AT3G24610 28.346 381 182 12 4 342 22 353 1.34e-28 114
MS.gene013385.t1 AT2G22050 36.364 231 112 12 12 219 33 251 4.46e-28 110
MS.gene013385.t1 AT2G03460 31.624 234 149 6 124 350 21 250 7.82e-28 110
MS.gene013385.t1 AT2G44700 28.771 358 227 12 9 355 27 367 8.60e-28 112
MS.gene013385.t1 AT4G02310 29.526 359 220 14 3 350 6 342 2.43e-27 110
MS.gene013385.t1 AT4G39753 28.177 362 225 14 15 354 40 388 2.68e-27 111
MS.gene013385.t1 AT1G55270 27.763 371 223 13 9 352 78 430 5.92e-27 110
MS.gene013385.t1 AT2G29860 35.407 209 122 7 6 206 15 218 6.93e-27 107
MS.gene013385.t1 AT3G10510 27.945 365 209 14 2 333 7 350 1.59e-26 108
MS.gene013385.t1 AT2G41360 28.534 382 228 19 1 351 1 368 2.39e-26 108
MS.gene013385.t1 AT3G08810 27.957 372 194 11 2 349 15 336 4.93e-26 107
MS.gene013385.t1 AT2G20380 26.684 386 209 16 2 356 6 348 8.95e-26 106
MS.gene013385.t1 AT5G03020 30.058 346 198 11 15 348 22 335 1.24e-25 105
MS.gene013385.t1 AT5G38670 27.273 374 171 15 1 356 1 291 2.49e-23 98.6
MS.gene013385.t1 AT4G25710 32.083 240 141 5 11 228 28 267 6.08e-23 97.1
MS.gene013385.t1 AT4G36840 31.111 225 129 8 138 342 1 219 2.52e-21 92.0
MS.gene013385.t1 AT3G61350 27.138 269 173 10 9 265 21 278 5.13e-21 93.2
MS.gene013385.t1 AT3G61350 27.138 269 173 10 9 265 21 278 5.13e-21 93.2
MS.gene013385.t1 AT1G67480 29.710 276 170 10 9 266 39 308 9.63e-21 92.8
MS.gene013385.t1 AT1G67480 29.710 276 170 10 9 266 39 308 9.63e-21 92.8
MS.gene013385.t1 AT1G67480 29.710 276 170 10 9 266 39 308 9.63e-21 92.8
MS.gene013385.t1 AT1G30090 28.438 320 190 12 9 302 53 359 1.41e-20 92.4
MS.gene013385.t1 AT1G22040 25.843 356 181 8 9 281 43 398 1.76e-20 92.8
MS.gene013385.t1 AT5G02995 27.848 316 194 9 29 332 2 295 1.85e-19 88.2
MS.gene013385.t1 AT1G27420 27.368 285 182 10 3 268 4 282 2.39e-17 82.4
MS.gene013385.t1 AT4G36840 30.583 206 119 7 138 323 1 202 3.15e-17 79.7
MS.gene013385.t1 AT3G63220 25.806 310 200 11 2 294 4 300 1.06e-16 80.9
MS.gene013385.t1 AT3G63220 25.806 310 200 11 2 294 4 300 1.06e-16 80.9
MS.gene013385.t1 AT3G63220 26.230 305 195 11 7 294 2 293 2.48e-16 79.7
MS.gene013385.t1 AT2G45406 42.169 83 46 2 109 190 1 82 1.79e-14 69.7
MS.gene013385.t1 AT5G02990 35.556 135 83 2 16 146 24 158 2.86e-13 67.4
MS.gene013385.t1 AT1G16250 26.639 244 153 8 6 227 5 244 5.30e-12 67.0
MS.gene013385.t1 AT1G16250 26.639 244 153 8 6 227 5 244 5.30e-12 67.0
MS.gene013385.t1 AT5G60570 24.057 212 151 5 1 210 41 244 9.83e-12 66.2
MS.gene013385.t1 AT5G60570 24.057 212 151 5 1 210 41 244 9.83e-12 66.2
MS.gene013385.t1 AT5G60570 24.057 212 151 5 1 210 41 244 9.83e-12 66.2
MS.gene013385.t1 AT1G31350 26.346 353 213 13 4 317 30 374 4.07e-11 64.3
MS.gene013385.t1 AT1G31350 26.346 353 213 13 4 317 66 410 6.44e-11 63.9

Find 148 sgRNAs with CRISPR-Local

Find 155 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTATTGCTATGATTATTT+AGG 0.101723 3.4:+86277834 MS.gene013385:CDS
TGGGAAATTGGTTGTGGTTT+GGG 0.195904 3.4:+86277962 MS.gene013385:CDS
AGAATAAGGATGGGGAATTA+TGG 0.232884 3.4:+86278066 MS.gene013385:CDS
ATCCATTTCTCACGAATTTC+TGG 0.252013 3.4:-86277663 None:intergenic
ATGGGATCAGGTTTGAGTTT+TGG 0.259611 3.4:-86277110 None:intergenic
GACCCGTGCAAGGCAGTTTA+TGG 0.265673 3.4:-86277151 None:intergenic
TGTATTGCTATGATTATTTA+GGG 0.266313 3.4:+86277835 MS.gene013385:CDS
