Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06838.t1 | GAU43663.1 | 90.4 | 385 | 24 | 5 | 1 | 373 | 1 | 384 | 9.90E-183 | 649.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06838.t1 | Q9S7N9 | 70.4 | 280 | 78 | 3 | 93 | 371 | 57 | 332 | 4.2e-105 | 382.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06838.t1 | A0A2Z6NNS2 | 90.4 | 385 | 24 | 5 | 1 | 373 | 1 | 384 | 7.1e-183 | 649.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057233 | MS.gene06838 | 0.97381 | 4.61E-137 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene06838 | MS.gene06837 | PPI |
| MS.gene013510 | MS.gene06838 | PPI |
| MS.gene057234 | MS.gene06838 | PPI |
| MS.gene06837 | MS.gene06838 | PPI |
| MS.gene013509 | MS.gene06838 | PPI |
| MS.gene06838 | MS.gene33521 | PPI |
| MS.gene06838 | MS.gene06621 | PPI |
| MS.gene06620 | MS.gene06838 | PPI |
| MS.gene06838 | MS.gene057233 | PPI |
| MS.gene06836 | MS.gene06838 | PPI |
| MS.gene06838 | MS.gene057234 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06838.t1 | MTR_3g092510 | 97.872 | 376 | 5 | 1 | 1 | 373 | 1 | 376 | 0.0 | 764 |
| MS.gene06838.t1 | MTR_3g092550 | 77.078 | 397 | 52 | 11 | 1 | 373 | 1 | 382 | 0.0 | 581 |
| MS.gene06838.t1 | MTR_2g070540 | 63.534 | 266 | 95 | 1 | 102 | 367 | 28 | 291 | 1.54e-118 | 345 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06838.t1 | AT1G32790 | 70.833 | 288 | 78 | 3 | 90 | 373 | 71 | 356 | 6.06e-143 | 410 |
| MS.gene06838.t1 | AT4G10610 | 70.357 | 280 | 78 | 3 | 93 | 371 | 57 | 332 | 6.99e-143 | 409 |
| MS.gene06838.t1 | AT3G49390 | 58.082 | 365 | 132 | 7 | 1 | 365 | 1 | 344 | 1.03e-140 | 404 |
| MS.gene06838.t1 | AT3G49390 | 46.465 | 99 | 47 | 4 | 181 | 278 | 258 | 351 | 4.57e-14 | 73.2 |
| MS.gene06838.t1 | AT3G49390 | 58.082 | 365 | 132 | 7 | 1 | 365 | 1 | 344 | 1.03e-140 | 404 |
| MS.gene06838.t1 | AT3G49390 | 46.465 | 99 | 47 | 4 | 181 | 278 | 258 | 351 | 4.57e-14 | 73.2 |
| MS.gene06838.t1 | AT3G49390 | 58.082 | 365 | 132 | 7 | 1 | 365 | 1 | 344 | 1.03e-140 | 404 |
| MS.gene06838.t1 | AT3G49390 | 46.465 | 99 | 47 | 4 | 181 | 278 | 258 | 351 | 4.57e-14 | 73.2 |
| MS.gene06838.t1 | AT1G32790 | 69.963 | 273 | 77 | 2 | 90 | 358 | 71 | 342 | 9.58e-134 | 388 |
| MS.gene06838.t1 | AT1G32790 | 40.000 | 90 | 50 | 2 | 286 | 372 | 173 | 261 | 6.36e-12 | 67.0 |
| MS.gene06838.t1 | AT4G10610 | 69.811 | 265 | 75 | 3 | 93 | 356 | 57 | 317 | 2.69e-133 | 384 |
| MS.gene06838.t1 | AT1G53650 | 60.806 | 273 | 91 | 3 | 101 | 373 | 49 | 305 | 7.20e-117 | 342 |
| MS.gene06838.t1 | AT3G14450 | 54.194 | 310 | 121 | 4 | 70 | 367 | 19 | 319 | 1.39e-115 | 339 |
| MS.gene06838.t1 | AT1G53650 | 59.498 | 279 | 91 | 4 | 101 | 373 | 49 | 311 | 2.18e-110 | 325 |
| MS.gene06838.t1 | AT5G24440 | 48.387 | 372 | 134 | 6 | 1 | 369 | 1 | 317 | 3.10e-110 | 325 |
Find 91 sgRNAs with CRISPR-Local
Find 245 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGACTTGATGAACCGATTT+TGG | 0.114098 | 3.1:+74444481 | None:intergenic |
| AAGCTGCAGTGGTGTGATTT+TGG | 0.171226 | 3.1:-74440976 | MS.gene06838:CDS |
| CGGTTCATCAAGTCAGAATT+TGG | 0.175529 | 3.1:-74444474 | MS.gene06838:CDS |
| TGAAGCTGTAATTACCATTT+TGG | 0.185564 | 3.1:+74444345 | None:intergenic |
| TGTTCAGAACCAGCAGTTTA+TGG | 0.209925 | 3.1:-74444297 | MS.gene06838:CDS |
| TTAAGAAGTATAAAATTGTT+AGG | 0.257529 | 3.1:+74444083 | None:intergenic |
| TGAAATCCAGCGAACCTTAT+AGG | 0.263840 | 3.1:+74440945 | None:intergenic |
| GACAGGTGCAATGGCAGTTT+TGG | 0.297685 | 3.1:+74443063 | None:intergenic |
| GTCCATCGACTGAGGCTTCT+TGG | 0.311133 | 3.1:-74442485 | MS.gene06838:CDS |
| TTAGCTGCTGGACCTGCTGC+TGG | 0.319582 | 3.1:-74444116 | MS.gene06838:CDS |
| TCCATACCCTACGGTTAGTT+TGG | 0.330085 | 3.1:+74444039 | None:intergenic |
| GGCAAATCGGAGAATAGAAT+TGG | 0.332888 | 3.1:+74443268 | None:intergenic |
| AGCGAATCATAAAGTGGATA+TGG | 0.334771 | 3.1:-74443887 | MS.gene06838:CDS |
| GCTGGACCTGCTGCTGGGTT+TGG | 0.337646 | 3.1:-74444110 | MS.gene06838:CDS |
| TCCATCGACTGAGGCTTCTT+GGG | 0.338255 | 3.1:-74442484 | MS.gene06838:CDS |
| TTCATTGAGTTTACAGATGA+AGG | 0.345676 | 3.1:-74443245 | MS.gene06838:intron |
| TAAGCGTGAAATGAGGGATT+TGG | 0.349931 | 3.1:-74444213 | MS.gene06838:CDS |
| TTCAACCATCAACACCAAAA+TGG | 0.363787 | 3.1:-74444359 | MS.gene06838:CDS |
| AGAAAAGAGAAGAGATGATT+AGG | 0.382555 | 3.1:-74443864 | MS.gene06838:CDS |
