Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014663.t1 | XP_013461988.1 | 99.4 | 511 | 3 | 0 | 1 | 511 | 1 | 511 | 1.30E-297 | 1031.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014663.t1 | A7SDW5 | 45.1 | 503 | 250 | 8 | 20 | 508 | 35 | 525 | 1.8e-127 | 457.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014663.t1 | G7ZWE0 | 99.4 | 511 | 3 | 0 | 1 | 511 | 1 | 511 | 9.1e-298 | 1031.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene40321 | MS.gene014663 | PPI |
| MS.gene031205 | MS.gene014663 | PPI |
| MS.gene75309 | MS.gene014663 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014663.t1 | MTR_3g110068 | 99.413 | 511 | 3 | 0 | 1 | 511 | 1 | 511 | 0.0 | 1064 |
| MS.gene014663.t1 | MTR_3g109300 | 43.066 | 137 | 45 | 5 | 255 | 378 | 107 | 223 | 1.68e-18 | 89.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014663.t1 | AT5G25757 | 82.677 | 508 | 86 | 2 | 5 | 511 | 8 | 514 | 0.0 | 877 |
| MS.gene014663.t1 | AT5G25754 | 82.677 | 508 | 86 | 2 | 5 | 511 | 8 | 514 | 0.0 | 877 |
Find 104 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTTCAGGTGGTTCTTCA+TGG | 0.182026 | 3.1:-87665617 | MS.gene014663:CDS |
| TAATTACTGCAGTCTCTTTC+AGG | 0.198149 | 3.1:-87665630 | MS.gene014663:CDS |
| GAATCAATGGCTTTGGGATA+TGG | 0.229252 | 3.1:-87665573 | MS.gene014663:CDS |
| AAGTAGATGAACCAACTTTA+AGG | 0.240848 | 3.1:-87661856 | MS.gene014663:intron |
| TACTAGAGGCTCTTCAAAAC+TGG | 0.270914 | 3.1:+87662660 | None:intergenic |
| TAGCAATGTCTTGAAAGTTT+TGG | 0.293530 | 3.1:-87664459 | MS.gene014663:CDS |
| TTCATCAACAAGCCTGCTTT+GGG | 0.303001 | 3.1:+87662816 | None:intergenic |
| GGTGTTTACACCATTGTTAT+TGG | 0.316510 | 3.1:-87664338 | MS.gene014663:CDS |
| CGCTGAAGGGGTAATAAACT+TGG | 0.322037 | 3.1:+87662684 | None:intergenic |
| CTGAGGGTTCATTGTCTCTT+GGG | 0.323751 | 3.1:-87664413 | MS.gene014663:CDS |
| GCTGAGGGTTCATTGTCTCT+TGG | 0.330424 | 3.1:-87664414 | MS.gene014663:CDS |
| ATTACCACCATTTACCACTA+TGG | 0.330766 | 3.1:-87664308 | MS.gene014663:CDS |
| AGCTTCCGAATCAATGGCTT+TGG | 0.332438 | 3.1:-87665580 | MS.gene014663:CDS |
| TTTCATCAACAAGCCTGCTT+TGG | 0.334356 | 3.1:+87662815 | None:intergenic |
| GGAAAGAAGTTTCGTACATT+TGG | 0.342653 | 3.1:+87665822 | None:intergenic |
| GGCAAAACCATAGTGGTAAA+TGG | 0.355256 | 3.1:+87664301 | None:intergenic |
| CTTCTTGCGTCAGGTTGTTA+AGG | 0.370724 | 3.1:-87661211 | MS.gene014663:intron |
| AAGCAACAACAGTTGTTATC+AGG | 0.387793 | 3.1:-87661941 | MS.gene014663:CDS |
| CCTATCTGACCGTTTCTTCA+AGG | 0.387841 | 3.1:-87665795 | MS.gene014663:CDS |
| AGAAACGGTCAGATAGGGTT+TGG | 0.394229 | 3.1:+87665801 | None:intergenic |
| TGAACAAATGTATGCGTTGC+TGG | 0.399391 | 3.1:-87662860 | MS.gene014663:CDS |
| GTTGTTGCTTTGCTTCATAA+AGG | 0.402516 | 3.1:+87661954 | None:intergenic |
| CCTGACTGACTAATATCAAT+AGG | 0.413043 | 3.1:+87664359 | None:intergenic |
| TTCAATATCTGTTCATATTG+TGG | 0.422018 | 3.1:+87662889 | None:intergenic |
| ACTGGATCGGGAACGAAGTT+GGG | 0.422123 | 3.1:+87665905 | None:intergenic |
| CTTGTACATCTTTAAGTACA+AGG | 0.428339 | 3.1:-87662929 | MS.gene014663:CDS |
| TCTCAGTTGCGAGAGAAGTA+TGG | 0.431894 | 3.1:-87662784 | MS.gene014663:CDS |
| CCTATTGATATTAGTCAGTC+AGG | 0.436140 | 3.1:-87664359 | MS.gene014663:CDS |
| TTGGGGTATTTCAGTATGGT+TGG | 0.437805 | 3.1:-87664440 | MS.gene014663:CDS |
| GACTGGATCGGGAACGAAGT+TGG | 0.438328 | 3.1:+87665904 | None:intergenic |
| GAAGTAATCTCCATACCGTT+TGG | 0.439729 | 3.1:+87661230 | None:intergenic |
| GCTTCCGAATCAATGGCTTT+GGG | 0.440244 | 3.1:-87665579 | MS.gene014663:CDS |
| TGCAAAACTTGCAAGTTACA+TGG | 0.442232 | 3.1:-87661879 | MS.gene014663:CDS |
| GTCTTGTTTGCAGCTTGAAA+AGG | 0.447914 | 3.1:-87661044 | MS.gene014663:intron |
| TCTTCAAAACTGGGCGCTGA+AGG | 0.452512 | 3.1:+87662670 | None:intergenic |
| CCTTGAAGAAACGGTCAGAT+AGG | 0.454544 | 3.1:+87665795 | None:intergenic |
| TGGAGATTACTTCTTGCGTC+AGG | 0.454633 | 3.1:-87661220 | MS.gene014663:CDS |
| AAGAAGTTTCGTACATTTGG+TGG | 0.477971 | 3.1:+87665825 | None:intergenic |
| AATATACTTTCAAGAAGGTC+CGG | 0.484004 | 3.1:+87661915 | None:intergenic |
| CAGTATGGTTGGTTTGCTGA+GGG | 0.489529 | 3.1:-87664429 | MS.gene014663:CDS |