TGATTATTTAGGGAAAATTA+AGG 0.267251 3.4:+86277845 MS.gene013385:CDS
GTGGGAAATTGGTTGTGGTT+TGG 0.275006 3.4:+86277961 MS.gene013385:CDS
CTCTCCCACGCTCCATTATA+AGG 0.279859 3.4:-86277753 None:intergenic
CAGTTTATGGCTACGTCGTC+TGG 0.300590 3.4:-86277138 None:intergenic
GGCTGATGTTGGTGGGAAAT+TGG 0.300862 3.4:+86277950 MS.gene013385:CDS
CTTTCCCAGCGGTTGGTAAC+AGG 0.327535 3.4:-86277627 None:intergenic
GTTGGGAGGGAGCTTGATTT+AGG 0.327637 3.4:+86277777 MS.gene013385:CDS
AATTATGGGGTGAAGTTTGT+TGG 0.338791 3.4:+86278081 MS.gene013385:CDS
GTGGAGAAGAGAGGAGAGAA+TGG 0.338796 3.4:-86277218 None:intergenic
CTCCGACCAATTTGCTGATC+TGG 0.348732 3.4:-86277595 None:intergenic
GAATAAGGATGGGGAATTAT+GGG 0.351182 3.4:+86278067 MS.gene013385:CDS
AAGGAAGAGGAGGGAGAGGA+AGG 0.360909 3.4:-86277353 None:intergenic
TGTGAACAAGAAGAAGAATA+AGG 0.374357 3.4:+86278052 MS.gene013385:CDS
GAGGAGAGAATGGATTGGTT+TGG 0.385212 3.4:-86277208 None:intergenic
CGCCACCCGCATGGAGGGAC+CGG 0.390576 3.4:-86277499 None:intergenic
CGGGGAGCCAGCGGTGGAAT+CGG 0.393995 3.4:-86277479 None:intergenic
CACCAGAAATTCGTGAGAAA+TGG 0.399575 3.4:+86277661 MS.gene013385:CDS
AGGGGAAAGAAATGGAGATT+TGG 0.400105 3.4:+86278015 MS.gene013385:CDS
GGGGAAGGAAGAGGAGGGAG+AGG 0.400998 3.4:-86277357 None:intergenic
GAAGGAGACGGTGGTTATTG+TGG 0.410855 3.4:-86277335 None:intergenic
GAGAGAGGTAGAGGATGTGT+TGG 0.414107 3.4:-86277275 None:intergenic
TTGATTGCCGATTCCACCGC+TGG 0.415692 3.4:+86277472 MS.gene013385:CDS
TATTGTGGAGGGTGAAGAAT+TGG 0.417411 3.4:-86277320 None:intergenic
TGAACAATGGAAGATCCTTT+AGG 0.424469 3.4:-86278125 None:intergenic
GTGGAAGGAGTTGAAAGGTT+TGG 0.425255 3.4:+86277890 MS.gene013385:CDS
CGTCTGGGAGGGATGGGATC+AGG 0.425632 3.4:-86277122 None:intergenic
AATGTTCTTTCTGTTCCTAA+AGG 0.426640 3.4:+86278110 MS.gene013385:CDS
GATTATTTAGGGAAAATTAA+GGG 0.427665 3.4:+86277846 MS.gene013385:CDS
TTGGTTTGGAAACGAGGGTG+AGG 0.443707 3.4:-86277194 None:intergenic
GCTACGTCGTCTGGGAGGGA+TGG 0.445851 3.4:-86277129 None:intergenic
ATGGAGCGTGGGAGAGCGTT+GGG 0.446205 3.4:+86277760 MS.gene013385:CDS
ATGTACCATCTCGTCATGTA+TGG 0.447118 3.4:+86277445 MS.gene013385:CDS
GCGCGTGAATTCGCAGCTGC+TGG 0.448675 3.4:+86277519 MS.gene013385:CDS
CGATTCCACCGCTGGCTCCC+CGG 0.454099 3.4:+86277480 MS.gene013385:CDS
TAGAGGATGTGTTGGGTGGA+AGG 0.455700 3.4:-86277267 None:intergenic
CTACGTCGTCTGGGAGGGAT+GGG 0.457938 3.4:-86277128 None:intergenic
GGAGGGAGCTTGATTTAGGT+TGG 0.464558 3.4:+86277781 MS.gene013385:CDS
GCGTAAGCGGAGCCGATTGT+AGG 0.471244 3.4:-86277378 None:intergenic
CGTAAGCGGAGCCGATTGTA+GGG 0.471976 3.4:-86277377 None:intergenic
GTGTGCGGAGAGAGAGGTAG+AGG 0.475726 3.4:-86277284 None:intergenic
TGTTGGTGGGAAATTGGTTG+TGG 0.476458 3.4:+86277956 MS.gene013385:CDS
CCTCTTCCTTCCCCTACAAT+CGG 0.477902 3.4:+86277366 MS.gene013385:CDS
AACAAGAAGAAGAATAAGGA+TGG 0.480627 3.4:+86278056 MS.gene013385:CDS
GAGGAGGGAGAGGAAGGAGA+CGG 0.483815 3.4:-86277347 None:intergenic
TCGATCCTGTTACCAACCGC+TGG 0.491929 3.4:+86277622 MS.gene013385:CDS
AGAGGATGTGTTGGGTGGAA+GGG 0.494197 3.4:-86277266 None:intergenic
AGCGGTGGAATCGGCAATCA+AGG 0.496819 3.4:-86277470 None:intergenic
AAATAAGAAGGGGAAAGAAA+TGG 0.497591 3.4:+86278007 MS.gene013385:CDS
CACCACAAAATCTACCTCAT+TGG 0.497975 3.4:+86277408 MS.gene013385:CDS
GCTCCCCGGTCCCTCCATGC+GGG 0.498399 3.4:+86277494 MS.gene013385:CDS
