Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073014.t1 | XP_003603538.1 | 90.7 | 246 | 18 | 2 | 1 | 245 | 1 | 242 | 9.50E-126 | 459.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073014.t1 | Q8LAW2 | 47.4 | 253 | 121 | 4 | 5 | 245 | 16 | 268 | 4.9e-62 | 239.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073014.t1 | G7JCD6 | 90.7 | 246 | 18 | 2 | 1 | 245 | 1 | 242 | 6.9e-126 | 459.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene049362 | MS.gene073014 | PPI |
| MS.gene31040 | MS.gene073014 | PPI |
| MS.gene06482 | MS.gene073014 | PPI |
| MS.gene073014 | MS.gene013385 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073014.t1 | MTR_3g108860 | 90.650 | 246 | 18 | 2 | 1 | 245 | 1 | 242 | 1.14e-161 | 451 |
| MS.gene073014.t1 | MTR_2g019230 | 35.448 | 268 | 149 | 5 | 1 | 245 | 29 | 295 | 2.91e-53 | 177 |
| MS.gene073014.t1 | MTR_4g114110 | 25.000 | 252 | 169 | 6 | 6 | 243 | 70 | 315 | 1.91e-19 | 87.0 |
| MS.gene073014.t1 | MTR_7g095220 | 29.730 | 222 | 116 | 6 | 16 | 208 | 3 | 213 | 3.77e-17 | 79.7 |
| MS.gene073014.t1 | MTR_3g085570 | 25.100 | 251 | 154 | 8 | 11 | 238 | 29 | 268 | 6.77e-17 | 79.3 |
| MS.gene073014.t1 | MTR_8g030940 | 24.597 | 248 | 159 | 8 | 17 | 245 | 25 | 263 | 2.25e-16 | 77.8 |
| MS.gene073014.t1 | MTR_8g085600 | 24.609 | 256 | 167 | 6 | 5 | 243 | 65 | 311 | 4.11e-16 | 77.4 |
| MS.gene073014.t1 | MTR_8g080370 | 24.615 | 260 | 160 | 9 | 4 | 238 | 36 | 284 | 7.38e-14 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073014.t1 | AT2G24540 | 47.036 | 253 | 122 | 3 | 5 | 245 | 16 | 268 | 2.69e-78 | 241 |
| MS.gene073014.t1 | AT1G30090 | 36.719 | 256 | 145 | 4 | 6 | 245 | 42 | 296 | 2.33e-50 | 169 |
| MS.gene073014.t1 | AT1G67480 | 27.193 | 228 | 133 | 6 | 6 | 211 | 28 | 244 | 1.10e-18 | 84.3 |
| MS.gene073014.t1 | AT1G67480 | 27.193 | 228 | 133 | 6 | 6 | 211 | 28 | 244 | 1.10e-18 | 84.3 |
| MS.gene073014.t1 | AT1G67480 | 27.193 | 228 | 133 | 6 | 6 | 211 | 28 | 244 | 1.10e-18 | 84.3 |
| MS.gene073014.t1 | AT1G55270 | 25.591 | 254 | 167 | 6 | 5 | 243 | 66 | 312 | 2.24e-17 | 80.9 |
| MS.gene073014.t1 | AT3G61350 | 23.864 | 264 | 170 | 8 | 2 | 245 | 3 | 255 | 2.86e-16 | 77.4 |
| MS.gene073014.t1 | AT3G61350 | 23.864 | 264 | 170 | 8 | 2 | 245 | 3 | 255 | 2.86e-16 | 77.4 |
| MS.gene073014.t1 | AT3G63220 | 28.866 | 194 | 103 | 7 | 17 | 184 | 11 | 195 | 1.38e-14 | 72.4 |
