Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014034.t1 | RHN47771.1 | 100 | 182 | 0 | 0 | 1 | 182 | 90 | 271 | 2.60E-72 | 281.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014034.t1 | Q9SLA2 | 90.3 | 175 | 17 | 0 | 7 | 181 | 4 | 178 | 1.0e-64 | 247.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014034.t1 | G7KRP2 | 100.0 | 182 | 0 | 0 | 1 | 182 | 1 | 182 | 1.9e-72 | 281.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene017789 | MS.gene014034 | PPI |
| MS.gene014034 | MS.gene39124 | PPI |
| MS.gene014034 | MS.gene38805 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014034.t1 | MTR_7g090330 | 100.000 | 182 | 0 | 0 | 1 | 182 | 1 | 182 | 6.65e-123 | 344 |
| MS.gene014034.t1 | MTR_4g072050 | 35.669 | 157 | 95 | 3 | 20 | 176 | 8 | 158 | 6.38e-23 | 90.1 |
| MS.gene014034.t1 | MTR_8g076150 | 36.424 | 151 | 91 | 2 | 26 | 176 | 13 | 158 | 7.66e-23 | 89.7 |
| MS.gene014034.t1 | MTR_5g021690 | 35.032 | 157 | 96 | 3 | 20 | 176 | 8 | 158 | 1.84e-22 | 89.0 |
| MS.gene014034.t1 | MTR_4g010220 | 71.930 | 57 | 11 | 1 | 1 | 57 | 1 | 52 | 1.08e-13 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014034.t1 | AT2G25610 | 92.000 | 175 | 14 | 0 | 7 | 181 | 4 | 178 | 4.61e-111 | 314 |
| MS.gene014034.t1 | AT2G25610 | 92.000 | 175 | 14 | 0 | 7 | 181 | 53 | 227 | 7.24e-111 | 315 |
| MS.gene014034.t1 | AT4G32530 | 93.023 | 172 | 12 | 0 | 10 | 181 | 9 | 180 | 1.27e-110 | 313 |
| MS.gene014034.t1 | AT4G32530 | 79.208 | 202 | 12 | 1 | 10 | 181 | 9 | 210 | 2.18e-103 | 296 |
| MS.gene014034.t1 | AT1G19910 | 35.669 | 157 | 95 | 3 | 20 | 176 | 9 | 159 | 6.16e-23 | 90.1 |
| MS.gene014034.t1 | AT1G75630 | 35.669 | 157 | 95 | 3 | 20 | 176 | 10 | 160 | 6.45e-23 | 90.1 |
| MS.gene014034.t1 | AT4G38920 | 35.669 | 157 | 95 | 3 | 20 | 176 | 8 | 158 | 6.69e-23 | 90.1 |
| MS.gene014034.t1 | AT4G34720 | 35.669 | 157 | 95 | 3 | 20 | 176 | 8 | 158 | 6.69e-23 | 90.1 |
| MS.gene014034.t1 | AT2G16510 | 35.669 | 157 | 95 | 3 | 20 | 176 | 8 | 158 | 6.69e-23 | 90.1 |
| MS.gene014034.t1 | AT4G38920 | 37.226 | 137 | 81 | 2 | 40 | 176 | 1 | 132 | 5.86e-22 | 86.7 |
| MS.gene014034.t1 | AT4G34720 | 37.226 | 137 | 81 | 2 | 40 | 176 | 5 | 136 | 8.13e-22 | 86.7 |
| MS.gene014034.t1 | AT1G75630 | 29.843 | 191 | 94 | 5 | 20 | 176 | 10 | 194 | 5.39e-16 | 72.8 |
| MS.gene014034.t1 | AT1G19910 | 31.624 | 117 | 74 | 3 | 20 | 136 | 9 | 119 | 8.25e-11 | 57.4 |
Find 33 sgRNAs with CRISPR-Local
Find 179 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTCATAGATACTTGATTT+TGG | 0.177979 | 7.2:+18313999 | None:intergenic |
| GGTAGTGCGCTTGGCCTATT+TGG | 0.238231 | 7.2:-18313701 | MS.gene014034:CDS |
| TATCCAGCTCTAAGAGATTC+TGG | 0.324274 | 7.2:+18313978 | None:intergenic |
| GGATATGCAATCTTTGCTTC+TGG | 0.326193 | 7.2:-18313960 | MS.gene014034:CDS |
| TGTGAAGCTGTTGCTATATA+TGG | 0.352411 | 7.2:-18314065 | MS.gene014034:CDS |