GAGGGAGAGGAAGGAGACGG+TGG 0.498435 3.4:-86277344 None:intergenic
TGGTTTGGAAACGAGGGTGA+GGG 0.501416 3.4:-86277193 None:intergenic
GCCACCCGCATGGAGGGACC+GGG 0.502655 3.4:-86277498 None:intergenic
AGGGTTGTGTGGTGAGAGCG+TGG 0.503990 3.4:-86277174 None:intergenic
TCACGAATTTCTGGTGGACT+AGG 0.504253 3.4:-86277654 None:intergenic
GAAGAGAGGAGAGAATGGAT+TGG 0.505986 3.4:-86277213 None:intergenic
GTTTACCAAGGTTTCTGTGT+GGG 0.506144 3.4:+86277919 MS.gene013385:CDS
AGGGACCGGGGAGCCAGCGG+TGG 0.509897 3.4:-86277485 None:intergenic
GGGAGAGCAACTGTTGTGGA+TGG 0.510495 3.4:+86277807 MS.gene013385:CDS
GCTACAATGGCTGATGTTGG+TGG 0.511043 3.4:+86277942 MS.gene013385:CDS
GAATTTGAATGCAAATAAGA+AGG 0.511518 3.4:+86277995 MS.gene013385:CDS
CACGCTAGCGCGGTCGTAGA+CGG 0.513221 3.4:+86277687 MS.gene013385:CDS
AGAGAGGTAGAGGATGTGTT+GGG 0.517370 3.4:-86277274 None:intergenic
AATTTGAATGCAAATAAGAA+GGG 0.517396 3.4:+86277996 MS.gene013385:CDS
TTGTGGTTTGGGAGTGTCAA+AGG 0.519615 3.4:+86277973 MS.gene013385:CDS
CATTTCTCACGAATTTCTGG+TGG 0.520076 3.4:-86277660 None:intergenic
GGTGAAGAATTGGAGAGAGG+TGG 0.521152 3.4:-86277310 None:intergenic
GTTTCTGTGTGGGGCTACAA+TGG 0.522064 3.4:+86277929 MS.gene013385:CDS
CCGATTGTAGGGGAAGGAAG+AGG 0.526253 3.4:-86277366 None:intergenic
AATGGATTGGTTTGGAAACG+AGG 0.527115 3.4:-86277200 None:intergenic
CGTCATCGGTGGTTGCGTGC+CGG 0.527892 3.4:+86277563 MS.gene013385:CDS
GAGGTAGAGGATGTGTTGGG+TGG 0.532415 3.4:-86277271 None:intergenic
TGAAGAAGAGTGGAGAAGAG+AGG 0.534364 3.4:-86277227 None:intergenic
GGGGCTACAATGGCTGATGT+TGG 0.535073 3.4:+86277939 MS.gene013385:CDS
CACAAAATCTACCTCATTGG+TGG 0.536943 3.4:+86277411 MS.gene013385:CDS
TAGCCATAAACTGCCTTGCA+CGG 0.537984 3.4:+86277148 MS.gene013385:CDS
AATGGAGCGTGGGAGAGCGT+TGG 0.540307 3.4:+86277759 MS.gene013385:CDS
TGGAGCGTGTGCGGAGAGAG+AGG 0.541247 3.4:-86277290 None:intergenic
CAGCTGCTGGTGTTATCGAC+GGG 0.541290 3.4:+86277532 MS.gene013385:CDS
TTTACCAAGGTTTCTGTGTG+GGG 0.550464 3.4:+86277920 MS.gene013385:CDS
TCACGCGCCACCCGCATGGA+GGG 0.550890 3.4:-86277504 None:intergenic
AGCTTGATTTAGGTTGGCGC+GGG 0.552408 3.4:+86277787 MS.gene013385:CDS
AGGAACACTTTCCCAGCGGT+TGG 0.557279 3.4:-86277634 None:intergenic
CTACAATGGCTGATGTTGGT+GGG 0.559479 3.4:+86277943 MS.gene013385:CDS
TGGAGGGACCGGGGAGCCAG+CGG 0.559843 3.4:-86277488 None:intergenic
TATGGCTACGTCGTCTGGGA+GGG 0.561867 3.4:-86277133 None:intergenic
GAGCGAGCGGTGAAGAAGAG+TGG 0.563340 3.4:-86277237 None:intergenic
CGATCCTGTTACCAACCGCT+GGG 0.564306 3.4:+86277623 MS.gene013385:CDS
GAGAGCGTGGGACCCGTGCA+AGG 0.565651 3.4:-86277161 None:intergenic
GGAGAGAGGTGGAGCGTGTG+CGG 0.565891 3.4:-86277299 None:intergenic
ACAAGAAGAAGAATAAGGAT+GGG 0.566175 3.4:+86278057 MS.gene013385:CDS
AGTTTATGGCTACGTCGTCT+GGG 0.567545 3.4:-86277137 None:intergenic
TTCCAGATCAGCAAATTGGT+CGG 0.568075 3.4:+86277593 MS.gene013385:CDS
ATTGTAGGGGAAGGAAGAGG+AGG 0.569549 3.4:-86277363 None:intergenic
AGCCATAAACTGCCTTGCAC+GGG 0.572097 3.4:+86277149 MS.gene013385:CDS
CAAGAAGAAGAATAAGGATG+GGG 0.573883 3.4:+86278058 MS.gene013385:CDS
ATGGATTGGTTTGGAAACGA+GGG 0.575321 3.4:-86277199 None:intergenic
AGCGTGGGAGAGCGTTGGGA+GGG 0.581664 3.4:+86277764 MS.gene013385:CDS
GAATTCACGCGCCACCCGCA+TGG 0.582008 3.4:-86277508 None:intergenic
CCCCGGTCCCTCCATGCGGG+TGG 0.583728 3.4:+86277497 MS.gene013385:CDS