| MS.gene073014.t1 | AT3G63220 | 28.866 | 194 | 103 | 7 | 17 | 184 | 11 | 195 | 1.38e-14 | 72.4 |
| MS.gene073014.t1 | AT3G63220 | 28.866 | 194 | 103 | 7 | 17 | 184 | 4 | 188 | 1.42e-14 | 72.4 |
| MS.gene073014.t1 | AT1G22040 | 24.918 | 305 | 160 | 8 | 6 | 243 | 32 | 334 | 7.02e-14 | 70.9 |
| MS.gene073014.t1 | AT1G16250 | 26.667 | 195 | 114 | 5 | 15 | 185 | 6 | 195 | 7.18e-14 | 70.5 |
| MS.gene073014.t1 | AT1G16250 | 26.667 | 195 | 114 | 5 | 15 | 185 | 6 | 195 | 7.18e-14 | 70.5 |
| MS.gene073014.t1 | AT2G44130 | 25.641 | 273 | 151 | 9 | 12 | 235 | 14 | 283 | 2.93e-12 | 65.9 |
Find 77 sgRNAs with CRISPR-Local
Find 82 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTCCACGTGTCACTTTC+CGG | 0.157848 | 3.4:-94287112 | None:intergenic |
| TAAAGATTGCCATTGGATTT+TGG | 0.198751 | 3.4:-94286819 | None:intergenic |
| GATTTACCGGTGATCATTTC+CGG | 0.241893 | 3.4:-94287019 | None:intergenic |
| TACGCTCTGTTTCTTCTTCA+TGG | 0.245069 | 3.4:+94286699 | MS.gene073014:CDS |
| TTCGCGGCAGAGAAAGTTAA+AGG | 0.307053 | 3.4:+94287046 | MS.gene073014:CDS |
| GAAGATAGGTGCAAAATTTA+CGG | 0.323814 | 3.4:+94287129 | MS.gene073014:CDS |
| GAGCGTACTAAAGGTTGATA+TGG | 0.325650 | 3.4:-94286683 | None:intergenic |
| CAAATCTCTGCTATTTCGTT+TGG | 0.329579 | 3.4:-94286641 | None:intergenic |
| TCTTCCACGTGTCACTTTCC+GGG | 0.348764 | 3.4:-94287111 | None:intergenic |
| GAGCATGAAGAACTTATTCC+AGG | 0.356307 | 3.4:+94286614 | MS.gene073014:CDS |
| GGTGGTGGCCGTTTGCAGTT+AGG | 0.382464 | 3.4:+94287212 | MS.gene073014:CDS |
| GAAAGTGACACGTGGAAGAT+AGG | 0.385797 | 3.4:+94287115 | MS.gene073014:CDS |
| TATTGACAGCTAAAACAAAA+AGG | 0.392366 | 3.4:-94286787 | None:intergenic |
| TGCAGTTAGGCCGAGAGGTT+GGG | 0.429553 | 3.4:+94287225 | MS.gene073014:CDS |
| AAGATAGGTGCAAAATTTAC+GGG | 0.436440 | 3.4:+94287130 | MS.gene073014:CDS |
| GGAATGAAAGACGGTTGGAC+AGG | 0.439859 | 3.4:+94287289 | MS.gene073014:CDS |
| TAGATCCTTCTTCTAGCCGT+TGG | 0.444297 | 3.4:+94286840 | MS.gene073014:CDS |
| TTGCAGTTAGGCCGAGAGGT+TGG | 0.449714 | 3.4:+94287224 | MS.gene073014:CDS |
| GCTATTTCGTTTGGTAAACC+TGG | 0.453394 | 3.4:-94286632 | None:intergenic |
| CACCGTCGACCATTTGTTAA+CGG | 0.453716 | 3.4:-94286996 | None:intergenic |
| AGGTATGAGACGGTGGTTAA+CGG | 0.455533 | 3.4:+94287163 | MS.gene073014:CDS |
| TCCGCTTCGTTGCCGCGTCA+CGG | 0.464677 | 3.4:+94286920 | MS.gene073014:CDS |
| TTCTTGGAGAGTAGAAAAGA+AGG | 0.476195 | 3.4:-94286740 | None:intergenic |