| ATTCTTGTGATTGAGATCTT+TGG | 0.353130 | 7.2:-18313722 | MS.gene014034:CDS |
| GGCCTATTTGGAGTTATTGT+TGG | 0.370654 | 7.2:-18313689 | MS.gene014034:CDS |
| TTGCAGCGCATTCAAGCTCT+TGG | 0.376310 | 7.2:-18316607 | MS.gene014034:CDS |
| TTTGCTTCTGGACTTATTGT+GGG | 0.379757 | 7.2:-18313948 | MS.gene014034:CDS |
| AGGTTGTGTGTAGGCATAAT+TGG | 0.380831 | 7.2:-18313794 | MS.gene014034:CDS |
| TTCCAACAATAACTCCAAAT+AGG | 0.387180 | 7.2:+18313687 | None:intergenic |
| CTTTGCTTCTGGACTTATTG+TGG | 0.393040 | 7.2:-18313949 | MS.gene014034:CDS |
| GGCGATACCGATTGCGGAAA+AGG | 0.405375 | 7.2:+18316553 | None:intergenic |
| CTTGGGCTGCAGCACTCGTC+AGG | 0.412435 | 7.2:-18316589 | MS.gene014034:CDS |
| TCTCCGTTCTCGGCGCTGCT+TGG | 0.425603 | 7.2:-18316517 | MS.gene014034:intron |
| GCTTCGCAAATCTTGTTTGT+GGG | 0.438334 | 7.2:-18313926 | MS.gene014034:intron |
| TGCAGCGCATTCAAGCTCTT+GGG | 0.466822 | 7.2:-18316606 | MS.gene014034:CDS |
| TCTATCGGTGTCTCCGTTCT+CGG | 0.467994 | 7.2:-18316527 | MS.gene014034:CDS |
| GAGATCTTTGGTAGTGCGCT+TGG | 0.473123 | 7.2:-18313710 | MS.gene014034:CDS |
| TTTGATCGGTGCTGCTATCA+AGG | 0.480937 | 7.2:-18316384 | MS.gene014034:CDS |
| ATCGGTATCGCCGTCTCTAT+CGG | 0.483284 | 7.2:-18316542 | MS.gene014034:CDS |
| CCGATTGCGGAAAAGGTGTA+TGG | 0.489744 | 7.2:+18316560 | None:intergenic |
| GGCTTCGCAAATCTTGTTTG+TGG | 0.492697 | 7.2:-18313927 | MS.gene014034:CDS |
| GAACCAGAATCTCTTAGAGC+TGG | 0.512261 | 7.2:-18313981 | MS.gene014034:CDS |
| TGTTGTTGCAGGTTGTGTGT+AGG | 0.535435 | 7.2:-18313803 | MS.gene014034:intron |
| TGAAGGGGAATTTACATCAC+CGG | 0.569427 | 7.2:-18316413 | MS.gene014034:intron |
| ATCACCGGTAGTAGTTTGAT+CGG | 0.575017 | 7.2:-18316398 | MS.gene014034:CDS |
| TTACCAAGCAGCGCCGAGAA+CGG | 0.608209 | 7.2:+18316514 | None:intergenic |
| AGCACCGATCAAACTACTAC+CGG | 0.613839 | 7.2:+18316394 | None:intergenic |
| AACGGAGACACCGATAGAGA+CGG | 0.614106 | 7.2:+18316532 | None:intergenic |
| GTGCTGCTATCAAGGCTCCA+AGG | 0.615656 | 7.2:-18316376 | MS.gene014034:CDS |
| AGAGACGGCGATACCGATTG+CGG | 0.644220 | 7.2:+18316547 | None:intergenic |
| TTATGTCAGCTCAAGCAACA+TGG | 0.667422 | 7.2:-18313661 | MS.gene014034:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAATTTCTTTCTTTTTT+TGG | + | chr7.2:18315682-18315701 | None:intergenic | 10.0% |
| !! | AATCAGAAAAAAATTATTGA+GGG | - | chr7.2:18314658-18314677 | MS.gene014034:intron | 15.0% |
| !! | ATGAAAATGATAAAGAAAAA+AGG | - | chr7.2:18314491-18314510 | MS.gene014034:intron | 15.0% |
| !! | CTAAAAAAACACAAATTTAA+AGG | + | chr7.2:18313965-18313984 | None:intergenic | 15.0% |
| !! | TAAATATCACATAAAATACA+GGG | + | chr7.2:18315986-18316005 | None:intergenic | 15.0% |
| !!! | ATGTAAATGTTTTACTTTTT+TGG | - | chr7.2:18314263-18314282 | MS.gene014034:intron | 15.0% |
| !!! | TGTAAAAAATTACCTAATTT+TGG | + | chr7.2:18315232-18315251 | None:intergenic | 15.0% |