GGCTCCCCGGTCCCTCCATG+CGG 0.585977 3.4:+86277493 MS.gene013385:CDS
CAGATCAGCAAATTGGTCGG+AGG 0.586808 3.4:+86277596 MS.gene013385:CDS
GCAGCTGCTGGTGTTATCGA+CGG 0.586899 3.4:+86277531 MS.gene013385:CDS
GAGCGTGGGAGAGCGTTGGG+AGG 0.588514 3.4:+86277763 MS.gene013385:CDS
GAGGGTGAAGAATTGGAGAG+AGG 0.589538 3.4:-86277313 None:intergenic
GAGCTTGATTTAGGTTGGCG+CGG 0.591579 3.4:+86277786 MS.gene013385:CDS
GGAGACGGTGGTTATTGTGG+AGG 0.593326 3.4:-86277332 None:intergenic
GGAGAGCAACTGTTGTGGAT+GGG 0.594745 3.4:+86277808 MS.gene013385:CDS
AATAAGGATGGGGAATTATG+GGG 0.597570 3.4:+86278068 MS.gene013385:CDS
TTGTAGGGGAAGGAAGAGGA+GGG 0.601044 3.4:-86277362 None:intergenic
TTCACGCGCCACCCGCATGG+AGG 0.601818 3.4:-86277505 None:intergenic
TTATGGCTACGTCGTCTGGG+AGG 0.604755 3.4:-86277134 None:intergenic
AAACGAGGGTGAGGGTTGTG+TGG 0.611470 3.4:-86277185 None:intergenic
GTGGTGGATGACAGCGTAAG+CGG 0.611973 3.4:-86277391 None:intergenic
CCACCCGCATGGAGGGACCG+GGG 0.612009 3.4:-86277497 None:intergenic
GTAGCCCCACACAGAAACCT+TGG 0.612328 3.4:-86277924 None:intergenic
TTGATGTGAAGAAAGGGTTG+TGG 0.612357 3.4:+86277871 MS.gene013385:CDS
GACGGGAAAATCTACGTCAT+CGG 0.619777 3.4:+86277549 MS.gene013385:CDS
GCGGAGCCGATTGTAGGGGA+AGG 0.620894 3.4:-86277372 None:intergenic
GAGACGGTGGTTATTGTGGA+GGG 0.624293 3.4:-86277331 None:intergenic
GGGTTGTGGAAGGAGTTGAA+AGG 0.624861 3.4:+86277885 MS.gene013385:CDS
TGATCCTTATAATGGAGCGT+GGG 0.625550 3.4:+86277749 MS.gene013385:CDS
TTGATCCTTATAATGGAGCG+TGG 0.628287 3.4:+86277748 MS.gene013385:CDS
AGGATCCATACATGACGAGA+TGG 0.628694 3.4:-86277450 None:intergenic
ATTTGAATGCAAATAAGAAG+GGG 0.632620 3.4:+86277997 MS.gene013385:CDS
GGGAAAATCTACGTCATCGG+TGG 0.638696 3.4:+86277552 MS.gene013385:CDS
GGAAGGGATGAGAGAGCGAG+CGG 0.643411 3.4:-86277250 None:intergenic
GCGCGGGAGAGCAACTGTTG+TGG 0.648340 3.4:+86277803 MS.gene013385:CDS
TACGCGATGGCGGATCGCGG+TGG 0.651378 3.4:+86277717 MS.gene013385:CDS
AACAGAAGAACAATGAACAA+TGG 0.652676 3.4:-86278138 None:intergenic
GTTTACGCGATGGCGGATCG+CGG 0.654239 3.4:+86277714 MS.gene013385:CDS
TGTGAAGAAAGGGTTGTGGA+AGG 0.655527 3.4:+86277875 MS.gene013385:CDS
AGACGGCAAAGTTTACGCGA+TGG 0.658808 3.4:+86277704 MS.gene013385:CDS
GGGTTGTGTGGTGAGAGCGT+GGG 0.659765 3.4:-86277173 None:intergenic
CGGCAAAGTTTACGCGATGG+CGG 0.661397 3.4:+86277707 MS.gene013385:CDS
CGTTGACTGAACCACCAATG+AGG 0.671117 3.4:-86277422 None:intergenic
GAAATGGATGCACGCTAGCG+CGG 0.679178 3.4:+86277677 MS.gene013385:CDS
AGTTTACCAAGGTTTCTGTG+TGG 0.681635 3.4:+86277918 MS.gene013385:CDS
GTTTGGATAAGAGTTTACCA+AGG 0.687199 3.4:+86277907 MS.gene013385:CDS
GACTAGGAACACTTTCCCAG+CGG 0.689950 3.4:-86277638 None:intergenic
GTAAGCGGAGCCGATTGTAG+GGG 0.695680 3.4:-86277376 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTGAATGCAAATAAGAA+GGG + chr3.4:86277996-86278015 MS.gene013385:CDS 20.0%
!! GATTATTTAGGGAAAATTAA+GGG + chr3.4:86277846-86277865 MS.gene013385:CDS 20.0%
!! TGATTATTTAGGGAAAATTA+AGG + chr3.4:86277845-86277864 MS.gene013385:CDS 20.0%
!! TGTATTGCTATGATTATTTA+GGG + chr3.4:86277835-86277854 MS.gene013385:CDS 20.0%
!! TTGTATTGCTATGATTATTT+AGG + chr3.4:86277834-86277853 MS.gene013385:CDS 20.0%
! ATTTGAATGCAAATAAGAAG+GGG + chr3.4:86277997-86278016 MS.gene013385:CDS 25.0%
! GAATTTGAATGCAAATAAGA+AGG + chr3.4:86277995-86278014 MS.gene013385:CDS 25.0%