| TCTCTTGAAACAGTTCGATC+AGG | 0.490945 | 3.1:-87665471 | MS.gene014663:intron |
| TGACCTGCGGAGCATAAGAT+TGG | 0.496399 | 3.1:+87664280 | None:intergenic |
| TCAGTATGGTTGGTTTGCTG+AGG | 0.497191 | 3.1:-87664430 | MS.gene014663:CDS |
| AAGTCTTGCAACCTTAAAGT+TGG | 0.500427 | 3.1:+87661845 | None:intergenic |
| ATATGCAGCTTCCGAATCAA+TGG | 0.505365 | 3.1:-87665586 | MS.gene014663:CDS |
| CTTCAAAACTGGGCGCTGAA+GGG | 0.514443 | 3.1:+87662671 | None:intergenic |
| ACTCATGCTGTTGATAGTGC+TGG | 0.515009 | 3.1:-87661690 | MS.gene014663:CDS |
| CGAGATGGACAGTATAAAGC+TGG | 0.519050 | 3.1:-87661014 | MS.gene014663:CDS |
| CTCTTGGGTGATTATCACAC+TGG | 0.525249 | 3.1:-87664398 | MS.gene014663:CDS |
| GCTGAAGGGGTAATAAACTT+GGG | 0.527613 | 3.1:+87662685 | None:intergenic |
| TCACACTGGTCTCAAGTGCT+TGG | 0.527814 | 3.1:-87664384 | MS.gene014663:CDS |
| ATAGAAATCCACATCAGCAT+TGG | 0.528493 | 3.1:+87661656 | None:intergenic |
| TTGCCAATCTTATGCTCCGC+AGG | 0.528690 | 3.1:-87664283 | MS.gene014663:intron |
| ATATCCCAAAGCCATTGATT+CGG | 0.529948 | 3.1:+87665575 | None:intergenic |
| CTTGAAGAAACGGTCAGATA+GGG | 0.530479 | 3.1:+87665796 | None:intergenic |
| ATGGTGTGTCCTTGAAGAAA+CGG | 0.530687 | 3.1:+87665786 | None:intergenic |
| CATCAACAAGCCTGCTTTGG+GGG | 0.533539 | 3.1:+87662818 | None:intergenic |
| TAATCTCCATACCGTTTGGA+AGG | 0.533943 | 3.1:+87661234 | None:intergenic |
| AGTAATATCCAATGCTGATG+TGG | 0.534293 | 3.1:-87661664 | MS.gene014663:CDS |
| AACAGTTGTTATCAGGTCTC+CGG | 0.535364 | 3.1:-87661934 | MS.gene014663:CDS |
| TCTCTCTGATGTGACGGTAG+AGG | 0.537475 | 3.1:+87665864 | None:intergenic |
| TACTCGAGCAGGAGAAGGAA+GGG | 0.539087 | 3.1:-87664526 | MS.gene014663:CDS |
| CGAAGTTGGGATCGTAGCCT+AGG | 0.539968 | 3.1:+87665918 | None:intergenic |
| GTATTGAGCGACAGCGTCTA+CGG | 0.542427 | 3.1:+87665757 | None:intergenic |
| TGTTGAATATACTTTCAAGA+AGG | 0.551618 | 3.1:+87661910 | None:intergenic |
| TCTAAACCTTCCAAACGGTA+TGG | 0.552675 | 3.1:-87661240 | MS.gene014663:CDS |
| TCGATTCTCTGACGAAGCGT+AGG | 0.552849 | 3.1:+87665662 | None:intergenic |
| TTCAAAACTGGGCGCTGAAG+GGG | 0.556525 | 3.1:+87662672 | None:intergenic |
| CGTAGCCTAGGTCTTGAGCT+TGG | 0.560532 | 3.1:+87665930 | None:intergenic |
| TTCGTCAGAGAATCGATTCG+TGG | 0.564246 | 3.1:-87665655 | MS.gene014663:CDS |
| GTCTTCTCTACCGTGAGATG+TGG | 0.569636 | 3.1:-87665712 | MS.gene014663:CDS |
| TCAGATACTCGAGCAGGAGA+AGG | 0.571169 | 3.1:-87664531 | MS.gene014663:CDS |
| ACTAGAGGCTCTTCAAAACT+GGG | 0.572995 | 3.1:+87662661 | None:intergenic |
| ATACTCGAGCAGGAGAAGGA+AGG | 0.578832 | 3.1:-87664527 | MS.gene014663:CDS |
| CATTCTTCTCTCTGATGTGA+CGG | 0.584120 | 3.1:+87665858 | None:intergenic |
| GCAGGACACAATTCATGTTG+TGG | 0.584900 | 3.1:-87661265 | MS.gene014663:intron |
| ACAGCGTCTACGGAGGGCCA+TGG | 0.585469 | 3.1:+87665767 | None:intergenic |
| CGTCTCCAAGCTCAAGACCT+AGG | 0.590090 | 3.1:-87665935 | MS.gene014663:CDS |
| ACCTGGTTGTAATTTACTAG+AGG | 0.590170 | 3.1:+87662646 | None:intergenic |
| TAAGATTGGCAAAACCATAG+TGG | 0.590299 | 3.1:+87664294 | None:intergenic |
| AATTATTCAGATACTCGAGC+AGG | 0.592977 | 3.1:-87664537 | MS.gene014663:CDS |
| TTACTGCAGTCTCTTTCAGG+TGG | 0.600442 | 3.1:-87665627 | MS.gene014663:CDS |
| TGAAAAGGTGATCAACGAGA+TGG | 0.601494 | 3.1:-87661029 | MS.gene014663:CDS |
| TGGAGTCTAAACCTTCCAAA+CGG | 0.607048 | 3.1:-87661245 | MS.gene014663:CDS |
| CATATTGTGGAGACTTCTGA+TGG | 0.618356 | 3.1:+87662902 | None:intergenic |
| TAGGAGTGAGACGAGCATAG+AGG | 0.619056 | 3.1:+87665681 | None:intergenic |
| TCGTCAGAGAATCGATTCGT+GGG | 0.622796 | 3.1:-87665654 | MS.gene014663:CDS |
| GAGTGAGACGAGCATAGAGG+TGG | 0.627092 | 3.1:+87665684 | None:intergenic |
| GCCTCTAGTAAATTACAACC+AGG | 0.628196 | 3.1:-87662647 | MS.gene014663:intron |
| GATGGCTATGATTACAATGG+TGG | 0.631082 | 3.1:-87664482 | MS.gene014663:CDS |
| TGAGCGACAGCGTCTACGGA+GGG | 0.640297 | 3.1:+87665761 | None:intergenic |
| GGTGGCGAAACCACATCTCA+CGG | 0.647100 | 3.1:+87665702 | None:intergenic |
| GAGCAATTCACTGCAAACGA+TGG | 0.649501 | 3.1:-87664500 | MS.gene014663:CDS |
| TCATCAACAAGCCTGCTTTG+GGG | 0.650115 | 3.1:+87662817 | None:intergenic |
| AGTGGTAAATGGTGGTAATG+TGG | 0.651980 | 3.1:+87664312 | None:intergenic |
