Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20961.t1 | XP_003591256.1 | 81.2 | 1169 | 169 | 5 | 1 | 1155 | 1 | 1132 | 9.30E-171 | 611.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20961.t1 | G7IAC6 | 81.2 | 1169 | 169 | 5 | 1 | 1155 | 1 | 1132 | 6.7e-171 | 611.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052071 | MS.gene20961 | 0.819968 | 8.79E-53 | -1.69E-46 |
| MS.gene055204 | MS.gene20961 | 0.826226 | 3.05E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene20961 | MS.gene26770 | PPI |
| MS.gene021407 | MS.gene20961 | PPI |
| MS.gene014614 | MS.gene20961 | PPI |
| MS.gene064134 | MS.gene20961 | PPI |
| MS.gene91186 | MS.gene20961 | PPI |
| MS.gene31688 | MS.gene20961 | PPI |
| MS.gene20961 | MS.gene030172 | PPI |
| MS.gene20961 | MS.gene40712 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20961.t1 | MTR_1g084990 | 86.581 | 1170 | 104 | 6 | 1 | 1155 | 1 | 1132 | 0.0 | 1753 |
| MS.gene20961.t1 | MTR_1g084990 | 86.297 | 1153 | 105 | 6 | 18 | 1155 | 19 | 1133 | 0.0 | 1715 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 224 sgRNAs with CRISPR-Local
Find 311 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTGCACAAGTTTCACTAAA+TGG | 0.207773 | 1.3:-60425531 | MS.gene20961:CDS |
| TCAAAATGGAGCGGATAATT+TGG | 0.213840 | 1.3:-60425145 | MS.gene20961:CDS |
| AATGTTGTTCTGGTTCTTTC+CGG | 0.224028 | 1.3:+60426111 | None:intergenic |
| GGCTTGGCTGGAGTTTCTTT+TGG | 0.240569 | 1.3:+60425039 | None:intergenic |
| TTCTGGAATATCTTCTATCT+TGG | 0.261359 | 1.3:+60427351 | None:intergenic |
| TTGGTTTCTGTAGACTGTTC+TGG | 0.263852 | 1.3:+60426044 | None:intergenic |
| GATGCCAGTGTTTCTCTAAC+AGG | 0.266826 | 1.3:+60425198 | None:intergenic |
| TGCTTCTGAGCTGGCTTGGC+TGG | 0.271822 | 1.3:+60425027 | None:intergenic |
| TGTTTGAATGATTGAATTCC+TGG | 0.275194 | 1.3:+60425876 | None:intergenic |
| TTTGGAAGGTTCTTGGATAT+TGG | 0.282294 | 1.3:+60425057 | None:intergenic |
| CTCGCTTTCCTCCTCTTTGA+TGG | 0.284125 | 1.3:+60425572 | None:intergenic |
| CTTGGGTTGATTCTCTTCAT+TGG | 0.294084 | 1.3:+60427369 | None:intergenic |
| ATCAAATCTTTCTCCTCTTT+CGG | 0.297872 | 1.3:+60427523 | None:intergenic |
| TGCTTCTGACTCAGAGTTGT+TGG | 0.310843 | 1.3:+60425746 | None:intergenic |
| GTCTCAATATCCAAGTCTTT+TGG | 0.311504 | 1.3:+60425780 | None:intergenic |
| TACAAGTAGGTGAGGAAGTT+GGG | 0.326946 | 1.3:-60425656 | MS.gene20961:CDS |
| TCAACAATTGCAATTGCATT+TGG | 0.345919 | 1.3:+60427112 | None:intergenic |
| GAAGGTTCCACCGGATTTGC+AGG | 0.347717 | 1.3:+60425492 | None:intergenic |
| ATGTTTGTCTCCTTCTTCAT+TGG | 0.349888 | 1.3:+60428029 | None:intergenic |
| TCTGGAATATCTTCTATCTT+GGG | 0.352677 | 1.3:+60427352 | None:intergenic |
| CTGCACAAGTTTCACTAAAT+GGG | 0.354600 | 1.3:-60425530 | MS.gene20961:CDS |
| GGAAGTTGGGGAAACTATTA+AGG | 0.356667 | 1.3:-60425643 | MS.gene20961:CDS |
| AACATTGATCCTCTGTCTAA+TGG | 0.363760 | 1.3:-60425705 | MS.gene20961:CDS |
| GGGTTCTTCTTTCACTGTTT+CGG | 0.368570 | 1.3:+60427012 | None:intergenic |
| GCCTGACCTTGTGCATTGTC+AGG | 0.371395 | 1.3:+60427784 | None:intergenic |
| TGGACAGCATCAGATGCTTC+TGG | 0.372645 | 1.3:+60425348 | None:intergenic |
| TGTTCCGTTGAATGTTGTTC+TGG | 0.373987 | 1.3:+60426101 | None:intergenic |
| GAGGAGGAAACTATTCAAAA+TGG | 0.376197 | 1.3:-60425159 | MS.gene20961:CDS |
| ATCAAGAGAATTAGAATTTG+AGG | 0.394623 | 1.3:-60425997 | MS.gene20961:CDS |
| GGGACATTAAGGTCAAATAA+TGG | 0.398644 | 1.3:-60424900 | None:intergenic |
| TGTCTCCTTCTTCATTGGCT+AGG | 0.399098 | 1.3:+60428034 | None:intergenic |
| GAGCCTACAGAAACAGTAAA+AGG | 0.403452 | 1.3:-60426164 | MS.gene20961:CDS |
| ATGTTTGTCTCCGTCTTCAT+TGG | 0.407032 | 1.3:+60428239 | None:intergenic |
| ATGTTTATCTCCATCTTCAT+TGG | 0.407920 | 1.3:+60427816 | None:intergenic |
| TCTACTTTCTCTGTTTCAGC+TGG | 0.408285 | 1.3:+60425936 | None:intergenic |
| TTATCTGCAACAGTTTCTAA+TGG | 0.409102 | 1.3:+60427547 | None:intergenic |
| TATACAGCAATTTGTGAAGC+AGG | 0.409154 | 1.3:-60428301 | MS.gene20961:intron |
| GTAGCCGCATGTTCTTCTCT+TGG | 0.410790 | 1.3:+60426869 | None:intergenic |
| TTCTACAGCAATGACATCAT+TGG | 0.413723 | 1.3:+60426025 | None:intergenic |
| GCAGCATTAACCGTTGTGTT+AGG | 0.414445 | 1.3:+60425549 | None:intergenic |
| GTCTCCTTCTTCATTGGCTA+GGG | 0.415274 | 1.3:+60428035 | None:intergenic |
| TGATGATTCTTCAGCATTGA+AGG | 0.415379 | 1.3:-60428118 | MS.gene20961:CDS |
| TCTGGAATTGAAGATGTGTT+TGG | 0.420759 | 1.3:+60426062 | None:intergenic |
| TCAGACAACCCCTGCAAATC+CGG | 0.423774 | 1.3:-60425502 | MS.gene20961:CDS |
| TGATGATTCTTCCACATTGA+AGG | 0.427675 | 1.3:-60427905 | MS.gene20961:CDS |
| AAAGACAACAGCAGCGATAT+CGG | 0.428235 | 1.3:-60427065 | MS.gene20961:CDS |
| TGAATGCTTCTGAGCTGGCT+TGG | 0.431567 | 1.3:+60425023 | None:intergenic |
| AGTTGAAGATATTGTGAAGC+AGG | 0.432467 | 1.3:-60428091 | MS.gene20961:CDS |
| AAAGCCCGAGCTTGAGCCTC+TGG | 0.433641 | 1.3:-60427206 | MS.gene20961:CDS |
| TCGCCTCTCTCGAGGATACT+TGG | 0.437086 | 1.3:+60425328 | None:intergenic |
| GAAAAGATTGTTGTAAAAGA+TGG | 0.441459 | 1.3:-60425456 | MS.gene20961:CDS |
| GCCGAAAATAACCAAAGAAC+CGG | 0.441950 | 1.3:-60427173 | MS.gene20961:CDS |
| GCCTGACAATGCACAAGGTC+AGG | 0.445015 | 1.3:-60427785 | MS.gene20961:CDS |
| GAGGCCAGAGGCTCAAGCTC+GGG | 0.445083 | 1.3:+60427202 | None:intergenic |
| ATCTCCATCTTCATTGGCTA+GGG | 0.448597 | 1.3:+60427822 | None:intergenic |
| TATCTCCATCTTCATTGGCT+AGG | 0.448658 | 1.3:+60427821 | None:intergenic |
| TGTGCATCATCAACTATGTC+AGG | 0.454141 | 1.3:+60427646 | None:intergenic |
| TTGTTTGAATGCTTCTGAGC+TGG | 0.455331 | 1.3:+60425018 | None:intergenic |
| TTCAGAAACAAGTGCCGAAA+AGG | 0.455978 | 1.3:-60427233 | MS.gene20961:CDS |
| GACAGAAGGTGATGAGGTTA+AGG | 0.457357 | 1.3:-60427746 | MS.gene20961:CDS |
| TGAGGCCAGAGGCTCAAGCT+CGG | 0.460993 | 1.3:+60427201 | None:intergenic |
| GGCTCAACTTCAGTTGCCAC+TGG | 0.485901 | 1.3:+60426722 | None:intergenic |
| TTACTGAAGTTGAGGAAAAC+CGG | 0.486636 | 1.3:-60426130 | MS.gene20961:CDS |
