Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013510.t1 | GAU43663.1 | 90.4 | 385 | 24 | 5 | 1 | 373 | 1 | 384 | 9.90E-183 | 649.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013510.t1 | Q9S7N9 | 70.4 | 280 | 78 | 3 | 93 | 371 | 57 | 332 | 4.2e-105 | 382.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013510.t1 | A0A2Z6NNS2 | 90.4 | 385 | 24 | 5 | 1 | 373 | 1 | 384 | 7.1e-183 | 649.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene013510 | MS.gene057233 | PPI |
| MS.gene013510 | MS.gene06838 | PPI |
| MS.gene013510 | MS.gene057234 | PPI |
| MS.gene013510 | MS.gene013509 | PPI |
| MS.gene013510 | MS.gene06837 | PPI |
| MS.gene013510 | MS.gene06620 | PPI |
| MS.gene013510 | MS.gene06836 | PPI |
| MS.gene013510 | MS.gene33521 | PPI |
| MS.gene013510 | MS.gene06621 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013510.t1 | MTR_3g092510 | 97.872 | 376 | 5 | 1 | 1 | 373 | 1 | 376 | 0.0 | 764 |
| MS.gene013510.t1 | MTR_3g092550 | 77.078 | 397 | 52 | 11 | 1 | 373 | 1 | 382 | 0.0 | 581 |
| MS.gene013510.t1 | MTR_2g070540 | 63.534 | 266 | 95 | 1 | 102 | 367 | 28 | 291 | 1.54e-118 | 345 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013510.t1 | AT1G32790 | 70.833 | 288 | 78 | 3 | 90 | 373 | 71 | 356 | 6.06e-143 | 410 |
| MS.gene013510.t1 | AT4G10610 | 70.357 | 280 | 78 | 3 | 93 | 371 | 57 | 332 | 6.99e-143 | 409 |
| MS.gene013510.t1 | AT3G49390 | 58.082 | 365 | 132 | 7 | 1 | 365 | 1 | 344 | 1.03e-140 | 404 |
| MS.gene013510.t1 | AT3G49390 | 46.465 | 99 | 47 | 4 | 181 | 278 | 258 | 351 | 4.57e-14 | 73.2 |
| MS.gene013510.t1 | AT3G49390 | 58.082 | 365 | 132 | 7 | 1 | 365 | 1 | 344 | 1.03e-140 | 404 |
| MS.gene013510.t1 | AT3G49390 | 46.465 | 99 | 47 | 4 | 181 | 278 | 258 | 351 | 4.57e-14 | 73.2 |
| MS.gene013510.t1 | AT3G49390 | 58.082 | 365 | 132 | 7 | 1 | 365 | 1 | 344 | 1.03e-140 | 404 |
| MS.gene013510.t1 | AT3G49390 | 46.465 | 99 | 47 | 4 | 181 | 278 | 258 | 351 | 4.57e-14 | 73.2 |
| MS.gene013510.t1 | AT1G32790 | 69.963 | 273 | 77 | 2 | 90 | 358 | 71 | 342 | 9.58e-134 | 388 |
| MS.gene013510.t1 | AT1G32790 | 40.000 | 90 | 50 | 2 | 286 | 372 | 173 | 261 | 6.36e-12 | 67.0 |
| MS.gene013510.t1 | AT4G10610 | 69.811 | 265 | 75 | 3 | 93 | 356 | 57 | 317 | 2.69e-133 | 384 |
| MS.gene013510.t1 | AT1G53650 | 60.806 | 273 | 91 | 3 | 101 | 373 | 49 | 305 | 7.20e-117 | 342 |
| MS.gene013510.t1 | AT3G14450 | 54.194 | 310 | 121 | 4 | 70 | 367 | 19 | 319 | 1.39e-115 | 339 |
| MS.gene013510.t1 | AT1G53650 | 59.498 | 279 | 91 | 4 | 101 | 373 | 49 | 311 | 2.18e-110 | 325 |
| MS.gene013510.t1 | AT5G24440 | 48.387 | 372 | 134 | 6 | 1 | 369 | 1 | 317 | 3.10e-110 | 325 |
Find 91 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGACTTGATGAACCGATTT+TGG | 0.114098 | 3.1:+74492162 | None:intergenic |
| AAGCTGCAGTGGTGTGATTT+TGG | 0.171226 | 3.1:-74488658 | MS.gene013510:CDS |
| CGGTTCATCAAGTCAGAATT+TGG | 0.175529 | 3.1:-74492155 | MS.gene013510:CDS |
| TGAAGCTGTAATTACCATTT+TGG | 0.185564 | 3.1:+74492026 | None:intergenic |
| TGTTCAGAACCAGCAGTTTA+TGG | 0.209925 | 3.1:-74491978 | MS.gene013510:CDS |
| TTAAGAAGTATAAAATTGTT+AGG | 0.257529 | 3.1:+74491764 | None:intergenic |
| TGAAATCCAGCGAACCTTAT+AGG | 0.263840 | 3.1:+74488627 | None:intergenic |
| GACAGGTGCAATGGCAGTTT+TGG | 0.297685 | 3.1:+74490744 | None:intergenic |
| GTCCATCGACTGAGGCTTCT+TGG | 0.311133 | 3.1:-74490166 | MS.gene013510:CDS |
| TTAGCTGCTGGACCTGCTGC+TGG | 0.319582 | 3.1:-74491797 | MS.gene013510:CDS |
| TCCATACCCTACGGTTAGTT+TGG | 0.330085 | 3.1:+74491720 | None:intergenic |
| GGCAAATCGGAGAATAGAAT+TGG | 0.332888 | 3.1:+74490949 | None:intergenic |
| AGCGAATCATAAAGTGGATA+TGG | 0.334771 | 3.1:-74491568 | MS.gene013510:CDS |
| GCTGGACCTGCTGCTGGGTT+TGG | 0.337646 | 3.1:-74491791 | MS.gene013510:CDS |
| TCCATCGACTGAGGCTTCTT+GGG | 0.338255 | 3.1:-74490165 | MS.gene013510:CDS |
| TTCATTGAGTTTACAGATGA+AGG | 0.345676 | 3.1:-74490926 | MS.gene013510:intron |
| TAAGCGTGAAATGAGGGATT+TGG | 0.349931 | 3.1:-74491894 | MS.gene013510:CDS |
| TTCAACCATCAACACCAAAA+TGG | 0.363787 | 3.1:-74492040 | MS.gene013510:CDS |
| AGAAAAGAGAAGAGATGATT+AGG | 0.382555 | 3.1:-74491545 | MS.gene013510:CDS |
| GGCTGTAGGTTGTTGATTGT+CGG | 0.389761 | 3.1:-74490985 | MS.gene013510:intron |
| AGGGCTGCTGTAAGCCTGTC+TGG | 0.404077 | 3.1:-74490805 | MS.gene013510:CDS |