| GGCTGTAGGTTGTTGATTGT+CGG | 0.389761 | 3.1:-74443304 | MS.gene06838:intron |
| AGGGCTGCTGTAAGCCTGTC+TGG | 0.404077 | 3.1:-74443124 | MS.gene06838:CDS |
| CAGCTTCAAGACTCATCAAA+TGG | 0.409609 | 3.1:-74444330 | MS.gene06838:CDS |
| AAGCCTGTCTGGAACTATGC+TGG | 0.410248 | 3.1:-74443113 | MS.gene06838:CDS |
| AAGAATGGCTACACTACTAA+TGG | 0.438109 | 3.1:-74443919 | MS.gene06838:CDS |
| ATCGAAACCGAGGACCGATC+AGG | 0.441198 | 3.1:-74444402 | MS.gene06838:CDS |
| TAAGAAGTATAAAATTGTTA+GGG | 0.444999 | 3.1:+74444084 | None:intergenic |
| TTCACATCCTGATCGGTCCT+CGG | 0.451129 | 3.1:+74444395 | None:intergenic |
| GAAAATGTTGGTGCCAAAAT+CGG | 0.469626 | 3.1:-74444494 | MS.gene06838:CDS |
| TAGCTGCTGGACCTGCTGCT+GGG | 0.473262 | 3.1:-74444115 | MS.gene06838:CDS |
| TTGGAAGGCAGCACTCTCAA+TGG | 0.478989 | 3.1:+74443082 | None:intergenic |
| TAAACTCAATGAAGGCAAAT+CGG | 0.481637 | 3.1:+74443255 | None:intergenic |
| CTAGGTTACCGAAGAGCAGC+TGG | 0.486453 | 3.1:-74443702 | MS.gene06838:intron |
| GGTATGAGAAATGGTGAGAA+TGG | 0.491432 | 3.1:-74444248 | MS.gene06838:CDS |
| TTCATCTGTAAACTCAATGA+AGG | 0.492617 | 3.1:+74443247 | None:intergenic |
| TGGAAGGCAGCACTCTCAAT+GGG | 0.493363 | 3.1:+74443083 | None:intergenic |
| CAGTTTATGGTGAACAATGA+TGG | 0.493578 | 3.1:-74444284 | MS.gene06838:CDS |
| GCTGTAGGTTGTTGATTGTC+GGG | 0.497702 | 3.1:-74443303 | MS.gene06838:intron |
| GAGAGATGCCAGCTGCTCTT+CGG | 0.503624 | 3.1:+74443694 | None:intergenic |
| AGCCTGTCTGGAACTATGCT+GGG | 0.503870 | 3.1:-74443112 | MS.gene06838:CDS |
| GTGATGAATGGTATGAGAAA+TGG | 0.508297 | 3.1:-74444257 | MS.gene06838:CDS |
| GCATCTCTCTTTCTTAATTG+CGG | 0.509572 | 3.1:-74443680 | MS.gene06838:CDS |
| TGTGTCTGATATTGATCAGC+TGG | 0.511413 | 3.1:-74443830 | MS.gene06838:intron |
| AATAATTATGCTAATGCTAA+CGG | 0.512676 | 3.1:-74444062 | MS.gene06838:CDS |
| GTTTCAGTCTGAAGATGAAA+GGG | 0.512987 | 3.1:-74442909 | MS.gene06838:intron |
| TGTTTCAGTCTGAAGATGAA+AGG | 0.515245 | 3.1:-74442910 | MS.gene06838:intron |
| GCAAATCGGAGAATAGAATT+GGG | 0.516838 | 3.1:+74443269 | None:intergenic |
| AAAGAGAAGAGATGATTAGG+AGG | 0.524216 | 3.1:-74443861 | MS.gene06838:CDS |
| AATCATGGCTACTTAGCTGC+TGG | 0.525224 | 3.1:-74444128 | MS.gene06838:CDS |
| GCACGGACTGGTGTCTTTGA+CGG | 0.529105 | 3.1:+74440838 | None:intergenic |
| CATTGTTCACCATAAACTGC+TGG | 0.530549 | 3.1:+74444288 | None:intergenic |
| GGGTAACCAAACCCAGCAGC+AGG | 0.537106 | 3.1:+74444104 | None:intergenic |
| AGGCACAAATTCCTCAGCCA+TGG | 0.537373 | 3.1:+74444166 | None:intergenic |
| AGCTTCAAGACTCATCAAAT+GGG | 0.539915 | 3.1:-74444329 | MS.gene06838:CDS |
| CTGCACAAACATTGACAAGA+AGG | 0.541546 | 3.1:-74442864 | MS.gene06838:intron |
| CCATCGACTGAGGCTTCTTG+GGG | 0.542498 | 3.1:-74442483 | MS.gene06838:CDS |
| ATGCAATCCGAGTTGAATGC+TGG | 0.545014 | 3.1:+74442456 | None:intergenic |
| CCCCAAGAAGCCTCAGTCGA+TGG | 0.545706 | 3.1:+74442483 | None:intergenic |
| GGAGAAGAACGAGCACGGAC+TGG | 0.546895 | 3.1:+74440826 | None:intergenic |
| GCGAAGAGCGAATCATAAAG+TGG | 0.552369 | 3.1:-74443893 | MS.gene06838:CDS |
| CCGTCGCTAACAAATAATCA+TGG | 0.562558 | 3.1:-74444143 | MS.gene06838:CDS |
| TCTCTTTCTTAATTGCGGCC+AGG | 0.567558 | 3.1:-74443675 | MS.gene06838:intron |
| CTTTGAATCTATCTGTGGAG+AGG | 0.569385 | 3.1:-74442689 | MS.gene06838:intron |
| AATGATGGATATGTGATGAA+TGG | 0.569689 | 3.1:-74444269 | MS.gene06838:CDS |
| GTTGTTGTTCACATCCTGAT+CGG | 0.571533 | 3.1:+74444388 | None:intergenic |
| TGATTATTTGTTAGCGACGG+AGG | 0.572810 | 3.1:+74444146 | None:intergenic |
| CACTTCTTTGAATCTATCTG+TGG | 0.573834 | 3.1:-74442694 | MS.gene06838:CDS |
| ACCCCAGCATAGTTCCAGAC+AGG | 0.575054 | 3.1:+74443110 | None:intergenic |
| GGCACAAATTCCTCAGCCAT+GGG | 0.576547 | 3.1:+74444167 | None:intergenic |
| ATGGCTGTTGCTGAAAATGT+TGG | 0.578892 | 3.1:-74444506 | MS.gene06838:CDS |
| CCATGATTATTTGTTAGCGA+CGG | 0.584715 | 3.1:+74444143 | None:intergenic |
| GTTGTTGATTGTCGGGTATG+CGG | 0.593806 | 3.1:-74443296 | MS.gene06838:CDS |
| AAAGCTGAATCCCATGGCTG+AGG | 0.595003 | 3.1:-74444177 | MS.gene06838:CDS |
| TTGTACATGCAGAGAGTGCA+AGG | 0.595706 | 3.1:-74443144 | MS.gene06838:intron |
| GGGATTACCAGCATTCAACT+CGG | 0.596095 | 3.1:-74442463 | MS.gene06838:CDS |
| ATCATCTGACTCAACTGAGG+TGG | 0.609851 | 3.1:-74444429 | MS.gene06838:CDS |
| TGCATTTGTTGAGTTTGCAG+TGG | 0.610173 | 3.1:-74442438 | MS.gene06838:intron |
