AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene014614

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene014614.t1 MTR_3g110240 98.036 662 11 2 25 685 21 681 0.0 1355
MS.gene014614.t1 MTR_1g007150 79.360 688 132 5 2 685 3 684 0.0 1126
MS.gene014614.t1 MTR_7g006030 78.130 599 121 2 92 684 4 598 0.0 1018
MS.gene014614.t1 MTR_8g014050 77.961 608 123 3 85 685 88 691 0.0 986
MS.gene014614.t1 MTR_1g116210 74.590 610 144 4 82 684 70 675 0.0 977
MS.gene014614.t1 MTR_7g085540 74.958 595 140 2 95 684 117 707 0.0 967
MS.gene014614.t1 MTR_4g126010 39.927 273 153 5 125 394 9 273 1.49e-59 207
MS.gene014614.t1 MTR_2g099670 38.828 273 156 5 125 394 9 273 2.96e-58 204
MS.gene014614.t1 MTR_2g039930 38.828 273 156 5 125 394 9 273 1.77e-57 202
MS.gene014614.t1 MTR_1g042280 38.434 281 160 6 117 394 4 274 1.82e-56 199
MS.gene014614.t1 MTR_1g075870 38.710 279 158 6 119 394 6 274 2.16e-56 195
MS.gene014614.t1 MTR_8g018310 38.951 267 151 6 125 388 9 266 2.45e-56 199
MS.gene014614.t1 MTR_7g097160 38.828 273 156 5 125 394 9 273 2.47e-56 199
MS.gene014614.t1 MTR_8g018310 38.951 267 151 6 125 388 9 266 5.30e-56 196
MS.gene014614.t1 MTR_1g075870 38.710 279 158 6 119 394 6 274 1.98e-55 196
MS.gene014614.t1 MTR_1g069720 37.276 279 162 6 119 394 5 273 5.08e-54 192
MS.gene014614.t1 MTR_0492s0030 38.163 283 160 6 117 394 3 275 2.34e-53 188
MS.gene014614.t1 MTR_0543s0020 38.163 283 160 6 117 394 3 275 2.34e-53 188
MS.gene014614.t1 MTR_8g102930 37.993 279 160 6 119 394 5 273 4.62e-53 189
MS.gene014614.t1 MTR_1g004990 37.102 283 164 7 115 394 2 273 5.93e-53 188
MS.gene014614.t1 MTR_6g087070 36.630 273 162 5 125 394 9 273 1.35e-52 187
MS.gene014614.t1 MTR_3g110180 36.201 279 165 6 119 394 5 273 2.78e-52 187
MS.gene014614.t1 MTR_3g110180 36.201 279 164 7 119 394 5 272 1.01e-50 182
MS.gene014614.t1 MTR_1g042280 39.823 226 130 3 172 394 20 242 7.23e-50 176
MS.gene014614.t1 MTR_2g099670 40.376 213 121 3 185 394 12 221 8.63e-48 174
MS.gene014614.t1 MTR_1g075870 39.908 218 125 3 180 394 3 217 5.22e-47 168
MS.gene014614.t1 MTR_2g039930 41.026 195 109 3 203 394 1 192 6.57e-42 157
MS.gene014614.t1 MTR_1g116205 65.049 103 29 3 82 177 70 172 1.47e-33 127
MS.gene014614.t1 MTR_7g097160 43.511 131 70 2 267 394 25 154 1.38e-27 114
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene014614.t1 AT2G25760 76.046 693 138 7 1 685 1 673 0.0 1098
MS.gene014614.t1 AT2G25760 75.431 696 140 8 1 685 1 676 0.0 1088
MS.gene014614.t1 AT3G13670 70.360 695 183 6 1 685 22 703 0.0 1020
MS.gene014614.t1 AT3G03940 73.770 610 149 3 82 684 95 700 0.0 969
MS.gene014614.t1 AT5G18190 73.927 606 147 3 86 684 89 690 0.0 966
MS.gene014614.t1 AT5G18190 73.927 606 147 3 86 684 89 690 0.0 966
MS.gene014614.t1 AT3G03930 69.388 245 74 1 441 684 43 287 2.36e-121 363
MS.gene014614.t1 AT4G26100 39.194 273 155 5 125 394 9 273 1.60e-58 204
MS.gene014614.t1 AT2G19470 39.560 273 154 5 125 394 9 273 6.83e-58 202
MS.gene014614.t1 AT3G23340 39.427 279 156 6 119 394 5 273 6.84e-58 202
MS.gene014614.t1 AT1G03930 38.790 281 159 6 117 394 3 273 8.67e-58 203
MS.gene014614.t1 AT1G72710 39.194 273 154 6 125 394 9 272 9.13e-57 200
MS.gene014614.t1 AT5G44100 37.367 281 163 6 117 394 3 273 1.24e-56 200
MS.gene014614.t1 AT5G44100 37.367 281 163 6 117 394 3 273 1.24e-56 200
MS.gene014614.t1 AT5G57015 38.462 273 157 5 125 394 9 273 1.26e-56 199
MS.gene014614.t1 AT4G14340 39.068 279 157 6 119 394 11 279 1.67e-56 196
MS.gene014614.t1 AT4G14340 39.068 279 157 6 119 394 11 279 3.00e-56 198
MS.gene014614.t1 AT4G28540 37.993 279 160 6 119 394 9 277 1.38e-55 197
MS.gene014614.t1 AT5G43320 39.068 279 157 6 119 394 5 273 1.72e-55 197
MS.gene014614.t1 AT5G43320 39.068 279 157 6 119 394 5 273 1.09e-54 192
MS.gene014614.t1 AT5G43320 39.068 279 157 6 119 394 5 273 1.09e-54 192
MS.gene014614.t1 AT4G28860 37.993 279 160 6 119 394 5 273 1.84e-54 191
MS.gene014614.t1 AT1G04440 37.993 279 160 6 119 394 5 273 1.99e-54 194
MS.gene014614.t1 AT4G28860 37.993 279 160 6 119 394 5 273 5.81e-54 191
MS.gene014614.t1 AT4G28880 38.351 279 159 6 119 394 5 273 8.75e-54 191
MS.gene014614.t1 AT4G28880 38.351 279 159 6 119 394 5 273 8.75e-54 191
MS.gene014614.t1 AT4G28880 38.351 279 159 6 119 394 5 273 8.75e-54 191
MS.gene014614.t1 AT4G28880 38.351 279 159 6 119 394 5 273 8.75e-54 191
MS.gene014614.t1 AT3G23340 38.697 261 149 5 137 394 7 259 6.93e-51 183
MS.gene014614.t1 AT4G08800 34.066 273 137 6 125 394 9 241 1.95e-42 155

Find 192 sgRNAs with CRISPR-Local

Find 382 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACCTACAATTCCATCAAAA+AGG 0.194189 3.1:-88292359 None:intergenic
TCTGAGCACCCTCGGTATTT+AGG 0.209029 3.1:-88292401 None:intergenic
CCCATTCGGACCTTCTTCTT+TGG 0.219272 3.1:-88292581 None:intergenic
CTGAGCACCCTCGGTATTTA+GGG 0.247642 3.1:-88292400 None:intergenic
CTTTCCCAACACATTGTAAA+AGG 0.251961 3.1:+88292767 MS.gene014614:CDS
TGGCTTCTTGTGCTAGTCTT+TGG 0.253271 3.1:+88292819 MS.gene014614:CDS
AAGCTTGGGAAGGGAGGATT+TGG 0.257494 3.1:+88289731 MS.gene014614:CDS
TGTTTCACAGGAATGGATTA+TGG 0.259630 3.1:+88293035 MS.gene014614:intron
ATCAACGCCCAGATGTATTT+AGG 0.259852 3.1:+88291860 MS.gene014614:CDS
CTTCTGCCTCCGATTCCTTC+TGG 0.270294 3.1:-88289236 None:intergenic
AAACGAGTCACTGACTTTAT+AGG 0.282911 3.1:-88293292 None:intergenic
GGCTTCTTGTGCTAGTCTTT+GGG 0.284395 3.1:+88292820 MS.gene014614:CDS
ATATGCTTGGCTCTAGTCTA+TGG 0.295213 3.1:+88290414 MS.gene014614:CDS
TGGCCACTGCTGGCACTAGA+TGG 0.300589 3.1:+88293367 MS.gene014614:CDS
TATAGGATTGTTGCATGTAT+TGG 0.306085 3.1:-88293275 None:intergenic
GCTCAAAACCTTTGTTTCAT+TGG 0.309003 3.1:-88292647 None:intergenic
TAAGAAGAAGGCAGTGGTTA+GGG 0.314293 3.1:+88289357 MS.gene014614:CDS
AGGGGCCTAATGTCAGGATT+TGG 0.316161 3.1:-88292381 None:intergenic
GCTCTAGTCTATGGGATGTT+TGG 0.316967 3.1:+88290423 MS.gene014614:CDS
TTCGGCTCCCGGAGCTTTAT+CGG 0.329884 3.1:-88289428 None:intergenic
ATAGGATTGTTGCATGTATT+GGG 0.335579 3.1:-88293274 None:intergenic
TTTCTGGTTGATCTTGGATT+AGG 0.337171 3.1:+88291715 MS.gene014614:CDS
ACCAACCTTGTGAAGAAAAC+TGG 0.342759 3.1:-88292897 None:intergenic
TAGTCTTTGGGCACTCATTA+TGG 0.347322 3.1:+88292832 MS.gene014614:CDS
GTGAATAACGACGACGAAAC+AGG 0.354236 3.1:+88289301 MS.gene014614:CDS
ACACTAATCCACTGTGTTGC+TGG 0.363197 3.1:-88292608 None:intergenic
GTTACCTTGGCAAGGATATC+AGG 0.363733 3.1:+88292078 MS.gene014614:CDS
TTCCTATCTAATCTATATAA+TGG 0.369860 3.1:-88289710 None:intergenic
CTCCCTTCTTCTTCGGCTCC+CGG 0.370094 3.1:-88289439 None:intergenic
AGAACAAACCTAAATACATC+TGG 0.381852 3.1:-88291868 None:intergenic
TTGTTACAGGGAGAAAATAA+AGG 0.383335 3.1:+88292198 MS.gene014614:intron
GCAAGGTGACTACTACATTA+TGG 0.384482 3.1:+88290303 MS.gene014614:CDS
CTCATTATGGATGCTGGCAC+TGG 0.386456 3.1:+88292845 MS.gene014614:CDS
AACAGCAAAGGGTGCAATTA+CGG 0.391275 3.1:+88290106 MS.gene014614:CDS
TATAGATTAGATAGGAAGCT+TGG 0.395411 3.1:+88289716 MS.gene014614:CDS
TATATCGCATCTATTAGTTA+TGG 0.395955 3.1:+88293812 MS.gene014614:CDS
ATAAGAAGAAGGCAGTGGTT+AGG 0.397165 3.1:+88289356 MS.gene014614:CDS