| CAGCTTCAAGACTCATCAAA+TGG | 0.409609 | 3.1:-74492011 | MS.gene013510:CDS |
| AAGCCTGTCTGGAACTATGC+TGG | 0.410248 | 3.1:-74490794 | MS.gene013510:CDS |
| AAGAATGGCTACACTACTAA+TGG | 0.438109 | 3.1:-74491600 | MS.gene013510:CDS |
| ATCGAAACCGAGGACCGATC+AGG | 0.441198 | 3.1:-74492083 | MS.gene013510:CDS |
| TAAGAAGTATAAAATTGTTA+GGG | 0.444999 | 3.1:+74491765 | None:intergenic |
| TTCACATCCTGATCGGTCCT+CGG | 0.451129 | 3.1:+74492076 | None:intergenic |
| GAAAATGTTGGTGCCAAAAT+CGG | 0.469626 | 3.1:-74492175 | MS.gene013510:CDS |
| TAGCTGCTGGACCTGCTGCT+GGG | 0.473262 | 3.1:-74491796 | MS.gene013510:CDS |
| TTGGAAGGCAGCACTCTCAA+TGG | 0.478989 | 3.1:+74490763 | None:intergenic |
| TAAACTCAATGAAGGCAAAT+CGG | 0.481637 | 3.1:+74490936 | None:intergenic |
| CTAGGTTACCGAAGAGCAGC+TGG | 0.486453 | 3.1:-74491383 | MS.gene013510:intron |
| GGTATGAGAAATGGTGAGAA+TGG | 0.491432 | 3.1:-74491929 | MS.gene013510:CDS |
| TTCATCTGTAAACTCAATGA+AGG | 0.492617 | 3.1:+74490928 | None:intergenic |
| TGGAAGGCAGCACTCTCAAT+GGG | 0.493363 | 3.1:+74490764 | None:intergenic |
| CAGTTTATGGTGAACAATGA+TGG | 0.493578 | 3.1:-74491965 | MS.gene013510:CDS |
| GCTGTAGGTTGTTGATTGTC+GGG | 0.497702 | 3.1:-74490984 | MS.gene013510:intron |
| GAGAGATGCCAGCTGCTCTT+CGG | 0.503624 | 3.1:+74491375 | None:intergenic |
| AGCCTGTCTGGAACTATGCT+GGG | 0.503870 | 3.1:-74490793 | MS.gene013510:CDS |
| GTGATGAATGGTATGAGAAA+TGG | 0.508297 | 3.1:-74491938 | MS.gene013510:CDS |
| GCATCTCTCTTTCTTAATTG+CGG | 0.509572 | 3.1:-74491361 | MS.gene013510:CDS |
| TGTGTCTGATATTGATCAGC+TGG | 0.511413 | 3.1:-74491511 | MS.gene013510:intron |
| AATAATTATGCTAATGCTAA+CGG | 0.512676 | 3.1:-74491743 | MS.gene013510:CDS |
| GTTTCAGTCTGAAGATGAAA+GGG | 0.512987 | 3.1:-74490590 | MS.gene013510:intron |
| TGTTTCAGTCTGAAGATGAA+AGG | 0.515245 | 3.1:-74490591 | MS.gene013510:intron |
| GCAAATCGGAGAATAGAATT+GGG | 0.516838 | 3.1:+74490950 | None:intergenic |
| AAAGAGAAGAGATGATTAGG+AGG | 0.524216 | 3.1:-74491542 | MS.gene013510:CDS |
| AATCATGGCTACTTAGCTGC+TGG | 0.525224 | 3.1:-74491809 | MS.gene013510:CDS |
| GCACGGACTGGTGTCTTTGA+CGG | 0.529105 | 3.1:+74488520 | None:intergenic |
| CATTGTTCACCATAAACTGC+TGG | 0.530549 | 3.1:+74491969 | None:intergenic |
| GGGTAACCAAACCCAGCAGC+AGG | 0.537106 | 3.1:+74491785 | None:intergenic |
| AGGCACAAATTCCTCAGCCA+TGG | 0.537373 | 3.1:+74491847 | None:intergenic |
| AGCTTCAAGACTCATCAAAT+GGG | 0.539915 | 3.1:-74492010 | MS.gene013510:CDS |
| CTGCACAAACATTGACAAGA+AGG | 0.541546 | 3.1:-74490545 | MS.gene013510:intron |
| CCATCGACTGAGGCTTCTTG+GGG | 0.542498 | 3.1:-74490164 | MS.gene013510:CDS |
| ATGCAATCCGAGTTGAATGC+TGG | 0.545014 | 3.1:+74490137 | None:intergenic |
| CCCCAAGAAGCCTCAGTCGA+TGG | 0.545706 | 3.1:+74490164 | None:intergenic |
| GGAGAAGAACGAGCACGGAC+TGG | 0.546895 | 3.1:+74488508 | None:intergenic |
| GCGAAGAGCGAATCATAAAG+TGG | 0.552369 | 3.1:-74491574 | MS.gene013510:CDS |
| CCGTCGCTAACAAATAATCA+TGG | 0.562558 | 3.1:-74491824 | MS.gene013510:CDS |
| TCTCTTTCTTAATTGCGGCC+AGG | 0.567558 | 3.1:-74491356 | MS.gene013510:intron |
| CTTTGAATCTATCTGTGGAG+AGG | 0.569385 | 3.1:-74490370 | MS.gene013510:intron |
| AATGATGGATATGTGATGAA+TGG | 0.569689 | 3.1:-74491950 | MS.gene013510:CDS |
| GTTGTTGTTCACATCCTGAT+CGG | 0.571533 | 3.1:+74492069 | None:intergenic |
| TGATTATTTGTTAGCGACGG+AGG | 0.572810 | 3.1:+74491827 | None:intergenic |
| CACTTCTTTGAATCTATCTG+TGG | 0.573834 | 3.1:-74490375 | MS.gene013510:CDS |
| ACCCCAGCATAGTTCCAGAC+AGG | 0.575054 | 3.1:+74490791 | None:intergenic |
| GGCACAAATTCCTCAGCCAT+GGG | 0.576547 | 3.1:+74491848 | None:intergenic |
| ATGGCTGTTGCTGAAAATGT+TGG | 0.578892 | 3.1:-74492187 | MS.gene013510:CDS |
| CCATGATTATTTGTTAGCGA+CGG | 0.584715 | 3.1:+74491824 | None:intergenic |
| GTTGTTGATTGTCGGGTATG+CGG | 0.593806 | 3.1:-74490977 | MS.gene013510:CDS |
| AAAGCTGAATCCCATGGCTG+AGG | 0.595003 | 3.1:-74491858 | MS.gene013510:CDS |
| TTGTACATGCAGAGAGTGCA+AGG | 0.595706 | 3.1:-74490825 | MS.gene013510:intron |
| GGGATTACCAGCATTCAACT+CGG | 0.596095 | 3.1:-74490144 | MS.gene013510:CDS |
| ATCATCTGACTCAACTGAGG+TGG | 0.609851 | 3.1:-74492110 | MS.gene013510:CDS |
| TGCATTTGTTGAGTTTGCAG+TGG | 0.610173 | 3.1:-74490119 | MS.gene013510:intron |
| ATTGCAGCTCTAAGCTGCAG+TGG | 0.625007 | 3.1:-74488669 | MS.gene013510:CDS |