| ATTGCAGCTCTAAGCTGCAG+TGG | 0.625007 | 3.1:-74440987 | MS.gene06838:CDS |
| TACGAGGAGAAGAACGAGCA+CGG | 0.626781 | 3.1:+74440821 | None:intergenic |
| CTAACGGCCAAACTAACCGT+AGG | 0.628743 | 3.1:-74444046 | MS.gene06838:CDS |
| TGTTGGATTGACAGGTGCAA+TGG | 0.631796 | 3.1:+74443054 | None:intergenic |
| GCCTGTCTGGAACTATGCTG+GGG | 0.640656 | 3.1:-74443111 | MS.gene06838:CDS |
| ATGAGAAATGGTGAGAATGG+AGG | 0.651521 | 3.1:-74444245 | MS.gene06838:CDS |
| TAACGGCCAAACTAACCGTA+GGG | 0.656336 | 3.1:-74444045 | MS.gene06838:intron |
| TTATCTAGGTCCATCGACTG+AGG | 0.678332 | 3.1:-74442493 | MS.gene06838:intron |
| GTTGTCAAAGCTGAATCCCA+TGG | 0.699172 | 3.1:-74444183 | MS.gene06838:CDS |
| CGTATCATCTGACTCAACTG+AGG | 0.701261 | 3.1:-74444432 | MS.gene06838:CDS |
| AGGTGGAGAAATCGAAACCG+AGG | 0.703142 | 3.1:-74444412 | MS.gene06838:CDS |
| GATTCAGTTCATGGACTACG+AGG | 0.724532 | 3.1:+74440805 | None:intergenic |
| GATCAGGATGTGAACAACAA+CGG | 0.735570 | 3.1:-74444386 | MS.gene06838:CDS |
| TGTACATGCAGAGAGTGCAA+GGG | 0.746861 | 3.1:-74443143 | MS.gene06838:intron |
| TTGAGTCAGATGATACGACG+TGG | 0.773827 | 3.1:+74444438 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAATATTTTTCATTGTTT+TGG | - | chr3.1:74442799-74442818 | MS.gene06838:intron | 10.0% |
| !! | ACTAATTTAATCATATACAA+AGG | - | chr3.1:74441816-74441835 | MS.gene06838:intron | 15.0% |
| !! | ATTTAGTAAACTTACTTTAA+TGG | - | chr3.1:74443767-74443786 | MS.gene06838:intron | 15.0% |
| !! | TGTTTATATAATCTATTCTA+AGG | + | chr3.1:74443434-74443453 | None:intergenic | 15.0% |
| !!! | ATATTTTAGCATTTTACTAA+GGG | + | chr3.1:74444174-74444193 | None:intergenic | 15.0% |
| !!! | TAAGAAGTATAAAATTGTTA+GGG | + | chr3.1:74441238-74441257 | None:intergenic | 15.0% |
| !!! | TATATTTTAGCATTTTACTA+AGG | + | chr3.1:74444175-74444194 | None:intergenic | 15.0% |
| !!! | TTAAGAAGTATAAAATTGTT+AGG | + | chr3.1:74441239-74441258 | None:intergenic | 15.0% |
| !! | AAAAACACATCATTGTATTA+AGG | + | chr3.1:74441374-74441393 | None:intergenic | 20.0% |
| !! | AAAATAGGATGTATAGTTAT+AGG | + | chr3.1:74443072-74443091 | None:intergenic | 20.0% |
| !! | AAATAGGATGTATAGTTATA+GGG | + | chr3.1:74443071-74443090 | None:intergenic | 20.0% |
| !! | AATAATTATGCTAATGCTAA+CGG | - | chr3.1:74441257-74441276 | MS.gene06838:intron | 20.0% |
| !! | GTTTATTTATGAATTTGGAA+TGG | - | chr3.1:74443260-74443279 | MS.gene06838:CDS | 20.0% |
| !! | TAGTGAAGTTATTAATTCTA+AGG | - | chr3.1:74443617-74443636 | MS.gene06838:intron | 20.0% |
| !! | TCCAAATTCATAAATAAACA+AGG | + | chr3.1:74443259-74443278 | None:intergenic | 20.0% |
| !! | TGCTAAAATATATGAAGTAT+TGG | - | chr3.1:74444183-74444202 | MS.gene06838:CDS | 20.0% |
| !! | TTATTGACAGAAGTAAAAAT+AGG | + | chr3.1:74443087-74443106 | None:intergenic | 20.0% |
| !!! | ACTAAATGTTTTGTTTGTTT+AGG | + | chr3.1:74443754-74443773 | None:intergenic | 20.0% |
| !!! | ATTGTCATTTGTACTATTTA+GGG | - | chr3.1:74441938-74441957 | MS.gene06838:intron | 20.0% |
| !!! | TAATGATTGTTGTTTTATGT+CGG | - | chr3.1:74441591-74441610 | MS.gene06838:intron | 20.0% |
| !!! | TATTTTAGCATTTTACTAAG+GGG | + | chr3.1:74444173-74444192 | None:intergenic | 20.0% |
| !!! | TCCTTGTTTATTTATGAATT+TGG | - | chr3.1:74443255-74443274 | MS.gene06838:CDS | 20.0% |
| !!! | TGGTTTTGTTCTTAATTAAT+TGG | - | chr3.1:74444129-74444148 | MS.gene06838:CDS | 20.0% |
| ! | AGGTAAATTATTATTCACTC+TGG | + | chr3.1:74442352-74442371 | None:intergenic | 25.0% |
| ! | ATAACTTCACAAAGCAATAT+AGG | + | chr3.1:74442982-74443001 | None:intergenic | 25.0% |
| ! | CACTTTCATTTAATCTTACT+TGG | - | chr3.1:74442494-74442513 | MS.gene06838:intron | 25.0% |
| ! | CATTATATTGATATAGTCCA+TGG | - | chr3.1:74442728-74442747 | MS.gene06838:intron | 25.0% |
| ! | GTTAAAAAATATACCTTCGA+TGG | + | chr3.1:74441798-74441817 | None:intergenic | 25.0% |
| ! | TACAATTGAAGAGTTGAATA+AGG | + | chr3.1:74443493-74443512 | None:intergenic | 25.0% |
| ! | TAGTACAAATGACAATGTAA+CGG | + | chr3.1:74441934-74441953 | None:intergenic | 25.0% |
| ! | TTGAGCAAATAAAAGTAAGA+AGG | + | chr3.1:74442929-74442948 | None:intergenic | 25.0% |
| ! | TTTCATTTAATCTTACTTGG+AGG | - | chr3.1:74442497-74442516 | MS.gene06838:intron | 25.0% |
| !! | AAGAGAGAATTTGAAATTGA+CGG | + | chr3.1:74443952-74443971 | None:intergenic | 25.0% |
| !! | ATTTATTATGTTAGCTCTTG+TGG | - | chr3.1:74443179-74443198 | MS.gene06838:intron | 25.0% |