AACTTCTTGCTTGGACCCTC+GGG 0.405644 3.1:+88291670 MS.gene014614:CDS
CGCCGCCGGTCGCCGGCGGG+AGG 0.407045 3.1:+88289185 MS.gene014614:CDS
ACGCGCCGCCGGTCGCCGGC+GGG 0.411110 3.1:+88289182 MS.gene014614:CDS
GTGACTCGTTTCCATTTAAG+TGG 0.412212 3.1:+88293304 MS.gene014614:CDS
AGTTGTACTCCCTTCTTCTT+CGG 0.412608 3.1:-88289446 None:intergenic
AAGTTGTTTCTGGTTGATCT+TGG 0.425523 3.1:+88291709 MS.gene014614:CDS
CTCCATTATATAGATTAGAT+AGG 0.426261 3.1:+88289708 MS.gene014614:CDS
ATATCGCATCTATTAGTTAT+GGG 0.426501 3.1:+88293813 MS.gene014614:CDS
GGAATCAAAATCACCTTCTC+AGG 0.426563 3.1:-88289475 None:intergenic
ATTGTTATGTCCCGTGGTGC+TGG 0.431009 3.1:+88293393 MS.gene014614:CDS
CGACGCGTAGGAGCTGGTTC+TGG 0.431637 3.1:+88289770 MS.gene014614:CDS
AAACTTCTTGCTTGGACCCT+CGG 0.431706 3.1:+88291669 MS.gene014614:CDS
GATAGGAAGCTTGGGAAGGG+AGG 0.432226 3.1:+88289725 MS.gene014614:CDS
TTCTTCGTGGTCGGTTACCT+TGG 0.433456 3.1:+88292065 MS.gene014614:CDS
CAAAAGCAACACAAAGCTTC+GGG 0.436504 3.1:-88292255 None:intergenic
AACGCGCCGCCGGTCGCCGG+CGG 0.437647 3.1:+88289181 MS.gene014614:CDS
CCTTCTGGTCTGTGCGGCGG+TGG 0.439587 3.1:-88289221 None:intergenic
GTCACTGCTATGGCCACTGC+TGG 0.440107 3.1:+88293357 MS.gene014614:CDS
AGCGTTTCTTGAGTTTCATC+AGG 0.442256 3.1:-88293653 None:intergenic
ACGCTTGTCTTCCTTCTTCG+TGG 0.445559 3.1:+88292052 MS.gene014614:CDS
TAGGTCCAAATCCTGACATT+AGG 0.445820 3.1:+88292376 MS.gene014614:CDS
TGTTGTGAAGCTTATATGTC+AGG 0.445999 3.1:+88292508 MS.gene014614:intron
ACAAAAGCAACACAAAGCTT+CGG 0.446009 3.1:-88292256 None:intergenic
AAAATAAAAGCAGCTTGATC+AGG 0.446910 3.1:-88293608 None:intergenic
AAGCCTGAAAACTTCTTGCT+TGG 0.452042 3.1:+88291661 MS.gene014614:CDS
GTATTTAGGGGCCTAATGTC+AGG 0.452090 3.1:-88292387 None:intergenic
CGTTGGCGTGATAGTTCAAC+TGG 0.453748 3.1:+88291820 MS.gene014614:CDS
CTGTGCGGCGGTGGCAGCGA+CGG 0.454161 3.1:-88289212 None:intergenic
TTTACCTTAACATGAGTACT+AGG 0.455799 3.1:-88293692 None:intergenic
TATTACATCAGTGCCATAGC+TGG 0.456706 3.1:+88293075 MS.gene014614:CDS
GTTGGCCGACGCGTAGGAGC+TGG 0.466210 3.1:+88289764 MS.gene014614:CDS
AAAATCACCTTCTCAGGAAG+TGG 0.470398 3.1:-88289469 None:intergenic
CTCCTCCCGCCGGCGACCGG+CGG 0.471128 3.1:-88289187 None:intergenic
GCTCTCCTCCCGCCGGCGAC+CGG 0.471790 3.1:-88289190 None:intergenic
TGGGCACTCATTATGGATGC+TGG 0.472875 3.1:+88292839 MS.gene014614:CDS
AGCTAGTAACGGGTCCTCAT+TGG 0.474983 3.1:+88293098 MS.gene014614:CDS
ATCTAGGATGTCTACTGAAA+TGG 0.475531 3.1:+88290557 MS.gene014614:intron
CGAGGTCGGGTACGCAACTC+AGG 0.476552 3.1:-88289139 None:intergenic
GATAACGCGCCGCCGGTCGC+CGG 0.478774 3.1:+88289178 MS.gene014614:CDS
TCATTGGTTGTAATGTCAAA+AGG 0.480800 3.1:+88293114 MS.gene014614:CDS
AGCTTGGGAAGGGAGGATTT+GGG 0.483807 3.1:+88289732 MS.gene014614:CDS
CTACATATTCTACAAACTGC+CGG 0.484853 3.1:-88292290 None:intergenic
AACTAATAGATGCGATATAG+AGG 0.485124 3.1:-88293808 None:intergenic
ATTGTAAAAGGAAATGAAGA+TGG 0.488040 3.1:+88292779 MS.gene014614:CDS
GGAAGACAAGCGTGTAAGCA+AGG 0.490386 3.1:-88292042 None:intergenic
ATAGATTAGATAGGAAGCTT+GGG 0.491550 3.1:+88289717 MS.gene014614:CDS
CCGCACAGACCAGAAGGAAT+CGG 0.493586 3.1:+88289227 MS.gene014614:CDS
CTCTGTAAATCCAGCACCAC+GGG 0.494784 3.1:-88293403 None:intergenic
TTCATCATCATCCTCTTCCA+TGG 0.494964 3.1:-88292555 None:intergenic
GTGTTGCTGGCTGACCCATT+CGG 0.496471 3.1:-88292595 None:intergenic
TTAGATAGGAAGCTTGGGAA+GGG 0.503149 3.1:+88289722 MS.gene014614:CDS
CGTAGTGCCGATAAAGCTCC+GGG 0.503731 3.1:+88289421 MS.gene014614:CDS
GCTCCGGGAGCCGAAGAAGA+AGG 0.504739 3.1:+88289436 MS.gene014614:CDS
CCGTAGTGCCGATAAAGCTC+CGG 0.505206 3.1:+88289420 MS.gene014614:CDS
GGAAGGAGAGAATAAGAAGA+AGG 0.510183 3.1:+88289345 MS.gene014614:CDS
CCATAGCTGGAGCTAGTAAC+GGG 0.513636 3.1:+88293088 MS.gene014614:CDS
ATTAGATAGGAAGCTTGGGA+AGG 0.514540 3.1:+88289721 MS.gene014614:CDS
TGATTACAGATTCAAGTTGG+TGG 0.517426 3.1:+88289683 MS.gene014614:intron
TTGTCTTCCTTCTTCGTGGT+CGG 0.524778 3.1:+88292056 MS.gene014614:CDS
GCTATGGATGAGTACGATAG+TGG 0.525051 3.1:+88289394 MS.gene014614:CDS
CTTCGATGAATACCTTCACT+AGG 0.528484 3.1:-88293545 None:intergenic
TTCTCATCAGGGGTTCCCGA+GGG 0.529311 3.1:-88291685 None:intergenic
GGATTTGGGCAAGTCTATGT+TGG 0.531558 3.1:+88289746 MS.gene014614:CDS
GAATACCTTCACTAGGGTAC+AGG 0.532543 3.1:-88293538 None:intergenic
CCAAAGAAGAAGGTCCGAAT+GGG 0.533192 3.1:+88292581 MS.gene014614:CDS
AGGACGATTGACCATGGAAG+AGG 0.534909 3.1:+88292544 MS.gene014614:CDS
ATTACGGACCTCCACATGAA+TGG 0.537264 3.1:+88290122 MS.gene014614:CDS
ACAAACTGCCGGAAAGGTGC+AGG 0.538874 3.1:-88292279 None:intergenic
TCTTGATTACAGATTCAAGT+TGG 0.538896 3.1:+88289680 MS.gene014614:intron
TATGCTTGGCTCTAGTCTAT+GGG 0.539645 3.1:+88290415 MS.gene014614:CDS
AGCTGGTTCTGGTGCCGTTG+AGG 0.543472 3.1:+88289781 MS.gene014614:CDS
GGTTTCTAGAGAGGAAGCTA+TGG 0.545782 3.1:+88289378 MS.gene014614:CDS
GAGACGGTTTATGCGAGGTC+GGG 0.546267 3.1:-88289152 None:intergenic
CGGACCTCCACATGAATGGC+AGG 0.546511 3.1:+88290126 MS.gene014614:CDS
TGGTGCTGGATTTACAGAGC+AGG 0.546908 3.1:+88293407 MS.gene014614:CDS
GAGAGATTGAAAGAAGAGGA+AGG 0.548043 3.1:+88289328 MS.gene014614:CDS
GGCCACTGCTGGCACTAGAT+GGG 0.549197 3.1:+88293368 MS.gene014614:CDS
AGAGAATAAGAAGAAGGCAG+TGG 0.549582 3.1:+88289351 MS.gene014614:CDS
AAGGTAACCGACCACGAAGA+AGG 0.552994 3.1:-88292063 None:intergenic
GTGAAGGTATTCATCGAAGG+TGG 0.556433 3.1:+88293549 MS.gene014614:CDS
TTTCTCATCAGGGGTTCCCG+AGG 0.557461 3.1:-88291686 None:intergenic
CTCCGGGAGCCGAAGAAGAA+GGG 0.558776 3.1:+88289437 MS.gene014614:CDS
TGAGCACCCTCGGTATTTAG+GGG 0.558929 3.1:-88292399 None:intergenic
TGATGAACAACCAAAGAAGA+AGG 0.560213 3.1:+88292571 MS.gene014614:CDS
AGTGGTTAGGGTTTCTAGAG+AGG 0.560234 3.1:+88289369 MS.gene014614:CDS
AGGAATGGATTATGGAACAG+TGG 0.562856 3.1:+88293043 MS.gene014614:intron
CGTGGTCGGTTACCTTGGCA+AGG 0.564377 3.1:+88292070 MS.gene014614:CDS
AAATACCGAGGGTGCTCAGA+AGG 0.565005 3.1:+88292404 MS.gene014614:CDS
CACGAGTACATTACAAGGGA+CGG 0.566096 3.1:+88290281 MS.gene014614:CDS
AGTAGAGAGATTGAAAGAAG+AGG 0.566314 3.1:+88289324 MS.gene014614:CDS
GCTAGTGTGCATGCACATCT+TGG 0.567152 3.1:+88291986 MS.gene014614:CDS
AAGTAGCAGGAGAGATGACT+TGG 0.570146 3.1:+88292015 MS.gene014614:CDS
TAGAGAAGATGCATTGTAGA+GGG 0.572443 3.1:+88290613 MS.gene014614:CDS
CCACCGCCGCACAGACCAGA+AGG 0.573426 3.1:+88289221 MS.gene014614:CDS
ACCAAAGAAGAAGGTCCGAA+TGG 0.576715 3.1:+88292580 MS.gene014614:CDS
TATTCTACAAACTGCCGGAA+AGG 0.578047 3.1:-88292285 None:intergenic
GTTTCTTGAGTTTCATCAGG+TGG 0.578812 3.1:-88293650 None:intergenic
ACACAAAGCTTCGGGTGAAG+TGG 0.580070 3.1:-88292247 None:intergenic
ACACAGGTCATGGATATGCT+TGG 0.581027 3.1:+88290401 MS.gene014614:intron
GCCATAGCTGGAGCTAGTAA+CGG 0.586802 3.1:+88293087 MS.gene014614:CDS
GAACAAACCTAAATACATCT+GGG 0.586854 3.1:-88291867 None:intergenic
TGTTCCACGAGTACATTACA+AGG 0.586861 3.1:+88290276 MS.gene014614:CDS
GGAATGGATTATGGAACAGT+GGG 0.588580 3.1:+88293044 MS.gene014614:intron
GTCTATGTTGGCCGACGCGT+AGG 0.589738 3.1:+88289758 MS.gene014614:CDS
TACAACTCCACTTCCTGAGA+AGG 0.591492 3.1:+88289462 MS.gene014614:CDS