| TACTCAGAAAATGGCGATTG+TGG | 0.477617 | 3.4:+94286568 | None:intergenic |
| ACGGTTGGTGAGAGCGGGAC+GGG | 0.480257 | 3.4:+94287079 | MS.gene073014:CDS |
| ACCGCACCACCGTTAACAAA+TGG | 0.481027 | 3.4:+94286987 | MS.gene073014:CDS |
| TAACAAATGGTCGACGGTGC+CGG | 0.485171 | 3.4:+94287000 | MS.gene073014:CDS |
| TGCCGCGAAGAATGATTTAC+CGG | 0.486129 | 3.4:-94287032 | None:intergenic |
| TCTTGGAGAGTAGAAAAGAA+GGG | 0.498352 | 3.4:-94286739 | None:intergenic |
| GAAGCGGAGGTGAAGGAGGT+TGG | 0.504773 | 3.4:-94286905 | None:intergenic |
| AAGGATCTAAAGATTGCCAT+TGG | 0.508749 | 3.4:-94286826 | None:intergenic |
| TCGTTTAAGAGAGGCATATG+AGG | 0.521703 | 3.4:-94286872 | None:intergenic |
| GCGGTAAACGAATGTCGAAC+TGG | 0.525550 | 3.4:-94286969 | None:intergenic |
| GAAGAAACAGAGCGTACTAA+AGG | 0.528743 | 3.4:-94286692 | None:intergenic |
| CGGCAACGAAGCGGAGGTGA+AGG | 0.531861 | 3.4:-94286912 | None:intergenic |
| TCGTGACGGTTGGTGAGAGC+GGG | 0.534842 | 3.4:+94287074 | MS.gene073014:CDS |
| ATAAACCAACGGCTAGAAGA+AGG | 0.536971 | 3.4:-94286845 | None:intergenic |
| AAGAATATCTTTCCGTGACG+CGG | 0.542517 | 3.4:-94286932 | None:intergenic |
| ACTAAAGGTTGATATGGGTA+AGG | 0.550208 | 3.4:-94286677 | None:intergenic |
| ATGAGAGAAGGAATGAAAGA+CGG | 0.553731 | 3.4:+94287280 | MS.gene073014:CDS |
| ATCGTGACGGTTGGTGAGAG+CGG | 0.553977 | 3.4:+94287073 | MS.gene073014:CDS |
| CCTCTCGGCCTAACTGCAAA+CGG | 0.554865 | 3.4:-94287220 | None:intergenic |
| GAGAAGGAATGAAAGACGGT+TGG | 0.568706 | 3.4:+94287284 | MS.gene073014:CDS |
| AGCGTACTAAAGGTTGATAT+GGG | 0.572698 | 3.4:-94286682 | None:intergenic |
| CACCGGTAAATCATTCTTCG+CGG | 0.577544 | 3.4:+94287030 | MS.gene073014:CDS |
| GAATGAAAGACGGTTGGACA+GGG | 0.578414 | 3.4:+94287290 | MS.gene073014:CDS |
| CAACGAAGCGGAGGTGAAGG+AGG | 0.592725 | 3.4:-94286909 | None:intergenic |
| GACGGTTGGTGAGAGCGGGA+CGG | 0.607968 | 3.4:+94287078 | MS.gene073014:CDS |
| AGATGTACGTAACGGAAGGA+TGG | 0.610516 | 3.4:+94287191 | MS.gene073014:CDS |
| CAGTAACCTCCAAAATCCAA+TGG | 0.611172 | 3.4:+94286810 | MS.gene073014:CDS |
| CACGGAAAGATATTCTTCAT+CGG | 0.614247 | 3.4:+94286938 | MS.gene073014:CDS |
| TCCGTGACGCGGCAACGAAG+CGG | 0.615722 | 3.4:-94286921 | None:intergenic |
| AATTCGTATACCCAACCTCT+CGG | 0.616541 | 3.4:-94287235 | None:intergenic |
| ACGTGGAGTGAGATGAGAGA+AGG | 0.616701 | 3.4:+94287268 | MS.gene073014:CDS |
| CCGTTTGCAGTTAGGCCGAG+AGG | 0.618275 | 3.4:+94287220 | MS.gene073014:CDS |