| TACGAGGAGAAGAACGAGCA+CGG | 0.626781 | 3.1:+74488503 | None:intergenic |
| CTAACGGCCAAACTAACCGT+AGG | 0.628743 | 3.1:-74491727 | MS.gene013510:CDS |
| TGTTGGATTGACAGGTGCAA+TGG | 0.631796 | 3.1:+74490735 | None:intergenic |
| GCCTGTCTGGAACTATGCTG+GGG | 0.640656 | 3.1:-74490792 | MS.gene013510:CDS |
| ATGAGAAATGGTGAGAATGG+AGG | 0.651521 | 3.1:-74491926 | MS.gene013510:CDS |
| TAACGGCCAAACTAACCGTA+GGG | 0.656336 | 3.1:-74491726 | MS.gene013510:intron |
| TTATCTAGGTCCATCGACTG+AGG | 0.678332 | 3.1:-74490174 | MS.gene013510:intron |
| GTTGTCAAAGCTGAATCCCA+TGG | 0.699172 | 3.1:-74491864 | MS.gene013510:CDS |
| CGTATCATCTGACTCAACTG+AGG | 0.701261 | 3.1:-74492113 | MS.gene013510:CDS |
| AGGTGGAGAAATCGAAACCG+AGG | 0.703142 | 3.1:-74492093 | MS.gene013510:CDS |
| GATTCAGTTCATGGACTACG+AGG | 0.724532 | 3.1:+74488487 | None:intergenic |
| GATCAGGATGTGAACAACAA+CGG | 0.735570 | 3.1:-74492067 | MS.gene013510:CDS |
| TGTACATGCAGAGAGTGCAA+GGG | 0.746861 | 3.1:-74490824 | MS.gene013510:intron |
| TTGAGTCAGATGATACGACG+TGG | 0.773827 | 3.1:+74492119 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAATATTTTTCATTGTTT+TGG | - | chr3.1:74490481-74490500 | MS.gene013510:intron | 10.0% |
| !! | ACTAATTTAATCATATACAA+AGG | - | chr3.1:74489498-74489517 | MS.gene013510:intron | 15.0% |
| !! | ATTTAGTAAACTTACTTTAA+TGG | - | chr3.1:74491448-74491467 | MS.gene013510:intron | 15.0% |
| !! | TGTTTATATAATCTATTCTA+AGG | + | chr3.1:74491115-74491134 | None:intergenic | 15.0% |
| !!! | ATATTTTAGCATTTTACTAA+GGG | + | chr3.1:74491855-74491874 | None:intergenic | 15.0% |
| !!! | TAAGAAGTATAAAATTGTTA+GGG | + | chr3.1:74488920-74488939 | None:intergenic | 15.0% |
| !!! | TATATTTTAGCATTTTACTA+AGG | + | chr3.1:74491856-74491875 | None:intergenic | 15.0% |
| !!! | TTAAGAAGTATAAAATTGTT+AGG | + | chr3.1:74488921-74488940 | None:intergenic | 15.0% |
| !! | AAAAACACATCATTGTATTA+AGG | + | chr3.1:74489056-74489075 | None:intergenic | 20.0% |
| !! | AAAATAGGATGTATAGTTAT+AGG | + | chr3.1:74490754-74490773 | None:intergenic | 20.0% |
| !! | AAATAGGATGTATAGTTATA+GGG | + | chr3.1:74490753-74490772 | None:intergenic | 20.0% |
| !! | AATAATTATGCTAATGCTAA+CGG | - | chr3.1:74488939-74488958 | MS.gene013510:intron | 20.0% |
| !! | GTTTATTTATGAATTTGGAA+TGG | - | chr3.1:74490942-74490961 | MS.gene013510:CDS | 20.0% |
| !! | TAGTGAAGTTATTAATTCTA+AGG | - | chr3.1:74491298-74491317 | MS.gene013510:intron | 20.0% |
| !! | TCCAAATTCATAAATAAACA+AGG | + | chr3.1:74490941-74490960 | None:intergenic | 20.0% |
| !! | TGCTAAAATATATGAAGTAT+TGG | - | chr3.1:74491864-74491883 | MS.gene013510:CDS | 20.0% |
| !! | TTATTGACAGAAGTAAAAAT+AGG | + | chr3.1:74490769-74490788 | None:intergenic | 20.0% |
| !!! | ACTAAATGTTTTGTTTGTTT+AGG | + | chr3.1:74491435-74491454 | None:intergenic | 20.0% |
| !!! | ATTGTCATTTGTACTATTTA+GGG | - | chr3.1:74489620-74489639 | MS.gene013510:intron | 20.0% |
| !!! | TAATGATTGTTGTTTTATGT+CGG | - | chr3.1:74489273-74489292 | MS.gene013510:intron | 20.0% |
| !!! | TATTTTAGCATTTTACTAAG+GGG | + | chr3.1:74491854-74491873 | None:intergenic | 20.0% |
| !!! | TCCTTGTTTATTTATGAATT+TGG | - | chr3.1:74490937-74490956 | MS.gene013510:CDS | 20.0% |
| !!! | TGGTTTTGTTCTTAATTAAT+TGG | - | chr3.1:74491810-74491829 | MS.gene013510:CDS | 20.0% |
| ! | AACTTCACTAATTCAAACTA+AGG | + | chr3.1:74491288-74491307 | None:intergenic | 25.0% |
| ! | AGGTAAATTATTATTCACTC+TGG | + | chr3.1:74490034-74490053 | None:intergenic | 25.0% |
| ! | ATAACTTCACAAAGCAATAT+AGG | + | chr3.1:74490664-74490683 | None:intergenic | 25.0% |
| ! | CACTTTCATTTAATCTTACT+TGG | - | chr3.1:74490176-74490195 | MS.gene013510:intron | 25.0% |
| ! | CATTATATTGATATAGTCCA+TGG | - | chr3.1:74490410-74490429 | MS.gene013510:intron | 25.0% |
| ! | GTTAAAAAATATACCTTCGA+TGG | + | chr3.1:74489480-74489499 | None:intergenic | 25.0% |
| ! | TACAATTGAAGAGTTGAATA+AGG | + | chr3.1:74491174-74491193 | None:intergenic | 25.0% |
| ! | TAGTACAAATGACAATGTAA+CGG | + | chr3.1:74489616-74489635 | None:intergenic | 25.0% |
| ! | TTGAGCAAATAAAAGTAAGA+AGG | + | chr3.1:74490611-74490630 | None:intergenic | 25.0% |
| ! | TTTCATTTAATCTTACTTGG+AGG | - | chr3.1:74490179-74490198 | MS.gene013510:intron | 25.0% |
| !! | AAGAGAGAATTTGAAATTGA+CGG | + | chr3.1:74491633-74491652 | None:intergenic | 25.0% |