| !! | ATTTGCTGAAATTAGCTTAT+GGG | + | chr3.1:74443400-74443419 | None:intergenic | 25.0% |
| !! | CATGGACTATATCAATATAA+TGG | + | chr3.1:74442730-74442749 | None:intergenic | 25.0% |
| !! | CATTGTCATTTGTACTATTT+AGG | - | chr3.1:74441937-74441956 | MS.gene06838:intron | 25.0% |
| !! | GCAATACTAAAATGATTTGT+CGG | - | chr3.1:74441897-74441916 | MS.gene06838:intron | 25.0% |
| !! | TTTATTATGTTAGCTCTTGT+GGG | - | chr3.1:74443180-74443199 | MS.gene06838:intron | 25.0% |
| !!! | AATTTGCTGAAATTAGCTTA+TGG | + | chr3.1:74443401-74443420 | None:intergenic | 25.0% |
| !!! | ATTGTTTTGGTGTATTATCT+AGG | - | chr3.1:74442812-74442831 | MS.gene06838:intron | 25.0% |
| !!! | ATTTTAGCATTTTACTAAGG+GGG | + | chr3.1:74444172-74444191 | None:intergenic | 25.0% |
| !!! | CAAATCATTTTAGTATTGCT+TGG | + | chr3.1:74441896-74441915 | None:intergenic | 25.0% |
| !!! | TAGTAGTTTTTAATGGATCT+TGG | - | chr3.1:74442654-74442673 | MS.gene06838:intron | 25.0% |
| !!! | TTTTCTCTTGATTGTTTTTC+AGG | + | chr3.1:74443154-74443173 | None:intergenic | 25.0% |
| AACAAAATATCCATACCCTA+CGG | + | chr3.1:74441292-74441311 | None:intergenic | 30.0% | |
| AACTTCACTAATTCAAACCA+AGG | + | chr3.1:74443607-74443626 | None:intergenic | 30.0% | |
| ACAAACGAAAGAAAGAAAAG+AGG | + | chr3.1:74442372-74442391 | None:intergenic | 30.0% | |
| ACAAATGATAACTACAAACC+CGG | + | chr3.1:74443026-74443045 | None:intergenic | 30.0% | |
| ACACGTCATTTACTATTGTT+TGG | + | chr3.1:74441843-74441862 | None:intergenic | 30.0% | |
| AGAAAAGAGAAGAGATGATT+AGG | - | chr3.1:74441455-74441474 | MS.gene06838:intron | 30.0% | |
| CTCTTTCATTAATTTCCTGT+TGG | - | chr3.1:74441317-74441336 | MS.gene06838:intron | 30.0% | |
| GCAAATAAAAGTAAGAAGGT+TGG | + | chr3.1:74442925-74442944 | None:intergenic | 30.0% | |
| GCAGTGAAAATATGTTGTAA+TGG | - | chr3.1:74443303-74443322 | MS.gene06838:intron | 30.0% | |
| GCATATGACCAACAAATATT+TGG | + | chr3.1:74442111-74442130 | None:intergenic | 30.0% | |
| GGTAAACCATCATTAAGAAA+GGG | + | chr3.1:74441968-74441987 | None:intergenic | 30.0% | |
| GTGAAAATATGTTGTAATGG+TGG | - | chr3.1:74443306-74443325 | MS.gene06838:intron | 30.0% | |
| TAAACTCAATGAAGGCAAAT+CGG | + | chr3.1:74442067-74442086 | None:intergenic | 30.0% | |
| TAATAGTTCTCTTCAGAAAG+AGG | + | chr3.1:74441708-74441727 | None:intergenic | 30.0% | |
| TGATTGCTACAAATCAGATA+CGG | + | chr3.1:74442540-74442559 | None:intergenic | 30.0% | |
| TGGTAAACCATCATTAAGAA+AGG | + | chr3.1:74441969-74441988 | None:intergenic | 30.0% | |
| TTCATCTGTAAACTCAATGA+AGG | + | chr3.1:74442075-74442094 | None:intergenic | 30.0% | |
| TTCATTGAGTTTACAGATGA+AGG | - | chr3.1:74442074-74442093 | MS.gene06838:intron | 30.0% | |
| ! | ATTGACAAGAAGGTAGTTTT+GGG | - | chr3.1:74442465-74442484 | MS.gene06838:CDS | 30.0% |
| ! | GAGAGGTTAGTAGTTTTTAA+TGG | - | chr3.1:74442647-74442666 | MS.gene06838:intron | 30.0% |
| ! | TATCTGATTTGTAGCAATCA+AGG | - | chr3.1:74442540-74442559 | MS.gene06838:intron | 30.0% |
| ! | TGAAGCTGTAATTACCATTT+TGG | + | chr3.1:74440977-74440996 | None:intergenic | 30.0% |
| ! | TTGCCATGTCTTTTCTTTTT+TGG | - | chr3.1:74444263-74444282 | MS.gene06838:CDS | 30.0% |
| !! | AATGATGGATATGTGATGAA+TGG | - | chr3.1:74441050-74441069 | MS.gene06838:intron | 30.0% |
| !! | GGATGGAAATTAAAAGCATT+GGG | + | chr3.1:74443875-74443894 | None:intergenic | 30.0% |
| !! | TACAATGATGTGTTTTTCAG+AGG | - | chr3.1:74441377-74441396 | MS.gene06838:intron | 30.0% |
| !! | TACTTTTATTTGCTCAACTC+TGG | - | chr3.1:74442932-74442951 | MS.gene06838:intron | 30.0% |
| !! | TGTTGCTTGCATATTCTTTT+GGG | - | chr3.1:74443837-74443856 | MS.gene06838:CDS | 30.0% |
| !!! | AATTACCATTTTGGTGTTGA+TGG | + | chr3.1:74440968-74440987 | None:intergenic | 30.0% |
| !!! | ATGTTTTGTTTGTTTAGGAG+AGG | + | chr3.1:74443749-74443768 | None:intergenic | 30.0% |
| !!! | TAAAGGATTTTTTTACCAGG+AGG | + | chr3.1:74444040-74444059 | None:intergenic | 30.0% |
| !!! | TGCTAAAGGATTTTTTTACC+AGG | + | chr3.1:74444043-74444062 | None:intergenic | 30.0% |
| !!! | TGTTTTTCAGGACTTTTAGT+AGG | + | chr3.1:74443142-74443161 | None:intergenic | 30.0% |
| !!! | TTTTTAGTTATCCTTGCAGT+TGG | - | chr3.1:74444109-74444128 | MS.gene06838:CDS | 30.0% |
| AAAGAGAAGAGATGATTAGG+AGG | - | chr3.1:74441458-74441477 | MS.gene06838:intron | 35.0% | |
| AAGAATGGCTACACTACTAA+TGG | - | chr3.1:74441400-74441419 | MS.gene06838:intron | 35.0% | |