| ACGGTGCCGGAAATGATCAC+CGG | 0.625268 | 3.4:+94287013 | MS.gene073014:CDS |
| ACCATTTGTTAACGGTGGTG+CGG | 0.630509 | 3.4:-94286988 | None:intergenic |
| GGGAAGATGTACGTAACGGA+AGG | 0.632145 | 3.4:+94287187 | MS.gene073014:CDS |
| GTGACGCGGCAACGAAGCGG+AGG | 0.640558 | 3.4:-94286918 | None:intergenic |
| CAAACTGCATCGTTTAAGAG+AGG | 0.644962 | 3.4:-94286881 | None:intergenic |
| CACCGTTAACAAATGGTCGA+CGG | 0.645344 | 3.4:+94286994 | MS.gene073014:CDS |
| ATGAGACGGTGGTTAACGGA+GGG | 0.653329 | 3.4:+94287167 | MS.gene073014:CDS |
| GTTAAGGAGGTATGAGACGG+TGG | 0.653395 | 3.4:+94287156 | MS.gene073014:CDS |
| CGTCGACCATTTGTTAACGG+TGG | 0.654231 | 3.4:-94286993 | None:intergenic |
| ACGTAACGGAAGGATGGTGG+TGG | 0.655518 | 3.4:+94287197 | MS.gene073014:CDS |
| TATGAGGAAGTATAAACCAA+CGG | 0.656671 | 3.4:-94286856 | None:intergenic |
| TGTACGTAACGGAAGGATGG+TGG | 0.666986 | 3.4:+94287194 | MS.gene073014:CDS |
| CGGGACGGGAATCTACGACC+CGG | 0.669592 | 3.4:+94287093 | MS.gene073014:CDS |
| TATGAGACGGTGGTTAACGG+AGG | 0.682766 | 3.4:+94287166 | MS.gene073014:CDS |
| GGAGTTAAGGAGGTATGAGA+CGG | 0.683682 | 3.4:+94287153 | MS.gene073014:CDS |
| AATGAAAGACGGTTGGACAG+GGG | 0.686724 | 3.4:+94287291 | MS.gene073014:CDS |
| AGATAGGTGCAAAATTTACG+GGG | 0.690564 | 3.4:+94287131 | MS.gene073014:CDS |
| CGGAGGGAAGATGTACGTAA+CGG | 0.690616 | 3.4:+94287183 | MS.gene073014:CDS |
| GGAAAGATATTCTTCATCGG+AGG | 0.700314 | 3.4:+94286941 | MS.gene073014:CDS |
| ACGAATTAGAGAGTGACACG+TGG | 0.729613 | 3.4:+94287251 | MS.gene073014:CDS |
| GATAGGTGCAAAATTTACGG+GGG | 0.736944 | 3.4:+94287132 | MS.gene073014:CDS |
| ACGACCCGGAAAGTGACACG+TGG | 0.741478 | 3.4:+94287107 | MS.gene073014:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TATTGACAGCTAAAACAAAA+AGG | - | chr3.4:94286790-94286809 | None:intergenic | 25.0% |
| AAGATAGGTGCAAAATTTAC+GGG | + | chr3.4:94287130-94287149 | MS.gene073014:CDS | 30.0% | |
| AGTTAAAGGAAAAATCGTGA+CGG | + | chr3.4:94287060-94287079 | MS.gene073014:CDS | 30.0% | |
| GAAGATAGGTGCAAAATTTA+CGG | + | chr3.4:94287129-94287148 | MS.gene073014:CDS | 30.0% | |
| ! | TAAAGATTGCCATTGGATTT+TGG | - | chr3.4:94286822-94286841 | None:intergenic | 30.0% |
| ! | TATGAGGAAGTATAAACCAA+CGG | - | chr3.4:94286859-94286878 | None:intergenic | 30.0% |
| !!! | CGAAAGTGTTTTTGTTTTCT+TGG | - | chr3.4:94286759-94286778 | None:intergenic | 30.0% |