| AATGCAACGATATGATGATG+AGG | 0.655375 | 3.1:-87662746 | MS.gene014663:CDS |
| CTGAAGGGGTAATAAACTTG+GGG | 0.662460 | 3.1:+87662686 | None:intergenic |
| TTGAGCGACAGCGTCTACGG+AGG | 0.671373 | 3.1:+87665760 | None:intergenic |
| GTTTCTTCAAGGACACACCA+TGG | 0.673800 | 3.1:-87665784 | MS.gene014663:CDS |
| AAAACCATAGTGGTAAATGG+TGG | 0.678504 | 3.1:+87664304 | None:intergenic |
| GGTAGAGAAGACAGAAGACA+TGG | 0.688600 | 3.1:+87665723 | None:intergenic |
| ACGGTAGAGGTGAACAACGA+AGG | 0.689816 | 3.1:+87665877 | None:intergenic |
| AACGATGGCTATGATTACAA+TGG | 0.723830 | 3.1:-87664485 | MS.gene014663:CDS |
| AATGTGGCATCCAATAACAA+TGG | 0.744265 | 3.1:+87664328 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAATAAAAAAATTATTGA+GGG | + | chr3.1:87663319-87663338 | None:intergenic | 10.0% |
| !! | AGTAATTTATATATTAAAAG+GGG | + | chr3.1:87664938-87664957 | None:intergenic | 10.0% |
| !! | AGTATTTATTTATGTTAAAA+TGG | - | chr3.1:87663688-87663707 | MS.gene014663:intron | 10.0% |
| !! | TAGAAATAAAAAAATTATTG+AGG | + | chr3.1:87663320-87663339 | None:intergenic | 10.0% |
| !! | TTATAAATTATTACATTACA+TGG | - | chr3.1:87663950-87663969 | MS.gene014663:intron | 10.0% |
| !!! | AAAATTTTTAAATAGTTTCT+GGG | - | chr3.1:87665412-87665431 | MS.gene014663:intron | 10.0% |
| !!! | TAAAATTTTTAAATAGTTTC+TGG | - | chr3.1:87665411-87665430 | MS.gene014663:intron | 10.0% |
| !!! | TCACATTTTAATTTTATTTT+GGG | + | chr3.1:87663501-87663520 | None:intergenic | 10.0% |
| !!! | TTCACATTTTAATTTTATTT+TGG | + | chr3.1:87663502-87663521 | None:intergenic | 10.0% |
| !!! | TTGTTTCATATTTTATAATA+GGG | + | chr3.1:87663478-87663497 | None:intergenic | 10.0% |
| !! | AAAAAAAAAATATTGATCCA+AGG | + | chr3.1:87665161-87665180 | None:intergenic | 15.0% |
| !! | GTAATTTATATATTAAAAGG+GGG | + | chr3.1:87664937-87664956 | None:intergenic | 15.0% |
| !! | TTTAAATAACCATACTTAAT+CGG | + | chr3.1:87663537-87663556 | None:intergenic | 15.0% |
| !!! | AGATTTTATTTTAACATAAG+AGG | + | chr3.1:87663286-87663305 | None:intergenic | 15.0% |
| !!! | AGTATAAATTTTACTTTTCA+AGG | - | chr3.1:87663780-87663799 | MS.gene014663:intron | 15.0% |
| !!! | ATTTTATTTTAACATAAGAG+GGG | + | chr3.1:87663284-87663303 | None:intergenic | 15.0% |
| !!! | CTAATATGTTTTGAATAAAA+GGG | + | chr3.1:87663212-87663231 | None:intergenic | 15.0% |
| !!! | GATTTTATTTTAACATAAGA+GGG | + | chr3.1:87663285-87663304 | None:intergenic | 15.0% |
| !!! | GTATAAATTTTACTTTTCAA+GGG | - | chr3.1:87663781-87663800 | MS.gene014663:intron | 15.0% |
| !!! | GTTGTTTCATATTTTATAAT+AGG | + | chr3.1:87663479-87663498 | None:intergenic | 15.0% |
| !!! | TAATATGTTTTGAATAAAAG+GGG | + | chr3.1:87663211-87663230 | None:intergenic | 15.0% |
| !!! | TCTAATATGTTTTGAATAAA+AGG | + | chr3.1:87663213-87663232 | None:intergenic | 15.0% |
| !!! | TTTATTATCTATTTTATCAG+AGG | - | chr3.1:87661584-87661603 | MS.gene014663:intron | 15.0% |
| !!! | TTTGAAATATAATTCTACAA+TGG | + | chr3.1:87663108-87663127 | None:intergenic | 15.0% |
| !! | AAATAAGGTAAAAACAGTTA+TGG | + | chr3.1:87662189-87662208 | None:intergenic | 20.0% |
| !! | AATAATTTATAACCCATGAA+GGG | + | chr3.1:87663942-87663961 | None:intergenic | 20.0% |
| !! | CAACTAAACTAATTTATTTG+AGG | - | chr3.1:87662827-87662846 | MS.gene014663:CDS | 20.0% |
| !! | CTTGACAAATCTAAATAATA+TGG | + | chr3.1:87665800-87665819 | None:intergenic | 20.0% |
| !! | TAATAATTTATAACCCATGA+AGG | + | chr3.1:87663943-87663962 | None:intergenic | 20.0% |
| !! | TATAGAAATAGCTTATACTT+AGG | - | chr3.1:87662103-87662122 | MS.gene014663:intron | 20.0% |
| !! | TGTTTATGCTAGTATATAAA+GGG | + | chr3.1:87661870-87661889 | None:intergenic | 20.0% |
| !!! | AACTTCAAATTTGAAATGTT+TGG | + | chr3.1:87664412-87664431 | None:intergenic | 20.0% |
| !!! | AATTCAAATTTGAAGCTAAT+TGG | + | chr3.1:87664439-87664458 | None:intergenic | 20.0% |
| !!! | ACTTCAAATTTGAAATGTTT+GGG | + | chr3.1:87664411-87664430 | None:intergenic | 20.0% |
| !!! | AGTCCTTATTTACTTATTAA+GGG | - | chr3.1:87663721-87663740 | MS.gene014663:intron | 20.0% |
| !!! | AGTGTATATTTTAACATAAG+AGG | + | chr3.1:87663183-87663202 | None:intergenic | 20.0% |