GTGTTGGGAAAGCCGCTCAT+CGG 0.591532 3.1:-88292756 None:intergenic
ATCTTGGTAGAACAAGTAGC+AGG 0.592624 3.1:+88292002 MS.gene014614:CDS
TTAGAGAAGATGCATTGTAG+AGG 0.593386 3.1:+88290612 MS.gene014614:CDS
TGAGACGGTTTATGCGAGGT+CGG 0.596794 3.1:-88289153 None:intergenic
AGCACATTAGGTGGTAGTCA+TGG 0.600563 3.1:+88290253 MS.gene014614:intron
TCTCACTGATAACGCGCCGC+CGG 0.600651 3.1:+88289171 MS.gene014614:CDS
AGCGACGGCTCTCCTCCCGC+CGG 0.600658 3.1:-88289197 None:intergenic
ATAACCTGATATCCTTGCCA+AGG 0.602758 3.1:-88292082 None:intergenic
GTTGATCATAATCAACATGA+AGG 0.605161 3.1:-88291843 None:intergenic
GATTTCCTGTACCCTAGTGA+AGG 0.606757 3.1:+88293533 MS.gene014614:CDS
CACAGACCAGAAGGAATCGG+AGG 0.609955 3.1:+88289230 MS.gene014614:CDS
TGAAGGTATTCATCGAAGGT+GGG 0.610628 3.1:+88293550 MS.gene014614:CDS
CTCGTAGACCAATGAAACAA+AGG 0.611155 3.1:+88292639 MS.gene014614:CDS
TTGTAAACCTGCCATTCATG+TGG 0.611605 3.1:-88290133 None:intergenic
TAGGATGTCTACTGAAATGG+TGG 0.612266 3.1:+88290560 MS.gene014614:intron
TTGAGCATAGAAACAGCAAA+GGG 0.612579 3.1:+88290095 MS.gene014614:CDS
CCCGTTACTAGCTCCAGCTA+TGG 0.614186 3.1:-88293088 None:intergenic
TTTGAGCATAGAAACAGCAA+AGG 0.615974 3.1:+88290094 MS.gene014614:CDS
AAGTACCTTCTGAGCACCCT+CGG 0.619914 3.1:-88292409 None:intergenic
AAAGAGAGGACGATTGACCA+TGG 0.622958 3.1:+88292538 MS.gene014614:CDS
ATTCCTTCTGGTCTGTGCGG+CGG 0.623393 3.1:-88289224 None:intergenic
TTCGATGAATACCTTCACTA+GGG 0.624580 3.1:-88293544 None:intergenic
CGTCCCTTGTAATGTACTCG+TGG 0.624983 3.1:-88290280 None:intergenic
GGTGGCATGTATTGCAATCG+AGG 0.627258 3.1:+88290578 MS.gene014614:CDS
CCGGAGCTTTATCGGCACTA+CGG 0.627559 3.1:-88289420 None:intergenic
TAAACCTGCCATTCATGTGG+AGG 0.628206 3.1:-88290130 None:intergenic
GTACATTACAAGGGACGGCA+AGG 0.629460 3.1:+88290286 MS.gene014614:CDS
GTGAAGCTTATATGTCAGGT+TGG 0.629643 3.1:+88292512 MS.gene014614:intron
ATTACAATGTGGCCGATGAG+CGG 0.631315 3.1:+88292744 MS.gene014614:CDS
TGCCCATCTAGTGCCAGCAG+TGG 0.632198 3.1:-88293370 None:intergenic
GCGGCGCGTTATCAGTGAGA+CGG 0.633560 3.1:-88289168 None:intergenic
TGTTGTTGCAGATATGTGCA+TGG 0.634497 3.1:+88291631 MS.gene014614:intron
GAAGACAAGCGTGTAAGCAA+GGG 0.638778 3.1:-88292041 None:intergenic
TTGCAGCAGTTGCAGTAATG+CGG 0.640610 3.1:-88293583 None:intergenic
CTAGTGAAGGTATTCATCGA+AGG 0.644295 3.1:+88293546 MS.gene014614:CDS
TGGGCAATTGTTATGTCCCG+TGG 0.648130 3.1:+88293387 MS.gene014614:CDS
TACTAGGAAAATCAGACGTG+CGG 0.651938 3.1:-88293676 None:intergenic
TGGTTTATTTATTAGCAGTG+TGG 0.653080 3.1:+88292799 MS.gene014614:CDS
AAACACCGTACATACCTCAA+CGG 0.667251 3.1:-88289795 None:intergenic
TGTCAGGTTGGACAAAAGAG+AGG 0.668670 3.1:+88292524 MS.gene014614:CDS
ATGGATGAGTACGATAGTGG+TGG 0.670453 3.1:+88289397 MS.gene014614:CDS
CAGAACCAGCTCCTACGCGT+CGG 0.671406 3.1:-88289769 None:intergenic
GCTCTGTAAATCCAGCACCA+CGG 0.673158 3.1:-88293404 None:intergenic
CATTAGGCCCCTAAATACCG+AGG 0.680909 3.1:+88292392 MS.gene014614:CDS
TCAGTGAGACGGTTTATGCG+AGG 0.681265 3.1:-88289157 None:intergenic
ATTAGGCCCCTAAATACCGA+GGG 0.697940 3.1:+88292393 MS.gene014614:CDS
TGGGTCAGCCAGCAACACAG+TGG 0.714696 3.1:+88292600 MS.gene014614:CDS
GCGTAGGTATCATTACAATG+TGG 0.721199 3.1:+88292733 MS.gene014614:intron
GTTCCACGAGTACATTACAA+GGG 0.736863 3.1:+88290277 MS.gene014614:CDS
CCGATTCCTTCTGGTCTGTG+CGG 0.742167 3.1:-88289227 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAACTTTATAAAATGTA+AGG + chr3.1:88289920-88289939 MS.gene014614:intron 10.0%
!! AAAAACTTTATAAAATGTAA+GGG + chr3.1:88289921-88289940 MS.gene014614:intron 10.0%
!! ATAATAAATATAATATAACC+AGG - chr3.1:88290652-88290671 None:intergenic 10.0%
!! TTATTTATGCAAAAATAAAT+CGG + chr3.1:88290862-88290881 MS.gene014614:intron 10.0%
!!! AAGTTTTTTAATAAAGTAAT+GGG + chr3.1:88290337-88290356 MS.gene014614:intron 10.0%
!!! TAAGTTTTTTAATAAAGTAA+TGG + chr3.1:88290336-88290355 MS.gene014614:intron 10.0%
!!! TGAATTTTTTAATTTTGTAA+GGG + chr3.1:88289870-88289889 MS.gene014614:intron 10.0%
!! ATCTATTATATTACTAACAT+TGG - chr3.1:88291525-88291544 None:intergenic 15.0%
!! TATTTAAATCAATGTATGTA+TGG + chr3.1:88291912-88291931 MS.gene014614:intron 15.0%
!!! AGTTTTTTAATAAAGTAATG+GGG + chr3.1:88290338-88290357 MS.gene014614:intron 15.0%
!!! CTGAATTTTTTAATTTTGTA+AGG + chr3.1:88289869-88289888 MS.gene014614:intron 15.0%
!!! TACATACATTGATTTAAATA+AGG - chr3.1:88291912-88291931 None:intergenic 15.0%
!!! TTGTTACATAATATTTTAGT+TGG + chr3.1:88289893-88289912 MS.gene014614:intron 15.0%
!! AAAATATAGAAAGTCAAAAC+TGG - chr3.1:88292712-88292731 None:intergenic 20.0%
!! AAATATAGAAAGTCAAAACT+GGG - chr3.1:88292711-88292730 None:intergenic 20.0%
!! AAGAACAAAAACAAATTTGA+GGG - chr3.1:88291432-88291451 None:intergenic 20.0%
!! ATTTAATTGAGATACAGTAA+TGG - chr3.1:88291229-88291248 None:intergenic 20.0%
!! TACATGTGTTATATCATTTA+AGG + chr3.1:88292447-88292466 MS.gene014614:intron 20.0%
!! TCTTGATGCATTATATATTT+AGG + chr3.1:88293149-88293168 MS.gene014614:intron 20.0%
!! TGATTAAATAACATTGTTGT+GGG + chr3.1:88289989-88290008 MS.gene014614:intron 20.0%
!! TTCCTATCTAATCTATATAA+TGG - chr3.1:88289713-88289732 None:intergenic 20.0%
!!! AGTTTTGACTTTCTATATTT+TGG + chr3.1:88292711-88292730 MS.gene014614:intron 20.0%
!!! CATATTTTTTGTAAATGTCT+TGG + chr3.1:88290499-88290518 MS.gene014614:intron 20.0%
!!! GATATGTATTTTGCATAATT+TGG - chr3.1:88292339-88292358 None:intergenic 20.0%
!!! GTTTTTTAATAAAGTAATGG+GGG + chr3.1:88290339-88290358 MS.gene014614:intron 20.0%
!!! TATTTGATATATTTTTCTGC+AGG + chr3.1:88293769-88293788 MS.gene014614:intron 20.0%
!!! TTATGAAATTGTTTGTTACA+GGG + chr3.1:88292186-88292205 MS.gene014614:intron 20.0%
!!! TTTTACTAAATTAAGTGTTG+TGG + chr3.1:88290955-88290974 MS.gene014614:intron 20.0%
! ACAATGAATACATGAAAATC+AGG - chr3.1:88293726-88293745 None:intergenic 25.0%
! ATATCGCATCTATTAGTTAT+GGG + chr3.1:88293813-88293832 MS.gene014614:CDS 25.0%
! ATCATTCTGTGATTATGATA+GGG + chr3.1:88291255-88291274 MS.gene014614:intron 25.0%
! ATTGTAAAAGGAAATGAAGA+TGG + chr3.1:88292779-88292798 MS.gene014614:CDS 25.0%
! CTCCATTATATAGATTAGAT+AGG + chr3.1:88289708-88289727 MS.gene014614:CDS 25.0%
! GAAGAACAAAAACAAATTTG+AGG - chr3.1:88291433-88291452 None:intergenic 25.0%
! GATGCATTATATATTTAGGA+TGG + chr3.1:88293153-88293172 MS.gene014614:intron 25.0%
! GATTCTGTATATCATATTCT+TGG + chr3.1:88291944-88291963 MS.gene014614:intron 25.0%
! GTGATTAAATAACATTGTTG+TGG + chr3.1:88289988-88290007 MS.gene014614:intron 25.0%
! TATATCGCATCTATTAGTTA+TGG + chr3.1:88293812-88293831 MS.gene014614:CDS 25.0%
! TATCATTCTGTGATTATGAT+AGG + chr3.1:88291254-88291273 MS.gene014614:intron 25.0%
! TATGCAAAAATAAATCGGTT+GGG + chr3.1:88290867-88290886 MS.gene014614:intron 25.0%
! TTAAGTGGATCAACAAAAAA+TGG + chr3.1:88293319-88293338 MS.gene014614:CDS 25.0%
! TTATGCAAAAATAAATCGGT+TGG + chr3.1:88290866-88290885 MS.gene014614:intron 25.0%
! TTTACTAACAGATTGTCTAT+GGG + chr3.1:88290688-88290707 MS.gene014614:intron 25.0%
!! AAATACATATCCCTTTTTGA+TGG + chr3.1:88292348-88292367 MS.gene014614:CDS 25.0%