| GAGACTAAGAATGACGAAGC+AGG | 0.488153 | 1.3:-60425960 | MS.gene20961:CDS |
| ACTGAAAATCAAGAACAAAC+AGG | 0.490972 | 1.3:-60425825 | MS.gene20961:CDS |
| GCTTGACCTTGTGCATTGTC+CGG | 0.493497 | 1.3:+60428207 | None:intergenic |
| CTTATCGCTGTGTCATGTAC+TGG | 0.494498 | 1.3:+60427469 | None:intergenic |
| TCTTCTTTCACTGTTTCGGT+AGG | 0.496000 | 1.3:+60427016 | None:intergenic |
| GCTTGACTTTGTGTATTGTC+CGG | 0.497113 | 1.3:+60427997 | None:intergenic |
| GTGAAGGCTGAGCTTGCAGC+AGG | 0.501138 | 1.3:-60427943 | MS.gene20961:CDS |
| GAAAGAAGTTGTTGGTGATA+CGG | 0.501939 | 1.3:-60425430 | MS.gene20961:CDS |
| AAACGGTAAAAGAAGAAGCC+GGG | 0.503049 | 1.3:-60426379 | MS.gene20961:CDS |
| GCAATTTGTGAAGCAGGAAA+AGG | 0.504607 | 1.3:-60428295 | MS.gene20961:CDS |
| TTTGGAGAAAGAACGAATTG+AGG | 0.504817 | 1.3:-60425127 | MS.gene20961:CDS |
| ATTGAATTCCTGGTTCACTT+TGG | 0.505726 | 1.3:+60425886 | None:intergenic |
| AGATATTGTGAAGCAGGAAA+AGG | 0.508365 | 1.3:-60428085 | MS.gene20961:CDS |
| AGATATTGTGAACCCGGAAA+AGG | 0.509782 | 1.3:-60427872 | MS.gene20961:CDS |
| GATTTCTTCCACCTTTGTCT+CGG | 0.511527 | 1.3:+60425239 | None:intergenic |
| AAGACAGCTACAATTGAAGC+AGG | 0.514361 | 1.3:-60425267 | MS.gene20961:CDS |
| ACAACATTCAACGGAACAAA+GGG | 0.517659 | 1.3:-60426096 | MS.gene20961:CDS |
| GTCACTAGTGAAAGCAAAGA+AGG | 0.517866 | 1.3:-60424974 | MS.gene20961:CDS |
| TGAAGTTGAGCCTACAGAAA+AGG | 0.518385 | 1.3:-60426711 | MS.gene20961:CDS |
| TCATCTTCTATCTTCGATGA+AGG | 0.519182 | 1.3:+60428180 | None:intergenic |
| ACCTCAACTTCAGTAGCTGC+AGG | 0.519771 | 1.3:+60426812 | None:intergenic |
| GATGGCAAGAAAGAAGTTGT+TGG | 0.519983 | 1.3:-60425438 | MS.gene20961:CDS |
| TTACAAGTAGGTGAGGAAGT+TGG | 0.520315 | 1.3:-60425657 | MS.gene20961:CDS |
| AGCTTCAACTTCAGTAGCCC+CGG | 0.521240 | 1.3:+60426361 | None:intergenic |
| AATTCCCTAGCCAATGAAGA+TGG | 0.523276 | 1.3:-60427826 | MS.gene20961:CDS |
| TTCACATCAGATTCAGTGGA+TGG | 0.527792 | 1.3:+60427430 | None:intergenic |
| GTTGATGATGCACAAAATCC+AGG | 0.528207 | 1.3:-60427637 | MS.gene20961:CDS |
| TCCTCAACTTCAGTAACCAC+AGG | 0.530922 | 1.3:+60426137 | None:intergenic |
| TTCCTTCACATCAGATTCAG+TGG | 0.531339 | 1.3:+60427426 | None:intergenic |
| AACATCACAGCAGATAGAAA+AGG | 0.534613 | 1.3:-60427404 | MS.gene20961:CDS |
| TGGGGAAACTATTAAGGAAG+TGG | 0.534716 | 1.3:-60425637 | MS.gene20961:CDS |
| AAACCTGTCCTCAGAGCCAA+AGG | 0.538748 | 1.3:-60424923 | MS.gene20961:CDS |
| GCTTCAACTTCAGCAGCCAC+AGG | 0.539201 | 1.3:+60426587 | None:intergenic |
| GCTTCAACTTCAGCAGCCAC+AGG | 0.539201 | 1.3:+60426632 | None:intergenic |
| TGCTGCAGAGGATGAAAAGA+AGG | 0.539585 | 1.3:-60425373 | MS.gene20961:CDS |
| TATTGAAGATATTGTGAACC+CGG | 0.541127 | 1.3:-60427878 | MS.gene20961:CDS |
| GACTAATCAATTTGAAGAGG+AGG | 0.541779 | 1.3:-60427272 | MS.gene20961:CDS |
| TGCAGCAGAAGAGATTGAAA+AGG | 0.543517 | 1.3:-60428142 | MS.gene20961:CDS |
| GAAACGGTAAAAGAAGAAGC+CGG | 0.544082 | 1.3:-60426380 | MS.gene20961:CDS |
| TGTTGCAGATAATCCGAAAG+AGG | 0.547830 | 1.3:-60427536 | MS.gene20961:CDS |
| GGCTACTGAAGTTGAGGCTA+CGG | 0.547997 | 1.3:-60426852 | MS.gene20961:CDS |
| AATTCCCTAGCCAATGAAGA+AGG | 0.551922 | 1.3:-60428039 | MS.gene20961:CDS |
| TTTATCTGCAGTCTCAACTT+CGG | 0.551981 | 1.3:+60426982 | None:intergenic |
| GCCTCAATTTCAGTAACCAC+GGG | 0.552823 | 1.3:+60426902 | None:intergenic |
| ATCCACTGAATCTGATGTGA+AGG | 0.554156 | 1.3:-60427428 | MS.gene20961:CDS |
| ATCACAAGAAATTTCACAAG+AGG | 0.555487 | 1.3:-60427143 | MS.gene20961:CDS |
| TTCTATCTTCGATGAAGGAG+TGG | 0.556570 | 1.3:+60428185 | None:intergenic |
| ACCCGTGGTTACTGAAATTG+AGG | 0.559345 | 1.3:-60426903 | MS.gene20961:CDS |
| TGAAGTTGATCCTACAGAAA+CGG | 0.561046 | 1.3:-60426261 | MS.gene20961:CDS |
| TGAAGTTGATCCTACAGAAA+CGG | 0.561046 | 1.3:-60426396 | MS.gene20961:CDS |
| TGAAGTTGATCCTACAGAAA+CGG | 0.561046 | 1.3:-60426486 | MS.gene20961:CDS |
| AACAACATTCAACGGAACAA+AGG | 0.561333 | 1.3:-60426097 | MS.gene20961:CDS |
| TGTAGTTGAGCCTACAGAAA+CGG | 0.561347 | 1.3:-60426441 | MS.gene20961:CDS |
| ACCTGCAGCTACTGAAGTTG+AGG | 0.561697 | 1.3:-60426813 | MS.gene20961:CDS |
| GGTTCACCCTCCAAAAGACT+TGG | 0.562523 | 1.3:-60425790 | MS.gene20961:CDS |
| GATGAAAACCAAAGTGAACC+AGG | 0.563084 | 1.3:-60425894 | MS.gene20961:CDS |
| ACTTCAGGAGAAGGTTCCAC+CGG | 0.563751 | 1.3:+60425483 | None:intergenic |
| TTCAAACAACATTATAGCAA+AGG | 0.565058 | 1.3:-60425004 | MS.gene20961:CDS |
| ACAAGTAGGTGAGGAAGTTG+GGG | 0.565814 | 1.3:-60425655 | MS.gene20961:CDS |
| GAAGACTGAGGAACAGAATG+AGG | 0.566055 | 1.3:-60425292 | MS.gene20961:CDS |
| TCATCCACTTCAGTAACCAC+AGG | 0.568495 | 1.3:+60425912 | None:intergenic |
| GGATCAACTTCAGTAACTAC+AGG | 0.568753 | 1.3:+60426407 | None:intergenic |
| AACCTGTCCTCAGAGCCAAA+GGG | 0.568915 | 1.3:-60424922 | MS.gene20961:CDS |
| GGCTCAACTTCAGTAGCCAC+AGG | 0.569717 | 1.3:+60426182 | None:intergenic |
| GTCAACCTTCGCCTCTCTCG+AGG | 0.572008 | 1.3:+60425320 | None:intergenic |
| TTCTGTATTCGACGAAGGAG+TGG | 0.573402 | 1.3:+60427975 | None:intergenic |
| AAGGTTCCACCGGATTTGCA+GGG | 0.573924 | 1.3:+60425493 | None:intergenic |
| AGCTTGAACTTCAGTAGCCA+CGG | 0.577924 | 1.3:+60426226 | None:intergenic |
| AAAAGTTGTTGTTGCTGCAG+AGG | 0.578943 | 1.3:-60425385 | MS.gene20961:CDS |
| TGAAGTTCAAGCTACAGAAA+CGG | 0.579101 | 1.3:-60426216 | MS.gene20961:CDS |
| GTCTCAACTTCGGTAACCAC+GGG | 0.579703 | 1.3:+60426947 | None:intergenic |
| GTCTCAACTTCGGTAACCAC+GGG | 0.579703 | 1.3:+60426992 | None:intergenic |
| AGAGGAAGAAGTGAAACCAA+AGG | 0.579767 | 1.3:-60425853 | MS.gene20961:CDS |
| TTGCAGCAGGAGAGATCGAA+AGG | 0.580543 | 1.3:-60427930 | MS.gene20961:CDS |
| TGAGGAGCCAGTGAAAATTG+AGG | 0.580572 | 1.3:-60425109 | MS.gene20961:CDS |
| GGAAAAGGACGAAGCTATTG+CGG | 0.580775 | 1.3:-60428070 | MS.gene20961:CDS |
| AACCTCATCACCTTCTGTCG+TGG | 0.582526 | 1.3:+60427750 | None:intergenic |