| !!! | ATAAGCTATTTCTATAACAA+AGG | + | chr3.1:87662099-87662118 | None:intergenic | 20.0% |
| !!! | ATATTTTACATAAGCACTTA+AGG | - | chr3.1:87662295-87662314 | MS.gene014663:intron | 20.0% |
| !!! | ATTTAGGATTCATTAGAAAT+TGG | - | chr3.1:87663047-87663066 | MS.gene014663:intron | 20.0% |
| !!! | CTCAAATAAATTAGTTTAGT+TGG | + | chr3.1:87662829-87662848 | None:intergenic | 20.0% |
| !!! | GTGTATATTTTAACATAAGA+GGG | + | chr3.1:87663182-87663201 | None:intergenic | 20.0% |
| !!! | TAGTCCTTATTTACTTATTA+AGG | - | chr3.1:87663720-87663739 | MS.gene014663:intron | 20.0% |
| !!! | TGTATATTTTAACATAAGAG+GGG | + | chr3.1:87663181-87663200 | None:intergenic | 20.0% |
| ! | AAACCAGATTTATTTCAATC+TGG | + | chr3.1:87664543-87664562 | None:intergenic | 25.0% |
| ! | AATAAAGCCATTAACATAGA+AGG | + | chr3.1:87664834-87664853 | None:intergenic | 25.0% |
| ! | AGATTGAAATAAATCTGGTT+TGG | - | chr3.1:87664542-87664561 | MS.gene014663:CDS | 25.0% |
| ! | AGTGTATATTTCAACATAAG+AGG | - | chr3.1:87663809-87663828 | MS.gene014663:intron | 25.0% |
| ! | CTTATTTACTTATTAAGGGA+GGG | - | chr3.1:87663725-87663744 | MS.gene014663:intron | 25.0% |
| ! | GTGTATATTTCAACATAAGA+GGG | - | chr3.1:87663810-87663829 | MS.gene014663:intron | 25.0% |
| ! | GTGTTTATGCTAGTATATAA+AGG | + | chr3.1:87661871-87661890 | None:intergenic | 25.0% |
| ! | TAATTAATCTAGCATTTCCT+TGG | - | chr3.1:87665141-87665160 | MS.gene014663:intron | 25.0% |
| ! | TCAAAGAAAAATAGCATTGT+AGG | - | chr3.1:87663372-87663391 | MS.gene014663:intron | 25.0% |
| ! | TGAATTACAATTGAGCATTT+AGG | - | chr3.1:87663031-87663050 | MS.gene014663:intron | 25.0% |
| ! | TGTAATTCAAGCATCTTATA+GGG | - | chr3.1:87663751-87663770 | MS.gene014663:intron | 25.0% |
| ! | TGTAATTTAAGCATCTTTGA+GGG | + | chr3.1:87663151-87663170 | None:intergenic | 25.0% |
| ! | TGTATATTTCAACATAAGAG+GGG | - | chr3.1:87663811-87663830 | MS.gene014663:intron | 25.0% |
| ! | TGTTGAATATACTTTCAAGA+AGG | + | chr3.1:87665055-87665074 | None:intergenic | 25.0% |
| ! | TTATTAAAGCCGATTAAGTA+TGG | - | chr3.1:87663525-87663544 | MS.gene014663:intron | 25.0% |
| ! | TTATTTACTTATTAAGGGAG+GGG | - | chr3.1:87663726-87663745 | MS.gene014663:intron | 25.0% |
| ! | TTCAATATCTGTTCATATTG+TGG | + | chr3.1:87664076-87664095 | None:intergenic | 25.0% |
| ! | TTGTAATTCAAGCATCTTAT+AGG | - | chr3.1:87663750-87663769 | MS.gene014663:intron | 25.0% |
| !! | AACATAATTAAGACCCTTTT+TGG | + | chr3.1:87662332-87662351 | None:intergenic | 25.0% |
| !! | ATGATGTTTTCATTTATTGC+AGG | - | chr3.1:87665679-87665698 | MS.gene014663:CDS | 25.0% |
| !! | GGATTGATTTATTTGAGTTT+GGG | - | chr3.1:87661619-87661638 | MS.gene014663:intron | 25.0% |
| !! | TATCTATTTTATCAGAGGTA+GGG | - | chr3.1:87661589-87661608 | MS.gene014663:intron | 25.0% |
| !! | TGGATTGATTTATTTGAGTT+TGG | - | chr3.1:87661618-87661637 | MS.gene014663:intron | 25.0% |
| !! | TTATCTATTTTATCAGAGGT+AGG | - | chr3.1:87661588-87661607 | MS.gene014663:intron | 25.0% |
| !! | TTTTTGTTCAGTAGAACTTT+TGG | - | chr3.1:87661658-87661677 | MS.gene014663:CDS | 25.0% |
| !!! | AAATTTTACTTTTCAAGGGA+GGG | - | chr3.1:87663785-87663804 | MS.gene014663:intron | 25.0% |
| !!! | AGACAAAAACATTTGACTTT+TGG | - | chr3.1:87665839-87665858 | MS.gene014663:CDS | 25.0% |
| !!! | ATTGTTTTTGCAAATGCTAT+AGG | + | chr3.1:87661759-87661778 | None:intergenic | 25.0% |
| !!! | CTTGTTACCTGATTTTTTAT+GGG | - | chr3.1:87664719-87664738 | MS.gene014663:intron | 25.0% |
| !!! | TAAATTTTACTTTTCAAGGG+AGG | - | chr3.1:87663784-87663803 | MS.gene014663:intron | 25.0% |
| !!! | TATGTTAATGGCTTTATTTG+AGG | - | chr3.1:87664836-87664855 | MS.gene014663:intron | 25.0% |
| !!! | TATTTTTCTTTGAAGTGTGT+TGG | + | chr3.1:87663365-87663384 | None:intergenic | 25.0% |
| !!! | TTGTTACCTGATTTTTTATG+GGG | - | chr3.1:87664720-87664739 | MS.gene014663:intron | 25.0% |
| AAGTAGATGAACCAACTTTA+AGG | - | chr3.1:87665106-87665125 | MS.gene014663:intron | 30.0% | |
| AATATACTTTCAAGAAGGTC+CGG | + | chr3.1:87665050-87665069 | None:intergenic | 30.0% | |
| ACAAAATACCTGTGTTTATG+TGG | + | chr3.1:87665438-87665457 | None:intergenic | 30.0% | |
| ACTTATTTGAGCTTATCCAT+TGG | - | chr3.1:87661919-87661938 | MS.gene014663:CDS | 30.0% | |