| !! | ATTTATTATGTTAGCTCTTG+TGG | - | chr3.1:74490861-74490880 | MS.gene013510:intron | 25.0% |
| !! | ATTTGCTGAAATTAGCTTAT+GGG | + | chr3.1:74491081-74491100 | None:intergenic | 25.0% |
| !! | CATGGACTATATCAATATAA+TGG | + | chr3.1:74490412-74490431 | None:intergenic | 25.0% |
| !! | CATTGTCATTTGTACTATTT+AGG | - | chr3.1:74489619-74489638 | MS.gene013510:intron | 25.0% |
| !! | TTTATTATGTTAGCTCTTGT+GGG | - | chr3.1:74490862-74490881 | MS.gene013510:intron | 25.0% |
| !!! | AATTTGCTGAAATTAGCTTA+TGG | + | chr3.1:74491082-74491101 | None:intergenic | 25.0% |
| !!! | ATTGTTTTGGTGTATTATCT+AGG | - | chr3.1:74490494-74490513 | MS.gene013510:intron | 25.0% |
| !!! | ATTTTAGCATTTTACTAAGG+GGG | + | chr3.1:74491853-74491872 | None:intergenic | 25.0% |
| !!! | CAAATCATTTTAGTATTGCT+TGG | + | chr3.1:74489578-74489597 | None:intergenic | 25.0% |
| !!! | TACAATGATGTGTTTTTTAG+AGG | - | chr3.1:74489059-74489078 | MS.gene013510:intron | 25.0% |
| !!! | TAGTAGTTTTTAATGGATCT+TGG | - | chr3.1:74490336-74490355 | MS.gene013510:intron | 25.0% |
| !!! | TTTTCTCTTGATTGTTTTTC+AGG | + | chr3.1:74490836-74490855 | None:intergenic | 25.0% |
| AACAAAATATCCATACCCTA+CGG | + | chr3.1:74488974-74488993 | None:intergenic | 30.0% | |
| ACAAACGAAAGAAAGAAAAG+AGG | + | chr3.1:74490054-74490073 | None:intergenic | 30.0% | |
| ACAAATGATAACTACAAACC+CGG | + | chr3.1:74490708-74490727 | None:intergenic | 30.0% | |
| ACACGTCATTTACTATTGTT+TGG | + | chr3.1:74489525-74489544 | None:intergenic | 30.0% | |
| ACATCATAGACAAAACGTAT+CGG | + | chr3.1:74489358-74489377 | None:intergenic | 30.0% | |
| AGAAAAGAGAAGAGATGATT+AGG | - | chr3.1:74489137-74489156 | MS.gene013510:intron | 30.0% | |
| CTCTTTCATTAATTTCCTGT+TGG | - | chr3.1:74488999-74489018 | MS.gene013510:intron | 30.0% | |
| GCAAATAAAAGTAAGAAGGT+TGG | + | chr3.1:74490607-74490626 | None:intergenic | 30.0% | |
| GCAGTGAAAATATGTTGTAA+TGG | - | chr3.1:74490985-74491004 | MS.gene013510:intron | 30.0% | |
| GCATATGACCAACAAATATT+TGG | + | chr3.1:74489793-74489812 | None:intergenic | 30.0% | |
| GGTAAACCATCATTAAGAAA+GGG | + | chr3.1:74489650-74489669 | None:intergenic | 30.0% | |
| GTGAAAATATGTTGTAATGG+TGG | - | chr3.1:74490988-74491007 | MS.gene013510:intron | 30.0% | |
| TAAACTCAATGAAGGCAAAT+CGG | + | chr3.1:74489749-74489768 | None:intergenic | 30.0% | |
| TAATAGTTCTCTTCAGAAAG+AGG | + | chr3.1:74489390-74489409 | None:intergenic | 30.0% | |
| TGATTGCTACAAATCAGATA+CGG | + | chr3.1:74490222-74490241 | None:intergenic | 30.0% | |
| TGGTAAACCATCATTAAGAA+AGG | + | chr3.1:74489651-74489670 | None:intergenic | 30.0% | |
| TTCATCTGTAAACTCAATGA+AGG | + | chr3.1:74489757-74489776 | None:intergenic | 30.0% | |
| TTCATTGAGTTTACAGATGA+AGG | - | chr3.1:74489756-74489775 | MS.gene013510:intron | 30.0% | |
| ! | ATTGACAAGAAGGTAGTTTT+GGG | - | chr3.1:74490147-74490166 | MS.gene013510:CDS | 30.0% |
| ! | GAGAGGTTAGTAGTTTTTAA+TGG | - | chr3.1:74490329-74490348 | MS.gene013510:intron | 30.0% |
| ! | TATCTGATTTGTAGCAATCA+AGG | - | chr3.1:74490222-74490241 | MS.gene013510:intron | 30.0% |
| ! | TGAAGCTGTAATTACCATTT+TGG | + | chr3.1:74488659-74488678 | None:intergenic | 30.0% |
| ! | TTGCCATGTCTTTTCTTTTT+TGG | - | chr3.1:74491944-74491963 | MS.gene013510:CDS | 30.0% |
| !! | AATGATGGATATGTGATGAA+TGG | - | chr3.1:74488732-74488751 | MS.gene013510:intron | 30.0% |
| !! | GGATGGAAATTAAAAGCATT+GGG | + | chr3.1:74491556-74491575 | None:intergenic | 30.0% |
| !! | TACTTTTATTTGCTCAACTC+TGG | - | chr3.1:74490614-74490633 | MS.gene013510:intron | 30.0% |
| !! | TGTTGCTTGCATATTCTTTT+GGG | - | chr3.1:74491518-74491537 | MS.gene013510:CDS | 30.0% |
| !!! | AATTACCATTTTGGTGTTGA+TGG | + | chr3.1:74488650-74488669 | None:intergenic | 30.0% |
| !!! | ATGTTTTGTTTGTTTAGGAG+AGG | + | chr3.1:74491430-74491449 | None:intergenic | 30.0% |
| !!! | TAAAGGATTTTTTTACCAGG+AGG | + | chr3.1:74491721-74491740 | None:intergenic | 30.0% |
| !!! | TGCTAAAGGATTTTTTTACC+AGG | + | chr3.1:74491724-74491743 | None:intergenic | 30.0% |
| !!! | TGTGTTTTTTAGAGGAAGAA+TGG | - | chr3.1:74489067-74489086 | MS.gene013510:intron | 30.0% |
| !!! | TGTTTTTCAGGACTTTTAGT+AGG | + | chr3.1:74490824-74490843 | None:intergenic | 30.0% |
| !!! | TTTTTAGTTATCCTTGCAGT+TGG | - | chr3.1:74491790-74491809 | MS.gene013510:CDS | 30.0% |
| AAAGAGAAGAGATGATTAGG+AGG | - | chr3.1:74489140-74489159 | MS.gene013510:intron | 35.0% | |