| AGTATCCTCGAGAGAGGCGA+AGG | 0.587010 | 1.3:-60425325 | MS.gene20961:CDS |
| TTCGGCTCTTCTGAGGCCAG+AGG | 0.587677 | 1.3:+60427190 | None:intergenic |
| TCACCTTCTGTCGTGGACGA+AGG | 0.588129 | 1.3:+60427757 | None:intergenic |
| GAAGATAGAAGATGAGGTGA+AGG | 0.590248 | 1.3:-60428172 | MS.gene20961:CDS |
| GGCTCAACTACAGTTGCCAC+AGG | 0.591973 | 1.3:+60426452 | None:intergenic |
| TTCAACGGAACAAAGGGAAG+AGG | 0.592510 | 1.3:-60426090 | MS.gene20961:CDS |
| TGAAGTTGAAGCTACAGAAA+CGG | 0.594350 | 1.3:-60426576 | MS.gene20961:CDS |
| TGAAGTTGAAGCTACAGAAA+CGG | 0.594350 | 1.3:-60426621 | MS.gene20961:CDS |
| AATTCAATCATTCAAACAAG+AGG | 0.595584 | 1.3:-60425871 | MS.gene20961:CDS |
| TCCTCTGTCTAATGGAGTGG+AGG | 0.595670 | 1.3:-60425697 | MS.gene20961:CDS |
| TGAACCTGTTAGAGAAACAC+TGG | 0.596965 | 1.3:-60425202 | MS.gene20961:CDS |
| AGAACCAGAACAACATTCAA+CGG | 0.596995 | 1.3:-60426105 | MS.gene20961:CDS |
| ACTCCTTCGTCCACGACAGA+AGG | 0.597046 | 1.3:-60427760 | MS.gene20961:CDS |
| GGCTCAACTACAGTAACTGC+AGG | 0.599075 | 1.3:+60426677 | None:intergenic |
| TACAGAAGGAGATGAAGTGA+AGG | 0.600041 | 1.3:-60427959 | MS.gene20961:CDS |
| AGACTAAGAATGACGAAGCA+GGG | 0.603890 | 1.3:-60425959 | MS.gene20961:CDS |
| AGAGCCTGTGGTTACTGAAG+TGG | 0.604395 | 1.3:-60425916 | MS.gene20961:CDS |
| CTAAGTGAACAATTACAAGT+AGG | 0.604657 | 1.3:-60425669 | MS.gene20961:CDS |
| TGATCCTCTGTCTAATGGAG+TGG | 0.604813 | 1.3:-60425700 | MS.gene20961:CDS |
| TATATCTGCAGTCTCAACTT+CGG | 0.606961 | 1.3:+60426937 | None:intergenic |
| TGAGACTAATCAATTTGAAG+AGG | 0.607768 | 1.3:-60427275 | MS.gene20961:CDS |
| GACAGCTACAATTGAAGCAG+GGG | 0.608684 | 1.3:-60425265 | MS.gene20961:CDS |
| ACCTGTGGTTACTGAAGTTG+AGG | 0.609370 | 1.3:-60426138 | MS.gene20961:CDS |
| AGCCTCAATTTCAGTAACCA+CGG | 0.610708 | 1.3:+60426901 | None:intergenic |
| TCCTCCACTCCATTAGACAG+AGG | 0.612429 | 1.3:+60425696 | None:intergenic |
| AGGTTCCACCGGATTTGCAG+GGG | 0.612836 | 1.3:+60425494 | None:intergenic |
| AATTGTTGAATCTTCAGTCG+AGG | 0.614945 | 1.3:-60427098 | MS.gene20961:CDS |
| AAAGCAAAGAAGGCTATCAC+CGG | 0.619421 | 1.3:-60424964 | MS.gene20961:CDS |
| AGTCTCAACTTCGGTAACCA+CGG | 0.620579 | 1.3:+60426946 | None:intergenic |
| AGTCTCAACTTCGGTAACCA+CGG | 0.620579 | 1.3:+60426991 | None:intergenic |
| TCATGCTTCTACTACTCATG+AGG | 0.620880 | 1.3:-60429764 | MS.gene20961:intron |
| TGAACAATTACAAGTAGGTG+AGG | 0.622772 | 1.3:-60425664 | MS.gene20961:CDS |
| AATTCTCTAGCCAATGAAGA+CGG | 0.623247 | 1.3:-60428249 | MS.gene20961:CDS |
| AGACAAACATGATGACAAGC+CGG | 0.625194 | 1.3:-60428016 | MS.gene20961:CDS |
| AGACAAACATGATGACAAGC+CGG | 0.625194 | 1.3:-60428226 | MS.gene20961:CDS |
| TCTCCTTCTGTATTCGACGA+AGG | 0.626375 | 1.3:+60427970 | None:intergenic |
| TTCATCGAAGATAGAAGATG+AGG | 0.627634 | 1.3:-60428178 | MS.gene20961:CDS |
| ACTCCTTCGTCGAATACAGA+AGG | 0.628116 | 1.3:-60427973 | MS.gene20961:CDS |
| AACAGTAAAAGGTGAACCTG+TGG | 0.629286 | 1.3:-60426153 | MS.gene20961:CDS |
| TAATGGCACCATCAAAGAGG+AGG | 0.633025 | 1.3:-60425580 | MS.gene20961:CDS |
| AGCAGGGGAGACCGAGACAA+AGG | 0.633613 | 1.3:-60425250 | MS.gene20961:CDS |
| GGATCAACTTCAGTAACCAC+AGG | 0.633996 | 1.3:+60426272 | None:intergenic |
| GGATCAACTTCAGTAACCAC+AGG | 0.633996 | 1.3:+60426497 | None:intergenic |
| GGATCAACTTCAGTAACCAC+AGG | 0.633996 | 1.3:+60426767 | None:intergenic |
| TGCACAAGTTTCACTAAATG+GGG | 0.634873 | 1.3:-60425529 | MS.gene20961:CDS |
| AACGGTAAAAGAAGAAGCCG+TGG | 0.635063 | 1.3:-60426243 | MS.gene20961:CDS |
| TTCAATAGAAACCTTCAATG+TGG | 0.635113 | 1.3:+60427894 | None:intergenic |
| GGAAAAGGACGAAGCCATTG+CGG | 0.635122 | 1.3:-60428280 | MS.gene20961:CDS |
| AAAAGACTTGGATATTGAGA+CGG | 0.635667 | 1.3:-60425778 | MS.gene20961:CDS |
| ACATGCGGCTACTGAAGTTG+AGG | 0.637223 | 1.3:-60426858 | MS.gene20961:CDS |
| TGGATGGTGTCTCATCATGA+TGG | 0.637874 | 1.3:+60427446 | None:intergenic |
| AACAGTAAAAGAAGAACCAG+TGG | 0.638830 | 1.3:-60426738 | MS.gene20961:CDS |
| AGACAGCTACAATTGAAGCA+GGG | 0.640274 | 1.3:-60425266 | MS.gene20961:CDS |
| AACAGTAAAAGTCGAACCTG+TGG | 0.643504 | 1.3:-60426288 | MS.gene20961:CDS |
| AACAGTAAAAGTCGAACCTG+TGG | 0.643504 | 1.3:-60426513 | MS.gene20961:CDS |
| AGGGGAGACCGAGACAAAGG+TGG | 0.643565 | 1.3:-60425247 | MS.gene20961:CDS |
| GACAACCCCTGCAAATCCGG+TGG | 0.647241 | 1.3:-60425499 | MS.gene20961:CDS |
| ATCTAATGGCACCATCAAAG+AGG | 0.649002 | 1.3:-60425583 | MS.gene20961:CDS |
| ACCTGTCCTCAGAGCCAAAG+GGG | 0.650165 | 1.3:-60424921 | MS.gene20961:CDS |
| AACGGTAAAAGAAGAAGCCG+GGG | 0.650469 | 1.3:-60426378 | MS.gene20961:CDS |
| GGAAACTATTCAAAATGGAG+CGG | 0.651455 | 1.3:-60425154 | MS.gene20961:CDS |
| AACAGAGAAAGTAGAGCCTG+TGG | 0.651574 | 1.3:-60425928 | MS.gene20961:CDS |
| GACAAGCCGGACAATGCACA+AGG | 0.656404 | 1.3:-60428213 | MS.gene20961:CDS |
| AACTGTAAAAGACGAACCTG+TGG | 0.663286 | 1.3:-60426648 | MS.gene20961:CDS |
| AACGGTAAAAGAAGAACCTG+TGG | 0.666816 | 1.3:-60426603 | MS.gene20961:CDS |
| AACGGTAAAAGAAGAACCTG+TGG | 0.668002 | 1.3:-60426468 | MS.gene20961:CDS |
| AACAGTAAAAGACGAACCTG+TGG | 0.668325 | 1.3:-60426783 | MS.gene20961:CDS |
| TATAGTAAACAAAGAACCCG+TGG | 0.669103 | 1.3:-60426918 | MS.gene20961:CDS |
| AACGGTAAAAGAAGAACCTG+TGG | 0.669255 | 1.3:-60426198 | MS.gene20961:CDS |
| GTCCACGACAGAAGGTGATG+AGG | 0.669709 | 1.3:-60427752 | MS.gene20961:CDS |
| AACAGTGAAAGAAGAACCCG+TGG | 0.675596 | 1.3:-60427008 | MS.gene20961:CDS |
| TGTCCAAGTATCCTCGAGAG+AGG | 0.676889 | 1.3:-60425331 | MS.gene20961:CDS |
| TAAAGTAAAAGAAGAACCCG+TGG | 0.677200 | 1.3:-60426963 | MS.gene20961:CDS |
| AGAACAAACAGGTGATACAG+TGG | 0.678688 | 1.3:-60425814 | MS.gene20961:CDS |
| ATCTTCAGTCGAGGCCAATG+AGG | 0.682162 | 1.3:-60427089 | MS.gene20961:CDS |
| GGAGAACACTACCAGTGTCG+AGG | 0.687107 | 1.3:-60425409 | MS.gene20961:CDS |
| GACAAGCCTGACAATGCACA+AGG | 0.699619 | 1.3:-60427790 | MS.gene20961:CDS |
| AACACCAAGAGAAGAACATG+CGG | 0.701473 | 1.3:-60426873 | MS.gene20961:CDS |