!! ATATTTTTCTGCAGGAAAAA+TGG + chr3.1:88293777-88293796 MS.gene014614:intron 25.0%
!! ATTTCCTTTTACAATGTGTT+GGG - chr3.1:88292774-88292793 None:intergenic 25.0%
!! CTTATGAAATTGTTTGTTAC+AGG + chr3.1:88292185-88292204 MS.gene014614:intron 25.0%
!! GATAATTTTTGTCATGTGTT+AGG + chr3.1:88289635-88289654 MS.gene014614:intron 25.0%
!! TATTTTTCTGCAGGAAAAAT+GGG + chr3.1:88293778-88293797 MS.gene014614:intron 25.0%
!! TTTTTGTTGATCCACTTAAA+TGG - chr3.1:88293318-88293337 None:intergenic 25.0%
AAAAAATTCAGACACCCAAA+TGG - chr3.1:88289860-88289879 None:intergenic 30.0%
AAAATAAAAGCAGCTTGATC+AGG - chr3.1:88293611-88293630 None:intergenic 30.0%
AAATAAATGTTGCTCAACCT+CGG - chr3.1:88290848-88290867 None:intergenic 30.0%
AAATCATGAATCTGTTTCAC+AGG + chr3.1:88293023-88293042 MS.gene014614:intron 30.0%
AACACCCAAATGATAACATA+AGG - chr3.1:88290736-88290755 None:intergenic 30.0%
AACTAATAGATGCGATATAG+AGG - chr3.1:88293811-88293830 None:intergenic 30.0%
ACCTACAATTCCATCAAAAA+GGG - chr3.1:88292361-88292380 None:intergenic 30.0%
ACTCTATTGAAACAGAAAAG+AGG - chr3.1:88290169-88290188 None:intergenic 30.0%
AGAACAAACCTAAATACATC+TGG - chr3.1:88291871-88291890 None:intergenic 30.0%
AGATTTAAACACAACACTAC+TGG - chr3.1:88293214-88293233 None:intergenic 30.0%
ATAGATTAGATAGGAAGCTT+GGG + chr3.1:88289717-88289736 MS.gene014614:CDS 30.0%
ATAGGATTGTTGCATGTATT+GGG - chr3.1:88293277-88293296 None:intergenic 30.0%
ATTTACTAATTGACCATTGC+AGG - chr3.1:88291461-88291480 None:intergenic 30.0%
CTAGATCCAAAAAAGAACTA+AGG - chr3.1:88290543-88290562 None:intergenic 30.0%
CTCTATTGAAACAGAAAAGA+GGG - chr3.1:88290168-88290187 None:intergenic 30.0%
CTTTACTAACAGATTGTCTA+TGG + chr3.1:88290687-88290706 MS.gene014614:intron 30.0%
GAACAAACCTAAATACATCT+GGG - chr3.1:88291870-88291889 None:intergenic 30.0%
GGAAAAAATTTGTACACCAA+AGG + chr3.1:88290010-88290029 MS.gene014614:intron 30.0%
GTTGATCATAATCAACATGA+AGG - chr3.1:88291846-88291865 None:intergenic 30.0%
TATAGATTAGATAGGAAGCT+TGG + chr3.1:88289716-88289735 MS.gene014614:CDS 30.0%
TATAGGATTGTTGCATGTAT+TGG - chr3.1:88293278-88293297 None:intergenic 30.0%
TCTTGATTACAGATTCAAGT+TGG + chr3.1:88289680-88289699 MS.gene014614:intron 30.0%
TGGTTTATTTATTAGCAGTG+TGG + chr3.1:88292799-88292818 MS.gene014614:CDS 30.0%
TGTAACATAATGTTACACAC+AGG + chr3.1:88290385-88290404 MS.gene014614:intron 30.0%
TGTATATCATATTCTTGGCA+GGG + chr3.1:88291949-88291968 MS.gene014614:intron 30.0%
TTAATGCTACCTGCAATTAT+TGG - chr3.1:88290072-88290091 None:intergenic 30.0%
TTACTAACAGATTGTCTATG+GGG + chr3.1:88290689-88290708 MS.gene014614:intron 30.0%
TTACTAACATTGGTATTGCA+TGG - chr3.1:88291515-88291534 None:intergenic 30.0%
TTGTTACAGGGAGAAAATAA+AGG + chr3.1:88292198-88292217 MS.gene014614:intron 30.0%
TTTACCTTAACATGAGTACT+AGG - chr3.1:88293695-88293714 None:intergenic 30.0%
! AAATTCTTCTGATTTAGCTC+TGG + chr3.1:88290905-88290924 MS.gene014614:intron 30.0%
! ACTTTTTATAGCACATTAGG+TGG + chr3.1:88290244-88290263 MS.gene014614:intron 30.0%
! AGGTTTCTTTTTATCCAGTA+GGG + chr3.1:88291008-88291027 MS.gene014614:intron 30.0%
! ATACTCTTAAAGCCCTTTTA+TGG + chr3.1:88292480-88292499 MS.gene014614:intron 30.0%
! CACAATGTTTTCGATTTTCT+CGG - chr3.1:88289284-88289303 None:intergenic 30.0%
! CATTTCCTTTTACAATGTGT+TGG - chr3.1:88292775-88292794 None:intergenic 30.0%
! TACTAAATTAAGTGTTGTGG+AGG + chr3.1:88290958-88290977 MS.gene014614:intron 30.0%
! TACTCTTAAAGCCCTTTTAT+GGG + chr3.1:88292481-88292500 MS.gene014614:intron 30.0%
! TCTTTTCTGTTTCAATAGAG+TGG + chr3.1:88290168-88290187 MS.gene014614:intron 30.0%
! TGATGAGAAAAAGTTGTTTC+TGG + chr3.1:88291699-88291718 MS.gene014614:CDS 30.0%
! TTTTCCTAGTACTCATGTTA+AGG + chr3.1:88293688-88293707 MS.gene014614:CDS 30.0%
! TTTTGACATTACAACCAATG+AGG - chr3.1:88293115-88293134 None:intergenic 30.0%
!! AAACAACTTTTTCTCATCAG+GGG - chr3.1:88291698-88291717 None:intergenic 30.0%
!! AGAAACAACTTTTTCTCATC+AGG - chr3.1:88291700-88291719 None:intergenic 30.0%
!! ATAAAAGGGCTTTAAGAGTA+TGG - chr3.1:88292481-88292500 None:intergenic 30.0%
!! ATTGACAATGAAAGCATCAA+AGG - chr3.1:88291761-88291780 None:intergenic 30.0%
!! GAAACAACTTTTTCTCATCA+GGG - chr3.1:88291699-88291718 None:intergenic 30.0%
!! TTGACAATGAAAGCATCAAA+GGG - chr3.1:88291760-88291779 None:intergenic 30.0%
!!! CTCACTTTTTATAGCACATT+AGG + chr3.1:88290241-88290260 MS.gene014614:intron 30.0%
!!! CTTAGTTCTTTTTTGGATCT+AGG + chr3.1:88290541-88290560 MS.gene014614:intron 30.0%
!!! GTCTAACCTTAGTTCTTTTT+TGG + chr3.1:88290534-88290553 MS.gene014614:intron 30.0%
!!! TAGTTTTTTTTTTTACCCCG+AGG + chr3.1:88290828-88290847 MS.gene014614:intron 30.0%
AAGTCCCAAATCAAGTAGTA+TGG + chr3.1:88291300-88291319 MS.gene014614:intron 35.0%
AATAAATGTTGCTCAACCTC+GGG - chr3.1:88290847-88290866 None:intergenic 35.0%
ACAAAAGCAACACAAAGCTT+CGG - chr3.1:88292259-88292278 None:intergenic 35.0%
AGTAGAGAGATTGAAAGAAG+AGG + chr3.1:88289324-88289343 MS.gene014614:CDS 35.0%
AGTGGATCAACAAAAAATGG+AGG + chr3.1:88293322-88293341 MS.gene014614:CDS 35.0%
ATAAAAGTCGTAGATGCCTT+TGG - chr3.1:88290029-88290048 None:intergenic 35.0%
ATAATGTTACACACAGGTCA+TGG + chr3.1:88290391-88290410 MS.gene014614:intron 35.0%
ATCAACAAAAAATGGAGGGA+AGG + chr3.1:88293327-88293346 MS.gene014614:CDS 35.0%
ATCCTAAAAGCTAGCTATCA+AGG - chr3.1:88291363-88291382 None:intergenic 35.0%
ATGAATCTGTTTCACAGGAA+TGG + chr3.1:88293028-88293047 MS.gene014614:intron 35.0%
CAAAAACAAATTTGAGGGCA+TGG - chr3.1:88291427-88291446 None:intergenic 35.0%
CACAACACAAACCCATAAAA+GGG - chr3.1:88292495-88292514 None:intergenic 35.0%
CTACATATTCTACAAACTGC+CGG - chr3.1:88292293-88292312 None:intergenic 35.0%
CTCGCCTTATGTTATCATTT+GGG + chr3.1:88290729-88290748 MS.gene014614:intron 35.0%
CTGTATATCATATTCTTGGC+AGG + chr3.1:88291948-88291967 MS.gene014614:intron 35.0%
CTTCACTATGAACATTTCTG+AGG - chr3.1:88289499-88289518 None:intergenic 35.0%
CTTTCCCAACACATTGTAAA+AGG + chr3.1:88292767-88292786 MS.gene014614:CDS 35.0%
GAACTAATGAGAAAACTGCA+GGG - chr3.1:88291090-88291109 None:intergenic 35.0%
GACCTACAATTCCATCAAAA+AGG - chr3.1:88292362-88292381 None:intergenic 35.0%
GATATTGCTCCAATAATTGC+AGG + chr3.1:88290060-88290079 MS.gene014614:intron 35.0%
GTATATCATATTCTTGGCAG+GGG + chr3.1:88291950-88291969 MS.gene014614:intron 35.0%
GTGGATCAACAAAAAATGGA+GGG + chr3.1:88293323-88293342 MS.gene014614:CDS 35.0%
TAGAGAAGATGCATTGTAGA+GGG + chr3.1:88290613-88290632 MS.gene014614:CDS 35.0%
TCACAACACAAACCCATAAA+AGG - chr3.1:88292496-88292515 None:intergenic 35.0%
TCTCGCCTTATGTTATCATT+TGG + chr3.1:88290728-88290747 MS.gene014614:intron 35.0%
TCTTGTCTGCAAGAAAAAGA+TGG + chr3.1:88292224-88292243 MS.gene014614:CDS 35.0%
TGAACTAATGAGAAAACTGC+AGG - chr3.1:88291091-88291110 None:intergenic 35.0%
TGATGAACAACCAAAGAAGA+AGG + chr3.1:88292571-88292590 MS.gene014614:CDS 35.0%
TGTGATTATGATAGGGACTT+GGG + chr3.1:88291262-88291281 MS.gene014614:intron 35.0%
TGTGCTATAAAAAGTGAGCA+TGG - chr3.1:88290239-88290258 None:intergenic 35.0%
TGTTGTGAAGCTTATATGTC+AGG + chr3.1:88292508-88292527 MS.gene014614:intron 35.0%
TTAGAGAAGATGCATTGTAG+AGG + chr3.1:88290612-88290631 MS.gene014614:CDS 35.0%