| !! | AAATAATGAGACATCAAAAT+AGG | - | chr7.2:18314691-18314710 | MS.gene014034:intron | 20.0% |
| !! | AAGTAAAACATTTACATCAA+AGG | + | chr7.2:18314260-18314279 | None:intergenic | 20.0% |
| !! | AATACAAACTTAAACGTAAA+AGG | + | chr7.2:18316072-18316091 | None:intergenic | 20.0% |
| !! | ATCAGAAAAAAATTATTGAG+GGG | - | chr7.2:18314659-18314678 | MS.gene014034:intron | 20.0% |
| !! | ATGTTTAATGCTTAATATCA+TGG | - | chr7.2:18314157-18314176 | MS.gene014034:intron | 20.0% |
| !! | CTAAATATCACATAAAATAC+AGG | + | chr7.2:18315987-18316006 | None:intergenic | 20.0% |
| !! | GAATCAGAAAAAAATTATTG+AGG | - | chr7.2:18314657-18314676 | MS.gene014034:intron | 20.0% |
| !! | TAAACAACAGATTCAAATAA+CGG | + | chr7.2:18313830-18313849 | None:intergenic | 20.0% |
| !!! | AAACAAGTGAAATAATTTTG+TGG | - | chr7.2:18315428-18315447 | MS.gene014034:intron | 20.0% |
| !!! | AAGAGATAATTTGATTTGAA+AGG | + | chr7.2:18313806-18313825 | None:intergenic | 20.0% |
| !!! | AGAGATAATTTGATTTGAAA+GGG | + | chr7.2:18313805-18313824 | None:intergenic | 20.0% |
| ! | AAATGAGGAAGTTAATTACT+AGG | - | chr7.2:18314204-18314223 | MS.gene014034:intron | 25.0% |
| ! | AATAATTGAGTATGTAGAAC+AGG | + | chr7.2:18316447-18316466 | None:intergenic | 25.0% |
| ! | ACAACAATATCTTGTATGTA+TGG | + | chr7.2:18315127-18315146 | None:intergenic | 25.0% |
| ! | AGGGGAAAATTGAAAAAAAT+AGG | + | chr7.2:18313786-18313805 | None:intergenic | 25.0% |
| ! | ATTGCTTCAGAAAAATGTTT+AGG | - | chr7.2:18314942-18314961 | MS.gene014034:intron | 25.0% |
| ! | CAAAGTGATACTCTAATTAT+TGG | - | chr7.2:18315620-18315639 | MS.gene014034:intron | 25.0% |
| ! | GAATATTTCCGTAAATTCAT+GGG | - | chr7.2:18315580-18315599 | MS.gene014034:intron | 25.0% |
| ! | GCTAAACAAATGGTTAATTA+AGG | - | chr7.2:18315953-18315972 | MS.gene014034:intron | 25.0% |
| ! | GCTCATAATAAATGATCATT+TGG | - | chr7.2:18314422-18314441 | MS.gene014034:intron | 25.0% |
| ! | GGGGAAAATTGAAAAAAATA+GGG | + | chr7.2:18313785-18313804 | None:intergenic | 25.0% |
| ! | GTAACATGATATATAACAAG+TGG | - | chr7.2:18315469-18315488 | MS.gene014034:intron | 25.0% |
| ! | GTTACTTGTAGTAATTAAGT+CGG | - | chr7.2:18315181-18315200 | MS.gene014034:intron | 25.0% |
| ! | TCAGAAAAAAATTATTGAGG+GGG | - | chr7.2:18314660-18314679 | MS.gene014034:intron | 25.0% |
| ! | TGAATATTTCCGTAAATTCA+TGG | - | chr7.2:18315579-18315598 | MS.gene014034:intron | 25.0% |
| ! | TTCCAGAAACAAATTCTATT+TGG | + | chr7.2:18315256-18315275 | None:intergenic | 25.0% |
| ! | TTGTTTATGTAATGGTTGAA+GGG | - | chr7.2:18313843-18313862 | MS.gene014034:intron | 25.0% |
| !! | AACCAAATAGAATTTGTTTC+TGG | - | chr7.2:18315251-18315270 | MS.gene014034:intron | 25.0% |
| !! | TACATACCTAATGAGATTTT+TGG | + | chr7.2:18313929-18313948 | None:intergenic | 25.0% |
| !! | TCACAATACTGTTTTATAGA+AGG | - | chr7.2:18314869-18314888 | MS.gene014034:intron | 25.0% |