| ACATCATAGACAGAACGTAT+CGG | + | chr3.1:74441676-74441695 | None:intergenic | 35.0% | |
| AGCGAATCATAAAGTGGATA+TGG | - | chr3.1:74441432-74441451 | MS.gene06838:intron | 35.0% | |
| AGCTTCAAGACTCATCAAAT+GGG | - | chr3.1:74440990-74441009 | MS.gene06838:CDS | 35.0% | |
| AGGATGTATAGTTATAGGGA+GGG | + | chr3.1:74443067-74443086 | None:intergenic | 35.0% | |
| AGTAAAAGTAAAGCAGCTAC+AGG | + | chr3.1:74443914-74443933 | None:intergenic | 35.0% | |
| AGTTATTAGTCAGCTATGCT+TGG | - | chr3.1:74443577-74443596 | MS.gene06838:intron | 35.0% | |
| ATCTTAACCACTCTTATGTC+TGG | - | chr3.1:74444444-74444463 | MS.gene06838:CDS | 35.0% | |
| ATTTGATCTGATACCATCGA+AGG | - | chr3.1:74441782-74441801 | MS.gene06838:intron | 35.0% | |
| CAACTGTCCTAAAAACTTCA+GGG | - | chr3.1:74444406-74444425 | MS.gene06838:CDS | 35.0% | |
| CACCAACACCAAATATTTGT+TGG | - | chr3.1:74442100-74442119 | MS.gene06838:intron | 35.0% | |
| CACTTCTTTGAATCTATCTG+TGG | - | chr3.1:74442625-74442644 | MS.gene06838:intron | 35.0% | |
| CAGCCAAAAAAGAAAAGACA+TGG | + | chr3.1:74444269-74444288 | None:intergenic | 35.0% | |
| CAGTTTATGGTGAACAATGA+TGG | - | chr3.1:74441035-74441054 | MS.gene06838:intron | 35.0% | |
| CATAGCATCAAAAAACCAAC+AGG | + | chr3.1:74441335-74441354 | None:intergenic | 35.0% | |
| CATGAAAAGCTAAGATGGAA+AGG | + | chr3.1:74443216-74443235 | None:intergenic | 35.0% | |
| GCAAATCGGAGAATAGAATT+GGG | + | chr3.1:74442053-74442072 | None:intergenic | 35.0% | |
| GCATCTCTCTTTCTTAATTG+CGG | - | chr3.1:74441639-74441658 | MS.gene06838:intron | 35.0% | |
| GTGATGAATGGTATGAGAAA+TGG | - | chr3.1:74441062-74441081 | MS.gene06838:intron | 35.0% | |
| GTTTCAGTCTGAAGATGAAA+GGG | - | chr3.1:74442410-74442429 | MS.gene06838:intron | 35.0% | |
| TAAGAACAAAACCAACTGCA+AGG | + | chr3.1:74444123-74444142 | None:intergenic | 35.0% | |
| TAGGATGTATAGTTATAGGG+AGG | + | chr3.1:74443068-74443087 | None:intergenic | 35.0% | |
| TCAACTGTCCTAAAAACTTC+AGG | - | chr3.1:74444405-74444424 | MS.gene06838:CDS | 35.0% | |
| TGGCTTACAATGCTTATTGT+TGG | - | chr3.1:74442674-74442693 | MS.gene06838:intron | 35.0% | |
| TGTTTCAGTCTGAAGATGAA+AGG | - | chr3.1:74442409-74442428 | MS.gene06838:intron | 35.0% | |
| TTCAACCATCAACACCAAAA+TGG | - | chr3.1:74440960-74440979 | MS.gene06838:CDS | 35.0% | |
| TTTCTTTGCCTCATTCTTTC+AGG | - | chr3.1:74444298-74444317 | MS.gene06838:CDS | 35.0% | |
| TTTGCCATGAAAAGCTAAGA+TGG | + | chr3.1:74443221-74443240 | None:intergenic | 35.0% | |
| ! | AAGAGTTCCCTGAAGTTTTT+AGG | + | chr3.1:74444416-74444435 | None:intergenic | 35.0% |
| ! | CATTGACAAGAAGGTAGTTT+TGG | - | chr3.1:74442464-74442483 | MS.gene06838:CDS | 35.0% |
| ! | CCATGATTATTTGTTAGCGA+CGG | + | chr3.1:74441179-74441198 | None:intergenic | 35.0% |
| ! | GGGATGGAAATTAAAAGCAT+TGG | + | chr3.1:74443876-74443895 | None:intergenic | 35.0% |
| ! | GGTTTTCCCTTTCTTAATGA+TGG | - | chr3.1:74441959-74441978 | MS.gene06838:intron | 35.0% |
| ! | GTTGCTTGCATATTCTTTTG+GGG | - | chr3.1:74443838-74443857 | MS.gene06838:CDS | 35.0% |
| !! | AAACTCAAGCATTGAAACCA+TGG | + | chr3.1:74442748-74442767 | None:intergenic | 35.0% |
| !! | ATCTAAGAAAAGCATTACCC+TGG | + | chr3.1:74442298-74442317 | None:intergenic | 35.0% |
| !! | CTTTCCATCTTAGCTTTTCA+TGG | - | chr3.1:74443214-74443233 | MS.gene06838:intron | 35.0% |
| !! | GAAAATGTTGGTGCCAAAAT+CGG | - | chr3.1:74440825-74440844 | MS.gene06838:CDS | 35.0% |
| !! | GACCAACAAATATTTGGTGT+TGG | + | chr3.1:74442105-74442124 | None:intergenic | 35.0% |
| !! | GTTGTTTTATGTCGGAATCT+AGG | - | chr3.1:74441599-74441618 | MS.gene06838:intron | 35.0% |
| !! | TCTAAGAAAAGCATTACCCT+GGG | + | chr3.1:74442297-74442316 | None:intergenic | 35.0% |
| !! | TGTGTTTTTCAGAGGAAGAA+TGG | - | chr3.1:74441385-74441404 | MS.gene06838:intron | 35.0% |
| !! | TTTTGTTTGTTTAGGAGAGG+AGG | + | chr3.1:74443746-74443765 | None:intergenic | 35.0% |
| !!! | AGAGTTTTAAGCGTGAAATG+AGG | - | chr3.1:74441099-74441118 | MS.gene06838:intron | 35.0% |
| !!! | AGTTTTTAGAGTTTGAGTCC+TGG | - | chr3.1:74444005-74444024 | MS.gene06838:intron | 35.0% |
| !!! | CATGTCTTTTCTTTTTTGGC+TGG | - | chr3.1:74444267-74444286 | MS.gene06838:CDS | 35.0% |
| !!! | GAGTTTTAAGCGTGAAATGA+GGG | - | chr3.1:74441100-74441119 | MS.gene06838:intron | 35.0% |
| !!! | GTGTTGCTTGCATATTCTTT+TGG | - | chr3.1:74443836-74443855 | MS.gene06838:CDS | 35.0% |