!!! GTTTTGTTTGATCCTTATAA+TGG + chr3.4:86277741-86277760 MS.gene013385:CDS 25.0%
AAATAAGAAGGGGAAAGAAA+TGG + chr3.4:86278007-86278026 MS.gene013385:CDS 30.0%
AACAAGAAGAAGAATAAGGA+TGG + chr3.4:86278056-86278075 MS.gene013385:CDS 30.0%
AACAGAAGAACAATGAACAA+TGG - chr3.4:86278141-86278160 None:intergenic 30.0%
AATGTTCTTTCTGTTCCTAA+AGG + chr3.4:86278110-86278129 MS.gene013385:CDS 30.0%
ACAAGAAGAAGAATAAGGAT+GGG + chr3.4:86278057-86278076 MS.gene013385:CDS 30.0%
TGTGAACAAGAAGAAGAATA+AGG + chr3.4:86278052-86278071 MS.gene013385:CDS 30.0%
AATAAGGATGGGGAATTATG+GGG + chr3.4:86278068-86278087 MS.gene013385:CDS 35.0%
AATTATGGGGTGAAGTTTGT+TGG + chr3.4:86278081-86278100 MS.gene013385:CDS 35.0%
AGAATAAGGATGGGGAATTA+TGG + chr3.4:86278066-86278085 MS.gene013385:CDS 35.0%
ATCCATTTCTCACGAATTTC+TGG - chr3.4:86277666-86277685 None:intergenic 35.0%
CAAGAAGAAGAATAAGGATG+GGG + chr3.4:86278058-86278077 MS.gene013385:CDS 35.0%
GAATAAGGATGGGGAATTAT+GGG + chr3.4:86278067-86278086 MS.gene013385:CDS 35.0%
GTTTGGATAAGAGTTTACCA+AGG + chr3.4:86277907-86277926 MS.gene013385:CDS 35.0%
TGAACAATGGAAGATCCTTT+AGG - chr3.4:86278128-86278147 None:intergenic 35.0%
! GTTTTTCCAGATCAGCAAAT+TGG + chr3.4:86277589-86277608 MS.gene013385:CDS 35.0%
!! AAGGGTTTTGATGTGAAGAA+AGG + chr3.4:86277864-86277883 MS.gene013385:CDS 35.0%
!! AGGGTTTTGATGTGAAGAAA+GGG + chr3.4:86277865-86277884 MS.gene013385:CDS 35.0%
AGGGGAAAGAAATGGAGATT+TGG + chr3.4:86278015-86278034 MS.gene013385:CDS 40.0%
AGTTTACCAAGGTTTCTGTG+TGG + chr3.4:86277918-86277937 MS.gene013385:CDS 40.0%
ATGTACCATCTCGTCATGTA+TGG + chr3.4:86277445-86277464 MS.gene013385:CDS 40.0%
CACAAAATCTACCTCATTGG+TGG + chr3.4:86277411-86277430 MS.gene013385:CDS 40.0%
CACCACAAAATCTACCTCAT+TGG + chr3.4:86277408-86277427 MS.gene013385:CDS 40.0%
CACCAGAAATTCGTGAGAAA+TGG + chr3.4:86277661-86277680 MS.gene013385:CDS 40.0%
GCTGATCTGGAAAAACTATC+CGG - chr3.4:86277585-86277604 None:intergenic 40.0%
GTTTACCAAGGTTTCTGTGT+GGG + chr3.4:86277919-86277938 MS.gene013385:CDS 40.0%
TATTGTGGAGGGTGAAGAAT+TGG - chr3.4:86277323-86277342 None:intergenic 40.0%
TGGGAAATTGGTTGTGGTTT+GGG + chr3.4:86277962-86277981 MS.gene013385:CDS 40.0%
TTCCAGATCAGCAAATTGGT+CGG + chr3.4:86277593-86277612 MS.gene013385:CDS 40.0%
TTGATGTGAAGAAAGGGTTG+TGG + chr3.4:86277871-86277890 MS.gene013385:CDS 40.0%
TTTACCAAGGTTTCTGTGTG+GGG + chr3.4:86277920-86277939 MS.gene013385:CDS 40.0%
! CAATGAGGTAGATTTTGTGG+TGG - chr3.4:86277410-86277429 None:intergenic 40.0%
! CACCAATGAGGTAGATTTTG+TGG - chr3.4:86277413-86277432 None:intergenic 40.0%
! CATTTCTCACGAATTTCTGG+TGG - chr3.4:86277663-86277682 None:intergenic 40.0%
! TGATCCTTATAATGGAGCGT+GGG + chr3.4:86277749-86277768 MS.gene013385:CDS 40.0%
! TTGATCCTTATAATGGAGCG+TGG + chr3.4:86277748-86277767 MS.gene013385:CDS 40.0%
!! AATGGATTGGTTTGGAAACG+AGG - chr3.4:86277203-86277222 None:intergenic 40.0%
!! ATGGATTGGTTTGGAAACGA+GGG - chr3.4:86277202-86277221 None:intergenic 40.0%
!! ATGGGATCAGGTTTGAGTTT+TGG - chr3.4:86277113-86277132 None:intergenic 40.0%
AGAGAGGTAGAGGATGTGTT+GGG - chr3.4:86277277-86277296 None:intergenic 45.0%
AGGATCCATACATGACGAGA+TGG - chr3.4:86277453-86277472 None:intergenic 45.0%
AGTTTATGGCTACGTCGTCT+GGG - chr3.4:86277140-86277159 None:intergenic 45.0%
CTACAATGGCTGATGTTGGT+GGG + chr3.4:86277943-86277962 MS.gene013385:CDS 45.0%