TTCCCCATGAGGTAAAAAAA+CGG - chr3.1:88290759-88290778 None:intergenic 35.0%
TTCGATGAATACCTTCACTA+GGG - chr3.1:88293547-88293566 None:intergenic 35.0%
TTGAGCATAGAAACAGCAAA+GGG + chr3.1:88290095-88290114 MS.gene014614:CDS 35.0%
TTTGAGCATAGAAACAGCAA+AGG + chr3.1:88290094-88290113 MS.gene014614:CDS 35.0%
! ATCTAGGATGTCTACTGAAA+TGG + chr3.1:88290557-88290576 MS.gene014614:intron 35.0%
! ATTGATACATGCTGCCATTT+GGG + chr3.1:88289843-88289862 MS.gene014614:intron 35.0%
! GAGGTTTCTTTTTATCCAGT+AGG + chr3.1:88291007-88291026 MS.gene014614:intron 35.0%
! GCTCAAAACCTTTGTTTCAT+TGG - chr3.1:88292650-88292669 None:intergenic 35.0%
! TCCCTTTTTGATGGAATTGT+AGG + chr3.1:88292357-88292376 MS.gene014614:CDS 35.0%
!! AAACGAGTCACTGACTTTAT+AGG - chr3.1:88293295-88293314 None:intergenic 35.0%
!! AAGTTGTTTCTGGTTGATCT+TGG + chr3.1:88291709-88291728 MS.gene014614:CDS 35.0%
!! TGATTACAGATTCAAGTTGG+TGG + chr3.1:88289683-88289702 MS.gene014614:intron 35.0%
!! TGTTTCACAGGAATGGATTA+TGG + chr3.1:88293035-88293054 MS.gene014614:intron 35.0%
!! TTTCTGGTTGATCTTGGATT+AGG + chr3.1:88291715-88291734 MS.gene014614:CDS 35.0%
!!! AGGATTTTTTGTCACTGCTA+TGG + chr3.1:88293347-88293366 MS.gene014614:CDS 35.0%
!!! GACTTTCTATATTTTGGCGT+AGG + chr3.1:88292717-88292736 MS.gene014614:intron 35.0%
!!! GGGTGAGTATTTTAGTAGAT+TGG + chr3.1:88291329-88291348 MS.gene014614:intron 35.0%
!!! GTTCCGTTTTTTTACCTCAT+GGG + chr3.1:88290753-88290772 MS.gene014614:intron 35.0%
!!! TGTTCCGTTTTTTTACCTCA+TGG + chr3.1:88290752-88290771 MS.gene014614:intron 35.0%
!!! TTCCGTTTTTTTACCTCATG+GGG + chr3.1:88290754-88290773 MS.gene014614:intron 35.0%
AAAATCACCTTCTCAGGAAG+TGG - chr3.1:88289472-88289491 None:intergenic 40.0%
AAACACCGTACATACCTCAA+CGG - chr3.1:88289798-88289817 None:intergenic 40.0%
AAGCCTGAAAACTTCTTGCT+TGG + chr3.1:88291661-88291680 MS.gene014614:CDS 40.0%
AATCAAGTAGTATGGCGTGT+TGG + chr3.1:88291308-88291327 MS.gene014614:intron 40.0%
ACACGCCATACTACTTGATT+TGG - chr3.1:88291308-88291327 None:intergenic 40.0%
ACCAACCTTGTGAAGAAAAC+TGG - chr3.1:88292900-88292919 None:intergenic 40.0%
AGAGAATAAGAAGAAGGCAG+TGG + chr3.1:88289351-88289370 MS.gene014614:CDS 40.0%
AGCGTTTCTTGAGTTTCATC+AGG - chr3.1:88293656-88293675 None:intergenic 40.0%
AGTTGTACTCCCTTCTTCTT+CGG - chr3.1:88289449-88289468 None:intergenic 40.0%
ATAAATGTTGCTCAACCTCG+GGG - chr3.1:88290846-88290865 None:intergenic 40.0%
ATAACCTGATATCCTTGCCA+AGG - chr3.1:88292085-88292104 None:intergenic 40.0%
ATAAGAAGAAGGCAGTGGTT+AGG + chr3.1:88289356-88289375 MS.gene014614:CDS 40.0%
ATATCTGCAACAACAACAGC+AGG - chr3.1:88291626-88291645 None:intergenic 40.0%
ATCAACGCCCAGATGTATTT+AGG + chr3.1:88291860-88291879 MS.gene014614:CDS 40.0%
ATCAAGTAGTATGGCGTGTT+GGG + chr3.1:88291309-88291328 MS.gene014614:intron 40.0%
ATCTTGGTAGAACAAGTAGC+AGG + chr3.1:88292002-88292021 MS.gene014614:CDS 40.0%
ATGGCAGCATGTATCAATCA+CGG - chr3.1:88289841-88289860 None:intergenic 40.0%
ATTAGATAGGAAGCTTGGGA+AGG + chr3.1:88289721-88289740 MS.gene014614:CDS 40.0%
CAAAAGCAACACAAAGCTTC+GGG - chr3.1:88292258-88292277 None:intergenic 40.0%
CACGCCATACTACTTGATTT+GGG - chr3.1:88291307-88291326 None:intergenic 40.0%
CATATCTATTCCCGTTGCTT+CGG - chr3.1:88289968-88289987 None:intergenic 40.0%
CTAAAAGCTAGCTATCAAGG+AGG - chr3.1:88291360-88291379 None:intergenic 40.0%
CTCGTAGACCAATGAAACAA+AGG + chr3.1:88292639-88292658 MS.gene014614:CDS 40.0%
CTGTGATTATGATAGGGACT+TGG + chr3.1:88291261-88291280 MS.gene014614:intron 40.0%
CTTCGATGAATACCTTCACT+AGG - chr3.1:88293548-88293567 None:intergenic 40.0%
GAGAGATTGAAAGAAGAGGA+AGG + chr3.1:88289328-88289347 MS.gene014614:CDS 40.0%
GATAGGGACTTGGGTATTAT+GGG + chr3.1:88291271-88291290 MS.gene014614:intron 40.0%
GATTGATACATGCTGCCATT+TGG + chr3.1:88289842-88289861 MS.gene014614:intron 40.0%
GCAAGGTGACTACTACATTA+TGG + chr3.1:88290303-88290322 MS.gene014614:CDS 40.0%
GCGTAGGTATCATTACAATG+TGG + chr3.1:88292733-88292752 MS.gene014614:intron 40.0%
GGAAGGAGAGAATAAGAAGA+AGG + chr3.1:88289345-88289364 MS.gene014614:CDS 40.0%
GGAATCAAAATCACCTTCTC+AGG - chr3.1:88289478-88289497 None:intergenic 40.0%
GTGAAGCTTATATGTCAGGT+TGG + chr3.1:88292512-88292531 MS.gene014614:intron 40.0%
GTGACTCGTTTCCATTTAAG+TGG + chr3.1:88293304-88293323 MS.gene014614:CDS 40.0%
GTTCCACGAGTACATTACAA+GGG + chr3.1:88290277-88290296 MS.gene014614:CDS 40.0%
GTTGCTTCGGCACAAAATAA+CGG - chr3.1:88289955-88289974 None:intergenic 40.0%
GTTTCTTGAGTTTCATCAGG+TGG - chr3.1:88293653-88293672 None:intergenic 40.0%
TAAGAAGAAGGCAGTGGTTA+GGG + chr3.1:88289357-88289376 MS.gene014614:CDS 40.0%
TACTAGGAAAATCAGACGTG+CGG - chr3.1:88293679-88293698 None:intergenic 40.0%
TAGGATGTCTACTGAAATGG+TGG + chr3.1:88290560-88290579 MS.gene014614:intron 40.0%
TAGGTCCAAATCCTGACATT+AGG + chr3.1:88292376-88292395 MS.gene014614:CDS 40.0%
TAGTCTTTGGGCACTCATTA+TGG + chr3.1:88292832-88292851 MS.gene014614:CDS 40.0%
TATTACATCAGTGCCATAGC+TGG + chr3.1:88293075-88293094 MS.gene014614:CDS 40.0%
TATTCTACAAACTGCCGGAA+AGG - chr3.1:88292288-88292307 None:intergenic 40.0%
TCTAGTTGAGTCAGACGTTA+TGG + chr3.1:88289587-88289606 MS.gene014614:intron 40.0%
TGATAGGGACTTGGGTATTA+TGG + chr3.1:88291270-88291289 MS.gene014614:intron 40.0%
TGTTCCACGAGTACATTACA+AGG + chr3.1:88290276-88290295 MS.gene014614:CDS 40.0%
TGTTGTTGCAGATATGTGCA+TGG + chr3.1:88291631-88291650 MS.gene014614:intron 40.0%
TTAGATAGGAAGCTTGGGAA+GGG + chr3.1:88289722-88289741 MS.gene014614:CDS 40.0%
TTCATCATCATCCTCTTCCA+TGG - chr3.1:88292558-88292577 None:intergenic 40.0%
TTCTCTCTAAACTCGATGCT+AGG + chr3.1:88293499-88293518 MS.gene014614:intron 40.0%
TTGTAAACCTGCCATTCATG+TGG - chr3.1:88290136-88290155 None:intergenic 40.0%
! AACAGCAAAGGGTGCAATTA+CGG + chr3.1:88290106-88290125 MS.gene014614:CDS 40.0%
! AATTAAGTGTTGTGGAGGAG+AGG + chr3.1:88290963-88290982 MS.gene014614:intron 40.0%
! ACTTTTCATGAGCACATCTC+AGG - chr3.1:88291178-88291197 None:intergenic 40.0%
! AGAGGTTTCTTGTTATCCAG+AGG + chr3.1:88290981-88291000 MS.gene014614:intron 40.0%
! AGGTTTCTTGTTATCCAGAG+GGG + chr3.1:88290983-88291002 MS.gene014614:intron 40.0%
! CATCAGGTGGTTTTCTTCTT+GGG - chr3.1:88293640-88293659 None:intergenic 40.0%
! CTCTTCCAGTTTTCTTCACA+AGG + chr3.1:88292892-88292911 MS.gene014614:CDS 40.0%
! GAGGTTTCTTGTTATCCAGA+GGG + chr3.1:88290982-88291001 MS.gene014614:intron 40.0%
! TCATCAGGTGGTTTTCTTCT+TGG - chr3.1:88293641-88293660 None:intergenic 40.0%
! TCCAGTTTTCTTCACAAGGT+TGG + chr3.1:88292896-88292915 MS.gene014614:intron 40.0%
! TCTTTTTATCCAGTAGGGTG+AGG + chr3.1:88291013-88291032 MS.gene014614:intron 40.0%
! TTTTCTACACAGCAACTCGT+TGG + chr3.1:88291803-88291822 MS.gene014614:intron 40.0%
!! AGGAATGGATTATGGAACAG+TGG + chr3.1:88293043-88293062 MS.gene014614:intron 40.0%
!! ATATGCTTGGCTCTAGTCTA+TGG + chr3.1:88290414-88290433 MS.gene014614:CDS 40.0%
!! CTAGTGAAGGTATTCATCGA+AGG + chr3.1:88293546-88293565 MS.gene014614:CDS 40.0%
!! GAAAGCATCAAAGGGTAACA+TGG - chr3.1:88291752-88291771 None:intergenic 40.0%
!! GGAATGGATTATGGAACAGT+GGG + chr3.1:88293044-88293063 MS.gene014614:intron 40.0%