| !! | TGAATCTGTTGTTTATGTAA+TGG | - | chr7.2:18313835-18313854 | MS.gene014034:intron | 25.0% |
| !! | TTATTTTCCTACAGAACAAT+TGG | + | chr7.2:18314590-18314609 | None:intergenic | 25.0% |
| !!! | CTAGTTTCTTTTTAGTTGAA+AGG | - | chr7.2:18314181-18314200 | MS.gene014034:intron | 25.0% |
| !!! | GAGATAATTTGATTTGAAAG+GGG | + | chr7.2:18313804-18313823 | None:intergenic | 25.0% |
| !!! | GGATAATATTCACTTTTGAT+TGG | - | chr7.2:18315202-18315221 | MS.gene014034:intron | 25.0% |
| !!! | TCAATTATTTTTGTTGTTGC+AGG | - | chr7.2:18316458-18316477 | MS.gene014034:intron | 25.0% |
| !!! | TTTCTTTCTTTTTTTGGTCA+AGG | + | chr7.2:18315676-18315695 | None:intergenic | 25.0% |
| !!! | TTTTTAGTTGAAAGGAAATG+AGG | - | chr7.2:18314189-18314208 | MS.gene014034:intron | 25.0% |
| AAAGCATGGTAAAATGATTG+TGG | - | chr7.2:18315736-18315755 | MS.gene014034:intron | 30.0% | |
| AAAGGAATTGTTATAGAGCT+TGG | - | chr7.2:18314110-18314129 | MS.gene014034:intron | 30.0% | |
| AACTATCAAAAAAGACCCAA+AGG | - | chr7.2:18315302-18315321 | MS.gene014034:intron | 30.0% | |
| AAGCGATATTACTATGTATC+TGG | - | chr7.2:18314364-18314383 | MS.gene014034:intron | 30.0% | |
| AATCACGCAGAACAAAAATT+TGG | + | chr7.2:18315030-18315049 | None:intergenic | 30.0% | |
| AATGTGAGATTCTTACATGA+TGG | + | chr7.2:18315917-18315936 | None:intergenic | 30.0% | |
| ACAGTTCATAGTGAAAATCT+TGG | + | chr7.2:18315854-18315873 | None:intergenic | 30.0% | |
| ATCATTTGGTCTGATATGAA+GGG | - | chr7.2:18314436-18314455 | MS.gene014034:intron | 30.0% | |
| ATTCTTGTGATTGAGATCTT+TGG | - | chr7.2:18316550-18316569 | MS.gene014034:CDS | 30.0% | |
| CAGAAAAAAATTATTGAGGG+GGG | - | chr7.2:18314661-18314680 | MS.gene014034:intron | 30.0% | |
| GGTTAATAACTAATACTACC+AGG | + | chr7.2:18315106-18315125 | None:intergenic | 30.0% | |
| GTTGTTTATGTAATGGTTGA+AGG | - | chr7.2:18313842-18313861 | MS.gene014034:intron | 30.0% | |
| TCACTGTGTAATCATACAAT+TGG | - | chr7.2:18314544-18314563 | MS.gene014034:intron | 30.0% | |
| TCACTTCCAAAAATCTCATT+AGG | - | chr7.2:18313920-18313939 | MS.gene014034:intron | 30.0% | |
| TGTTTATGTAATGGTTGAAG+GGG | - | chr7.2:18313844-18313863 | MS.gene014034:intron | 30.0% | |
| TTCCAACAATAACTCCAAAT+AGG | + | chr7.2:18316588-18316607 | None:intergenic | 30.0% | |
| TTTGATGCAAGGAAAATCAA+AGG | + | chr7.2:18315719-18315738 | None:intergenic | 30.0% | |
| ! | CAAGTGAAATAATTTTGTGG+AGG | - | chr7.2:18315431-18315450 | MS.gene014034:intron | 30.0% |
| ! | CACATTTTCTCAAACCTTTA+AGG | - | chr7.2:18315931-18315950 | MS.gene014034:intron | 30.0% |
| ! | CTCGATGATAAGTTTTACAA+TGG | - | chr7.2:18314004-18314023 | MS.gene014034:CDS | 30.0% |
| ! | CTGTTGATTGAACTTAGATA+GGG | - | chr7.2:18314044-18314063 | MS.gene014034:CDS | 30.0% |
| ! | GGTTCATAGATACTTGATTT+TGG | + | chr7.2:18316276-18316295 | None:intergenic | 30.0% |
| ! | GTTTTGCTTTGATTGATGTT+TGG | - | chr7.2:18314082-18314101 | MS.gene014034:intron | 30.0% |