GAAGAGAGGAGAGAATGGAT+TGG - chr3.4:86277216-86277235 None:intergenic 45.0%
GACGGGAAAATCTACGTCAT+CGG + chr3.4:86277549-86277568 MS.gene013385:CDS 45.0%
GTGGAAGGAGTTGAAAGGTT+TGG + chr3.4:86277890-86277909 MS.gene013385:CDS 45.0%
GTGGGAAATTGGTTGTGGTT+TGG + chr3.4:86277961-86277980 MS.gene013385:CDS 45.0%
TAGCCATAAACTGCCTTGCA+CGG + chr3.4:86277148-86277167 MS.gene013385:CDS 45.0%
TGAAGAAGAGTGGAGAAGAG+AGG - chr3.4:86277230-86277249 None:intergenic 45.0%
TGTGAAGAAAGGGTTGTGGA+AGG + chr3.4:86277875-86277894 MS.gene013385:CDS 45.0%
! TGTTGGTGGGAAATTGGTTG+TGG + chr3.4:86277956-86277975 MS.gene013385:CDS 45.0%
!! GAGGAGAGAATGGATTGGTT+TGG - chr3.4:86277211-86277230 None:intergenic 45.0%
!! TCACGAATTTCTGGTGGACT+AGG - chr3.4:86277657-86277676 None:intergenic 45.0%
!! TTGTGGTTTGGGAGTGTCAA+AGG + chr3.4:86277973-86277992 MS.gene013385:CDS 45.0%
AGACGGCAAAGTTTACGCGA+TGG + chr3.4:86277704-86277723 MS.gene013385:CDS 50.0%
AGAGGATGTGTTGGGTGGAA+GGG - chr3.4:86277269-86277288 None:intergenic 50.0%
AGCCATAAACTGCCTTGCAC+GGG + chr3.4:86277149-86277168 MS.gene013385:CDS 50.0%
ATTGTAGGGGAAGGAAGAGG+AGG - chr3.4:86277366-86277385 None:intergenic 50.0%
CAGATCAGCAAATTGGTCGG+AGG + chr3.4:86277596-86277615 MS.gene013385:CDS 50.0%
CAGTTTATGGCTACGTCGTC+TGG - chr3.4:86277141-86277160 None:intergenic 50.0%
CCTCTTCCTTCCCCTACAAT+CGG + chr3.4:86277366-86277385 MS.gene013385:CDS 50.0%
CTCTCCCACGCTCCATTATA+AGG - chr3.4:86277756-86277775 None:intergenic 50.0%
GAAGGAGACGGTGGTTATTG+TGG - chr3.4:86277338-86277357 None:intergenic 50.0%
GACTAGGAACACTTTCCCAG+CGG - chr3.4:86277641-86277660 None:intergenic 50.0%
GAGACGGTGGTTATTGTGGA+GGG - chr3.4:86277334-86277353 None:intergenic 50.0%
GAGAGAGGTAGAGGATGTGT+TGG - chr3.4:86277278-86277297 None:intergenic 50.0%
GAGGGTGAAGAATTGGAGAG+AGG - chr3.4:86277316-86277335 None:intergenic 50.0%
GCTACAATGGCTGATGTTGG+TGG + chr3.4:86277942-86277961 MS.gene013385:CDS 50.0%
GGAGAGCAACTGTTGTGGAT+GGG + chr3.4:86277808-86277827 MS.gene013385:CDS 50.0%
GGAGGGAGCTTGATTTAGGT+TGG + chr3.4:86277781-86277800 MS.gene013385:CDS 50.0%
GGGAAAATCTACGTCATCGG+TGG + chr3.4:86277552-86277571 MS.gene013385:CDS 50.0%
GGGTTGTGGAAGGAGTTGAA+AGG + chr3.4:86277885-86277904 MS.gene013385:CDS 50.0%
GGTGAAGAATTGGAGAGAGG+TGG - chr3.4:86277313-86277332 None:intergenic 50.0%
GTGGAGAAGAGAGGAGAGAA+TGG - chr3.4:86277221-86277240 None:intergenic 50.0%
GTTGGGAGGGAGCTTGATTT+AGG + chr3.4:86277777-86277796 MS.gene013385:CDS 50.0%
GTTTCTGTGTGGGGCTACAA+TGG + chr3.4:86277929-86277948 MS.gene013385:CDS 50.0%
TAGAGGATGTGTTGGGTGGA+AGG - chr3.4:86277270-86277289 None:intergenic 50.0%
TTGTAGGGGAAGGAAGAGGA+GGG - chr3.4:86277365-86277384 None:intergenic 50.0%
! CGTTGACTGAACCACCAATG+AGG - chr3.4:86277425-86277444 None:intergenic 50.0%
! GGCTGATGTTGGTGGGAAAT+TGG + chr3.4:86277950-86277969 MS.gene013385:CDS 50.0%
! TGGTTTGGAAACGAGGGTGA+GGG - chr3.4:86277196-86277215 None:intergenic 50.0%
!! AGCTTGATTTAGGTTGGCGC+GGG + chr3.4:86277787-86277806 MS.gene013385:CDS 50.0%
!! CTCCGACCAATTTGCTGATC+TGG - chr3.4:86277598-86277617 None:intergenic 50.0%
!! GAGCTTGATTTAGGTTGGCG+CGG + chr3.4:86277786-86277805 MS.gene013385:CDS 50.0%
!! TTGGTTTGGAAACGAGGGTG+AGG - chr3.4:86277197-86277216 None:intergenic 50.0%
AAACGAGGGTGAGGGTTGTG+TGG - chr3.4:86277188-86277207 None:intergenic 55.0%