| AGTAGTTGAGTATCATTTGA+AGG | - | chr3.1:87663072-87663091 | MS.gene014663:intron | 30.0% | |
| ATTTCTATCTCTGTTCTTTC+TGG | - | chr3.1:87662995-87663014 | MS.gene014663:intron | 30.0% | |
| CATAACTAAATGCAAGCAAT+GGG | + | chr3.1:87665867-87665886 | None:intergenic | 30.0% | |
| CCTCCCTTAATAAGTAAATA+AGG | + | chr3.1:87663727-87663746 | None:intergenic | 30.0% | |
| CTTCCAGATTGAAATAAATC+TGG | - | chr3.1:87664537-87664556 | MS.gene014663:CDS | 30.0% | |
| CTTGTACATCTTTAAGTACA+AGG | - | chr3.1:87664033-87664052 | MS.gene014663:intron | 30.0% | |
| GTAATTTAAGCATCTTTGAG+GGG | + | chr3.1:87663150-87663169 | None:intergenic | 30.0% | |
| GTGTAATTTAAGCATCTTTG+AGG | + | chr3.1:87663152-87663171 | None:intergenic | 30.0% | |
| TATGTACCCCATAAAAAATC+AGG | + | chr3.1:87664729-87664748 | None:intergenic | 30.0% | |
| TATTAATTGTCCTAGCTTGA+AGG | - | chr3.1:87665586-87665605 | MS.gene014663:CDS | 30.0% | |
| TATTTACTTATTAAGGGAGG+GGG | - | chr3.1:87663727-87663746 | MS.gene014663:intron | 30.0% | |
| TCAAATAAGTCCATTCAAAC+AGG | + | chr3.1:87661909-87661928 | None:intergenic | 30.0% | |
| TCATAACTAAATGCAAGCAA+TGG | + | chr3.1:87665868-87665887 | None:intergenic | 30.0% | |
| TCTTCAAAGAGAAAAGGATT+AGG | + | chr3.1:87665367-87665386 | None:intergenic | 30.0% | |
| TGAATCTCTTCAAAGAGAAA+AGG | + | chr3.1:87665373-87665392 | None:intergenic | 30.0% | |
| TTAAAGTTATTTGTTTCCCC+AGG | - | chr3.1:87664957-87664976 | MS.gene014663:intron | 30.0% | |
| TTGGAAAACTTGTGGAAATA+AGG | + | chr3.1:87662204-87662223 | None:intergenic | 30.0% | |
| TTTCTATCTCTGTTCTTTCT+GGG | - | chr3.1:87662996-87663015 | MS.gene014663:intron | 30.0% | |
| ! | AGCAATGTCTTGAAAGTTTT+GGG | - | chr3.1:87662504-87662523 | MS.gene014663:intron | 30.0% |
| ! | AGTCTAAGATAAGATATACC+TGG | + | chr3.1:87664336-87664355 | None:intergenic | 30.0% |
| ! | CCTTATTTACTTATTAAGGG+AGG | - | chr3.1:87663724-87663743 | MS.gene014663:intron | 30.0% |
| ! | TAGCAATGTCTTGAAAGTTT+TGG | - | chr3.1:87662503-87662522 | MS.gene014663:intron | 30.0% |
| ! | TAGTATATAAAGGGCTTGTT+TGG | + | chr3.1:87661861-87661880 | None:intergenic | 30.0% |
| ! | TATATATTAAAAGGGGGCAT+TGG | + | chr3.1:87664931-87664950 | None:intergenic | 30.0% |
| ! | TTCTCTTTATGCAGCTTTTT+GGG | + | chr3.1:87664585-87664604 | None:intergenic | 30.0% |
| ! | TTTCTCTTTATGCAGCTTTT+TGG | + | chr3.1:87664586-87664605 | None:intergenic | 30.0% |
| !! | AATTTTACTTTTCAAGGGAG+GGG | - | chr3.1:87663786-87663805 | MS.gene014663:intron | 30.0% |
| !! | ATGTTTTGAATAAAAGGGGA+GGG | + | chr3.1:87663207-87663226 | None:intergenic | 30.0% |
| !! | GAACTTTTGGAAACAACTTA+TGG | - | chr3.1:87661671-87661690 | MS.gene014663:CDS | 30.0% |
| !! | TATGTTTTGAATAAAAGGGG+AGG | + | chr3.1:87663208-87663227 | None:intergenic | 30.0% |
| !!! | ATATTTTAACATAAGAGGGG+AGG | + | chr3.1:87663178-87663197 | None:intergenic | 30.0% |
| !!! | GCTTGTTACCTGATTTTTTA+TGG | - | chr3.1:87664718-87664737 | MS.gene014663:intron | 30.0% |
| !!! | TATTTTAACATAAGAGGGGA+GGG | + | chr3.1:87663177-87663196 | None:intergenic | 30.0% |
| !!! | TTATTTTAACATAAGAGGGG+AGG | + | chr3.1:87663281-87663300 | None:intergenic | 30.0% |
| AAAACCATAGTGGTAAATGG+TGG | + | chr3.1:87662661-87662680 | None:intergenic | 35.0% | |
| AACGATGGCTATGATTACAA+TGG | - | chr3.1:87662477-87662496 | MS.gene014663:intron | 35.0% | |
| AAGAAGTTTCGTACATTTGG+TGG | + | chr3.1:87661140-87661159 | None:intergenic | 35.0% | |
| AAGCAACAACAGTTGTTATC+AGG | - | chr3.1:87665021-87665040 | MS.gene014663:intron | 35.0% | |
| AAGTCTTGCAACCTTAAAGT+TGG | + | chr3.1:87665120-87665139 | None:intergenic | 35.0% | |
| AATGTGGCATCCAATAACAA+TGG | + | chr3.1:87662637-87662656 | None:intergenic | 35.0% | |
| AATTATTCAGATACTCGAGC+AGG | - | chr3.1:87662425-87662444 | MS.gene014663:intron | 35.0% | |
| ACCAATATTATTTGAGCCTG+TGG | + | chr3.1:87662912-87662931 | None:intergenic | 35.0% | |
| ACCTGGTTGTAATTTACTAG+AGG | + | chr3.1:87664319-87664338 | None:intergenic | 35.0% | |
| AGTAATATCCAATGCTGATG+TGG | - | chr3.1:87665298-87665317 | MS.gene014663:intron | 35.0% | |
| AGTGTATTGTTTATGTCCAC+AGG | - | chr3.1:87662893-87662912 | MS.gene014663:CDS | 35.0% | |