| AAGAATGGCTACACTACTAA+TGG | - | chr3.1:74489082-74489101 | MS.gene013510:intron | 35.0% | |
| AGCGAATCATAAAGTGGATA+TGG | - | chr3.1:74489114-74489133 | MS.gene013510:intron | 35.0% | |
| AGCTTCAAGACTCATCAAAT+GGG | - | chr3.1:74488672-74488691 | MS.gene013510:CDS | 35.0% | |
| AGGATGTATAGTTATAGGGA+GGG | + | chr3.1:74490749-74490768 | None:intergenic | 35.0% | |
| AGTAAAAGTAAAGCAGCTAC+AGG | + | chr3.1:74491595-74491614 | None:intergenic | 35.0% | |
| AGTTATTAGTCAGCTATGCT+TGG | - | chr3.1:74491258-74491277 | MS.gene013510:intron | 35.0% | |
| ATCTTAACCACTCTTATGTC+TGG | - | chr3.1:74492125-74492144 | MS.gene013510:CDS | 35.0% | |
| ATTTGATCTGATACCATCGA+AGG | - | chr3.1:74489464-74489483 | MS.gene013510:intron | 35.0% | |
| CAACTGTCCTAAAAACTTCA+GGG | - | chr3.1:74492087-74492106 | MS.gene013510:CDS | 35.0% | |
| CACCAACACCAAATATTTGT+TGG | - | chr3.1:74489782-74489801 | MS.gene013510:intron | 35.0% | |
| CACTTCTTTGAATCTATCTG+TGG | - | chr3.1:74490307-74490326 | MS.gene013510:intron | 35.0% | |
| CAGCCAAAAAAGAAAAGACA+TGG | + | chr3.1:74491950-74491969 | None:intergenic | 35.0% | |
| CAGTTTATGGTGAACAATGA+TGG | - | chr3.1:74488717-74488736 | MS.gene013510:intron | 35.0% | |
| CATAGCATCAAAAAACCAAC+AGG | + | chr3.1:74489017-74489036 | None:intergenic | 35.0% | |
| CATGAAAAGCTAAGATGGAA+AGG | + | chr3.1:74490898-74490917 | None:intergenic | 35.0% | |
| GCAAATCGGAGAATAGAATT+GGG | + | chr3.1:74489735-74489754 | None:intergenic | 35.0% | |
| GCATCTCTCTTTCTTAATTG+CGG | - | chr3.1:74489321-74489340 | MS.gene013510:intron | 35.0% | |
| GTGATGAATGGTATGAGAAA+TGG | - | chr3.1:74488744-74488763 | MS.gene013510:intron | 35.0% | |
| GTTTCAGTCTGAAGATGAAA+GGG | - | chr3.1:74490092-74490111 | MS.gene013510:intron | 35.0% | |
| TAAGAACAAAACCAACTGCA+AGG | + | chr3.1:74491804-74491823 | None:intergenic | 35.0% | |
| TAGGATGTATAGTTATAGGG+AGG | + | chr3.1:74490750-74490769 | None:intergenic | 35.0% | |
| TCAACTGTCCTAAAAACTTC+AGG | - | chr3.1:74492086-74492105 | MS.gene013510:CDS | 35.0% | |
| TGGCTTACAATGCTTATTGT+TGG | - | chr3.1:74490356-74490375 | MS.gene013510:intron | 35.0% | |
| TGTTTCAGTCTGAAGATGAA+AGG | - | chr3.1:74490091-74490110 | MS.gene013510:intron | 35.0% | |
| TTCAACCATCAACACCAAAA+TGG | - | chr3.1:74488642-74488661 | MS.gene013510:CDS | 35.0% | |
| TTTCTTTGCCTCATTCTTTC+AGG | - | chr3.1:74491979-74491998 | MS.gene013510:CDS | 35.0% | |
| TTTGCCATGAAAAGCTAAGA+TGG | + | chr3.1:74490903-74490922 | None:intergenic | 35.0% | |
| ! | AAGAGTTCCCTGAAGTTTTT+AGG | + | chr3.1:74492097-74492116 | None:intergenic | 35.0% |
| ! | CATTGACAAGAAGGTAGTTT+TGG | - | chr3.1:74490146-74490165 | MS.gene013510:CDS | 35.0% |
| ! | CCATGATTATTTGTTAGCGA+CGG | + | chr3.1:74488861-74488880 | None:intergenic | 35.0% |
| ! | GGGATGGAAATTAAAAGCAT+TGG | + | chr3.1:74491557-74491576 | None:intergenic | 35.0% |
| ! | GGTTTTCCCTTTCTTAATGA+TGG | - | chr3.1:74489641-74489660 | MS.gene013510:intron | 35.0% |
| ! | GTTGCTTGCATATTCTTTTG+GGG | - | chr3.1:74491519-74491538 | MS.gene013510:CDS | 35.0% |
| !! | AAACTCAAGCATTGAAACCA+TGG | + | chr3.1:74490430-74490449 | None:intergenic | 35.0% |
| !! | ATCTAAGAAAAGCATTACCC+TGG | + | chr3.1:74489980-74489999 | None:intergenic | 35.0% |
| !! | CTTTCCATCTTAGCTTTTCA+TGG | - | chr3.1:74490896-74490915 | MS.gene013510:intron | 35.0% |
| !! | GAAAATGTTGGTGCCAAAAT+CGG | - | chr3.1:74488507-74488526 | MS.gene013510:CDS | 35.0% |
| !! | GACCAACAAATATTTGGTGT+TGG | + | chr3.1:74489787-74489806 | None:intergenic | 35.0% |
| !! | GTTGTTTTATGTCGGAATCT+AGG | - | chr3.1:74489281-74489300 | MS.gene013510:intron | 35.0% |
| !! | TCTAAGAAAAGCATTACCCT+GGG | + | chr3.1:74489979-74489998 | None:intergenic | 35.0% |
| !! | TTTTGTTTGTTTAGGAGAGG+AGG | + | chr3.1:74491427-74491446 | None:intergenic | 35.0% |
| !!! | AGAGTTTTAAGCGTGAAATG+AGG | - | chr3.1:74488781-74488800 | MS.gene013510:intron | 35.0% |
| !!! | CATGTCTTTTCTTTTTTGGC+TGG | - | chr3.1:74491948-74491967 | MS.gene013510:CDS | 35.0% |
| !!! | GAGTTTTAAGCGTGAAATGA+GGG | - | chr3.1:74488782-74488801 | MS.gene013510:intron | 35.0% |
| !!! | GTGTTGCTTGCATATTCTTT+TGG | - | chr3.1:74491517-74491536 | MS.gene013510:CDS | 35.0% |
| ATGAGAAATGGTGAGAATGG+AGG | - | chr3.1:74488756-74488775 | MS.gene013510:intron | 40.0% | |