AAGGAAGAGGAGGGAGAGGA+AGG - chr3.4:86277356-86277375 None:intergenic 55.0%
AGCGGTGGAATCGGCAATCA+AGG - chr3.4:86277473-86277492 None:intergenic 55.0%
AGGAACACTTTCCCAGCGGT+TGG - chr3.4:86277637-86277656 None:intergenic 55.0%
CCGATTGTAGGGGAAGGAAG+AGG - chr3.4:86277369-86277388 None:intergenic 55.0%
CGATCCTGTTACCAACCGCT+GGG + chr3.4:86277623-86277642 MS.gene013385:CDS 55.0%
CGGCAAAGTTTACGCGATGG+CGG + chr3.4:86277707-86277726 MS.gene013385:CDS 55.0%
CGTAAGCGGAGCCGATTGTA+GGG - chr3.4:86277380-86277399 None:intergenic 55.0%
GAAATGGATGCACGCTAGCG+CGG + chr3.4:86277677-86277696 MS.gene013385:CDS 55.0%
GACCCGTGCAAGGCAGTTTA+TGG - chr3.4:86277154-86277173 None:intergenic 55.0%
GAGGTAGAGGATGTGTTGGG+TGG - chr3.4:86277274-86277293 None:intergenic 55.0%
GGAGACGGTGGTTATTGTGG+AGG - chr3.4:86277335-86277354 None:intergenic 55.0%
GGGAGAGCAACTGTTGTGGA+TGG + chr3.4:86277807-86277826 MS.gene013385:CDS 55.0%
GGGGCTACAATGGCTGATGT+TGG + chr3.4:86277939-86277958 MS.gene013385:CDS 55.0%
GTAAGCGGAGCCGATTGTAG+GGG - chr3.4:86277379-86277398 None:intergenic 55.0%
GTAGCCCCACACAGAAACCT+TGG - chr3.4:86277927-86277946 None:intergenic 55.0%
TATGGCTACGTCGTCTGGGA+GGG - chr3.4:86277136-86277155 None:intergenic 55.0%
TCGATCCTGTTACCAACCGC+TGG + chr3.4:86277622-86277641 MS.gene013385:CDS 55.0%
TTATGGCTACGTCGTCTGGG+AGG - chr3.4:86277137-86277156 None:intergenic 55.0%
!! CAGCTGCTGGTGTTATCGAC+GGG + chr3.4:86277532-86277551 MS.gene013385:CDS 55.0%
!! CTTTCCCAGCGGTTGGTAAC+AGG - chr3.4:86277630-86277649 None:intergenic 55.0%
!! GCAGCTGCTGGTGTTATCGA+CGG + chr3.4:86277531-86277550 MS.gene013385:CDS 55.0%
!! GTGGTGGATGACAGCGTAAG+CGG - chr3.4:86277394-86277413 None:intergenic 55.0%
!! TTGATTGCCGATTCCACCGC+TGG + chr3.4:86277472-86277491 MS.gene013385:CDS 55.0%
AGGGTTGTGTGGTGAGAGCG+TGG - chr3.4:86277177-86277196 None:intergenic 60.0%
CTACGTCGTCTGGGAGGGAT+GGG - chr3.4:86277131-86277150 None:intergenic 60.0%
GAGCGAGCGGTGAAGAAGAG+TGG - chr3.4:86277240-86277259 None:intergenic 60.0%
GAGGAGGGAGAGGAAGGAGA+CGG - chr3.4:86277350-86277369 None:intergenic 60.0%
GCGTAAGCGGAGCCGATTGT+AGG - chr3.4:86277381-86277400 None:intergenic 60.0%
GGAAGGGATGAGAGAGCGAG+CGG - chr3.4:86277253-86277272 None:intergenic 60.0%
GTGTGCGGAGAGAGAGGTAG+AGG - chr3.4:86277287-86277306 None:intergenic 60.0%
! AATGGAGCGTGGGAGAGCGT+TGG + chr3.4:86277759-86277778 MS.gene013385:CDS 60.0%
! GGGTTGTGTGGTGAGAGCGT+GGG - chr3.4:86277176-86277195 None:intergenic 60.0%
!! ATGGAGCGTGGGAGAGCGTT+GGG + chr3.4:86277760-86277779 MS.gene013385:CDS 60.0%
!! GTTTACGCGATGGCGGATCG+CGG + chr3.4:86277714-86277733 MS.gene013385:CDS 60.0%
CACGCTAGCGCGGTCGTAGA+CGG + chr3.4:86277687-86277706 MS.gene013385:CDS 65.0%
CGTCATCGGTGGTTGCGTGC+CGG + chr3.4:86277563-86277582 MS.gene013385:CDS 65.0%
CGTCTGGGAGGGATGGGATC+AGG - chr3.4:86277125-86277144 None:intergenic 65.0%
GAATTCACGCGCCACCCGCA+TGG - chr3.4:86277511-86277530 None:intergenic 65.0%
GAGGGAGAGGAAGGAGACGG+TGG - chr3.4:86277347-86277366 None:intergenic 65.0%
GCGCGGGAGAGCAACTGTTG+TGG + chr3.4:86277803-86277822 MS.gene013385:CDS 65.0%
GCGCGTGAATTCGCAGCTGC+TGG + chr3.4:86277519-86277538 MS.gene013385:CDS 65.0%
GCGGAGCCGATTGTAGGGGA+AGG - chr3.4:86277375-86277394 None:intergenic 65.0%
GCTACGTCGTCTGGGAGGGA+TGG - chr3.4:86277132-86277151 None:intergenic 65.0%