| AACAGTAAAAGAAGAACACG+TGG | 0.707095 | 1.3:-60426333 | MS.gene20961:CDS |
| AATTGAGGTTGAATCCACCA+AGG | 0.707557 | 1.3:-60425094 | MS.gene20961:CDS |
| CCTGTCCTCAGAGCCAAAGG+GGG | 0.709648 | 1.3:-60424920 | MS.gene20961:CDS |
| ACAAACAGGTGATACAGTGG+AGG | 0.715313 | 1.3:-60425811 | MS.gene20961:CDS |
| GGAAAGCGAGCCTAACACAA+CGG | 0.720344 | 1.3:-60425559 | MS.gene20961:CDS |
| GGTTGACATCAAGAAGACTG+AGG | 0.735500 | 1.3:-60425304 | MS.gene20961:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAACATTAATAGTTAAAT+CGG | + | chr1.3:60426368-60426387 | None:intergenic | 10.0% |
| !! | TTATATCTTTGAATTTGTAT+TGG | - | chr1.3:60425096-60425115 | MS.gene20961:CDS | 15.0% |
| !!! | ATTCTAAATTTTGAAAGTTA+TGG | - | chr1.3:60425237-60425256 | MS.gene20961:CDS | 15.0% |
| !! | AAACACAAAGCATATAAAAT+TGG | - | chr1.3:60425459-60425478 | MS.gene20961:CDS | 20.0% |
| !! | TTGATGTACAAAAGAATATA+TGG | + | chr1.3:60425360-60425379 | None:intergenic | 20.0% |
| !!! | ATTCACTTGTGAATATATTT+TGG | + | chr1.3:60425337-60425356 | None:intergenic | 20.0% |
| ! | AATTCAATCATTCAAACAAG+AGG | - | chr1.3:60428828-60428847 | MS.gene20961:intron | 25.0% |
| ! | ATCAAGAGAATTAGAATTTG+AGG | - | chr1.3:60428702-60428721 | MS.gene20961:intron | 25.0% |
| ! | ATTTGTAAGTTTGCAGAAAA+TGG | + | chr1.3:60425735-60425754 | None:intergenic | 25.0% |
| ! | CATAAATATCTGAGTTTGAA+AGG | + | chr1.3:60425217-60425236 | None:intergenic | 25.0% |
| ! | CATATATGTATCCACAAAAA+CGG | + | chr1.3:60426327-60426346 | None:intergenic | 25.0% |
| ! | GAAAAGATTGTTGTAAAAGA+TGG | - | chr1.3:60429243-60429262 | MS.gene20961:intron | 25.0% |
| ! | GAAAAGCAAGAAAGAAAAAA+AGG | - | chr1.3:60425564-60425583 | MS.gene20961:CDS | 25.0% |
| ! | GAATAAGCTAAAGAACAATA+TGG | - | chr1.3:60425758-60425777 | MS.gene20961:CDS | 25.0% |
| ! | GTTCATTCATGTAACATAAA+GGG | - | chr1.3:60425165-60425184 | MS.gene20961:CDS | 25.0% |
| ! | TGTTCATTCATGTAACATAA+AGG | - | chr1.3:60425164-60425183 | MS.gene20961:CDS | 25.0% |
| ! | TTCAAACAACATTATAGCAA+AGG | - | chr1.3:60429695-60429714 | MS.gene20961:intron | 25.0% |
| !! | AGTGAACATTTTATGAAACA+TGG | + | chr1.3:60426275-60426294 | None:intergenic | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+AGG | + | chr1.3:60425958-60425977 | None:intergenic | 25.0% |
| !! | ATTTCTTGTGATTCTTTTTC+CGG | + | chr1.3:60427548-60427567 | None:intergenic | 25.0% |
| !! | CTGAATGTTTTCTTCTATAT+TGG | - | chr1.3:60425810-60425829 | MS.gene20961:CDS | 25.0% |
| !!! | ATTAGATCCTTCACTTTTTT+CGG | + | chr1.3:60429103-60429122 | None:intergenic | 25.0% |
| !!! | CTTGTGAATATATTTTGGTA+CGG | + | chr1.3:60425332-60425351 | None:intergenic | 25.0% |
| !!! | TATAATTGATCAAGTACTGA+TGG | - | chr1.3:60425267-60425286 | MS.gene20961:CDS | 25.0% |
| AAAAGACTTGGATATTGAGA+CGG | - | chr1.3:60428921-60428940 | MS.gene20961:intron | 30.0% | |
| AAACAGTTTCACTGAAACTA+AGG | + | chr1.3:60426231-60426250 | None:intergenic | 30.0% | |
| ACATAACAAGAAAACACAGA+TGG | + | chr1.3:60425879-60425898 | None:intergenic | 30.0% | |
| ACTGAAAATCAAGAACAAAC+AGG | - | chr1.3:60428874-60428893 | MS.gene20961:intron | 30.0% | |
| AGAAAAAGAAGATGAAGTGA+AGG | - | chr1.3:60427088-60427107 | MS.gene20961:CDS | 30.0% | |
| ATCAAATCTTTCTCCTCTTT+CGG | + | chr1.3:60427179-60427198 | None:intergenic | 30.0% | |
| ATCACAAGAAATTTCACAAG+AGG | - | chr1.3:60427556-60427575 | MS.gene20961:CDS | 30.0% | |
| ATCCTAACATATCCATAGTT+TGG | - | chr1.3:60426196-60426215 | MS.gene20961:CDS | 30.0% | |
| ATCTAAATTCGAAAAAGACG+AGG | - | chr1.3:60429521-60429540 | MS.gene20961:intron | 30.0% | |
| ATGTTTATCTCCATCTTCAT+TGG | + | chr1.3:60426886-60426905 | None:intergenic | 30.0% | |
| ATTTCGATATAAGCTATCAC+TGG | - | chr1.3:60426057-60426076 | MS.gene20961:CDS | 30.0% | |
| CTAAGTGAACAATTACAAGT+AGG | - | chr1.3:60429030-60429049 | MS.gene20961:intron | 30.0% | |
| GAAAAAAGTGAAGGATCTAA+TGG | - | chr1.3:60429102-60429121 | MS.gene20961:intron | 30.0% | |
| GCAAGGTTTATATTAGCAAA+AGG | + | chr1.3:60425846-60425865 | None:intergenic | 30.0% | |
| TATTGAAGATATTGTGAACC+CGG | - | chr1.3:60426821-60426840 | MS.gene20961:CDS | 30.0% | |
| TCAACAATTGCAATTGCATT+TGG | + | chr1.3:60427590-60427609 | None:intergenic | 30.0% | |
| TGAGACTAATCAATTTGAAG+AGG | - | chr1.3:60427424-60427443 | MS.gene20961:CDS | 30.0% | |
| TGTTTGAATGATTGAATTCC+TGG | + | chr1.3:60428826-60428845 | None:intergenic | 30.0% | |
| TTATCTGCAACAGTTTCTAA+TGG | + | chr1.3:60427155-60427174 | None:intergenic | 30.0% | |
| TTCAATAGAAACCTTCAATG+TGG | + | chr1.3:60426808-60426827 | None:intergenic | 30.0% | |
| TTTCGATATAAGCTATCACT+GGG | - | chr1.3:60426058-60426077 | MS.gene20961:CDS | 30.0% | |
| ! | ACAATCTTTTCTTCAACTTC+AGG | + | chr1.3:60429234-60429253 | None:intergenic | 30.0% |
| ! | AGAATTAATCTTTTCCGCAA+TGG | + | chr1.3:60426436-60426455 | None:intergenic | 30.0% |
| ! | TCTGGAATATCTTCTATCTT+GGG | + | chr1.3:60427350-60427369 | None:intergenic | 30.0% |
| ! | TGATTTTCAGTTTCTTCCTT+TGG | + | chr1.3:60428865-60428884 | None:intergenic | 30.0% |
| !! | TTCTGGAATATCTTCTATCT+TGG | + | chr1.3:60427351-60427370 | None:intergenic | 30.0% |
| !! | TTTCAAAACATCCGTTTTTG+TGG | - | chr1.3:60426313-60426332 | MS.gene20961:CDS | 30.0% |
| !!! | TCTTCTTTTACTGTTTCTGT+AGG | + | chr1.3:60427956-60427975 | None:intergenic | 30.0% |
| AACAACATTCAACGGAACAA+AGG | - | chr1.3:60428602-60428621 | MS.gene20961:intron | 35.0% | |
| AACAGTAAAAGAAGAACACG+TGG | - | chr1.3:60428366-60428385 | MS.gene20961:intron | 35.0% | |
| AACAGTAAAAGAAGAACCAG+TGG | - | chr1.3:60427961-60427980 | MS.gene20961:CDS | 35.0% | |
| AACATCACAGCAGATAGAAA+AGG | - | chr1.3:60427295-60427314 | MS.gene20961:CDS | 35.0% | |
| AACATTGATCCTCTGTCTAA+TGG | - | chr1.3:60428994-60429013 | MS.gene20961:intron | 35.0% | |
| AATAAGCCGAGAACAACTTA+TGG | - | chr1.3:60426091-60426110 | MS.gene20961:CDS | 35.0% | |
| AATTCTCTAGCCAATGAAGA+CGG | - | chr1.3:60426450-60426469 | MS.gene20961:CDS | 35.0% | |