!! GTTATTTTGTGCCGAAGCAA+CGG + chr3.1:88289954-88289973 MS.gene014614:intron 40.0%
!! TATGCTTGGCTCTAGTCTAT+GGG + chr3.1:88290415-88290434 MS.gene014614:CDS 40.0%
!! TGAAGGTATTCATCGAAGGT+GGG + chr3.1:88293550-88293569 MS.gene014614:CDS 40.0%
!! TTATTTTGTGCCGAAGCAAC+GGG + chr3.1:88289955-88289974 MS.gene014614:intron 40.0%
!!! CTCCTTGATAGCTAGCTTTT+AGG + chr3.1:88291358-88291377 MS.gene014614:intron 40.0%
AAAAAGAAACCTCACCCCTC+TGG - chr3.1:88291000-88291019 None:intergenic 45.0%
AAACTTCTTGCTTGGACCCT+CGG + chr3.1:88291669-88291688 MS.gene014614:CDS 45.0%
AAAGAGAGGACGATTGACCA+TGG + chr3.1:88292538-88292557 MS.gene014614:CDS 45.0%
AAGTAGCAGGAGAGATGACT+TGG + chr3.1:88292015-88292034 MS.gene014614:CDS 45.0%
ACACAGGTCATGGATATGCT+TGG + chr3.1:88290401-88290420 MS.gene014614:intron 45.0%
ACACTAATCCACTGTGTTGC+TGG - chr3.1:88292611-88292630 None:intergenic 45.0%
ACCAAAGAAGAAGGTCCGAA+TGG + chr3.1:88292580-88292599 MS.gene014614:CDS 45.0%
ACTAATTGACCATTGCAGGC+AGG - chr3.1:88291457-88291476 None:intergenic 45.0%
AGCACATTAGGTGGTAGTCA+TGG + chr3.1:88290253-88290272 MS.gene014614:intron 45.0%
ATTACAATGTGGCCGATGAG+CGG + chr3.1:88292744-88292763 MS.gene014614:CDS 45.0%
ATTACGGACCTCCACATGAA+TGG + chr3.1:88290122-88290141 MS.gene014614:CDS 45.0%
ATTAGGCCCCTAAATACCGA+GGG + chr3.1:88292393-88292412 MS.gene014614:CDS 45.0%
ATTGAACGTGTTTCCCCATG+AGG - chr3.1:88290770-88290789 None:intergenic 45.0%
CACGAGTACATTACAAGGGA+CGG + chr3.1:88290281-88290300 MS.gene014614:CDS 45.0%
CATTAGTTCAGACTGAGAGC+AGG + chr3.1:88291101-88291120 MS.gene014614:intron 45.0%
CCAAAGAAGAAGGTCCGAAT+GGG + chr3.1:88292581-88292600 MS.gene014614:CDS 45.0%
CGAAGCAACGGGAATAGATA+TGG + chr3.1:88289966-88289985 MS.gene014614:intron 45.0%
CTAAACTCGATGCTAGGTTG+TGG + chr3.1:88293505-88293524 MS.gene014614:intron 45.0%
CTAATTGACCATTGCAGGCA+GGG - chr3.1:88291456-88291475 None:intergenic 45.0%
GAAGACAAGCGTGTAAGCAA+GGG - chr3.1:88292044-88292063 None:intergenic 45.0%
GAATACCTTCACTAGGGTAC+AGG - chr3.1:88293541-88293560 None:intergenic 45.0%
GACAAGTATCTGAGCACTTG+AGG - chr3.1:88291387-88291406 None:intergenic 45.0%
GATAACATAAGGCGAGACTC+AGG - chr3.1:88290725-88290744 None:intergenic 45.0%
GATTTCCTGTACCCTAGTGA+AGG + chr3.1:88293533-88293552 MS.gene014614:CDS 45.0%
GCTATGGATGAGTACGATAG+TGG + chr3.1:88289394-88289413 MS.gene014614:CDS 45.0%
GCTCTAGTCTATGGGATGTT+TGG + chr3.1:88290423-88290442 MS.gene014614:CDS 45.0%
GGATTTGGGCAAGTCTATGT+TGG + chr3.1:88289746-88289765 MS.gene014614:CDS 45.0%
GGGGTTTCTATTGTCTCTGA+AGG + chr3.1:88290358-88290377 MS.gene014614:intron 45.0%
GGTGTTTATGTCTGCCATTG+TGG + chr3.1:88289811-88289830 MS.gene014614:intron 45.0%
GTATTTAGGGGCCTAATGTC+AGG - chr3.1:88292390-88292409 None:intergenic 45.0%
GTGAATAACGACGACGAAAC+AGG + chr3.1:88289301-88289320 MS.gene014614:CDS 45.0%
GTGATCTGCTGTTCCTTACA+GGG + chr3.1:88293250-88293269 MS.gene014614:intron 45.0%
GTTACCTTGGCAAGGATATC+AGG + chr3.1:88292078-88292097 MS.gene014614:CDS 45.0%
TAAACCTGCCATTCATGTGG+AGG - chr3.1:88290133-88290152 None:intergenic 45.0%
TAAGCTTGACACACTGATCC+TGG - chr3.1:88291054-88291073 None:intergenic 45.0%
TAATTGACCATTGCAGGCAG+GGG - chr3.1:88291455-88291474 None:intergenic 45.0%
TACAACTCCACTTCCTGAGA+AGG + chr3.1:88289462-88289481 MS.gene014614:CDS 45.0%
TGTGATCTGCTGTTCCTTAC+AGG + chr3.1:88293249-88293268 MS.gene014614:intron 45.0%
TTGCAGCAGTTGCAGTAATG+CGG - chr3.1:88293586-88293605 None:intergenic 45.0%
TTGTCTTCCTTCTTCGTGGT+CGG + chr3.1:88292056-88292075 MS.gene014614:CDS 45.0%
! AGTGGTTAGGGTTTCTAGAG+AGG + chr3.1:88289369-88289388 MS.gene014614:CDS 45.0%
! ATGGATGAGTACGATAGTGG+TGG + chr3.1:88289397-88289416 MS.gene014614:CDS 45.0%
! GGTCCAAGCAAGAAGTTTTC+AGG - chr3.1:88291667-88291686 None:intergenic 45.0%
! GGTTTCTAGAGAGGAAGCTA+TGG + chr3.1:88289378-88289397 MS.gene014614:CDS 45.0%
!! GGCTTCTTGTGCTAGTCTTT+GGG + chr3.1:88292820-88292839 MS.gene014614:CDS 45.0%
!! GTGAAGGTATTCATCGAAGG+TGG + chr3.1:88293549-88293568 MS.gene014614:CDS 45.0%
!! TGGCTTCTTGTGCTAGTCTT+TGG + chr3.1:88292819-88292838 MS.gene014614:CDS 45.0%
!! TGTCAGGTTGGACAAAAGAG+AGG + chr3.1:88292524-88292543 MS.gene014614:CDS 45.0%
!! TATATTTATTATTTATACAT+GGG + chr3.1:88290660-88290679 MS.gene014614:intron 5.0%
!! TTATATTTATTATTTATACA+TGG + chr3.1:88290659-88290678 MS.gene014614:intron 5.0%
AACTTCTTGCTTGGACCCTC+GGG + chr3.1:88291670-88291689 MS.gene014614:CDS 50.0%
AAGCTTGGGAAGGGAGGATT+TGG + chr3.1:88289731-88289750 MS.gene014614:CDS 50.0%
AAGGTAACCGACCACGAAGA+AGG - chr3.1:88292066-88292085 None:intergenic 50.0%
AAGTACCTTCTGAGCACCCT+CGG - chr3.1:88292412-88292431 None:intergenic 50.0%
ACACAAAGCTTCGGGTGAAG+TGG - chr3.1:88292250-88292269 None:intergenic 50.0%
ACGCTTGTCTTCCTTCTTCG+TGG + chr3.1:88292052-88292071 MS.gene014614:CDS 50.0%
AGCTTGGGAAGGGAGGATTT+GGG + chr3.1:88289732-88289751 MS.gene014614:CDS 50.0%
AGGACGATTGACCATGGAAG+AGG + chr3.1:88292544-88292563 MS.gene014614:CDS 50.0%
AGGGGCCTAATGTCAGGATT+TGG - chr3.1:88292384-88292403 None:intergenic 50.0%
ATTGTTATGTCCCGTGGTGC+TGG + chr3.1:88293393-88293412 MS.gene014614:CDS 50.0%
CATTAGGCCCCTAAATACCG+AGG + chr3.1:88292392-88292411 MS.gene014614:CDS 50.0%
CCATAGCTGGAGCTAGTAAC+GGG + chr3.1:88293088-88293107 MS.gene014614:CDS 50.0%
CCCATTCGGACCTTCTTCTT+TGG - chr3.1:88292584-88292603 None:intergenic 50.0%
CGTCCCTTGTAATGTACTCG+TGG - chr3.1:88290283-88290302 None:intergenic 50.0%
CGTTGGCGTGATAGTTCAAC+TGG + chr3.1:88291820-88291839 MS.gene014614:CDS 50.0%
CTCATTATGGATGCTGGCAC+TGG + chr3.1:88292845-88292864 MS.gene014614:CDS 50.0%
CTCTGTAAATCCAGCACCAC+GGG - chr3.1:88293406-88293425 None:intergenic 50.0%
CTGAGCACCCTCGGTATTTA+GGG - chr3.1:88292403-88292422 None:intergenic 50.0%
GCATGTATTGGGTCCCTGTA+AGG - chr3.1:88293266-88293285 None:intergenic 50.0%
GCCATAGCTGGAGCTAGTAA+CGG + chr3.1:88293087-88293106 MS.gene014614:CDS 50.0%
GCTAGTGTGCATGCACATCT+TGG + chr3.1:88291986-88292005 MS.gene014614:CDS 50.0%
GCTCTGTAAATCCAGCACCA+CGG - chr3.1:88293407-88293426 None:intergenic 50.0%
GGAAGACAAGCGTGTAAGCA+AGG - chr3.1:88292045-88292064 None:intergenic 50.0%
GGTGGCATGTATTGCAATCG+AGG + chr3.1:88290578-88290597 MS.gene014614:CDS 50.0%
GTACATTACAAGGGACGGCA+AGG + chr3.1:88290286-88290305 MS.gene014614:CDS 50.0%
TAGGGTGAGGTCCATGCTAA+GGG + chr3.1:88291026-88291045 MS.gene014614:intron 50.0%
TCAGTGAGACGGTTTATGCG+AGG - chr3.1:88289160-88289179 None:intergenic 50.0%
TCTGAGCACCCTCGGTATTT+AGG - chr3.1:88292404-88292423 None:intergenic 50.0%
TGAGACGGTTTATGCGAGGT+CGG - chr3.1:88289156-88289175 None:intergenic 50.0%
TGAGCACCCTCGGTATTTAG+GGG - chr3.1:88292402-88292421 None:intergenic 50.0%
TGATCCTGGTACCCTTAGCA+TGG - chr3.1:88291040-88291059 None:intergenic 50.0%
TGGGCAATTGTTATGTCCCG+TGG + chr3.1:88293387-88293406 MS.gene014614:CDS 50.0%
TGGGCACTCATTATGGATGC+TGG + chr3.1:88292839-88292858 MS.gene014614:CDS 50.0%
TTCTTCGTGGTCGGTTACCT+TGG + chr3.1:88292065-88292084 MS.gene014614:CDS 50.0%
! AACCCAAGTTCCACTTGCTG+TGG + chr3.1:88291128-88291147 MS.gene014614:intron 50.0%