| ATGGCTGTTGCTGAAAATGT+TGG | - | chr3.1:74488495-74488514 | MS.gene013510:CDS | 40.0% | |
| ATGTATAGTTATAGGGAGGG+AGG | + | chr3.1:74490746-74490765 | None:intergenic | 40.0% | |
| ATTACCCTGGGCAAAAATGT+TGG | + | chr3.1:74489967-74489986 | None:intergenic | 40.0% | |
| CAGCTTCAAGACTCATCAAA+TGG | - | chr3.1:74488671-74488690 | MS.gene013510:CDS | 40.0% | |
| CATTGTTCACCATAAACTGC+TGG | + | chr3.1:74488716-74488735 | None:intergenic | 40.0% | |
| CCGGCAGTAAAATAATCTCA+GGG | + | chr3.1:74490689-74490708 | None:intergenic | 40.0% | |
| CCGTCGCTAACAAATAATCA+TGG | - | chr3.1:74488858-74488877 | MS.gene013510:intron | 40.0% | |
| CGGTTCATCAAGTCAGAATT+TGG | - | chr3.1:74488527-74488546 | MS.gene013510:CDS | 40.0% | |
| CTGCACAAACATTGACAAGA+AGG | - | chr3.1:74490137-74490156 | MS.gene013510:CDS | 40.0% | |
| CTTTCGTTTGTGATGACTGA+TGG | - | chr3.1:74490063-74490082 | MS.gene013510:intron | 40.0% | |
| CTTTGAATCTATCTGTGGAG+AGG | - | chr3.1:74490312-74490331 | MS.gene013510:intron | 40.0% | |
| GATCAGGATGTGAACAACAA+CGG | - | chr3.1:74488615-74488634 | MS.gene013510:intron | 40.0% | |
| GGCAAAAATGTTGGATTGAC+AGG | + | chr3.1:74489958-74489977 | None:intergenic | 40.0% | |
| GGCAAATCGGAGAATAGAAT+TGG | + | chr3.1:74489736-74489755 | None:intergenic | 40.0% | |
| GGTATGAGAAATGGTGAGAA+TGG | - | chr3.1:74488753-74488772 | MS.gene013510:intron | 40.0% | |
| TAAGCGTGAAATGAGGGATT+TGG | - | chr3.1:74488788-74488807 | MS.gene013510:intron | 40.0% | |
| TCTGATATTGATCAGCTGGT+AGG | - | chr3.1:74489175-74489194 | MS.gene013510:intron | 40.0% | |
| TCTTACTTGGAGGAAATGCT+TGG | - | chr3.1:74490189-74490208 | MS.gene013510:intron | 40.0% | |
| TGAAATCCAGCGAACCTTAT+AGG | + | chr3.1:74492058-74492077 | None:intergenic | 40.0% | |
| TGTATAGTTATAGGGAGGGA+GGG | + | chr3.1:74490745-74490764 | None:intergenic | 40.0% | |
| TGTGTCTGATATTGATCAGC+TGG | - | chr3.1:74489171-74489190 | MS.gene013510:intron | 40.0% | |
| TGTTCAGAACCAGCAGTTTA+TGG | - | chr3.1:74488704-74488723 | MS.gene013510:intron | 40.0% | |
| ! | CAATCCAACATTTTTGCCCA+GGG | - | chr3.1:74489960-74489979 | MS.gene013510:intron | 40.0% |
| ! | GTTGTTGTTCACATCCTGAT+CGG | + | chr3.1:74488616-74488635 | None:intergenic | 40.0% |
| ! | TCAATCCAACATTTTTGCCC+AGG | - | chr3.1:74489959-74489978 | MS.gene013510:intron | 40.0% |
| ! | TGATTATTTGTTAGCGACGG+AGG | + | chr3.1:74488858-74488877 | None:intergenic | 40.0% |
| ! | TGCATTTGTTGAGTTTGCAG+TGG | - | chr3.1:74490563-74490582 | MS.gene013510:CDS | 40.0% |
| !! | AAAACGTATCGGTTACTACC+TGG | + | chr3.1:74489347-74489366 | None:intergenic | 40.0% |
| !! | ACAGCTTGGTTTGTGAGTTA+GGG | + | chr3.1:74491749-74491768 | None:intergenic | 40.0% |
| !! | CCCTGAGATTATTTTACTGC+CGG | - | chr3.1:74490686-74490705 | MS.gene013510:intron | 40.0% |
| !! | CCTGAGATTATTTTACTGCC+GGG | - | chr3.1:74490687-74490706 | MS.gene013510:intron | 40.0% |
| !! | CTGACTTGATGAACCGATTT+TGG | + | chr3.1:74488523-74488542 | None:intergenic | 40.0% |
| !!! | AGTTTTTAGAGTTCGAGTCC+TGG | - | chr3.1:74491686-74491705 | MS.gene013510:intron | 40.0% |
| AACTCGTATTTCCTGGCTGT+AGG | - | chr3.1:74489683-74489702 | MS.gene013510:intron | 45.0% | |
| AATCATGGCTACTTAGCTGC+TGG | - | chr3.1:74488873-74488892 | MS.gene013510:intron | 45.0% | |
| ACAATCAACAACCTACAGCC+AGG | + | chr3.1:74489697-74489716 | None:intergenic | 45.0% | |
| ACAGGAGATGCGGAAAAAGT+GGG | + | chr3.1:74491577-74491596 | None:intergenic | 45.0% | |
| ACTCTCAGCCTGAAAGAATG+AGG | + | chr3.1:74491990-74492009 | None:intergenic | 45.0% | |
| ACTCTTATGTCTGGTGTGCA+GGG | - | chr3.1:74492134-74492153 | MS.gene013510:CDS | 45.0% | |
| ATCATCTGACTCAACTGAGG+TGG | - | chr3.1:74488572-74488591 | MS.gene013510:intron | 45.0% | |
| CCCGGCAGTAAAATAATCTC+AGG | + | chr3.1:74490690-74490709 | None:intergenic | 45.0% | |
| CGTATCATCTGACTCAACTG+AGG | - | chr3.1:74488569-74488588 | MS.gene013510:intron | 45.0% | |
| GCGAAGAGCGAATCATAAAG+TGG | - | chr3.1:74489108-74489127 | MS.gene013510:intron | 45.0% | |
| GGGATTACCAGCATTCAACT+CGG | - | chr3.1:74490538-74490557 | MS.gene013510:intron | 45.0% | |
| GTTGTCAAAGCTGAATCCCA+TGG | - | chr3.1:74488818-74488837 | MS.gene013510:intron | 45.0% | |
| TAAAGCAGCTACAGGAGATG+CGG | + | chr3.1:74491587-74491606 | None:intergenic | 45.0% | |
| TAACGGCCAAACTAACCGTA+GGG | - | chr3.1:74488956-74488975 | MS.gene013510:intron | 45.0% | |