| AATTGTTGAATCTTCAGTCG+AGG | - | chr1.3:60427601-60427620 | MS.gene20961:CDS | 35.0% | |
| ACAACATTCAACGGAACAAA+GGG | - | chr1.3:60428603-60428622 | MS.gene20961:intron | 35.0% | |
| ACATCTCCATAAGTTGTTCT+CGG | + | chr1.3:60426100-60426119 | None:intergenic | 35.0% | |
| AGAACCAGAACAACATTCAA+CGG | - | chr1.3:60428594-60428613 | MS.gene20961:intron | 35.0% | |
| AGATATTGTGAAGCAGGAAA+AGG | - | chr1.3:60426614-60426633 | MS.gene20961:CDS | 35.0% | |
| AGTTGAAGATATTGTGAAGC+AGG | - | chr1.3:60426608-60426627 | MS.gene20961:CDS | 35.0% | |
| ATGTTTGTCTCCTTCTTCAT+TGG | + | chr1.3:60426673-60426692 | None:intergenic | 35.0% | |
| ATTGAATTCCTGGTTCACTT+TGG | + | chr1.3:60428816-60428835 | None:intergenic | 35.0% | |
| CTGCACAAGTTTCACTAAAT+GGG | - | chr1.3:60429169-60429188 | MS.gene20961:intron | 35.0% | |
| GACTAATCAATTTGAAGAGG+AGG | - | chr1.3:60427427-60427446 | MS.gene20961:CDS | 35.0% | |
| GAGGAGGAAACTATTCAAAA+TGG | - | chr1.3:60429540-60429559 | MS.gene20961:intron | 35.0% | |
| GGAAACTATTCAAAATGGAG+CGG | - | chr1.3:60429545-60429564 | MS.gene20961:intron | 35.0% | |
| TAAAGTAAAAGAAGAACCCG+TGG | - | chr1.3:60427736-60427755 | MS.gene20961:CDS | 35.0% | |
| TAAATTCGAAAAAGACGAGG+AGG | - | chr1.3:60429524-60429543 | MS.gene20961:intron | 35.0% | |
| TAACAAGAAAACACAGATGG+AGG | + | chr1.3:60425876-60425895 | None:intergenic | 35.0% | |
| TATACAGCAATTTGTGAAGC+AGG | - | chr1.3:60426398-60426417 | MS.gene20961:CDS | 35.0% | |
| TATAGTAAACAAAGAACCCG+TGG | - | chr1.3:60427781-60427800 | MS.gene20961:CDS | 35.0% | |
| TATATCTGCAGTCTCAACTT+CGG | + | chr1.3:60427765-60427784 | None:intergenic | 35.0% | |
| TCAAAATGGAGCGGATAATT+TGG | - | chr1.3:60429554-60429573 | MS.gene20961:intron | 35.0% | |
| TCATCTTCTATCTTCGATGA+AGG | + | chr1.3:60426522-60426541 | None:intergenic | 35.0% | |
| TGAACAATTACAAGTAGGTG+AGG | - | chr1.3:60429035-60429054 | MS.gene20961:intron | 35.0% | |
| TGAAGTTCAAGCTACAGAAA+CGG | - | chr1.3:60428483-60428502 | MS.gene20961:intron | 35.0% | |
| TGAAGTTGAAGCTACAGAAA+CGG | - | chr1.3:60428078-60428097 | MS.gene20961:CDS | 35.0% | |
| TGATGATTCTTCCACATTGA+AGG | - | chr1.3:60426794-60426813 | MS.gene20961:CDS | 35.0% | |
| TGCACAAGTTTCACTAAATG+GGG | - | chr1.3:60429170-60429189 | MS.gene20961:intron | 35.0% | |
| TGTAACATAAAGGGACTGAT+TGG | - | chr1.3:60425174-60425193 | MS.gene20961:CDS | 35.0% | |
| TTACTGAAGTTGAGGAAAAC+CGG | - | chr1.3:60428569-60428588 | MS.gene20961:intron | 35.0% | |
| TTCAAAAGAACCCTGTAAGA+GGG | + | chr1.3:60425629-60425648 | None:intergenic | 35.0% | |
| TTCATCGAAGATAGAAGATG+AGG | - | chr1.3:60426521-60426540 | MS.gene20961:CDS | 35.0% | |
| TTCTACAGCAATGACATCAT+TGG | + | chr1.3:60428677-60428696 | None:intergenic | 35.0% | |
| TTTATCTGCAGTCTCAACTT+CGG | + | chr1.3:60427720-60427739 | None:intergenic | 35.0% | |
| TTTGGAAGGTTCTTGGATAT+TGG | + | chr1.3:60429645-60429664 | None:intergenic | 35.0% | |
| TTTGGAGAAAGAACGAATTG+AGG | - | chr1.3:60429572-60429591 | MS.gene20961:intron | 35.0% | |
| ! | CAATATCCAAGTCTTTTGGA+GGG | + | chr1.3:60428918-60428937 | None:intergenic | 35.0% |
| ! | CTGAGTTTGAAAGGTACAAT+TGG | + | chr1.3:60425208-60425227 | None:intergenic | 35.0% |
| ! | GATTCAACCTCAATTTTCAC+TGG | + | chr1.3:60429600-60429619 | None:intergenic | 35.0% |
| ! | GTCTCAATATCCAAGTCTTT+TGG | + | chr1.3:60428922-60428941 | None:intergenic | 35.0% |
| ! | TCAATATCCAAGTCTTTTGG+AGG | + | chr1.3:60428919-60428938 | None:intergenic | 35.0% |
| ! | TCATCTTCTTTTTCTACACC+TGG | + | chr1.3:60427083-60427102 | None:intergenic | 35.0% |
| ! | TCGTCTTTTACAGTTTCTGT+AGG | + | chr1.3:60428046-60428065 | None:intergenic | 35.0% |
| ! | TCGTCTTTTACCTTTTCTGT+AGG | + | chr1.3:60428001-60428020 | None:intergenic | 35.0% |
| ! | TCTGGAATTGAAGATGTGTT+TGG | + | chr1.3:60428640-60428659 | None:intergenic | 35.0% |
| ! | TCTTCTTTTACCGTTTCTGT+AGG | + | chr1.3:60428091-60428110 | None:intergenic | 35.0% |
| ! | TGAAGTTGATCCTACAGAAA+CGG | - | chr1.3:60427943-60427962 | MS.gene20961:CDS | 35.0% |
| ! | TGATGATTCTTCAGCATTGA+AGG | - | chr1.3:60426581-60426600 | MS.gene20961:CDS | 35.0% |
| ! | TGATTCTTTTTCCGGTTCTT+TGG | + | chr1.3:60427540-60427559 | None:intergenic | 35.0% |
| ! | TGTTGTATCATTTTCCTTGG+TGG | + | chr1.3:60429622-60429641 | None:intergenic | 35.0% |
| ! | TTTTCTTCAACTTCAGGAGA+AGG | + | chr1.3:60429228-60429247 | None:intergenic | 35.0% |
| !! | AATGTTGTTCTGGTTCTTTC+CGG | + | chr1.3:60428591-60428610 | None:intergenic | 35.0% |
| !! | AGTTTCTTTTGGAAGGTTCT+TGG | + | chr1.3:60429652-60429671 | None:intergenic | 35.0% |
| !! | GAAAGAAGTTGTTGGTGATA+CGG | - | chr1.3:60429269-60429288 | MS.gene20961:intron | 35.0% |
| !! | GACATTAAGCACTGATATGA+TGG | + | chr1.3:60425936-60425955 | None:intergenic | 35.0% |
| !! | TCCGGTTCTTTGGTTATTTT+CGG | + | chr1.3:60427530-60427549 | None:intergenic | 35.0% |
| !!! | TCACCTTTTACTGTTTCTGT+AGG | + | chr1.3:60428541-60428560 | None:intergenic | 35.0% |
| !!! | TCGACTTTTACTGTTTCTGT+TGG | + | chr1.3:60428181-60428200 | None:intergenic | 35.0% |
| !!! | TGGTGTTGTATCATTTTCCT+TGG | + | chr1.3:60429625-60429644 | None:intergenic | 35.0% |
| AAACGGTAAAAGAAGAAGCC+GGG | - | chr1.3:60428320-60428339 | MS.gene20961:intron | 40.0% | |
| AAAGACAACAGCAGCGATAT+CGG | - | chr1.3:60427634-60427653 | MS.gene20961:CDS | 40.0% | |
| AAAGCAAAGAAGGCTATCAC+CGG | - | chr1.3:60429735-60429754 | MS.gene20961:intron | 40.0% | |
| AACACCAAGAGAAGAACATG+CGG | - | chr1.3:60427826-60427845 | MS.gene20961:CDS | 40.0% | |
| AACAGTAAAAGACGAACCTG+TGG | - | chr1.3:60427916-60427935 | MS.gene20961:CDS | 40.0% | |
| AACAGTAAAAGGTGAACCTG+TGG | - | chr1.3:60428546-60428565 | MS.gene20961:intron | 40.0% | |
| AACAGTAAAAGTCGAACCTG+TGG | - | chr1.3:60428186-60428205 | MS.gene20961:CDS | 40.0% | |
| AACGGTAAAAGAAGAACCTG+TGG | - | chr1.3:60428096-60428115 | MS.gene20961:CDS | 40.0% | |