| AGTTTAAACCTGTGTCTTGA+TGG | - | chr3.1:87665460-87665479 | MS.gene014663:intron | 35.0% | |
| ATAAACACTTACGAGACTCT+GGG | - | chr3.1:87661883-87661902 | MS.gene014663:CDS | 35.0% | |
| ATACACTGACAGAATAGAGA+CGG | + | chr3.1:87662880-87662899 | None:intergenic | 35.0% | |
| ATAGAAATCCACATCAGCAT+TGG | + | chr3.1:87665309-87665328 | None:intergenic | 35.0% | |
| ATATTTCAACATAAGAGGGG+AGG | - | chr3.1:87663814-87663833 | MS.gene014663:intron | 35.0% | |
| ATCTAAACAATGACAGCTGA+TGG | + | chr3.1:87664891-87664910 | None:intergenic | 35.0% | |
| ATTACCACCATTTACCACTA+TGG | - | chr3.1:87662654-87662673 | MS.gene014663:CDS | 35.0% | |
| ATTCAAGCATCTTATAGGGA+AGG | - | chr3.1:87663755-87663774 | MS.gene014663:intron | 35.0% | |
| CAGTTATGGAACACATCATA+AGG | + | chr3.1:87662175-87662194 | None:intergenic | 35.0% | |
| CCTATTGATATTAGTCAGTC+AGG | - | chr3.1:87662603-87662622 | MS.gene014663:intron | 35.0% | |
| CCTGACTGACTAATATCAAT+AGG | + | chr3.1:87662606-87662625 | None:intergenic | 35.0% | |
| CTAAATAATATGGACCGCAA+AGG | + | chr3.1:87665790-87665809 | None:intergenic | 35.0% | |
| GCTGTTGTCATAAACTATCT+TGG | + | chr3.1:87662039-87662058 | None:intergenic | 35.0% | |
| GGAAAGAAGTTTCGTACATT+TGG | + | chr3.1:87661143-87661162 | None:intergenic | 35.0% | |
| GGTGTTTACACCATTGTTAT+TGG | - | chr3.1:87662624-87662643 | MS.gene014663:intron | 35.0% | |
| GTAATTCAAGCTTCTCTCAA+GGG | + | chr3.1:87663253-87663272 | None:intergenic | 35.0% | |
| TAAGATTGGCAAAACCATAG+TGG | + | chr3.1:87662671-87662690 | None:intergenic | 35.0% | |
| TAATTACTGCAGTCTCTTTC+AGG | - | chr3.1:87661332-87661351 | MS.gene014663:intron | 35.0% | |
| TATTTCAACATAAGAGGGGA+GGG | - | chr3.1:87663815-87663834 | MS.gene014663:intron | 35.0% | |
| TCCACAGGCTCAAATAATAT+TGG | - | chr3.1:87662908-87662927 | MS.gene014663:CDS | 35.0% | |
| TCTAAACAATGACAGCTGAT+GGG | + | chr3.1:87664890-87664909 | None:intergenic | 35.0% | |
| TGCAAAACTTGCAAGTTACA+TGG | - | chr3.1:87665083-87665102 | MS.gene014663:intron | 35.0% | |
| TGTAATTCAAGCTTCTCTCA+AGG | + | chr3.1:87663254-87663273 | None:intergenic | 35.0% | |
| TGTAGAAAAGGCTACATTTC+AGG | + | chr3.1:87663976-87663995 | None:intergenic | 35.0% | |
| TGTAGTTCAAGCATCTTTGA+GGG | - | chr3.1:87663841-87663860 | MS.gene014663:intron | 35.0% | |
| TTATACTTAGGCGCTTATCA+TGG | - | chr3.1:87662115-87662134 | MS.gene014663:intron | 35.0% | |
| TTCAAGCATCTTATAGGGAA+GGG | - | chr3.1:87663756-87663775 | MS.gene014663:intron | 35.0% | |
| TTCTATCTCTGTTCTTTCTG+GGG | - | chr3.1:87662997-87663016 | MS.gene014663:intron | 35.0% | |
| TTGAGTATCATTTGAAGGTG+TGG | - | chr3.1:87663077-87663096 | MS.gene014663:intron | 35.0% | |
| TTTGCCTTGTATCACTTGAA+TGG | - | chr3.1:87662854-87662873 | MS.gene014663:CDS | 35.0% | |
| ! | AAACTATCTTGGAGTGCTTA+TGG | + | chr3.1:87662028-87662047 | None:intergenic | 35.0% |
| ! | AATGCAACGATATGATGATG+AGG | - | chr3.1:87664216-87664235 | MS.gene014663:intron | 35.0% |
| ! | ATATCCCAAAGCCATTGATT+CGG | + | chr3.1:87661390-87661409 | None:intergenic | 35.0% |
| ! | GCAATGTCTTGAAAGTTTTG+GGG | - | chr3.1:87662505-87662524 | MS.gene014663:intron | 35.0% |
| ! | TATTTGAGTTTGGGTCTGTT+TGG | - | chr3.1:87661628-87661647 | MS.gene014663:intron | 35.0% |
| ! | TCTTAGGCTTGGAATGTTTT+TGG | - | chr3.1:87662363-87662382 | MS.gene014663:intron | 35.0% |
| !! | ATGTTGTCTTTTGCTGTCTT+AGG | - | chr3.1:87662347-87662366 | MS.gene014663:intron | 35.0% |
| !! | ATTTTAACATAAGAGGGGAG+GGG | + | chr3.1:87663176-87663195 | None:intergenic | 35.0% |
| !! | GTAACTTGCAAGTTTTGCAA+GGG | + | chr3.1:87665082-87665101 | None:intergenic | 35.0% |
| !! | GTTGTTTTCATGAGTCAAGT+TGG | + | chr3.1:87662223-87662242 | None:intergenic | 35.0% |
| !! | TGCATTTCCATTTTGATGCT+TGG | - | chr3.1:87665218-87665237 | MS.gene014663:intron | 35.0% |
| !! | TGTAACTTGCAAGTTTTGCA+AGG | + | chr3.1:87665083-87665102 | None:intergenic | 35.0% |
| !!! | AGTTTTGGGGTATTTCAGTA+TGG | - | chr3.1:87662518-87662537 | MS.gene014663:intron | 35.0% |
| AACAGTTGTTATCAGGTCTC+CGG | - | chr3.1:87665028-87665047 | MS.gene014663:intron | 40.0% | |
| ACCAAGAAGCGAGTTAACAA+TGG | + | chr3.1:87665556-87665575 | None:intergenic | 40.0% | |