| TACAGGAGATGCGGAAAAAG+TGG | + | chr3.1:74491578-74491597 | None:intergenic | 45.0% | |
| TCTCTTTCTTAATTGCGGCC+AGG | - | chr3.1:74489326-74489345 | MS.gene013510:intron | 45.0% | |
| TGTGAGTTAGGGGATGCTAA+AGG | + | chr3.1:74491738-74491757 | None:intergenic | 45.0% | |
| TGTTGGATTGACAGGTGCAA+TGG | + | chr3.1:74489950-74489969 | None:intergenic | 45.0% | |
| TTACTAAGGGGGAGAAGATC+AGG | + | chr3.1:74491842-74491861 | None:intergenic | 45.0% | |
| TTGAGTCAGATGATACGACG+TGG | + | chr3.1:74488566-74488585 | None:intergenic | 45.0% | |
| ! | AAGCTGCAGTGGTGTGATTT+TGG | - | chr3.1:74492024-74492043 | MS.gene013510:CDS | 45.0% |
| ! | AGCTGCAGTGGTGTGATTTT+GGG | - | chr3.1:74492025-74492044 | MS.gene013510:CDS | 45.0% |
| ! | AGGACTTTTAGTAGGCAGTG+TGG | + | chr3.1:74490816-74490835 | None:intergenic | 45.0% |
| ! | ATGCAATCCGAGTTGAATGC+TGG | + | chr3.1:74490548-74490567 | None:intergenic | 45.0% |
| ! | CCAGGAAATACGAGTTGACA+CGG | + | chr3.1:74489679-74489698 | None:intergenic | 45.0% |
| ! | GCTGTAGGTTGTTGATTGTC+GGG | - | chr3.1:74489698-74489717 | MS.gene013510:intron | 45.0% |
| ! | GGCTGTAGGTTGTTGATTGT+CGG | - | chr3.1:74489697-74489716 | MS.gene013510:intron | 45.0% |
| ! | GTTGTTGATTGTCGGGTATG+CGG | - | chr3.1:74489705-74489724 | MS.gene013510:intron | 45.0% |
| ! | TACGAGTTGACACGGTAACA+TGG | + | chr3.1:74489671-74489690 | None:intergenic | 45.0% |
| ! | TCCATACCCTACGGTTAGTT+TGG | + | chr3.1:74488965-74488984 | None:intergenic | 45.0% |
| ! | TGTACATGCAGAGAGTGCAA+GGG | - | chr3.1:74489858-74489877 | MS.gene013510:intron | 45.0% |
| ! | TTATCTAGGTCCATCGACTG+AGG | - | chr3.1:74490508-74490527 | MS.gene013510:intron | 45.0% |
| ! | TTGTACATGCAGAGAGTGCA+AGG | - | chr3.1:74489857-74489876 | MS.gene013510:intron | 45.0% |
| !! | CAGCTTGGTTTGTGAGTTAG+GGG | + | chr3.1:74491748-74491767 | None:intergenic | 45.0% |
| !! | GACAGCTTGGTTTGTGAGTT+AGG | + | chr3.1:74491750-74491769 | None:intergenic | 45.0% |
| !!! | GGATTTTTTTACCAGGAGGC+AGG | + | chr3.1:74491717-74491736 | None:intergenic | 45.0% |
| !!! | TTTTTTACCAGGAGGCAGGA+GGG | + | chr3.1:74491713-74491732 | None:intergenic | 45.0% |
| !!! | TTTTTTTACCAGGAGGCAGG+AGG | + | chr3.1:74491714-74491733 | None:intergenic | 45.0% |
| AAAGCTGAATCCCATGGCTG+AGG | - | chr3.1:74488824-74488843 | MS.gene013510:intron | 50.0% | |
| AGGCACAAATTCCTCAGCCA+TGG | + | chr3.1:74488838-74488857 | None:intergenic | 50.0% | |
| AGGTGGAGAAATCGAAACCG+AGG | - | chr3.1:74488589-74488608 | MS.gene013510:intron | 50.0% | |
| CACAAGTTCACTGCCAACCA+AGG | + | chr3.1:74491500-74491519 | None:intergenic | 50.0% | |
| CACTCTTATGTCTGGTGTGC+AGG | - | chr3.1:74492133-74492152 | MS.gene013510:CDS | 50.0% | |
| CCGTGTCAACTCGTATTTCC+TGG | - | chr3.1:74489676-74489695 | MS.gene013510:intron | 50.0% | |
| CTAACGGCCAAACTAACCGT+AGG | - | chr3.1:74488955-74488974 | MS.gene013510:intron | 50.0% | |
| CTGCACACCAGACATAAGAG+TGG | + | chr3.1:74492135-74492154 | None:intergenic | 50.0% | |
| GAGATGCGGAAAAAGTGGGA+TGG | + | chr3.1:74491573-74491592 | None:intergenic | 50.0% | |
| GCCAAACTAACCGTAGGGTA+TGG | - | chr3.1:74488961-74488980 | MS.gene013510:intron | 50.0% | |
| GGCACAAATTCCTCAGCCAT+GGG | + | chr3.1:74488837-74488856 | None:intergenic | 50.0% | |
| TACGAGGAGAAGAACGAGCA+CGG | + | chr3.1:74492182-74492201 | None:intergenic | 50.0% | |
| TCACTGCCAACCAAGGTAAG+CGG | + | chr3.1:74491493-74491512 | None:intergenic | 50.0% | |
| TGAGTCTCAAGCAGACAGCT+TGG | + | chr3.1:74491763-74491782 | None:intergenic | 50.0% | |
| TGGAAGGCAGCACTCTCAAT+GGG | + | chr3.1:74489921-74489940 | None:intergenic | 50.0% | |
| TTCACATCCTGATCGGTCCT+CGG | + | chr3.1:74488609-74488628 | None:intergenic | 50.0% | |
| TTGGAAGGCAGCACTCTCAA+TGG | + | chr3.1:74489922-74489941 | None:intergenic | 50.0% | |
| ! | AAGCCTGTCTGGAACTATGC+TGG | - | chr3.1:74489888-74489907 | MS.gene013510:intron | 50.0% |
| ! | AGCCTGTCTGGAACTATGCT+GGG | - | chr3.1:74489889-74489908 | MS.gene013510:intron | 50.0% |
| ! | GACAGGTGCAATGGCAGTTT+TGG | + | chr3.1:74489941-74489960 | None:intergenic | 50.0% |
| ! | TCCATCGACTGAGGCTTCTT+GGG | - | chr3.1:74490517-74490536 | MS.gene013510:intron | 50.0% |
| !! | ATTGCAGCTCTAAGCTGCAG+TGG | - | chr3.1:74492013-74492032 | MS.gene013510:CDS | 50.0% |
| !! | TTTTGGGTGCGCTGCCTATA+AGG | - | chr3.1:74492041-74492060 | MS.gene013510:CDS | 50.0% |