| AACTGTAAAAGACGAACCTG+TGG | - | chr1.3:60428051-60428070 | MS.gene20961:CDS | 40.0% | |
| AAGACAGCTACAATTGAAGC+AGG | - | chr1.3:60429432-60429451 | MS.gene20961:intron | 40.0% | |
| AATGATTCCTTCCCTCTTAC+AGG | - | chr1.3:60425615-60425634 | MS.gene20961:CDS | 40.0% | |
| AATTCCCTAGCCAATGAAGA+AGG | - | chr1.3:60426660-60426679 | MS.gene20961:CDS | 40.0% | |
| AATTCCCTAGCCAATGAAGA+TGG | - | chr1.3:60426660-60426679 | MS.gene20961:CDS | 40.0% | |
| AATTGAGGTTGAATCCACCA+AGG | - | chr1.3:60429605-60429624 | MS.gene20961:intron | 40.0% | |
| AGACAAACATGATGACAAGC+CGG | - | chr1.3:60426473-60426492 | MS.gene20961:CDS | 40.0% | |
| AGACAGCTACAATTGAAGCA+GGG | - | chr1.3:60429433-60429452 | MS.gene20961:intron | 40.0% | |
| AGACTAAGAATGACGAAGCA+GGG | - | chr1.3:60428740-60428759 | MS.gene20961:intron | 40.0% | |
| AGAGGAAGAAGTGAAACCAA+AGG | - | chr1.3:60428846-60428865 | MS.gene20961:intron | 40.0% | |
| AGATATTGTGAACCCGGAAA+AGG | - | chr1.3:60426827-60426846 | MS.gene20961:CDS | 40.0% | |
| AGCCTCAATTTCAGTAACCA+CGG | + | chr1.3:60427801-60427820 | None:intergenic | 40.0% | |
| ATCCACTGAATCTGATGTGA+AGG | - | chr1.3:60427271-60427290 | MS.gene20961:CDS | 40.0% | |
| ATCTAATGGCACCATCAAAG+AGG | - | chr1.3:60429116-60429135 | MS.gene20961:intron | 40.0% | |
| ATGATTCCTTCCCTCTTACA+GGG | - | chr1.3:60425616-60425635 | MS.gene20961:CDS | 40.0% | |
| ATGTTTGTCTCCGTCTTCAT+TGG | + | chr1.3:60426463-60426482 | None:intergenic | 40.0% | |
| CAAGCAACCGAAAAAAGTGA+AGG | - | chr1.3:60429093-60429112 | MS.gene20961:intron | 40.0% | |
| GAAACGGTAAAAGAAGAAGC+CGG | - | chr1.3:60428139-60428158 | MS.gene20961:CDS | 40.0% | |
| GAAGATAGAAGATGAGGTGA+AGG | - | chr1.3:60426527-60426546 | MS.gene20961:CDS | 40.0% | |
| GAGCCTACAGAAACAGTAAA+AGG | - | chr1.3:60428535-60428554 | MS.gene20961:intron | 40.0% | |
| GATGAAAACCAAAGTGAACC+AGG | - | chr1.3:60428805-60428824 | MS.gene20961:intron | 40.0% | |
| GATGGCAAGAAAGAAGTTGT+TGG | - | chr1.3:60429261-60429280 | MS.gene20961:intron | 40.0% | |
| GATTTCTTCCACCTTTGTCT+CGG | + | chr1.3:60429463-60429482 | None:intergenic | 40.0% | |
| GCAATTTGTGAAGCAGGAAA+AGG | - | chr1.3:60426404-60426423 | MS.gene20961:CDS | 40.0% | |
| GCCGAAAATAACCAAAGAAC+CGG | - | chr1.3:60427526-60427545 | MS.gene20961:CDS | 40.0% | |
| GCTGCACAAGTTTCACTAAA+TGG | - | chr1.3:60429168-60429187 | MS.gene20961:intron | 40.0% | |
| GCTTGACTTTGTGTATTGTC+CGG | + | chr1.3:60426705-60426724 | None:intergenic | 40.0% | |
| GGAAGTTGGGGAAACTATTA+AGG | - | chr1.3:60429056-60429075 | MS.gene20961:intron | 40.0% | |
| GGATCAACTTCAGTAACTAC+AGG | + | chr1.3:60428295-60428314 | None:intergenic | 40.0% | |
| GGCCAAACTATGGATATGTT+AGG | + | chr1.3:60426201-60426220 | None:intergenic | 40.0% | |
| GGGTTCTTCTTTCACTGTTT+CGG | + | chr1.3:60427690-60427709 | None:intergenic | 40.0% | |
| GTCACTAGTGAAAGCAAAGA+AGG | - | chr1.3:60429725-60429744 | MS.gene20961:intron | 40.0% | |
| GTTCAAAAGAACCCTGTAAG+AGG | + | chr1.3:60425630-60425649 | None:intergenic | 40.0% | |
| TACAAGTAGGTGAGGAAGTT+GGG | - | chr1.3:60429043-60429062 | MS.gene20961:intron | 40.0% | |
| TACAGAAGGAGATGAAGTGA+AGG | - | chr1.3:60426740-60426759 | MS.gene20961:CDS | 40.0% | |
| TAGATAGACTTGTCGTCCTA+TGG | - | chr1.3:60425505-60425524 | MS.gene20961:CDS | 40.0% | |
| TCAGTGCTTAATGTCCTGTT+TGG | - | chr1.3:60425941-60425960 | MS.gene20961:CDS | 40.0% | |
| TCATGCTTCTACTACTCATG+AGG | - | chr1.3:60424935-60424954 | MS.gene20961:CDS | 40.0% | |
| TCTACTTTCTCTGTTTCAGC+TGG | + | chr1.3:60428766-60428785 | None:intergenic | 40.0% | |
| TCTTCTTTCACTGTTTCGGT+AGG | + | chr1.3:60427686-60427705 | None:intergenic | 40.0% | |
| TGAACCTGTTAGAGAAACAC+TGG | - | chr1.3:60429497-60429516 | MS.gene20961:intron | 40.0% | |
| TGAAGTTGAGCCTACAGAAA+AGG | - | chr1.3:60427988-60428007 | MS.gene20961:CDS | 40.0% | |
| TGCAGCAGAAGAGATTGAAA+AGG | - | chr1.3:60426557-60426576 | MS.gene20961:CDS | 40.0% | |
| TGGGGAAACTATTAAGGAAG+TGG | - | chr1.3:60429062-60429081 | MS.gene20961:intron | 40.0% | |
| TGTAGTTGAGCCTACAGAAA+CGG | - | chr1.3:60428033-60428052 | MS.gene20961:CDS | 40.0% | |
| TGTGCATCATCAACTATGTC+AGG | + | chr1.3:60427056-60427075 | None:intergenic | 40.0% | |
| TGTTCCGTTGAATGTTGTTC+TGG | + | chr1.3:60428601-60428620 | None:intergenic | 40.0% | |
| TGTTGCAGATAATCCGAAAG+AGG | - | chr1.3:60427163-60427182 | MS.gene20961:CDS | 40.0% | |
| TTACAAGTAGGTGAGGAAGT+TGG | - | chr1.3:60429042-60429061 | MS.gene20961:intron | 40.0% | |
| TTCACATCAGATTCAGTGGA+TGG | + | chr1.3:60427272-60427291 | None:intergenic | 40.0% | |
| TTCCTTCACATCAGATTCAG+TGG | + | chr1.3:60427276-60427295 | None:intergenic | 40.0% | |
| TTCTATCTTCGATGAAGGAG+TGG | + | chr1.3:60426517-60426536 | None:intergenic | 40.0% | |
| TTGGTTTCTGTAGACTGTTC+TGG | + | chr1.3:60428658-60428677 | None:intergenic | 40.0% | |
| TTGTTTGAATGCTTCTGAGC+TGG | + | chr1.3:60429684-60429703 | None:intergenic | 40.0% | |
| ! | AAAAGTTGTTGTTGCTGCAG+AGG | - | chr1.3:60429314-60429333 | MS.gene20961:intron | 40.0% |
| ! | AGGCTCTACTTCGATGTTTT+TGG | + | chr1.3:60427666-60427685 | None:intergenic | 40.0% |
| ! | ATCTCCATCTTCATTGGCTA+GGG | + | chr1.3:60426880-60426899 | None:intergenic | 40.0% |
| ! | GGTTCGTCTTTTACTGTTTC+TGG | + | chr1.3:60427914-60427933 | None:intergenic | 40.0% |
| ! | TATCTCCATCTTCATTGGCT+AGG | + | chr1.3:60426881-60426900 | None:intergenic | 40.0% |
| ! | TCGTCTTTTACCGTTTCTGT+AGG | + | chr1.3:60428271-60428290 | None:intergenic | 40.0% |
| ! | TGCTGTTGTCTTTTCCTCAT+TGG | + | chr1.3:60427627-60427646 | None:intergenic | 40.0% |
| ! | TTTGGAGGATGGAGATTTTC+CGG | + | chr1.3:60429757-60429776 | None:intergenic | 40.0% |
| ! | TTTTCAGTGGTTTCAGCTTC+TGG | + | chr1.3:60427368-60427387 | None:intergenic | 40.0% |
| !! | AACAACTTTTTCCTCGACAC+TGG | + | chr1.3:60429304-60429323 | None:intergenic | 40.0% |
| !! | CGCATCACTTGATTTTTCAG+TGG | + | chr1.3:60427402-60427421 | None:intergenic | 40.0% |