| ! | TCTGTTGATTGAACTTAGAT+AGG | - | chr7.2:18314043-18314062 | MS.gene014034:CDS | 30.0% |
| !! | AACCATTTGTTTAGCCTTAA+AGG | + | chr7.2:18315948-18315967 | None:intergenic | 30.0% |
| !! | AACCTTTAAGGCTAAACAAA+TGG | - | chr7.2:18315943-18315962 | MS.gene014034:intron | 30.0% |
| !! | TTGACTTTGACTTGACAATA+TGG | - | chr7.2:18316150-18316169 | MS.gene014034:intron | 30.0% |
| !!! | ATCTGTCATTTTTAGTGTTG+AGG | - | chr7.2:18314335-18314354 | MS.gene014034:intron | 30.0% |
| !!! | GGTCTTTTTTGATAGTTTTC+TGG | + | chr7.2:18315299-18315318 | None:intergenic | 30.0% |
| !!! | GTTACTTTTGTTGCTTTGTT+TGG | - | chr7.2:18315151-18315170 | MS.gene014034:intron | 30.0% |
| !!! | GTTTTGGTTATGTTTTACAG+AGG | - | chr7.2:18315800-18315819 | MS.gene014034:intron | 30.0% |
| !!! | TACTTTTTTGGCGACTTAAT+GGG | - | chr7.2:18314275-18314294 | MS.gene014034:intron | 30.0% |
| !!! | TTACTTTTTTGGCGACTTAA+TGG | - | chr7.2:18314274-18314293 | MS.gene014034:intron | 30.0% |
| !!! | TTTTCTGAAGCAATTGTTGA+GGG | + | chr7.2:18314936-18314955 | None:intergenic | 30.0% |
| !!! | TTTTTCTGAAGCAATTGTTG+AGG | + | chr7.2:18314937-18314956 | None:intergenic | 30.0% |
| AAAAAAATTATTGAGGGGGG+TGG | - | chr7.2:18314664-18314683 | MS.gene014034:intron | 35.0% | |
| AAAAAATTATTGAGGGGGGT+GGG | - | chr7.2:18314665-18314684 | MS.gene014034:intron | 35.0% | |
| AGAATTCTCATGGAGAATGT+AGG | - | chr7.2:18316407-18316426 | MS.gene014034:CDS | 35.0% | |
| AGAGCTCAACACATAATCTT+TGG | - | chr7.2:18315760-18315779 | MS.gene014034:intron | 35.0% | |
| ATTGAGTATGTAGAACAGGA+TGG | + | chr7.2:18316443-18316462 | None:intergenic | 35.0% | |
| ATTTCCGTAAATTCATGGGT+CGG | - | chr7.2:18315584-18315603 | MS.gene014034:intron | 35.0% | |
| CATCTTCACAAGAATTCTCA+TGG | - | chr7.2:18316397-18316416 | MS.gene014034:CDS | 35.0% | |
| CTACATCAATTAAACGACAC+TGG | + | chr7.2:18315074-18315093 | None:intergenic | 35.0% | |
| GAATTCTCATGGAGAATGTA+GGG | - | chr7.2:18316408-18316427 | MS.gene014034:CDS | 35.0% | |
| GATCATTTGGTCTGATATGA+AGG | - | chr7.2:18314435-18314454 | MS.gene014034:intron | 35.0% | |
| GTGTTTAGATCAAGCTTACT+CGG | + | chr7.2:18315885-18315904 | None:intergenic | 35.0% | |
| TATGTAGAACAGGATGGATA+AGG | + | chr7.2:18316437-18316456 | None:intergenic | 35.0% | |
| TGATTACACAGTGAGTTTAG+TGG | + | chr7.2:18314538-18314557 | None:intergenic | 35.0% | |
| TGTGAAGCTGTTGCTATATA+TGG | - | chr7.2:18316207-18316226 | MS.gene014034:intron | 35.0% | |
| TTGATTGGCACACCAAAATT+AGG | - | chr7.2:18315217-18315236 | MS.gene014034:intron | 35.0% | |
| TTGCTTTGATTGATGTTTGG+AGG | - | chr7.2:18314085-18314104 | MS.gene014034:intron | 35.0% | |
| TTGTGAAGATGTGAATATGC+AGG | + | chr7.2:18316388-18316407 | None:intergenic | 35.0% | |
| TTTGCTTCTGGACTTATTGT+GGG | - | chr7.2:18316324-18316343 | MS.gene014034:intron | 35.0% | |