| AAGGATCTAAAGATTGCCAT+TGG | - | chr3.4:94286829-94286848 | None:intergenic | 35.0% | |
| ACAGCTAAAACAAAAAGGTG+TGG | - | chr3.4:94286785-94286804 | None:intergenic | 35.0% | |
| AGATAGGTGCAAAATTTACG+GGG | + | chr3.4:94287131-94287150 | MS.gene073014:CDS | 35.0% | |
| ATGAGAGAAGGAATGAAAGA+CGG | + | chr3.4:94287280-94287299 | MS.gene073014:CDS | 35.0% | |
| CACGGAAAGATATTCTTCAT+CGG | + | chr3.4:94286938-94286957 | MS.gene073014:CDS | 35.0% | |
| TCTTGGAGAGTAGAAAAGAA+GGG | - | chr3.4:94286742-94286761 | None:intergenic | 35.0% | |
| TTCTTGGAGAGTAGAAAAGA+AGG | - | chr3.4:94286743-94286762 | None:intergenic | 35.0% | |
| !! | ACTAAAGGTTGATATGGGTA+AGG | - | chr3.4:94286680-94286699 | None:intergenic | 35.0% |
| !! | AGCGTACTAAAGGTTGATAT+GGG | - | chr3.4:94286685-94286704 | None:intergenic | 35.0% |
| !! | CAAATCTCTGCTATTTCGTT+TGG | - | chr3.4:94286644-94286663 | None:intergenic | 35.0% |
| AAAGGAAAAATCGTGACGGT+TGG | + | chr3.4:94287064-94287083 | MS.gene073014:CDS | 40.0% | |
| AAGAATATCTTTCCGTGACG+CGG | - | chr3.4:94286935-94286954 | None:intergenic | 40.0% | |
| AATTCGTATACCCAACCTCT+CGG | - | chr3.4:94287238-94287257 | None:intergenic | 40.0% | |
| ATAAACCAACGGCTAGAAGA+AGG | - | chr3.4:94286848-94286867 | None:intergenic | 40.0% | |
| CAAAATTTACGGGGGAGTTA+AGG | + | chr3.4:94287140-94287159 | MS.gene073014:CDS | 40.0% | |
| CAAACTGCATCGTTTAAGAG+AGG | - | chr3.4:94286884-94286903 | None:intergenic | 40.0% | |
| CAGTAACCTCCAAAATCCAA+TGG | + | chr3.4:94286810-94286829 | MS.gene073014:CDS | 40.0% | |
| GAAGAAACAGAGCGTACTAA+AGG | - | chr3.4:94286695-94286714 | None:intergenic | 40.0% | |
| GAGCATGAAGAACTTATTCC+AGG | + | chr3.4:94286614-94286633 | MS.gene073014:CDS | 40.0% | |
| GATAGGTGCAAAATTTACGG+GGG | + | chr3.4:94287132-94287151 | MS.gene073014:CDS | 40.0% | |
| GATTTACCGGTGATCATTTC+CGG | - | chr3.4:94287022-94287041 | None:intergenic | 40.0% | |
| GGAAAGATATTCTTCATCGG+AGG | + | chr3.4:94286941-94286960 | MS.gene073014:CDS | 40.0% | |
| ! | AGATTGCCATTGGATTTTGG+AGG | - | chr3.4:94286819-94286838 | None:intergenic | 40.0% |
| ! | GCTATTTCGTTTGGTAAACC+TGG | - | chr3.4:94286635-94286654 | None:intergenic | 40.0% |
| ! | TACGCTCTGTTTCTTCTTCA+TGG | + | chr3.4:94286699-94286718 | MS.gene073014:CDS | 40.0% |
| ! | TCGTTTAAGAGAGGCATATG+AGG | - | chr3.4:94286875-94286894 | None:intergenic | 40.0% |
| !! | GAGCGTACTAAAGGTTGATA+TGG | - | chr3.4:94286686-94286705 | None:intergenic | 40.0% |