| !! | CTTGGGTTGATTCTCTTCAT+TGG | + | chr1.3:60427333-60427352 | None:intergenic | 40.0% |
| !! | GGTGTCAGATGATTTTTCAG+TGG | + | chr1.3:60427381-60427400 | None:intergenic | 40.0% |
| !! | GTTGATGATGCACAAAATCC+AGG | - | chr1.3:60427062-60427081 | MS.gene20961:CDS | 40.0% |
| !! | TTCAGAAACAAGTGCCGAAA+AGG | - | chr1.3:60427466-60427485 | MS.gene20961:CDS | 40.0% |
| !! | TTGCTTTTCCATCGTGTCAT+AGG | + | chr1.3:60425553-60425572 | None:intergenic | 40.0% |
| !!! | ACTTTTTTCGGTTGCTTGCT+CGG | + | chr1.3:60429091-60429110 | None:intergenic | 40.0% |
| AAAGAACCCTGTAAGAGGGA+AGG | + | chr1.3:60425625-60425644 | None:intergenic | 45.0% | |
| AACAGAGAAAGTAGAGCCTG+TGG | - | chr1.3:60428771-60428790 | MS.gene20961:intron | 45.0% | |
| AACAGTGAAAGAAGAACCCG+TGG | - | chr1.3:60427691-60427710 | MS.gene20961:CDS | 45.0% | |
| AACGGTAAAAGAAGAAGCCG+GGG | - | chr1.3:60428321-60428340 | MS.gene20961:intron | 45.0% | |
| AACGGTAAAAGAAGAAGCCG+TGG | - | chr1.3:60428321-60428340 | MS.gene20961:intron | 45.0% | |
| ACAAGTAGGTGAGGAAGTTG+GGG | - | chr1.3:60429044-60429063 | MS.gene20961:intron | 45.0% | |
| ACCCGTGGTTACTGAAATTG+AGG | - | chr1.3:60427796-60427815 | MS.gene20961:CDS | 45.0% | |
| ACCTGTGGTTACTGAAGTTG+AGG | - | chr1.3:60427931-60427950 | MS.gene20961:CDS | 45.0% | |
| ACTCCTTCGTCGAATACAGA+AGG | - | chr1.3:60426726-60426745 | MS.gene20961:CDS | 45.0% | |
| AGCTTGAACTTCAGTAGCCA+CGG | + | chr1.3:60428476-60428495 | None:intergenic | 45.0% | |
| AGTCTCAACTTCGGTAACCA+CGG | + | chr1.3:60427711-60427730 | None:intergenic | 45.0% | |
| ATCGGTAGTGCTTACTGAAG+AGG | + | chr1.3:60426350-60426369 | None:intergenic | 45.0% | |
| CACTGAAACTAAGGAGCTCA+TGG | + | chr1.3:60426222-60426241 | None:intergenic | 45.0% | |
| CTTATCGCTGTGTCATGTAC+TGG | + | chr1.3:60427233-60427252 | None:intergenic | 45.0% | |
| GAAGACTGAGGAACAGAATG+AGG | - | chr1.3:60429407-60429426 | MS.gene20961:intron | 45.0% | |
| GACAGAAGGTGATGAGGTTA+AGG | - | chr1.3:60426953-60426972 | MS.gene20961:CDS | 45.0% | |
| GACAGCTACAATTGAAGCAG+GGG | - | chr1.3:60429434-60429453 | MS.gene20961:intron | 45.0% | |
| GACTTGTCGTCCTATGGATA+TGG | - | chr1.3:60425511-60425530 | MS.gene20961:CDS | 45.0% | |
| GAGACTAAGAATGACGAAGC+AGG | - | chr1.3:60428739-60428758 | MS.gene20961:intron | 45.0% | |
| GATGCCAGTGTTTCTCTAAC+AGG | + | chr1.3:60429504-60429523 | None:intergenic | 45.0% | |
| GATTAGGTCCTATGACACGA+TGG | - | chr1.3:60425542-60425561 | MS.gene20961:CDS | 45.0% | |
| GCAGCATTAACCGTTGTGTT+AGG | + | chr1.3:60429153-60429172 | None:intergenic | 45.0% | |
| GCCTCAATTTCAGTAACCAC+GGG | + | chr1.3:60427800-60427819 | None:intergenic | 45.0% | |
| GGAAAAGGACGAAGCTATTG+CGG | - | chr1.3:60426629-60426648 | MS.gene20961:CDS | 45.0% | |
| GGATATGGTCCACATGGATT+AGG | - | chr1.3:60425526-60425545 | MS.gene20961:CDS | 45.0% | |
| GGATCAACTTCAGTAACCAC+AGG | + | chr1.3:60427935-60427954 | None:intergenic | 45.0% | |
| GGTTGACATCAAGAAGACTG+AGG | - | chr1.3:60429395-60429414 | MS.gene20961:intron | 45.0% | |
| GTCATAGGACCTAATCCATG+TGG | + | chr1.3:60425538-60425557 | None:intergenic | 45.0% | |
| TAATGGCACCATCAAAGAGG+AGG | - | chr1.3:60429119-60429138 | MS.gene20961:intron | 45.0% | |
| TCATCCACTTCAGTAACCAC+AGG | + | chr1.3:60428790-60428809 | None:intergenic | 45.0% | |
| TCCATGTGGACCATATCCAT+AGG | + | chr1.3:60425524-60425543 | None:intergenic | 45.0% | |
| TCCTATGGATATGGTCCACA+TGG | - | chr1.3:60425520-60425539 | MS.gene20961:CDS | 45.0% | |
| TCCTCAACTTCAGTAACCAC+AGG | + | chr1.3:60428565-60428584 | None:intergenic | 45.0% | |
| TCTCCTTCTGTATTCGACGA+AGG | + | chr1.3:60426732-60426751 | None:intergenic | 45.0% | |
| TGAGGAGCCAGTGAAAATTG+AGG | - | chr1.3:60429590-60429609 | MS.gene20961:intron | 45.0% | |
| TGATCCTCTGTCTAATGGAG+TGG | - | chr1.3:60428999-60429018 | MS.gene20961:intron | 45.0% | |
| TGCTGCAGAGGATGAAAAGA+AGG | - | chr1.3:60429326-60429345 | MS.gene20961:intron | 45.0% | |
| TGCTTCTGACTCAGAGTTGT+TGG | + | chr1.3:60428956-60428975 | None:intergenic | 45.0% | |
| TGGATGGTGTCTCATCATGA+TGG | + | chr1.3:60427256-60427275 | None:intergenic | 45.0% | |
| TTCAACGGAACAAAGGGAAG+AGG | - | chr1.3:60428609-60428628 | MS.gene20961:intron | 45.0% | |
| TTCTGTATTCGACGAAGGAG+TGG | + | chr1.3:60426727-60426746 | None:intergenic | 45.0% | |
| TTGACCTTAATGTCCCCCTT+TGG | + | chr1.3:60429795-60429814 | None:intergenic | 45.0% | |
| ! | CAATAGCTTCGTCCTTTTCC+GGG | + | chr1.3:60426629-60426648 | None:intergenic | 45.0% |
| ! | CTCGGGCTTTTCTTCCTTTT+CGG | + | chr1.3:60427483-60427502 | None:intergenic | 45.0% |
| ! | GCAATAGCTTCGTCCTTTTC+CGG | + | chr1.3:60426630-60426649 | None:intergenic | 45.0% |
| ! | GTCTCCTTCTTCATTGGCTA+GGG | + | chr1.3:60426667-60426686 | None:intergenic | 45.0% |
| ! | TGGCTGGAGTTTCTTTTGGA+AGG | + | chr1.3:60429659-60429678 | None:intergenic | 45.0% |
| ! | TGTCTCCTTCTTCATTGGCT+AGG | + | chr1.3:60426668-60426687 | None:intergenic | 45.0% |
| !! | GGTTATTTTCGGCTCTTCTG+AGG | + | chr1.3:60427519-60427538 | None:intergenic | 45.0% |
| !!! | CTTTTTTCGGTTGCTTGCTC+GGG | + | chr1.3:60429090-60429109 | None:intergenic | 45.0% |
| !!! | GTTTTTTCTGCAGCAACAGC+AGG | + | chr1.3:60427119-60427138 | None:intergenic | 45.0% |
| AAACCTGTCCTCAGAGCCAA+AGG | - | chr1.3:60429776-60429795 | MS.gene20961:CDS | 50.0% | |
| AACCTCATCACCTTCTGTCG+TGG | + | chr1.3:60426952-60426971 | None:intergenic | 50.0% | |
| AACCTGTCCTCAGAGCCAAA+GGG | - | chr1.3:60429777-60429796 | MS.gene20961:CDS | 50.0% | |
| AAGGTTCCACCGGATTTGCA+GGG | + | chr1.3:60429209-60429228 | None:intergenic | 50.0% | |
| ACATGCGGCTACTGAAGTTG+AGG | - | chr1.3:60427841-60427860 | MS.gene20961:CDS | 50.0% | |
| ACCTCAACTTCAGTAGCTGC+AGG | + | chr1.3:60427890-60427909 | None:intergenic | 50.0% | |
| ACCTGCAGCTACTGAAGTTG+AGG | - | chr1.3:60427886-60427905 | MS.gene20961:CDS | 50.0% | |
| ACTTCAGGAGAAGGTTCCAC+CGG | + | chr1.3:60429219-60429238 | None:intergenic | 50.0% | |