| ATGAGAAATGGTGAGAATGG+AGG | - | chr3.1:74441074-74441093 | MS.gene06838:intron | 40.0% | |
| ATGGCTGTTGCTGAAAATGT+TGG | - | chr3.1:74440813-74440832 | MS.gene06838:CDS | 40.0% | |
| ATGTATAGTTATAGGGAGGG+AGG | + | chr3.1:74443064-74443083 | None:intergenic | 40.0% | |
| ATTACCCTGGGCAAAAATGT+TGG | + | chr3.1:74442285-74442304 | None:intergenic | 40.0% | |
| CAGCTTCAAGACTCATCAAA+TGG | - | chr3.1:74440989-74441008 | MS.gene06838:CDS | 40.0% | |
| CATTGTTCACCATAAACTGC+TGG | + | chr3.1:74441034-74441053 | None:intergenic | 40.0% | |
| CCGGCAGTAAAATAATCTCA+GGG | + | chr3.1:74443007-74443026 | None:intergenic | 40.0% | |
| CCGTCGCTAACAAATAATCA+TGG | - | chr3.1:74441176-74441195 | MS.gene06838:intron | 40.0% | |
| CGGTTCATCAAGTCAGAATT+TGG | - | chr3.1:74440845-74440864 | MS.gene06838:CDS | 40.0% | |
| CTGCACAAACATTGACAAGA+AGG | - | chr3.1:74442455-74442474 | MS.gene06838:CDS | 40.0% | |
| CTTTCGTTTGTGATGACTGA+TGG | - | chr3.1:74442381-74442400 | MS.gene06838:intron | 40.0% | |
| CTTTGAATCTATCTGTGGAG+AGG | - | chr3.1:74442630-74442649 | MS.gene06838:intron | 40.0% | |
| GATCAGGATGTGAACAACAA+CGG | - | chr3.1:74440933-74440952 | MS.gene06838:intron | 40.0% | |
| GGCAAAAATGTTGGATTGAC+AGG | + | chr3.1:74442276-74442295 | None:intergenic | 40.0% | |
| GGCAAATCGGAGAATAGAAT+TGG | + | chr3.1:74442054-74442073 | None:intergenic | 40.0% | |
| GGTATGAGAAATGGTGAGAA+TGG | - | chr3.1:74441071-74441090 | MS.gene06838:intron | 40.0% | |
| TAAGCGTGAAATGAGGGATT+TGG | - | chr3.1:74441106-74441125 | MS.gene06838:intron | 40.0% | |
| TCTGATATTGATCAGCTGGT+AGG | - | chr3.1:74441493-74441512 | MS.gene06838:intron | 40.0% | |
| TCTTACTTGGAGGAAATGCT+TGG | - | chr3.1:74442507-74442526 | MS.gene06838:intron | 40.0% | |
| TGAAATCCAGCGAACCTTAT+AGG | + | chr3.1:74444377-74444396 | None:intergenic | 40.0% | |
| TGTATAGTTATAGGGAGGGA+GGG | + | chr3.1:74443063-74443082 | None:intergenic | 40.0% | |
| TGTGTCTGATATTGATCAGC+TGG | - | chr3.1:74441489-74441508 | MS.gene06838:intron | 40.0% | |
| TGTTCAGAACCAGCAGTTTA+TGG | - | chr3.1:74441022-74441041 | MS.gene06838:intron | 40.0% | |
| ! | CAATCCAACATTTTTGCCCA+GGG | - | chr3.1:74442278-74442297 | MS.gene06838:intron | 40.0% |
| ! | GTTGTTGTTCACATCCTGAT+CGG | + | chr3.1:74440934-74440953 | None:intergenic | 40.0% |
| ! | TCAATCCAACATTTTTGCCC+AGG | - | chr3.1:74442277-74442296 | MS.gene06838:intron | 40.0% |
| ! | TGATTATTTGTTAGCGACGG+AGG | + | chr3.1:74441176-74441195 | None:intergenic | 40.0% |
| ! | TGCATTTGTTGAGTTTGCAG+TGG | - | chr3.1:74442881-74442900 | MS.gene06838:CDS | 40.0% |
| !! | ACAGCTTGGTTTGTGAGTTA+GGG | + | chr3.1:74444068-74444087 | None:intergenic | 40.0% |
| !! | CCCTGAGATTATTTTACTGC+CGG | - | chr3.1:74443004-74443023 | MS.gene06838:intron | 40.0% |
| !! | CCTGAGATTATTTTACTGCC+GGG | - | chr3.1:74443005-74443024 | MS.gene06838:intron | 40.0% |
| !! | CTGACTTGATGAACCGATTT+TGG | + | chr3.1:74440841-74440860 | None:intergenic | 40.0% |
| AACTCGTATTTCCTGGCTGT+AGG | - | chr3.1:74442001-74442020 | MS.gene06838:intron | 45.0% | |
| AATCATGGCTACTTAGCTGC+TGG | - | chr3.1:74441191-74441210 | MS.gene06838:intron | 45.0% | |
| ACAATCAACAACCTACAGCC+AGG | + | chr3.1:74442015-74442034 | None:intergenic | 45.0% | |
| ACAGGAGATGCGGAAAAAGT+GGG | + | chr3.1:74443896-74443915 | None:intergenic | 45.0% | |
| ACTCTCAGCCTGAAAGAATG+AGG | + | chr3.1:74444309-74444328 | None:intergenic | 45.0% | |
| ACTCTTATGTCTGGTGTGCA+GGG | - | chr3.1:74444453-74444472 | MS.gene06838:CDS | 45.0% | |
| ATCATCTGACTCAACTGAGG+TGG | - | chr3.1:74440890-74440909 | MS.gene06838:intron | 45.0% | |
| CCCGGCAGTAAAATAATCTC+AGG | + | chr3.1:74443008-74443027 | None:intergenic | 45.0% | |
| CGTATCATCTGACTCAACTG+AGG | - | chr3.1:74440887-74440906 | MS.gene06838:intron | 45.0% | |
| GCGAAGAGCGAATCATAAAG+TGG | - | chr3.1:74441426-74441445 | MS.gene06838:intron | 45.0% | |
| GGGATTACCAGCATTCAACT+CGG | - | chr3.1:74442856-74442875 | MS.gene06838:intron | 45.0% | |
| GTTGTCAAAGCTGAATCCCA+TGG | - | chr3.1:74441136-74441155 | MS.gene06838:intron | 45.0% | |
| TAAAGCAGCTACAGGAGATG+CGG | + | chr3.1:74443906-74443925 | None:intergenic | 45.0% | |
| TAACGGCCAAACTAACCGTA+GGG | - | chr3.1:74441274-74441293 | MS.gene06838:intron | 45.0% | |
| TACAGGAGATGCGGAAAAAG+TGG | + | chr3.1:74443897-74443916 | None:intergenic | 45.0% | |