| ! | AACACATAATCTTTGGCTTC+TGG | - | chr7.2:18315767-18315786 | MS.gene014034:intron | 35.0% |
| ! | AAGAATTTTCACGAAGAGAG+AGG | + | chr7.2:18316536-18316555 | None:intergenic | 35.0% |
| ! | ATTTTCCTTGCATCAAAGCA+TGG | - | chr7.2:18315722-18315741 | MS.gene014034:intron | 35.0% |
| ! | TTACATTTGAGTGTTGTGAG+TGG | - | chr7.2:18316039-18316058 | MS.gene014034:intron | 35.0% |
| ! | TTTTACCATGCTTTGATGCA+AGG | + | chr7.2:18315730-18315749 | None:intergenic | 35.0% |
| !! | AGATTTTTGGAAGTGATCCT+TGG | + | chr7.2:18313916-18313935 | None:intergenic | 35.0% |
| !! | GTTCTGCGTGATTTGTTTAA+AGG | - | chr7.2:18315037-18315056 | MS.gene014034:intron | 35.0% |
| !! | TTTCTGAAGCAATTGTTGAG+GGG | + | chr7.2:18314935-18314954 | None:intergenic | 35.0% |
| !! | TTTGATAGTTTTCTGGTGTC+TGG | + | chr7.2:18315292-18315311 | None:intergenic | 35.0% |
| !!! | TGTCATTTTTAGTGTTGAGG+AGG | - | chr7.2:18314338-18314357 | MS.gene014034:intron | 35.0% |
| AGGTTGTGTGTAGGCATAAT+TGG | - | chr7.2:18316478-18316497 | MS.gene014034:intron | 40.0% | |
| ATCACCGGTAGTAGTTTGAT+CGG | - | chr7.2:18313874-18313893 | MS.gene014034:intron | 40.0% | |
| CTTTGCTTCTGGACTTATTG+TGG | - | chr7.2:18316323-18316342 | MS.gene014034:intron | 40.0% | |
| CTTTGGTCCAATTGTTCTGT+AGG | - | chr7.2:18314580-18314599 | MS.gene014034:intron | 40.0% | |
| GATTGATGTTTGGAGGAGAA+AGG | - | chr7.2:18314092-18314111 | MS.gene014034:intron | 40.0% | |
| GGATATGCAATCTTTGCTTC+TGG | - | chr7.2:18316312-18316331 | MS.gene014034:intron | 40.0% | |
| GTTCCAAATACAACCGTTTG+TGG | - | chr7.2:18316124-18316143 | MS.gene014034:intron | 40.0% | |
| TAAGCCAACGATTGACCTTT+GGG | + | chr7.2:18315320-18315339 | None:intergenic | 40.0% | |
| TATCCCGACCCATGAATTTA+CGG | + | chr7.2:18315591-18315610 | None:intergenic | 40.0% | |
| TCAAAGTCAAGTGCCACAAA+CGG | + | chr7.2:18316140-18316159 | None:intergenic | 40.0% | |
| TGAAGGGGAATTTACATCAC+CGG | - | chr7.2:18313859-18313878 | MS.gene014034:intron | 40.0% | |
| TTAAGCCAACGATTGACCTT+TGG | + | chr7.2:18315321-18315340 | None:intergenic | 40.0% | |
| TTACACAGTGAGTTTAGTGG+AGG | + | chr7.2:18314535-18314554 | None:intergenic | 40.0% | |
| TTATGTCAGCTCAAGCAACA+TGG | - | chr7.2:18316611-18316630 | MS.gene014034:CDS | 40.0% | |
| TTGATGTAGCTAACTTCACC+TGG | - | chr7.2:18315085-18315104 | MS.gene014034:intron | 40.0% | |
| TTTCCGTAAATTCATGGGTC+GGG | - | chr7.2:18315585-18315604 | MS.gene014034:intron | 40.0% | |
| ! | CGCTTTCTAATTTTGTCTGC+AGG | + | chr7.2:18316251-18316270 | None:intergenic | 40.0% |
| ! | CTAGCTCATTTGGTTTAGTG+TGG | - | chr7.2:18314791-18314810 | MS.gene014034:intron | 40.0% |
| ! | GCTTCGCAAATCTTGTTTGT+GGG | - | chr7.2:18316346-18316365 | MS.gene014034:intron | 40.0% |
| ! | GGCCTATTTGGAGTTATTGT+TGG | - | chr7.2:18316583-18316602 | MS.gene014034:CDS | 40.0% |
| !! | TATCCAGCTCTAAGAGATTC+TGG | + | chr7.2:18316297-18316316 | None:intergenic | 40.0% |