| AGAGCCAAAGGGGGACATTA+AGG | - | chr1.3:60429788-60429807 | MS.gene20961:CDS | 50.0% | |
| AGAGCCTGTGGTTACTGAAG+TGG | - | chr1.3:60428783-60428802 | MS.gene20961:intron | 50.0% | |
| AGCTTCAACTTCAGTAGCCC+CGG | + | chr1.3:60428341-60428360 | None:intergenic | 50.0% | |
| AGGAGCTCATGGCCAAACTA+TGG | + | chr1.3:60426211-60426230 | None:intergenic | 50.0% | |
| ATCTTCAGTCGAGGCCAATG+AGG | - | chr1.3:60427610-60427629 | MS.gene20961:CDS | 50.0% | |
| CAGATGGAGGAATCTGTGCA+AGG | + | chr1.3:60425863-60425882 | None:intergenic | 50.0% | |
| CTCGCTTTCCTCCTCTTTGA+TGG | + | chr1.3:60429130-60429149 | None:intergenic | 50.0% | |
| GACAAGCCTGACAATGCACA+AGG | - | chr1.3:60426909-60426928 | MS.gene20961:CDS | 50.0% | |
| GCTTGACCTTGTGCATTGTC+CGG | + | chr1.3:60426495-60426514 | None:intergenic | 50.0% | |
| GGAAAAGGACGAAGCCATTG+CGG | - | chr1.3:60426419-60426438 | MS.gene20961:CDS | 50.0% | |
| GGAAAGCGAGCCTAACACAA+CGG | - | chr1.3:60429140-60429159 | MS.gene20961:intron | 50.0% | |
| GGCTACTGAAGTTGAGGCTA+CGG | - | chr1.3:60427847-60427866 | MS.gene20961:CDS | 50.0% | |
| GGCTCAACTACAGTAACTGC+AGG | + | chr1.3:60428025-60428044 | None:intergenic | 50.0% | |
| GGTTCACCCTCCAAAAGACT+TGG | - | chr1.3:60428909-60428928 | MS.gene20961:intron | 50.0% | |
| GTAGCCGCATGTTCTTCTCT+TGG | + | chr1.3:60427833-60427852 | None:intergenic | 50.0% | |
| GTCTCAACTTCGGTAACCAC+GGG | + | chr1.3:60427710-60427729 | None:intergenic | 50.0% | |
| TCAGACAACCCCTGCAAATC+CGG | - | chr1.3:60429197-60429216 | MS.gene20961:intron | 50.0% | |
| TCCACTAAGACACTGCATGC+AGG | + | chr1.3:60425051-60425070 | None:intergenic | 50.0% | |
| TCCTCCACTCCATTAGACAG+AGG | + | chr1.3:60429006-60429025 | None:intergenic | 50.0% | |
| TCCTCTGTCTAATGGAGTGG+AGG | - | chr1.3:60429002-60429021 | MS.gene20961:intron | 50.0% | |
| TGAATGCTTCTGAGCTGGCT+TGG | + | chr1.3:60429679-60429698 | None:intergenic | 50.0% | |
| TGGACAGCATCAGATGCTTC+TGG | + | chr1.3:60429354-60429373 | None:intergenic | 50.0% | |
| TGTCCAAGTATCCTCGAGAG+AGG | - | chr1.3:60429368-60429387 | MS.gene20961:intron | 50.0% | |
| TTGCAGCAGGAGAGATCGAA+AGG | - | chr1.3:60426769-60426788 | MS.gene20961:CDS | 50.0% | |
| ! | GGCTTGGCTGGAGTTTCTTT+TGG | + | chr1.3:60429663-60429682 | None:intergenic | 50.0% |
| !! | CTCTGAGGACAGGTTTTTGG+AGG | + | chr1.3:60429772-60429791 | None:intergenic | 50.0% |
| !! | GAGGACAGGTTTTTGGAGGA+TGG | + | chr1.3:60429768-60429787 | None:intergenic | 50.0% |
| !!! | TGGCTCTGAGGACAGGTTTT+TGG | + | chr1.3:60429775-60429794 | None:intergenic | 50.0% |
| ACCTGTCCTCAGAGCCAAAG+GGG | - | chr1.3:60429778-60429797 | MS.gene20961:CDS | 55.0% | |
| ACTCCTTCGTCCACGACAGA+AGG | - | chr1.3:60426939-60426958 | MS.gene20961:CDS | 55.0% | |
| AGGTTCCACCGGATTTGCAG+GGG | + | chr1.3:60429208-60429227 | None:intergenic | 55.0% | |
| AGTATCCTCGAGAGAGGCGA+AGG | - | chr1.3:60429374-60429393 | MS.gene20961:intron | 55.0% | |
| GAAGGTTCCACCGGATTTGC+AGG | + | chr1.3:60429210-60429229 | None:intergenic | 55.0% | |
| GACAAGCCGGACAATGCACA+AGG | - | chr1.3:60426486-60426505 | MS.gene20961:CDS | 55.0% | |
| GCCTGACAATGCACAAGGTC+AGG | - | chr1.3:60426914-60426933 | MS.gene20961:CDS | 55.0% | |
| GCCTGACCTTGTGCATTGTC+AGG | + | chr1.3:60426918-60426937 | None:intergenic | 55.0% | |
| GCCTGCATGCAGTGTCTTAG+TGG | - | chr1.3:60425047-60425066 | MS.gene20961:CDS | 55.0% | |
| GCTTCAACTTCAGCAGCCAC+AGG | + | chr1.3:60428070-60428089 | None:intergenic | 55.0% | |
| GGAGAACACTACCAGTGTCG+AGG | - | chr1.3:60429290-60429309 | MS.gene20961:intron | 55.0% | |
| GGCTCAACTACAGTTGCCAC+AGG | + | chr1.3:60428250-60428269 | None:intergenic | 55.0% | |
| GGCTCAACTTCAGTAGCCAC+AGG | + | chr1.3:60428520-60428539 | None:intergenic | 55.0% | |
| GGCTCAACTTCAGTTGCCAC+TGG | + | chr1.3:60427980-60427999 | None:intergenic | 55.0% | |
| GTCCACGACAGAAGGTGATG+AGG | - | chr1.3:60426947-60426966 | MS.gene20961:CDS | 55.0% | |
| TCACCTTCTGTCGTGGACGA+AGG | + | chr1.3:60426945-60426964 | None:intergenic | 55.0% | |
| TCGCCTCTCTCGAGGATACT+TGG | + | chr1.3:60429374-60429393 | None:intergenic | 55.0% | |
| !! | AATGTCCCCCTTTGGCTCTG+AGG | + | chr1.3:60429787-60429806 | None:intergenic | 55.0% |
| AAAGCCCGAGCTTGAGCCTC+TGG | - | chr1.3:60427493-60427512 | MS.gene20961:CDS | 60.0% | |
| AGCAGGGGAGACCGAGACAA+AGG | - | chr1.3:60429449-60429468 | MS.gene20961:intron | 60.0% | |
| AGGGGAGACCGAGACAAAGG+TGG | - | chr1.3:60429452-60429471 | MS.gene20961:intron | 60.0% | |
| CCTGTCCTCAGAGCCAAAGG+GGG | - | chr1.3:60429779-60429798 | MS.gene20961:CDS | 60.0% | |
| GACAACCCCTGCAAATCCGG+TGG | - | chr1.3:60429200-60429219 | MS.gene20961:intron | 60.0% | |
| GTCAACCTTCGCCTCTCTCG+AGG | + | chr1.3:60429382-60429401 | None:intergenic | 60.0% | |
| GTGAAGGCTGAGCTTGCAGC+AGG | - | chr1.3:60426543-60426562 | MS.gene20961:CDS | 60.0% | |
| TGAGGCCAGAGGCTCAAGCT+CGG | + | chr1.3:60427501-60427520 | None:intergenic | 60.0% | |
| !! | TGCTTCTGAGCTGGCTTGGC+TGG | + | chr1.3:60429675-60429694 | None:intergenic | 60.0% |
| !! | TTCGGCTCTTCTGAGGCCAG+AGG | + | chr1.3:60427512-60427531 | None:intergenic | 60.0% |
| GAGGCCAGAGGCTCAAGCTC+GGG | + | chr1.3:60427500-60427519 | None:intergenic | 65.0% | |
| !! | CCCCCTTTGGCTCTGAGGAC+AGG | + | chr1.3:60429782-60429801 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 60424903 | 60429818 | 60424903 | ID=MS.gene20961 |
| chr1.3 | mRNA | 60424903 | 60429818 | 60424903 | ID=MS.gene20961.t1;Parent=MS.gene20961 |
| chr1.3 | exon | 60429765 | 60429818 | 60429765 | ID=MS.gene20961.t1.exon1;Parent=MS.gene20961.t1 |
| chr1.3 | CDS | 60429765 | 60429818 | 60429765 | ID=cds.MS.gene20961.t1;Parent=MS.gene20961.t1 |
| chr1.3 | exon | 60424903 | 60428316 | 60424903 | ID=MS.gene20961.t1.exon2;Parent=MS.gene20961.t1 |
| chr1.3 | CDS | 60424903 | 60428316 | 60424903 | ID=cds.MS.gene20961.t1;Parent=MS.gene20961.t1 |
| Gene Sequence |
| Protein sequence |