| AATTTACGGGGGAGTTAAGG+AGG | + | chr3.4:94287143-94287162 | MS.gene073014:CDS | 45.0% | |
| ACGAATTAGAGAGTGACACG+TGG | + | chr3.4:94287251-94287270 | MS.gene073014:CDS | 45.0% | |
| AGGTATGAGACGGTGGTTAA+CGG | + | chr3.4:94287163-94287182 | MS.gene073014:CDS | 45.0% | |
| CACCGGTAAATCATTCTTCG+CGG | + | chr3.4:94287030-94287049 | MS.gene073014:CDS | 45.0% | |
| CACCGTTAACAAATGGTCGA+CGG | + | chr3.4:94286994-94287013 | MS.gene073014:CDS | 45.0% | |
| GAAAGTGACACGTGGAAGAT+AGG | + | chr3.4:94287115-94287134 | MS.gene073014:CDS | 45.0% | |
| GAATGAAAGACGGTTGGACA+GGG | + | chr3.4:94287290-94287309 | MS.gene073014:CDS | 45.0% | |
| GAGAAGGAATGAAAGACGGT+TGG | + | chr3.4:94287284-94287303 | MS.gene073014:CDS | 45.0% | |
| TAGATCCTTCTTCTAGCCGT+TGG | + | chr3.4:94286840-94286859 | MS.gene073014:CDS | 45.0% | |
| TGCCGCGAAGAATGATTTAC+CGG | - | chr3.4:94287035-94287054 | None:intergenic | 45.0% | |
| TTCGCGGCAGAGAAAGTTAA+AGG | + | chr3.4:94287046-94287065 | MS.gene073014:CDS | 45.0% | |
| ! | ACCATTTGTTAACGGTGGTG+CGG | - | chr3.4:94286991-94287010 | None:intergenic | 45.0% |
| ! | AGATGTACGTAACGGAAGGA+TGG | + | chr3.4:94287191-94287210 | MS.gene073014:CDS | 45.0% |
| ! | CACCGTCGACCATTTGTTAA+CGG | - | chr3.4:94286999-94287018 | None:intergenic | 45.0% |
| ! | GGAGTTAAGGAGGTATGAGA+CGG | + | chr3.4:94287153-94287172 | MS.gene073014:CDS | 45.0% |
| !! | ATCTTCCACGTGTCACTTTC+CGG | - | chr3.4:94287115-94287134 | None:intergenic | 45.0% |
| ACCGCACCACCGTTAACAAA+TGG | + | chr3.4:94286987-94287006 | MS.gene073014:CDS | 50.0% | |
| ACGTGGAGTGAGATGAGAGA+AGG | + | chr3.4:94287268-94287287 | MS.gene073014:CDS | 50.0% | |
| ATGAGACGGTGGTTAACGGA+GGG | + | chr3.4:94287167-94287186 | MS.gene073014:CDS | 50.0% | |
| CGGAGGGAAGATGTACGTAA+CGG | + | chr3.4:94287183-94287202 | MS.gene073014:CDS | 50.0% | |
| GCGGTAAACGAATGTCGAAC+TGG | - | chr3.4:94286972-94286991 | None:intergenic | 50.0% | |
| GGAATGAAAGACGGTTGGAC+AGG | + | chr3.4:94287289-94287308 | MS.gene073014:CDS | 50.0% | |
| TAACAAATGGTCGACGGTGC+CGG | + | chr3.4:94287000-94287019 | MS.gene073014:CDS | 50.0% | |
| TATGAGACGGTGGTTAACGG+AGG | + | chr3.4:94287166-94287185 | MS.gene073014:CDS | 50.0% | |
| ! | CGTCGACCATTTGTTAACGG+TGG | - | chr3.4:94286996-94287015 | None:intergenic | 50.0% |
| ! | GGGAAGATGTACGTAACGGA+AGG | + | chr3.4:94287187-94287206 | MS.gene073014:CDS | 50.0% |