| !! | TTCTGGTGTGTGTTTGGTTT+TGG | - | chr7.2:18315784-18315803 | MS.gene014034:intron | 40.0% |
| !! | TTTTTGGCGACTTAATGGGT+GGG | - | chr7.2:18314279-18314298 | MS.gene014034:intron | 40.0% |
| !!! | TTTTTTGGCGACTTAATGGG+TGG | - | chr7.2:18314278-18314297 | MS.gene014034:intron | 40.0% |
| AACCAAATGAGCTAGTGCAG+AGG | + | chr7.2:18314786-18314805 | None:intergenic | 45.0% | |
| AAGACCCAAAGGTCAATCGT+TGG | - | chr7.2:18315313-18315332 | MS.gene014034:intron | 45.0% | |
| ACCAAATGAGCTAGTGCAGA+GGG | + | chr7.2:18314785-18314804 | None:intergenic | 45.0% | |
| ATGTCACTGGTACACCCAAA+TGG | + | chr7.2:18314825-18314844 | None:intergenic | 45.0% | |
| GAACCAGAATCTCTTAGAGC+TGG | - | chr7.2:18316291-18316310 | MS.gene014034:intron | 45.0% | |
| GGTGTACCAGTGACATCAAT+CGG | - | chr7.2:18314829-18314848 | MS.gene014034:intron | 45.0% | |
| GTGCCACAAACGGTTGTATT+TGG | + | chr7.2:18316130-18316149 | None:intergenic | 45.0% | |
| TCACCACTGTGTTGTGTTAG+AGG | - | chr7.2:18314632-18314651 | MS.gene014034:intron | 45.0% | |
| TCTAACACAACACAGTGGTG+AGG | + | chr7.2:18314633-18314652 | None:intergenic | 45.0% | |
| TGTTGTTGCAGGTTGTGTGT+AGG | - | chr7.2:18316469-18316488 | MS.gene014034:intron | 45.0% | |
| ! | AGTGTGGTTTGTCCTCCATT+TGG | - | chr7.2:18314807-18314826 | MS.gene014034:intron | 45.0% |
| ! | CCATACACCTTTTCCGCAAT+CGG | - | chr7.2:18313712-18313731 | MS.gene014034:CDS | 45.0% |
| ! | GGCTTCGCAAATCTTGTTTG+TGG | - | chr7.2:18316345-18316364 | MS.gene014034:intron | 45.0% |
| ! | GTGTGGTTTGTCCTCCATTT+GGG | - | chr7.2:18314808-18314827 | MS.gene014034:intron | 45.0% |
| ! | TGGACCAAAGTGCTTTGTTG+TGG | + | chr7.2:18314570-18314589 | None:intergenic | 45.0% |
| ! | TTGGCCACAACAAAGCACTT+TGG | - | chr7.2:18314563-18314582 | MS.gene014034:intron | 45.0% |
| ! | TTTGGCTTCTGGTGTGTGTT+TGG | - | chr7.2:18315778-18315797 | MS.gene014034:intron | 45.0% |
| !! | AGCACCGATCAAACTACTAC+CGG | + | chr7.2:18313881-18313900 | None:intergenic | 45.0% |
| !! | TTTGATCGGTGCTGCTATCA+AGG | - | chr7.2:18313888-18313907 | MS.gene014034:intron | 45.0% |
| AAATTATTGAGGGGGGTGGG+AGG | - | chr7.2:18314668-18314687 | MS.gene014034:intron | 50.0% | |
| AACGGAGACACCGATAGAGA+CGG | + | chr7.2:18313743-18313762 | None:intergenic | 50.0% | |
| AGACAGCCGATTGATGTCAC+TGG | + | chr7.2:18314838-18314857 | None:intergenic | 50.0% | |
| AGTGCAGAGGGAAGTTGACA+TGG | + | chr7.2:18314773-18314792 | None:intergenic | 50.0% | |
| ATCGGTATCGCCGTCTCTAT+CGG | - | chr7.2:18313730-18313749 | MS.gene014034:CDS | 50.0% | |
| CCACTGTGTTGTGTTAGAGG+CGG | - | chr7.2:18314635-18314654 | MS.gene014034:intron | 50.0% | |
| TCACTGGTACACCCAAATGG+AGG | + | chr7.2:18314822-18314841 | None:intergenic | 50.0% | |
| TCCCTCTGCACTAGCTCATT+TGG | - | chr7.2:18314781-18314800 | MS.gene014034:intron | 50.0% | |