| TCTCTTTCTTAATTGCGGCC+AGG | - | chr3.1:74441644-74441663 | MS.gene06838:intron | 45.0% | |
| TGTGAGTTAGGGGATGCTAA+AGG | + | chr3.1:74444057-74444076 | None:intergenic | 45.0% | |
| TGTTGGATTGACAGGTGCAA+TGG | + | chr3.1:74442268-74442287 | None:intergenic | 45.0% | |
| TTACTAAGGGGGAGAAGATC+AGG | + | chr3.1:74444161-74444180 | None:intergenic | 45.0% | |
| TTGAGTCAGATGATACGACG+TGG | + | chr3.1:74440884-74440903 | None:intergenic | 45.0% | |
| ! | AAGCTGCAGTGGTGTGATTT+TGG | - | chr3.1:74444343-74444362 | MS.gene06838:CDS | 45.0% |
| ! | AGCTGCAGTGGTGTGATTTT+GGG | - | chr3.1:74444344-74444363 | MS.gene06838:CDS | 45.0% |
| ! | AGGACTTTTAGTAGGCAGTG+TGG | + | chr3.1:74443134-74443153 | None:intergenic | 45.0% |
| ! | ATGCAATCCGAGTTGAATGC+TGG | + | chr3.1:74442866-74442885 | None:intergenic | 45.0% |
| ! | CCAGGAAATACGAGTTGACA+CGG | + | chr3.1:74441997-74442016 | None:intergenic | 45.0% |
| ! | GCTGTAGGTTGTTGATTGTC+GGG | - | chr3.1:74442016-74442035 | MS.gene06838:intron | 45.0% |
| ! | GGCTGTAGGTTGTTGATTGT+CGG | - | chr3.1:74442015-74442034 | MS.gene06838:intron | 45.0% |
| ! | GTTGTTGATTGTCGGGTATG+CGG | - | chr3.1:74442023-74442042 | MS.gene06838:intron | 45.0% |
| ! | TACGAGTTGACACGGTAACA+TGG | + | chr3.1:74441989-74442008 | None:intergenic | 45.0% |
| ! | TCCATACCCTACGGTTAGTT+TGG | + | chr3.1:74441283-74441302 | None:intergenic | 45.0% |
| ! | TGTACATGCAGAGAGTGCAA+GGG | - | chr3.1:74442176-74442195 | MS.gene06838:intron | 45.0% |
| ! | TTATCTAGGTCCATCGACTG+AGG | - | chr3.1:74442826-74442845 | MS.gene06838:intron | 45.0% |
| ! | TTGTACATGCAGAGAGTGCA+AGG | - | chr3.1:74442175-74442194 | MS.gene06838:intron | 45.0% |
| !! | AGAACGTATCGGTTACTACC+TGG | + | chr3.1:74441665-74441684 | None:intergenic | 45.0% |
| !! | CAGCTTGGTTTGTGAGTTAG+GGG | + | chr3.1:74444067-74444086 | None:intergenic | 45.0% |
| !! | GACAGCTTGGTTTGTGAGTT+AGG | + | chr3.1:74444069-74444088 | None:intergenic | 45.0% |
| !!! | GGATTTTTTTACCAGGAGGC+AGG | + | chr3.1:74444036-74444055 | None:intergenic | 45.0% |
| !!! | TTTTTTACCAGGAGGCAGGA+GGG | + | chr3.1:74444032-74444051 | None:intergenic | 45.0% |
| !!! | TTTTTTTACCAGGAGGCAGG+AGG | + | chr3.1:74444033-74444052 | None:intergenic | 45.0% |
| AAAGCTGAATCCCATGGCTG+AGG | - | chr3.1:74441142-74441161 | MS.gene06838:intron | 50.0% | |
| AGGCACAAATTCCTCAGCCA+TGG | + | chr3.1:74441156-74441175 | None:intergenic | 50.0% | |
| AGGTGGAGAAATCGAAACCG+AGG | - | chr3.1:74440907-74440926 | MS.gene06838:intron | 50.0% | |
| CACAAGTTCACTGCCAACCA+AGG | + | chr3.1:74443819-74443838 | None:intergenic | 50.0% | |
| CACTCTTATGTCTGGTGTGC+AGG | - | chr3.1:74444452-74444471 | MS.gene06838:CDS | 50.0% | |
| CAGCTATGCTTGGAACTCCT+TGG | - | chr3.1:74443587-74443606 | MS.gene06838:intron | 50.0% | |
| CCGTGTCAACTCGTATTTCC+TGG | - | chr3.1:74441994-74442013 | MS.gene06838:intron | 50.0% | |
| CTAACGGCCAAACTAACCGT+AGG | - | chr3.1:74441273-74441292 | MS.gene06838:intron | 50.0% | |
| CTGCACACCAGACATAAGAG+TGG | + | chr3.1:74444454-74444473 | None:intergenic | 50.0% | |
| GAGATGCGGAAAAAGTGGGA+TGG | + | chr3.1:74443892-74443911 | None:intergenic | 50.0% | |
| GCCAAACTAACCGTAGGGTA+TGG | - | chr3.1:74441279-74441298 | MS.gene06838:intron | 50.0% | |
| GGCACAAATTCCTCAGCCAT+GGG | + | chr3.1:74441155-74441174 | None:intergenic | 50.0% | |
| TACGAGGAGAAGAACGAGCA+CGG | + | chr3.1:74444501-74444520 | None:intergenic | 50.0% | |
| TCACTGCCAACCAAGGTAAG+CGG | + | chr3.1:74443812-74443831 | None:intergenic | 50.0% | |
| TGAGTCTCAAGCAGACAGCT+TGG | + | chr3.1:74444082-74444101 | None:intergenic | 50.0% | |
| TGGAAGGCAGCACTCTCAAT+GGG | + | chr3.1:74442239-74442258 | None:intergenic | 50.0% | |
| TTCACATCCTGATCGGTCCT+CGG | + | chr3.1:74440927-74440946 | None:intergenic | 50.0% | |
| TTGGAAGGCAGCACTCTCAA+TGG | + | chr3.1:74442240-74442259 | None:intergenic | 50.0% | |
| ! | AAGCCTGTCTGGAACTATGC+TGG | - | chr3.1:74442206-74442225 | MS.gene06838:intron | 50.0% |
| ! | AGCCTGTCTGGAACTATGCT+GGG | - | chr3.1:74442207-74442226 | MS.gene06838:intron | 50.0% |
| ! | GACAGGTGCAATGGCAGTTT+TGG | + | chr3.1:74442259-74442278 | None:intergenic | 50.0% |
| ! | TCCATCGACTGAGGCTTCTT+GGG | - | chr3.1:74442835-74442854 | MS.gene06838:intron | 50.0% |
| !! | ATTGCAGCTCTAAGCTGCAG+TGG | - | chr3.1:74444332-74444351 | MS.gene06838:CDS | 50.0% |