| ACCATTGTTAACTCGCTTCT+TGG | - | chr3.1:87665552-87665571 | MS.gene014663:CDS | 40.0% | |
| ACTAGAGGCTCTTCAAAACT+GGG | + | chr3.1:87664304-87664323 | None:intergenic | 40.0% | |
| AGAGAAAAGGATTAGGCAAG+AGG | + | chr3.1:87665360-87665379 | None:intergenic | 40.0% | |
| AGGAAGCTGTTCATCCAAAA+AGG | - | chr3.1:87662315-87662334 | MS.gene014663:intron | 40.0% | |
| ATATGCAGCTTCCGAATCAA+TGG | - | chr3.1:87661376-87661395 | MS.gene014663:intron | 40.0% | |
| ATCTTGCACATATCCACACA+TGG | - | chr3.1:87662966-87662985 | MS.gene014663:CDS | 40.0% | |
| ATGGTGTGTCCTTGAAGAAA+CGG | + | chr3.1:87661179-87661198 | None:intergenic | 40.0% | |
| ATTGAAGTCTATACGCATCC+TGG | + | chr3.1:87664978-87664997 | None:intergenic | 40.0% | |
| ATTTCAACATAAGAGGGGAG+GGG | - | chr3.1:87663816-87663835 | MS.gene014663:intron | 40.0% | |
| CACATATCCACACATGGAAT+GGG | - | chr3.1:87662972-87662991 | MS.gene014663:intron | 40.0% | |
| CACTCACTCAAAATGCTCTA+TGG | + | chr3.1:87664382-87664401 | None:intergenic | 40.0% | |
| CATAAACACTTACGAGACTC+TGG | - | chr3.1:87661882-87661901 | MS.gene014663:CDS | 40.0% | |
| CATATTGTGGAGACTTCTGA+TGG | + | chr3.1:87664063-87664082 | None:intergenic | 40.0% | |
| CATCCACGTATCTGTAGAAA+AGG | + | chr3.1:87663988-87664007 | None:intergenic | 40.0% | |
| CATTCTTCTCTCTGATGTGA+CGG | + | chr3.1:87661107-87661126 | None:intergenic | 40.0% | |
| CTCTGAGCCTTCTATGTTAA+TGG | - | chr3.1:87664824-87664843 | MS.gene014663:intron | 40.0% | |
| CTGAAGGGGTAATAAACTTG+GGG | + | chr3.1:87664279-87664298 | None:intergenic | 40.0% | |
| CTTGAAGAAACGGTCAGATA+GGG | + | chr3.1:87661169-87661188 | None:intergenic | 40.0% | |
| GAAGTAATCTCCATACCGTT+TGG | + | chr3.1:87665735-87665754 | None:intergenic | 40.0% | |
| GATGGCTATGATTACAATGG+TGG | - | chr3.1:87662480-87662499 | MS.gene014663:intron | 40.0% | |
| GCAAGCAAGCAATTGATTAG+TGG | + | chr3.1:87662714-87662733 | None:intergenic | 40.0% | |
| GCCTCTAGTAAATTACAACC+AGG | - | chr3.1:87664315-87664334 | MS.gene014663:CDS | 40.0% | |
| GCTGAAGGGGTAATAAACTT+GGG | + | chr3.1:87664280-87664299 | None:intergenic | 40.0% | |
| GGAAGCTGTTCATCCAAAAA+GGG | - | chr3.1:87662316-87662335 | MS.gene014663:intron | 40.0% | |
| GGCAAAACCATAGTGGTAAA+TGG | + | chr3.1:87662664-87662683 | None:intergenic | 40.0% | |
| GTAGTTCAAGCATCTTTGAG+GGG | - | chr3.1:87663842-87663861 | MS.gene014663:intron | 40.0% | |
| GTCACAAGTGTTTATGCCAA+TGG | + | chr3.1:87661938-87661957 | None:intergenic | 40.0% | |
| GTGTAGTTCAAGCATCTTTG+AGG | - | chr3.1:87663840-87663859 | MS.gene014663:intron | 40.0% | |
| TAATCTCCATACCGTTTGGA+AGG | + | chr3.1:87665731-87665750 | None:intergenic | 40.0% | |
| TACTAGAGGCTCTTCAAAAC+TGG | + | chr3.1:87664305-87664324 | None:intergenic | 40.0% | |
| TACTGTTACCATCAAGACAC+AGG | + | chr3.1:87665471-87665490 | None:intergenic | 40.0% | |
| TAGAAATCCCATTCCATGTG+TGG | + | chr3.1:87662982-87663001 | None:intergenic | 40.0% | |
| TATGTGTGCTTTCCCTTCAT+GGG | - | chr3.1:87663927-87663946 | MS.gene014663:intron | 40.0% | |
| TCAAGCATCTTATAGGGAAG+GGG | - | chr3.1:87663757-87663776 | MS.gene014663:intron | 40.0% | |
| TCTAAACCTTCCAAACGGTA+TGG | - | chr3.1:87665722-87665741 | MS.gene014663:CDS | 40.0% | |
| TCTCTTGAAACAGTTCGATC+AGG | - | chr3.1:87661491-87661510 | MS.gene014663:intron | 40.0% | |
| TGAAAAGGTGATCAACGAGA+TGG | - | chr3.1:87665933-87665952 | MS.gene014663:CDS | 40.0% | |
| TGAACAAATGTATGCGTTGC+TGG | - | chr3.1:87664102-87664121 | MS.gene014663:intron | 40.0% | |
| TGGAGTCTAAACCTTCCAAA+CGG | - | chr3.1:87665717-87665736 | MS.gene014663:CDS | 40.0% | |
| TTAGACTCCATCTGTGATCT+TGG | - | chr3.1:87664349-87664368 | MS.gene014663:CDS | 40.0% | |
| TTATGTGTGCTTTCCCTTCA+TGG | - | chr3.1:87663926-87663945 | MS.gene014663:intron | 40.0% | |
| TTCATCAACAAGCCTGCTTT+GGG | + | chr3.1:87664149-87664168 | None:intergenic | 40.0% | |
| TTGAAGTCTATACGCATCCT+GGG | + | chr3.1:87664977-87664996 | None:intergenic | 40.0% | |
| TTGAGAGAACACATGAAGAC+AGG | - | chr3.1:87661963-87661982 | MS.gene014663:CDS | 40.0% | |
| TTTCATCAACAAGCCTGCTT+TGG | + | chr3.1:87664150-87664169 | None:intergenic | 40.0% | |
| ! | AGTGGTAAATGGTGGTAATG+TGG | + | chr3.1:87662653-87662672 | None:intergenic | 40.0% |