| !!! | GGTGCAATGGCAGTTTTGGA+AGG | + | chr3.1:74489937-74489956 | None:intergenic | 50.0% |
| ACCCCAGCATAGTTCCAGAC+AGG | + | chr3.1:74489894-74489913 | None:intergenic | 55.0% | |
| ATCGAAACCGAGGACCGATC+AGG | - | chr3.1:74488599-74488618 | MS.gene013510:intron | 55.0% | |
| CAACCAAGGTAAGCGGCAGA+AGG | + | chr3.1:74491486-74491505 | None:intergenic | 55.0% | |
| CTAGGTTACCGAAGAGCAGC+TGG | - | chr3.1:74489299-74489318 | MS.gene013510:intron | 55.0% | |
| GAGAGATGCCAGCTGCTCTT+CGG | + | chr3.1:74489310-74489329 | None:intergenic | 55.0% | |
| ! | CAACCTTCTGCCGCTTACCT+TGG | - | chr3.1:74491480-74491499 | MS.gene013510:intron | 55.0% |
| ! | CCATCGACTGAGGCTTCTTG+GGG | - | chr3.1:74490518-74490537 | MS.gene013510:intron | 55.0% |
| ! | CTTCTGCCGCTTACCTTGGT+TGG | - | chr3.1:74491484-74491503 | MS.gene013510:intron | 55.0% |
| ! | GCCTGTCTGGAACTATGCTG+GGG | - | chr3.1:74489890-74489909 | MS.gene013510:intron | 55.0% |
| ! | GTCCATCGACTGAGGCTTCT+TGG | - | chr3.1:74490516-74490535 | MS.gene013510:intron | 55.0% |
| !! | GCACGGACTGGTGTCTTTGA+CGG | + | chr3.1:74492165-74492184 | None:intergenic | 55.0% |
| AGGGCTGCTGTAAGCCTGTC+TGG | - | chr3.1:74489877-74489896 | MS.gene013510:intron | 60.0% | |
| CCCCAAGAAGCCTCAGTCGA+TGG | + | chr3.1:74490521-74490540 | None:intergenic | 60.0% | |
| GCGCTGCCTATAAGGTTCGC+TGG | - | chr3.1:74492049-74492068 | MS.gene013510:CDS | 60.0% | |
| GGAGAAGAACGAGCACGGAC+TGG | + | chr3.1:74492177-74492196 | None:intergenic | 60.0% | |
| GGGTAACCAAACCCAGCAGC+AGG | + | chr3.1:74488900-74488919 | None:intergenic | 60.0% | |
| TAGCTGCTGGACCTGCTGCT+GGG | - | chr3.1:74488886-74488905 | MS.gene013510:intron | 60.0% | |
| TTAGCTGCTGGACCTGCTGC+TGG | - | chr3.1:74488885-74488904 | MS.gene013510:intron | 60.0% | |
| GCTGGACCTGCTGCTGGGTT+TGG | - | chr3.1:74488891-74488910 | MS.gene013510:intron | 65.0% | |
| ACCAGGAGGCAGGAGGGTCC+AGG | + | chr3.1:74491707-74491726 | None:intergenic | 70.0% | |
| TCCTGGACCCTCCTGCCTCC+TGG | - | chr3.1:74491703-74491722 | MS.gene013510:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 74488495 | 74492209 | 74488495 | ID=MS.gene013510 |
| chr3.1 | mRNA | 74488495 | 74492209 | 74488495 | ID=MS.gene013510.t1;Parent=MS.gene013510 |
| chr3.1 | exon | 74491727 | 74492209 | 74491727 | ID=MS.gene013510.t1.exon1;Parent=MS.gene013510.t1 |
| chr3.1 | CDS | 74491727 | 74492209 | 74491727 | ID=cds.MS.gene013510.t1;Parent=MS.gene013510.t1 |
| chr3.1 | exon | 74491512 | 74491625 | 74491512 | ID=MS.gene013510.t1.exon2;Parent=MS.gene013510.t1 |
| chr3.1 | CDS | 74491512 | 74491625 | 74491512 | ID=cds.MS.gene013510.t1;Parent=MS.gene013510.t1 |
| chr3.1 | exon | 74491357 | 74491401 | 74491357 | ID=MS.gene013510.t1.exon3;Parent=MS.gene013510.t1 |
| chr3.1 | CDS | 74491357 | 74491401 | 74491357 | ID=cds.MS.gene013510.t1;Parent=MS.gene013510.t1 |
| chr3.1 | exon | 74490927 | 74490999 | 74490927 | ID=MS.gene013510.t1.exon4;Parent=MS.gene013510.t1 |
| chr3.1 | CDS | 74490927 | 74490999 | 74490927 | ID=cds.MS.gene013510.t1;Parent=MS.gene013510.t1 |
| chr3.1 | exon | 74490723 | 74490835 | 74490723 | ID=MS.gene013510.t1.exon5;Parent=MS.gene013510.t1 |
| chr3.1 | CDS | 74490723 | 74490835 | 74490723 | ID=cds.MS.gene013510.t1;Parent=MS.gene013510.t1 |
| chr3.1 | exon | 74490546 | 74490605 | 74490546 | ID=MS.gene013510.t1.exon6;Parent=MS.gene013510.t1 |
| chr3.1 | CDS | 74490546 | 74490605 | 74490546 | ID=cds.MS.gene013510.t1;Parent=MS.gene013510.t1 |
| chr3.1 | exon | 74490371 | 74490418 | 74490371 | ID=MS.gene013510.t1.exon7;Parent=MS.gene013510.t1 |
| chr3.1 | CDS | 74490371 | 74490418 | 74490371 | ID=cds.MS.gene013510.t1;Parent=MS.gene013510.t1 |
| chr3.1 | exon | 74490120 | 74490188 | 74490120 | ID=MS.gene013510.t1.exon8;Parent=MS.gene013510.t1 |
| chr3.1 | CDS | 74490120 | 74490188 | 74490120 | ID=cds.MS.gene013510.t1;Parent=MS.gene013510.t1 |
| chr3.1 | exon | 74488642 | 74488703 | 74488642 | ID=MS.gene013510.t1.exon9;Parent=MS.gene013510.t1 |
| chr3.1 | CDS | 74488642 | 74488703 | 74488642 | ID=cds.MS.gene013510.t1;Parent=MS.gene013510.t1 |
| chr3.1 | exon | 74488495 | 74488549 | 74488495 | ID=MS.gene013510.t1.exon10;Parent=MS.gene013510.t1 |
| chr3.1 | CDS | 74488495 | 74488549 | 74488495 | ID=cds.MS.gene013510.t1;Parent=MS.gene013510.t1 |
| Gene Sequence |
| Protein sequence |