| !! | TTTTGGGTGCGCTGCCTATA+AGG | - | chr3.1:74444360-74444379 | MS.gene06838:CDS | 50.0% |
| !!! | GGTGCAATGGCAGTTTTGGA+AGG | + | chr3.1:74442255-74442274 | None:intergenic | 50.0% |
| ACCCCAGCATAGTTCCAGAC+AGG | + | chr3.1:74442212-74442231 | None:intergenic | 55.0% | |
| ATCGAAACCGAGGACCGATC+AGG | - | chr3.1:74440917-74440936 | MS.gene06838:intron | 55.0% | |
| CAACCAAGGTAAGCGGCAGA+AGG | + | chr3.1:74443805-74443824 | None:intergenic | 55.0% | |
| CTAGGTTACCGAAGAGCAGC+TGG | - | chr3.1:74441617-74441636 | MS.gene06838:intron | 55.0% | |
| GAGAGATGCCAGCTGCTCTT+CGG | + | chr3.1:74441628-74441647 | None:intergenic | 55.0% | |
| ! | CAACCTTCTGCCGCTTACCT+TGG | - | chr3.1:74443799-74443818 | MS.gene06838:intron | 55.0% |
| ! | CCATCGACTGAGGCTTCTTG+GGG | - | chr3.1:74442836-74442855 | MS.gene06838:intron | 55.0% |
| ! | CTTCTGCCGCTTACCTTGGT+TGG | - | chr3.1:74443803-74443822 | MS.gene06838:intron | 55.0% |
| ! | GCCTGTCTGGAACTATGCTG+GGG | - | chr3.1:74442208-74442227 | MS.gene06838:intron | 55.0% |
| ! | GTCCATCGACTGAGGCTTCT+TGG | - | chr3.1:74442834-74442853 | MS.gene06838:intron | 55.0% |
| !! | GCACGGACTGGTGTCTTTGA+CGG | + | chr3.1:74444484-74444503 | None:intergenic | 55.0% |
| AGGGCTGCTGTAAGCCTGTC+TGG | - | chr3.1:74442195-74442214 | MS.gene06838:intron | 60.0% | |
| CCCCAAGAAGCCTCAGTCGA+TGG | + | chr3.1:74442839-74442858 | None:intergenic | 60.0% | |
| GCGCTGCCTATAAGGTTCGC+TGG | - | chr3.1:74444368-74444387 | MS.gene06838:CDS | 60.0% | |
| GGAGAAGAACGAGCACGGAC+TGG | + | chr3.1:74444496-74444515 | None:intergenic | 60.0% | |
| GGGTAACCAAACCCAGCAGC+AGG | + | chr3.1:74441218-74441237 | None:intergenic | 60.0% | |
| TAGCTGCTGGACCTGCTGCT+GGG | - | chr3.1:74441204-74441223 | MS.gene06838:intron | 60.0% | |
| TTAGCTGCTGGACCTGCTGC+TGG | - | chr3.1:74441203-74441222 | MS.gene06838:intron | 60.0% | |
| GCTGGACCTGCTGCTGGGTT+TGG | - | chr3.1:74441209-74441228 | MS.gene06838:intron | 65.0% | |
| ACCAGGAGGCAGGAGGGTCC+AGG | + | chr3.1:74444026-74444045 | None:intergenic | 70.0% | |
| TCCTGGACCCTCCTGCCTCC+TGG | - | chr3.1:74444022-74444041 | MS.gene06838:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 74440813 | 74444528 | 74440813 | ID=MS.gene06838 |
| chr3.1 | mRNA | 74440813 | 74444528 | 74440813 | ID=MS.gene06838.t1;Parent=MS.gene06838 |
| chr3.1 | exon | 74444046 | 74444528 | 74444046 | ID=MS.gene06838.t1.exon1;Parent=MS.gene06838.t1 |
| chr3.1 | CDS | 74444046 | 74444528 | 74444046 | ID=cds.MS.gene06838.t1;Parent=MS.gene06838.t1 |
| chr3.1 | exon | 74443831 | 74443944 | 74443831 | ID=MS.gene06838.t1.exon2;Parent=MS.gene06838.t1 |
| chr3.1 | CDS | 74443831 | 74443944 | 74443831 | ID=cds.MS.gene06838.t1;Parent=MS.gene06838.t1 |
| chr3.1 | exon | 74443676 | 74443720 | 74443676 | ID=MS.gene06838.t1.exon3;Parent=MS.gene06838.t1 |
| chr3.1 | CDS | 74443676 | 74443720 | 74443676 | ID=cds.MS.gene06838.t1;Parent=MS.gene06838.t1 |
| chr3.1 | exon | 74443246 | 74443318 | 74443246 | ID=MS.gene06838.t1.exon4;Parent=MS.gene06838.t1 |
| chr3.1 | CDS | 74443246 | 74443318 | 74443246 | ID=cds.MS.gene06838.t1;Parent=MS.gene06838.t1 |
| chr3.1 | exon | 74443042 | 74443154 | 74443042 | ID=MS.gene06838.t1.exon5;Parent=MS.gene06838.t1 |
| chr3.1 | CDS | 74443042 | 74443154 | 74443042 | ID=cds.MS.gene06838.t1;Parent=MS.gene06838.t1 |
| chr3.1 | exon | 74442865 | 74442924 | 74442865 | ID=MS.gene06838.t1.exon6;Parent=MS.gene06838.t1 |
| chr3.1 | CDS | 74442865 | 74442924 | 74442865 | ID=cds.MS.gene06838.t1;Parent=MS.gene06838.t1 |
| chr3.1 | exon | 74442690 | 74442737 | 74442690 | ID=MS.gene06838.t1.exon7;Parent=MS.gene06838.t1 |
| chr3.1 | CDS | 74442690 | 74442737 | 74442690 | ID=cds.MS.gene06838.t1;Parent=MS.gene06838.t1 |
| chr3.1 | exon | 74442439 | 74442507 | 74442439 | ID=MS.gene06838.t1.exon8;Parent=MS.gene06838.t1 |
| chr3.1 | CDS | 74442439 | 74442507 | 74442439 | ID=cds.MS.gene06838.t1;Parent=MS.gene06838.t1 |
| chr3.1 | exon | 74440960 | 74441021 | 74440960 | ID=MS.gene06838.t1.exon9;Parent=MS.gene06838.t1 |
| chr3.1 | CDS | 74440960 | 74441021 | 74440960 | ID=cds.MS.gene06838.t1;Parent=MS.gene06838.t1 |
| chr3.1 | exon | 74440813 | 74440867 | 74440813 | ID=MS.gene06838.t1.exon10;Parent=MS.gene06838.t1 |
| chr3.1 | CDS | 74440813 | 74440867 | 74440813 | ID=cds.MS.gene06838.t1;Parent=MS.gene06838.t1 |
| Gene Sequence |
| Protein sequence |