! GAGGGTGAGACTCATTTTCC+TGG + chr3.1:88290631-88290650 MS.gene014614:intron 50.0%
! GCTTTTGTCCTGCACCTTTC+CGG + chr3.1:88292271-88292290 MS.gene014614:CDS 50.0%
! TCAATCACGGAGCACCACAA+TGG - chr3.1:88289828-88289847 None:intergenic 50.0%
! TCTTGTTATCCAGAGGGGTG+AGG + chr3.1:88290988-88291007 MS.gene014614:intron 50.0%
! TGGTGCTGGATTTACAGAGC+AGG + chr3.1:88293407-88293426 MS.gene014614:CDS 50.0%
!! AAATACCGAGGGTGCTCAGA+AGG + chr3.1:88292404-88292423 MS.gene014614:CDS 50.0%
!! AGCTAGTAACGGGTCCTCAT+TGG + chr3.1:88293098-88293117 MS.gene014614:CDS 50.0%
!! TGGTGCCGTTGAGGTATGTA+CGG + chr3.1:88289790-88289809 MS.gene014614:intron 50.0%
!! TTCCACTTGCTGTGGCCTAT+GGG + chr3.1:88291136-88291155 MS.gene014614:intron 50.0%
AGGCCACAGCAAGTGGAACT+TGG - chr3.1:88291134-88291153 None:intergenic 55.0%
ATTCCTTCTGGTCTGTGCGG+CGG - chr3.1:88289227-88289246 None:intergenic 55.0%
CACAGACCAGAAGGAATCGG+AGG + chr3.1:88289230-88289249 MS.gene014614:CDS 55.0%
CCCGTTACTAGCTCCAGCTA+TGG - chr3.1:88293091-88293110 None:intergenic 55.0%
CCGATTCCTTCTGGTCTGTG+CGG - chr3.1:88289230-88289249 None:intergenic 55.0%
CCGCACAGACCAGAAGGAAT+CGG + chr3.1:88289227-88289246 MS.gene014614:CDS 55.0%
CTTCTGCCTCCGATTCCTTC+TGG - chr3.1:88289239-88289258 None:intergenic 55.0%
GAGACGGTTTATGCGAGGTC+GGG - chr3.1:88289155-88289174 None:intergenic 55.0%
GATAGGAAGCTTGGGAAGGG+AGG + chr3.1:88289725-88289744 MS.gene014614:CDS 55.0%
GCACATCTCAGGTGCCAAAC+AGG - chr3.1:88291167-88291186 None:intergenic 55.0%
GCCAAACAGGTTCACCCCAT+AGG - chr3.1:88291154-88291173 None:intergenic 55.0%
GCCTATGGGGTGAACCTGTT+TGG + chr3.1:88291150-88291169 MS.gene014614:intron 55.0%
GGCCACAGCAAGTGGAACTT+GGG - chr3.1:88291133-88291152 None:intergenic 55.0%
GTAGGGTGAGGTCCATGCTA+AGG + chr3.1:88291025-88291044 MS.gene014614:intron 55.0%
GTGTTGGGAAAGCCGCTCAT+CGG - chr3.1:88292759-88292778 None:intergenic 55.0%
TAGCATGGACCTCACCCTAC+TGG - chr3.1:88291025-88291044 None:intergenic 55.0%
TGTTCTTCCCCTGCCTGCAA+TGG + chr3.1:88291445-88291464 MS.gene014614:intron 55.0%
TTCTCATCAGGGGTTCCCGA+GGG - chr3.1:88291688-88291707 None:intergenic 55.0%
TTTCTCATCAGGGGTTCCCG+AGG - chr3.1:88291689-88291708 None:intergenic 55.0%
! ACAAACTGCCGGAAAGGTGC+AGG - chr3.1:88292282-88292301 None:intergenic 55.0%
! CCGGAGCTTTATCGGCACTA+CGG - chr3.1:88289423-88289442 None:intergenic 55.0%
! GAGTGGAGCTGCTTTGCTGA+AGG + chr3.1:88290185-88290204 MS.gene014614:intron 55.0%
! GTGTTGCTGGCTGACCCATT+CGG - chr3.1:88292598-88292617 None:intergenic 55.0%
! TTCGGCTCCCGGAGCTTTAT+CGG - chr3.1:88289431-88289450 None:intergenic 55.0%
!! AGGTCCATGCTAAGGGTACC+AGG + chr3.1:88291033-88291052 MS.gene014614:intron 55.0%
!! CCGTAGTGCCGATAAAGCTC+CGG + chr3.1:88289420-88289439 MS.gene014614:CDS 55.0%
!! CGTAGTGCCGATAAAGCTCC+GGG + chr3.1:88289421-88289440 MS.gene014614:CDS 55.0%
!! GAGGGTGCTCAGAAGGTACT+TGG + chr3.1:88292411-88292430 MS.gene014614:intron 55.0%
!! GTTCCACTTGCTGTGGCCTA+TGG + chr3.1:88291135-88291154 MS.gene014614:intron 55.0%
!! TCCACTTGCTGTGGCCTATG+GGG + chr3.1:88291137-88291156 MS.gene014614:intron 55.0%
ACCCCATAGGCCACAGCAAG+TGG - chr3.1:88291141-88291160 None:intergenic 60.0%
CAGAACCAGCTCCTACGCGT+CGG - chr3.1:88289772-88289791 None:intergenic 60.0%
CGGACCTCCACATGAATGGC+AGG + chr3.1:88290126-88290145 MS.gene014614:CDS 60.0%
CGTGGTCGGTTACCTTGGCA+AGG + chr3.1:88292070-88292089 MS.gene014614:CDS 60.0%
CTCCCTTCTTCTTCGGCTCC+CGG - chr3.1:88289442-88289461 None:intergenic 60.0%
CTCCGGGAGCCGAAGAAGAA+GGG + chr3.1:88289437-88289456 MS.gene014614:CDS 60.0%
GCGGCGCGTTATCAGTGAGA+CGG - chr3.1:88289171-88289190 None:intergenic 60.0%
GGCCACTGCTGGCACTAGAT+GGG + chr3.1:88293368-88293387 MS.gene014614:CDS 60.0%
GTCACTGCTATGGCCACTGC+TGG + chr3.1:88293357-88293376 MS.gene014614:CDS 60.0%
GTCTATGTTGGCCGACGCGT+AGG + chr3.1:88289758-88289777 MS.gene014614:CDS 60.0%
TAAGGCGAGACTCAGGCAGC+AGG - chr3.1:88290718-88290737 None:intergenic 60.0%
TGCCCATCTAGTGCCAGCAG+TGG - chr3.1:88293373-88293392 None:intergenic 60.0%
TGGCCACTGCTGGCACTAGA+TGG + chr3.1:88293367-88293386 MS.gene014614:CDS 60.0%
TGGGTCAGCCAGCAACACAG+TGG + chr3.1:88292600-88292619 MS.gene014614:CDS 60.0%
! TCTCACTGATAACGCGCCGC+CGG + chr3.1:88289171-88289190 MS.gene014614:CDS 60.0%
!! AGCTGGTTCTGGTGCCGTTG+AGG + chr3.1:88289781-88289800 MS.gene014614:CDS 60.0%
CGAGGTCGGGTACGCAACTC+AGG - chr3.1:88289142-88289161 None:intergenic 65.0%
GCTCCGGGAGCCGAAGAAGA+AGG + chr3.1:88289436-88289455 MS.gene014614:CDS 65.0%
! CGACGCGTAGGAGCTGGTTC+TGG + chr3.1:88289770-88289789 MS.gene014614:CDS 65.0%
CCACCGCCGCACAGACCAGA+AGG + chr3.1:88289221-88289240 MS.gene014614:CDS 70.0%
CCTTCTGGTCTGTGCGGCGG+TGG - chr3.1:88289224-88289243 None:intergenic 70.0%
GTTGGCCGACGCGTAGGAGC+TGG + chr3.1:88289764-88289783 MS.gene014614:CDS 70.0%
AGCGACGGCTCTCCTCCCGC+CGG - chr3.1:88289200-88289219 None:intergenic 75.0%
CTGTGCGGCGGTGGCAGCGA+CGG - chr3.1:88289215-88289234 None:intergenic 75.0%
GATAACGCGCCGCCGGTCGC+CGG + chr3.1:88289178-88289197 MS.gene014614:CDS 75.0%
! GCTCTCCTCCCGCCGGCGAC+CGG - chr3.1:88289193-88289212 None:intergenic 80.0%
! AACGCGCCGCCGGTCGCCGG+CGG + chr3.1:88289181-88289200 MS.gene014614:CDS 85.0%
! CTCCTCCCGCCGGCGACCGG+CGG - chr3.1:88289190-88289209 None:intergenic 85.0%
! ACGCGCCGCCGGTCGCCGGC+GGG + chr3.1:88289182-88289201 MS.gene014614:CDS 90.0%
! CGCCGCCGGTCGCCGGCGGG+AGG + chr3.1:88289185-88289204 MS.gene014614:CDS 95.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 88289136 88293850 88289136 ID=MS.gene014614
chr3.1 mRNA 88289136 88293850 88289136 ID=MS.gene014614.t1;Parent=MS.gene014614
chr3.1 exon 88289136 88289483 88289136 ID=MS.gene014614.t1.exon1;Parent=MS.gene014614.t1
chr3.1 CDS 88289136 88289483 88289136 ID=cds.MS.gene014614.t1;Parent=MS.gene014614.t1
chr3.1 exon 88289692 88289802 88289692 ID=MS.gene014614.t1.exon2;Parent=MS.gene014614.t1
chr3.1 CDS 88289692 88289802 88289692 ID=cds.MS.gene014614.t1;Parent=MS.gene014614.t1
chr3.1 exon 88290082 88290155 88290082 ID=MS.gene014614.t1.exon3;Parent=MS.gene014614.t1
chr3.1 CDS 88290082 88290155 88290082 ID=cds.MS.gene014614.t1;Parent=MS.gene014614.t1
chr3.1 exon 88290255 88290324 88290255 ID=MS.gene014614.t1.exon4;Parent=MS.gene014614.t1
chr3.1 CDS 88290255 88290324 88290255 ID=cds.MS.gene014614.t1;Parent=MS.gene014614.t1
chr3.1 exon 88290407 88290462 88290407 ID=MS.gene014614.t1.exon5;Parent=MS.gene014614.t1
chr3.1 CDS 88290407 88290462 88290407 ID=cds.MS.gene014614.t1;Parent=MS.gene014614.t1
chr3.1 exon 88290563 88290634 88290563 ID=MS.gene014614.t1.exon6;Parent=MS.gene014614.t1
chr3.1 CDS 88290563 88290634 88290563 ID=cds.MS.gene014614.t1;Parent=MS.gene014614.t1
chr3.1 exon 88291642 88291736 88291642 ID=MS.gene014614.t1.exon7;Parent=MS.gene014614.t1
chr3.1 CDS 88291642 88291736 88291642 ID=cds.MS.gene014614.t1;Parent=MS.gene014614.t1
chr3.1 exon 88291815 88291881 88291815 ID=MS.gene014614.t1.exon8;Parent=MS.gene014614.t1
chr3.1 CDS 88291815 88291881 88291815 ID=cds.MS.gene014614.t1;Parent=MS.gene014614.t1