| ! | GTTAAGGAGGTATGAGACGG+TGG | + | chr3.4:94287156-94287175 | MS.gene073014:CDS | 50.0% |
| ! | TGTACGTAACGGAAGGATGG+TGG | + | chr3.4:94287194-94287213 | MS.gene073014:CDS | 50.0% |
| !! | TCTTCCACGTGTCACTTTCC+GGG | - | chr3.4:94287114-94287133 | None:intergenic | 50.0% |
| CCTCTCGGCCTAACTGCAAA+CGG | - | chr3.4:94287223-94287242 | None:intergenic | 55.0% | |
| TGCAGTTAGGCCGAGAGGTT+GGG | + | chr3.4:94287225-94287244 | MS.gene073014:CDS | 55.0% | |
| TTGCAGTTAGGCCGAGAGGT+TGG | + | chr3.4:94287224-94287243 | MS.gene073014:CDS | 55.0% | |
| ! | ACGGTGCCGGAAATGATCAC+CGG | + | chr3.4:94287013-94287032 | MS.gene073014:CDS | 55.0% |
| ! | ACGTAACGGAAGGATGGTGG+TGG | + | chr3.4:94287197-94287216 | MS.gene073014:CDS | 55.0% |
| !! | ATCGTGACGGTTGGTGAGAG+CGG | + | chr3.4:94287073-94287092 | MS.gene073014:CDS | 55.0% |
| ACGACCCGGAAAGTGACACG+TGG | + | chr3.4:94287107-94287126 | MS.gene073014:CDS | 60.0% | |
| CAACGAAGCGGAGGTGAAGG+AGG | - | chr3.4:94286912-94286931 | None:intergenic | 60.0% | |
| CCGTTTGCAGTTAGGCCGAG+AGG | + | chr3.4:94287220-94287239 | MS.gene073014:CDS | 60.0% | |
| GAAGCGGAGGTGAAGGAGGT+TGG | - | chr3.4:94286908-94286927 | None:intergenic | 60.0% | |
| ! | GGTGGTGGCCGTTTGCAGTT+AGG | + | chr3.4:94287212-94287231 | MS.gene073014:CDS | 60.0% |
| !! | TCGTGACGGTTGGTGAGAGC+GGG | + | chr3.4:94287074-94287093 | MS.gene073014:CDS | 60.0% |
| CGGCAACGAAGCGGAGGTGA+AGG | - | chr3.4:94286915-94286934 | None:intergenic | 65.0% | |
| CGGGACGGGAATCTACGACC+CGG | + | chr3.4:94287093-94287112 | MS.gene073014:CDS | 65.0% | |
| TCCGCTTCGTTGCCGCGTCA+CGG | + | chr3.4:94286920-94286939 | MS.gene073014:CDS | 65.0% | |
| TCCGTGACGCGGCAACGAAG+CGG | - | chr3.4:94286924-94286943 | None:intergenic | 65.0% | |
| !! | ACGGTTGGTGAGAGCGGGAC+GGG | + | chr3.4:94287079-94287098 | MS.gene073014:CDS | 65.0% |
| !! | GACGGTTGGTGAGAGCGGGA+CGG | + | chr3.4:94287078-94287097 | MS.gene073014:CDS | 65.0% |
| GTGACGCGGCAACGAAGCGG+AGG | - | chr3.4:94286921-94286940 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 94286578 | 94287312 | 94286578 | ID=MS.gene073014 |
| chr3.4 | mRNA | 94286578 | 94287312 | 94286578 | ID=MS.gene073014.t1;Parent=MS.gene073014 |
| chr3.4 | exon | 94286578 | 94287312 | 94286578 | ID=MS.gene073014.t1.exon1;Parent=MS.gene073014.t1 |
| chr3.4 | CDS | 94286578 | 94287312 | 94286578 | ID=cds.MS.gene073014.t1;Parent=MS.gene073014.t1 |
| Gene Sequence |
| Protein sequence |