| TGCAGCGCATTCAAGCTCTT+GGG | - | chr7.2:18313666-18313685 | MS.gene014034:CDS | 50.0% | |
| TGGAACTATTGCTGCTGTGC+AGG | + | chr7.2:18316110-18316129 | None:intergenic | 50.0% | |
| TTGCAGCGCATTCAAGCTCT+TGG | - | chr7.2:18313665-18313684 | MS.gene014034:CDS | 50.0% | |
| ! | AAGCCTTATCCCACTCTAGG+TGG | + | chr7.2:18315376-18315395 | None:intergenic | 50.0% |
| ! | CCGATTGCGGAAAAGGTGTA+TGG | + | chr7.2:18313715-18313734 | None:intergenic | 50.0% |
| ! | GCTAAGCCTTATCCCACTCT+AGG | + | chr7.2:18315379-18315398 | None:intergenic | 50.0% |
| ! | TCTATCGGTGTCTCCGTTCT+CGG | - | chr7.2:18313745-18313764 | MS.gene014034:CDS | 50.0% |
| !! | GAGATCTTTGGTAGTGCGCT+TGG | - | chr7.2:18316562-18316581 | MS.gene014034:CDS | 50.0% |
| ACGCCACCTAGAGTGGGATA+AGG | - | chr7.2:18315370-18315389 | MS.gene014034:intron | 55.0% | |
| CCGCCTCTAACACAACACAG+TGG | + | chr7.2:18314638-18314657 | None:intergenic | 55.0% | |
| GGTAGTGCGCTTGGCCTATT+TGG | - | chr7.2:18316571-18316590 | MS.gene014034:CDS | 55.0% | |
| TATCCCACTCTAGGTGGCGT+CGG | + | chr7.2:18315370-18315389 | None:intergenic | 55.0% | |
| ! | AGAGACGGCGATACCGATTG+CGG | + | chr7.2:18313728-18313747 | None:intergenic | 55.0% |
| ! | GGCGATACCGATTGCGGAAA+AGG | + | chr7.2:18313722-18313741 | None:intergenic | 55.0% |
| ! | GTGCTGCTATCAAGGCTCCA+AGG | - | chr7.2:18313896-18313915 | MS.gene014034:intron | 55.0% |
| ! | TTACCAAGCAGCGCCGAGAA+CGG | + | chr7.2:18313761-18313780 | None:intergenic | 55.0% |
| TAGCCGACGCCACCTAGAGT+GGG | - | chr7.2:18315364-18315383 | MS.gene014034:intron | 60.0% | |
| CTTGGGCTGCAGCACTCGTC+AGG | - | chr7.2:18313683-18313702 | MS.gene014034:CDS | 65.0% | |
| GTAGCCGACGCCACCTAGAG+TGG | - | chr7.2:18315363-18315382 | MS.gene014034:intron | 65.0% | |
| TCTCCGTTCTCGGCGCTGCT+TGG | - | chr7.2:18313755-18313774 | MS.gene014034:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 18313646 | 18316648 | 18313646 | ID=MS.gene014034 |
| chr7.2 | mRNA | 18313646 | 18316648 | 18313646 | ID=MS.gene014034.t1;Parent=MS.gene014034 |
| chr7.2 | exon | 18316518 | 18316648 | 18316518 | ID=MS.gene014034.t1.exon1;Parent=MS.gene014034.t1 |
| chr7.2 | CDS | 18316518 | 18316648 | 18316518 | ID=cds.MS.gene014034.t1;Parent=MS.gene014034.t1 |
| chr7.2 | exon | 18316353 | 18316430 | 18316353 | ID=MS.gene014034.t1.exon2;Parent=MS.gene014034.t1 |
| chr7.2 | CDS | 18316353 | 18316430 | 18316353 | ID=cds.MS.gene014034.t1;Parent=MS.gene014034.t1 |
| chr7.2 | exon | 18313927 | 18314097 | 18313927 | ID=MS.gene014034.t1.exon3;Parent=MS.gene014034.t1 |
| chr7.2 | CDS | 18313927 | 18314097 | 18313927 | ID=cds.MS.gene014034.t1;Parent=MS.gene014034.t1 |
| chr7.2 | exon | 18313646 | 18313814 | 18313646 | ID=MS.gene014034.t1.exon4;Parent=MS.gene014034.t1 |
| chr7.2 | CDS | 18313646 | 18313814 | 18313646 | ID=cds.MS.gene014034.t1;Parent=MS.gene014034.t1 |
| Gene Sequence |
| Protein sequence |