GGAGAGAGGTGGAGCGTGTG+CGG - chr3.4:86277302-86277321 None:intergenic 65.0%
GGGGAAGGAAGAGGAGGGAG+AGG - chr3.4:86277360-86277379 None:intergenic 65.0%
TGGAGCGTGTGCGGAGAGAG+AGG - chr3.4:86277293-86277312 None:intergenic 65.0%
!! AGCGTGGGAGAGCGTTGGGA+GGG + chr3.4:86277764-86277783 MS.gene013385:CDS 65.0%
CGGGGAGCCAGCGGTGGAAT+CGG - chr3.4:86277482-86277501 None:intergenic 70.0%
TCACGCGCCACCCGCATGGA+GGG - chr3.4:86277507-86277526 None:intergenic 70.0%
TTCACGCGCCACCCGCATGG+AGG - chr3.4:86277508-86277527 None:intergenic 70.0%
! GAGAGCGTGGGACCCGTGCA+AGG - chr3.4:86277164-86277183 None:intergenic 70.0%
!! CGATTCCACCGCTGGCTCCC+CGG + chr3.4:86277480-86277499 MS.gene013385:CDS 70.0%
!! GAGCGTGGGAGAGCGTTGGG+AGG + chr3.4:86277763-86277782 MS.gene013385:CDS 70.0%
!! TACGCGATGGCGGATCGCGG+TGG + chr3.4:86277717-86277736 MS.gene013385:CDS 70.0%
CCACCCGCATGGAGGGACCG+GGG - chr3.4:86277500-86277519 None:intergenic 75.0%
CGCCACCCGCATGGAGGGAC+CGG - chr3.4:86277502-86277521 None:intergenic 75.0%
GCCACCCGCATGGAGGGACC+GGG - chr3.4:86277501-86277520 None:intergenic 75.0%
GCTCCCCGGTCCCTCCATGC+GGG + chr3.4:86277494-86277513 MS.gene013385:CDS 75.0%
GGCTCCCCGGTCCCTCCATG+CGG + chr3.4:86277493-86277512 MS.gene013385:CDS 75.0%
TGGAGGGACCGGGGAGCCAG+CGG - chr3.4:86277491-86277510 None:intergenic 75.0%
! AGGGACCGGGGAGCCAGCGG+TGG - chr3.4:86277488-86277507 None:intergenic 80.0%
! CCCCGGTCCCTCCATGCGGG+TGG + chr3.4:86277497-86277516 MS.gene013385:CDS 80.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 86277099 86278169 86277099 ID=MS.gene013385
chr3.4 mRNA 86277099 86278169 86277099 ID=MS.gene013385.t1;Parent=MS.gene013385
chr3.4 exon 86277099 86278169 86277099 ID=MS.gene013385.t1.exon1;Parent=MS.gene013385.t1
chr3.4 CDS 86277099 86278169 86277099 ID=cds.MS.gene013385.t1;Parent=MS.gene013385.t1
Gene Sequence

>MS.gene013385

ATGAAGAAGAACCAAAACTCAAACCTGATCCCATCCCTCCCAGACGACGTAGCCATAAACTGCCTTGCACGGGTCCCACGCTCTCACCACACAACCCTCACCCTCGTTTCCAAACCAATCCATTCTCTCCTCTCTTCTCCACTCTTCTTCACCGCTCGCTCTCTCATCCCTTCCACCCAACACATCCTCTACCTCTCTCTCCGCACACGCTCCACCTCTCTCCAATTCTTCACCCTCCACAATAACCACCGTCTCCTTCCTCTCCCTCCTCTTCCTTCCCCTACAATCGGCTCCGCTTACGCTGTCATCCACCACAAAATCTACCTCATTGGTGGTTCAGTCAACGATGTACCATCTCGTCATGTATGGATCCTTGATTGCCGATTCCACCGCTGGCTCCCCGGTCCCTCCATGCGGGTGGCGCGTGAATTCGCAGCTGCTGGTGTTATCGACGGGAAAATCTACGTCATCGGTGGTTGCGTGCCGGATAGTTTTTCCAGATCAGCAAATTGGTCGGAGGTTTTCGATCCTGTTACCAACCGCTGGGAAAGTGTTCCTAGTCCACCAGAAATTCGTGAGAAATGGATGCACGCTAGCGCGGTCGTAGACGGCAAAGTTTACGCGATGGCGGATCGCGGTGGTGTTTTGTTTGATCCTTATAATGGAGCGTGGGAGAGCGTTGGGAGGGAGCTTGATTTAGGTTGGCGCGGGAGAGCAACTGTTGTGGATGGGATTTTGTATTGCTATGATTATTTAGGGAAAATTAAGGGTTTTGATGTGAAGAAAGGGTTGTGGAAGGAGTTGAAAGGTTTGGATAAGAGTTTACCAAGGTTTCTGTGTGGGGCTACAATGGCTGATGTTGGTGGGAAATTGGTTGTGGTTTGGGAGTGTCAAAGGAATTTGAATGCAAATAAGAAGGGGAAAGAAATGGAGATTTGGTGTGCTGAGATTGATGTGAACAAGAAGAAGAATAAGGATGGGGAATTATGGGGTGAAGTTTGTTGGTTGAATAATGTTCTTTCTGTTCCTAAAGGATCTTCCATTGTTCATTGTTCTTCTGTTGCATTATGA
Protein sequence

>MS.gene013385.t1

MKKNQNSNLIPSLPDDVAINCLARVPRSHHTTLTLVSKPIHSLLSSPLFFTARSLIPSTQHILYLSLRTRSTSLQFFTLHNNHRLLPLPPLPSPTIGSAYAVIHHKIYLIGGSVNDVPSRHVWILDCRFHRWLPGPSMRVAREFAAAGVIDGKIYVIGGCVPDSFSRSANWSEVFDPVTNRWESVPSPPEIREKWMHASAVVDGKVYAMADRGGVLFDPYNGAWESVGRELDLGWRGRATVVDGILYCYDYLGKIKGFDVKKGLWKELKGLDKSLPRFLCGATMADVGGKLVVVWECQRNLNANKKGKEMEIWCAEIDVNKKKNKDGELWGEVCWLNNVLSVPKGSSIVHCSSVAL