chr3.1 exon 88291970 88292099 88291970 ID=MS.gene014614.t1.exon9;Parent=MS.gene014614.t1
chr3.1 CDS 88291970 88292099 88291970 ID=cds.MS.gene014614.t1;Parent=MS.gene014614.t1
chr3.1 exon 88292207 88292425 88292207 ID=MS.gene014614.t1.exon10;Parent=MS.gene014614.t1
chr3.1 CDS 88292207 88292425 88292207 ID=cds.MS.gene014614.t1;Parent=MS.gene014614.t1
chr3.1 exon 88292518 88292660 88292518 ID=MS.gene014614.t1.exon11;Parent=MS.gene014614.t1
chr3.1 CDS 88292518 88292660 88292518 ID=cds.MS.gene014614.t1;Parent=MS.gene014614.t1
chr3.1 exon 88292739 88292913 88292739 ID=MS.gene014614.t1.exon12;Parent=MS.gene014614.t1
chr3.1 CDS 88292739 88292913 88292739 ID=cds.MS.gene014614.t1;Parent=MS.gene014614.t1
chr3.1 exon 88293045 88293135 88293045 ID=MS.gene014614.t1.exon13;Parent=MS.gene014614.t1
chr3.1 CDS 88293045 88293135 88293045 ID=cds.MS.gene014614.t1;Parent=MS.gene014614.t1
chr3.1 exon 88293271 88293428 88293271 ID=MS.gene014614.t1.exon14;Parent=MS.gene014614.t1
chr3.1 CDS 88293271 88293428 88293271 ID=cds.MS.gene014614.t1;Parent=MS.gene014614.t1
chr3.1 exon 88293521 88293709 88293521 ID=MS.gene014614.t1.exon15;Parent=MS.gene014614.t1
chr3.1 CDS 88293521 88293709 88293521 ID=cds.MS.gene014614.t1;Parent=MS.gene014614.t1
chr3.1 exon 88293791 88293850 88293791 ID=MS.gene014614.t1.exon16;Parent=MS.gene014614.t1
chr3.1 CDS 88293791 88293850 88293791 ID=cds.MS.gene014614.t1;Parent=MS.gene014614.t1
Gene Sequence

>MS.gene014614

ATGCCTGAGTTGCGTACCCGACCTCGCATAAACCGTCTCACTGATAACGCGCCGCCGGTCGCCGGCGGGAGGAGAGCCGTCGCTGCCACCGCCGCACAGACCAGAAGGAATCGGAGGCAGAAGAAGAAGAAGAACACGATCGTTGCCGAGAAAATCGAAAACATTGTGAATAACGACGACGAAACAGGAGTAGAGAGATTGAAAGAAGAGGAAGGAGAGAATAAGAAGAAGGCAGTGGTTAGGGTTTCTAGAGAGGAAGCTATGGATGAGTACGATAGTGGTGGCCGTAGTGCCGATAAAGCTCCGGGAGCCGAAGAAGAAGGGAGTACAACTCCACTTCCTGAGAAGGTGATTTTGATTCCTCAGAAATGTTCATAGTGAAGCATGCAAATGTTTTTGTTTTCTTCTCTATTTTTGTTTCTTGTTAATGTTTTGTTGCTAATTCGTTGTTTCTAGTTGAGTCAGACGTTATGGATTACAGCAAATTTTTTTGTTAGAAGATAATTTTTGTCATGTGTTAGGAATTTTAATGTATTTTGTTCTTTCTTGATTACAGATTCAAGTTGGTGGTTCTCCATTATATAGATTAGATAGGAAGCTTGGGAAGGGAGGATTTGGGCAAGTCTATGTTGGCCGACGCGTAGGAGCTGGTTCTGGTGCCGTTGAGGTATGTACGGTGTTTATGTCTGCCATTGTGGTGCTCCGTGATTGATACATGCTGCCATTTGGGTGTCTGAATTTTTTAATTTTGTAAGGGTTGTTACATAATATTTTAGTTGGAAAAAAAAAACTTTATAAAATGTAAGGGCGTTACGACCGTTATTTTGTGCCGAAGCAACGGGAATAGATATGGTGATTAAATAACATTGTTGTGGGAAAAAATTTGTACACCAAAGGCATCTACGACTTTTATAGATAGTTACAGATATTGCTCCAATAATTGCAGGTAGCATTAAAATTTGAGCATAGAAACAGCAAAGGGTGCAATTACGGACCTCCACATGAATGGCAGGTTTACAAGTGAGTTTACCCTCTTTTCTGTTTCAATAGAGTGGAGCTGCTTTGCTGAAGGCATTTTCTATGCATGAATGCTAACTTTGCCATGCTCACTTTTTATAGCACATTAGGTGGTAGTCATGGTGTTCCACGAGTACATTACAAGGGACGGCAAGGTGACTACTACATTATGGTATGTGCTTGTAAGTTTTTTAATAAAGTAATGGGGGTTTCTATTGTCTCTGAAGGTTTTTGTAACATAATGTTACACACAGGTCATGGATATGCTTGGCTCTAGTCTATGGGATGTTTGGAATAACAACTCACACACGTAAGTATCTCTCTGTAATTTTATTGAAATGTAATTCATATTTTTTGTAAATGTCTTGGTCAATATAGCATGTCTAACCTTAGTTCTTTTTTGGATCTAGGATGTCTACTGAAATGGTGGCATGTATTGCAATCGAGGCTATCTCTATATTAGAGAAGATGCATTGTAGAGGGTGAGACTCATTTTCCTGGTTATATTATATTTATTATTTATACATGGGTTTTCTTTACTAACAGATTGTCTATGGGGCAGCCTGCTGCCTGAGTCTCGCCTTATGTTATCATTTGGGTGTTCCGTTTTTTTACCTCATGGGGAAACACGTTCAATCATTTGTTATTGACTATGCGTGTCACAATGAAACAACATAGTTTTTTTTTTTACCCCGAGGTTGAGCAACATTTATTTATGCAAAAATAAATCGGTTGGGAAACTATTACATCTGAAATTCTTCTGATTTAGCTCTGGATCATATAATAGAATTTGCTCATACTGTTTTACTAAATTAAGTGTTGTGGAGGAGAGGTTTCTTGTTATCCAGAGGGGTGAGGTTTCTTTTTATCCAGTAGGGTGAGGTCCATGCTAAGGGTACCAGGATCAGTGTGTCAAGCTTAATAATTTTTAACTCCCTGCAGTTTTCTCATTAGTTCAGACTGAGAGCAGGAGTTAACCCAAGTTCCACTTGCTGTGGCCTATGGGGTGAACCTGTTTGGCACCTGAGATGTGCTCATGAAAAGTTGTGCACACACTTCATTTTGAAATTTTTCCATTACTGTATCTCAATTAAATTATTATATCATTCTGTGATTATGATAGGGACTTGGGTATTATGGGATTCATAAGTCCCAAATCAAGTAGTATGGCGTGTTGGGTGAGTATTTTAGTAGATTGGTTCTTCCTCCTTGATAGCTAGCTTTTAGGATTCCTCAAGTGCTCAGATACTTGTCATATTACAGTGTATGATCCATGCCCTCAAATTTGTTTTTGTTCTTCCCCTGCCTGCAATGGTCAATTAGTAAATACTTAAATTGCAATTATTGCTTTATCAATTACCATGCAATACCAATGTTAGTAATATAATAGATATACAAGTTTCAAATGATTTTTGTACATGTGCTCTAGTATACGTGAATTGCATCTTGTTGCAAAGATCAATTTTTCATCCTGCTGTTGTTGTTGCAGATATGTGCATGGTGATGTAAAGCCTGAAAACTTCTTGCTTGGACCCTCGGGAACCCCTGATGAGAAAAAGTTGTTTCTGGTTGATCTTGGATTAGGTAAAAAAAAAGCCATGTTACCCTTTGATGCTTTCATTGTCAATGAAGATATGCTTATTCTCTCACTTTTCTACACAGCAACTCGTTGGCGTGATAGTTCAACTGGCCTTCATGTTGATTATGATCAACGCCCAGATGTATTTAGGTTTGTTCTTTATTTAGCTTCTACAAACCTTATTTAAATCAATGTATGTATGGTTTTTGAATGATTCTGTATATCATATTCTTGGCAGGGGAACAGTTCGTTATGCTAGTGTGCATGCACATCTTGGTAGAACAAGTAGCAGGAGAGATGACTTGGAATCCCTTGCTTACACGCTTGTCTTCCTTCTTCGTGGTCGGTTACCTTGGCAAGGATATCAGGTTATCTTTTTTCAAATTTGCTTATCAATTTTTTTTCTTTCAAATTTAATTACTTTAGTGTTAATACTACAAGAAAAGCATGATTCTTATGAAATTGTTTGTTACAGGGAGAAAATAAAGGATTTCTTGTCTGCAAGAAAAAGATGGCCACTTCACCCGAAGCTTTGTGTTGCTTTTGTCCTGCACCTTTCCGGCAGTTTGTAGAATATGTAGTAAATTTGAAGTTTGATGAAGAACCAAATTATGCAAAATACATATCCCTTTTTGATGGAATTGTAGGTCCAAATCCTGACATTAGGCCCCTAAATACCGAGGGTGCTCAGAAGGTACTTGGTTTATTATTACTTTACATGTGTTATATCATTTAAGGATTCAGAGCCATACTCTTAAAGCCCTTTTATGGGTTTGTGTTGTGAAGCTTATATGTCAGGTTGGACAAAAGAGAGGACGATTGACCATGGAAGAGGATGATGATGAACAACCAAAGAAGAAGGTCCGAATGGGTCAGCCAGCAACACAGTGGATTAGTGTTTACAATGCTCGTAGACCAATGAAACAAAGGTTTTGAGCTGACATGACATGATATTTTGCTGTTATTGTATAGTTGACCCAGTTTTGACTTTCTATATTTTGGCGTAGGTATCATTACAATGTGGCCGATGAGCGGCTTTCCCAACACATTGTAAAAGGAAATGAAGATGGTTTATTTATTAGCAGTGTGGCTTCTTGTGCTAGTCTTTGGGCACTCATTATGGATGCTGGCACTGGTTTCACATCACAAGTTTACGAACTCTCTTCCAGTTTTCTTCACAAGGTTGGTTAATTTTCATTTTTCAGTTACTCTACTATCTATTGTAATACAATTTTAGTGATATTTTTATTTGCGTTATATTAAATTCATTTTGAAGTTTATACAATTTGACAAATCATGAATCTGTTTCACAGGAATGGATTATGGAACAGTGGGATAAGAATTATTACATCAGTGCCATAGCTGGAGCTAGTAACGGGTCCTCATTGGTTGTAATGTCAAAAGGTTAAAGTCATATTCTTGATGCATTATATATTTAGGATGGAAACAGTTGACTTGACTATGCATTGCATGATATGACCAGTAGTGTTGTGTTTAAATCTTGTCTCACTTTTATTTGTGATCTGCTGTTCCTTACAGGGACCCAATACATGCAACAATCCTATAAAGTCAGTGACTCGTTTCCATTTAAGTGGATCAACAAAAAATGGAGGGAAGGATTTTTTGTCACTGCTATGGCCACTGCTGGCACTAGATGGGCAATTGTTATGTCCCGTGGTGCTGGATTTACAGAGCAGGTTTTTTTCTTTGTTTTAGATTGAAAATTTTGTGACAGTGAAGAATTCTATCTGACATGTATATCTTCTTTTCTCTCTAAACTCGATGCTAGGTTGTGGAACTTGATTTCCTGTACCCTAGTGAAGGTATTCATCGAAGGTGGGAAAACAATTACCGCATTACTGCAACTGCTGCAACGCCTGATCAAGCTGCTTTTATTTTAAGTGTCCCAAGAAGAAAACCACCTGATGAAACTCAAGAAACGCTCCGCACGTCTGATTTTCCTAGTACTCATGTTAAGGTAAAATTGTGCACCTGATTTTCATGTATTCATTGTCAATCAACTATAATACATGCTTATATTTGATATATTTTTCTGCAGGAAAAATGGGCAAAGAACCTCTATATCGCATCTATTAGTTATGGGAGAACAGTTTCATAA
Protein sequence

>MS.gene014614.t1

MPELRTRPRINRLTDNAPPVAGGRRAVAATAAQTRRNRRQKKKKNTIVAEKIENIVNNDDETGVERLKEEEGENKKKAVVRVSREEAMDEYDSGGRSADKAPGAEEEGSTTPLPEKIQVGGSPLYRLDRKLGKGGFGQVYVGRRVGAGSGAVEVALKFEHRNSKGCNYGPPHEWQVYNTLGGSHGVPRVHYKGRQGDYYIMVMDMLGSSLWDVWNNNSHTMSTEMVACIAIEAISILEKMHCRGYVHGDVKPENFLLGPSGTPDEKKLFLVDLGLATRWRDSSTGLHVDYDQRPDVFRGTVRYASVHAHLGRTSSRRDDLESLAYTLVFLLRGRLPWQGYQGENKGFLVCKKKMATSPEALCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPLNTEGAQKLICQVGQKRGRLTMEEDDDEQPKKKVRMGQPATQWISVYNARRPMKQRYHYNVADERLSQHIVKGNEDGLFISSVASCASLWALIMDAGTGFTSQVYELSSSFLHKEWIMEQWDKNYYISAIAGASNGSSLVVMSKGTQYMQQSYKVSDSFPFKWINKKWREGFFVTAMATAGTRWAIVMSRGAGFTEQVVELDFLYPSEGIHRRWENNYRITATAATPDQAAFILSVPRRKPPDETQETLRTSDFPSTHVKEKWAKNLYIASISYGRTVS