| ! | ATTTAAGCATCTTTGAGGGG+AGG | + | chr3.1:87663147-87663166 | None:intergenic | 40.0% |
| ! | TAGCCTTTTCTACAGATACG+TGG | - | chr3.1:87663982-87664001 | MS.gene014663:intron | 40.0% |
| ! | TATCAGAGGTAGGGTTTGTT+TGG | - | chr3.1:87661598-87661617 | MS.gene014663:intron | 40.0% |
| ! | TTGGGGTATTTCAGTATGGT+TGG | - | chr3.1:87662522-87662541 | MS.gene014663:intron | 40.0% |
| ! | TTTAAGCATCTTTGAGGGGA+GGG | + | chr3.1:87663146-87663165 | None:intergenic | 40.0% |
| !! | ATTAAAAGGGGGCATTGGAA+AGG | + | chr3.1:87664926-87664945 | None:intergenic | 40.0% |
| !! | GAATCAATGGCTTTGGGATA+TGG | - | chr3.1:87661389-87661408 | MS.gene014663:intron | 40.0% |
| !! | GAGTCAAGTTGGAAAACTTG+TGG | + | chr3.1:87662212-87662231 | None:intergenic | 40.0% |
| !! | GTCTTGTTTGCAGCTTGAAA+AGG | - | chr3.1:87665918-87665937 | MS.gene014663:CDS | 40.0% |
| !! | TGAACAACGAAGGTTTTGAC+TGG | + | chr3.1:87661078-87661097 | None:intergenic | 40.0% |
| !! | TTATGCAGCTTTTTGGGAGA+TGG | + | chr3.1:87664579-87664598 | None:intergenic | 40.0% |
| !! | TTTCCATTTTGATGCTTGGC+AGG | - | chr3.1:87665222-87665241 | MS.gene014663:intron | 40.0% |
| !!! | AACGAAGGTTTTGACTGGAT+CGG | + | chr3.1:87661073-87661092 | None:intergenic | 40.0% |
| !!! | CTGTTCTTTCTGGGGTTTTT+AGG | - | chr3.1:87663005-87663024 | MS.gene014663:intron | 40.0% |
| ACGGCCATTCAAGTGATACA+AGG | + | chr3.1:87662861-87662880 | None:intergenic | 45.0% | |
| AGAAACGGTCAGATAGGGTT+TGG | + | chr3.1:87661164-87661183 | None:intergenic | 45.0% | |
| AGAAGGCTCAGAGTCAATAG+AGG | + | chr3.1:87664817-87664836 | None:intergenic | 45.0% | |
| AGAGAGAGAGAGAGAGAACA+AGG | + | chr3.1:87664469-87664488 | None:intergenic | 45.0% | |
| AGCTTCCGAATCAATGGCTT+TGG | - | chr3.1:87661382-87661401 | MS.gene014663:intron | 45.0% | |
| AGTCCTGCCAAGCATCAAAA+TGG | + | chr3.1:87665228-87665247 | None:intergenic | 45.0% | |
| ATTCAAGCTTCTCTCAAGGG+AGG | + | chr3.1:87663250-87663269 | None:intergenic | 45.0% | |
| CAAGCTGCAAACAAGACAGA+CGG | + | chr3.1:87665915-87665934 | None:intergenic | 45.0% | |
| CCTATCTGACCGTTTCTTCA+AGG | - | chr3.1:87661167-87661186 | MS.gene014663:intron | 45.0% | |
| CCTTGAAGAAACGGTCAGAT+AGG | + | chr3.1:87661170-87661189 | None:intergenic | 45.0% | |
| CGAGATGGACAGTATAAAGC+TGG | - | chr3.1:87665948-87665967 | MS.gene014663:CDS | 45.0% | |
| CGCTGAAGGGGTAATAAACT+TGG | + | chr3.1:87664281-87664300 | None:intergenic | 45.0% | |
| CTCTTGGGTGATTATCACAC+TGG | - | chr3.1:87662564-87662583 | MS.gene014663:intron | 45.0% | |
| CTGAGGGTTCATTGTCTCTT+GGG | - | chr3.1:87662549-87662568 | MS.gene014663:intron | 45.0% | |
| GAGCAATTCACTGCAAACGA+TGG | - | chr3.1:87662462-87662481 | MS.gene014663:intron | 45.0% | |
| GCACATATCCACACATGGAA+TGG | - | chr3.1:87662971-87662990 | MS.gene014663:intron | 45.0% | |
| GCAGGACACAATTCATGTTG+TGG | - | chr3.1:87665697-87665716 | MS.gene014663:CDS | 45.0% | |
| GCTTCCGAATCAATGGCTTT+GGG | - | chr3.1:87661383-87661402 | MS.gene014663:intron | 45.0% | |
| GGTAGAGAAGACAGAAGACA+TGG | + | chr3.1:87661242-87661261 | None:intergenic | 45.0% | |
| GTTTCTTCAAGGACACACCA+TGG | - | chr3.1:87661178-87661197 | MS.gene014663:intron | 45.0% | |
| TCATCAACAAGCCTGCTTTG+GGG | + | chr3.1:87664148-87664167 | None:intergenic | 45.0% | |
| TCCAGAACCAAGATCACAGA+TGG | + | chr3.1:87664359-87664378 | None:intergenic | 45.0% | |
| TCCATCTGTGATCTTGGTTC+TGG | - | chr3.1:87664355-87664374 | MS.gene014663:CDS | 45.0% | |
| TCTCAGTTGCGAGAGAAGTA+TGG | - | chr3.1:87664178-87664197 | MS.gene014663:intron | 45.0% | |
| TGAAGTCTATACGCATCCTG+GGG | + | chr3.1:87664976-87664995 | None:intergenic | 45.0% | |
| TGGAGATTACTTCTTGCGTC+AGG | - | chr3.1:87665742-87665761 | MS.gene014663:CDS | 45.0% | |
| TGTTAACTCGCTTCTTGGTC+AGG | - | chr3.1:87665557-87665576 | MS.gene014663:CDS | 45.0% | |
| TTACTGCAGTCTCTTTCAGG+TGG | - | chr3.1:87661335-87661354 | MS.gene014663:intron | 45.0% | |
| TTCAAGCTTCTCTCAAGGGA+GGG | + | chr3.1:87663249-87663268 | None:intergenic | 45.0% | |
| TTTCTGGGCCACATAAACAC+AGG | - | chr3.1:87665427-87665446 | MS.gene014663:intron | 45.0% | |
| ! | CTCTTTCAGGTGGTTCTTCA+TGG | - | chr3.1:87661345-87661364 | MS.gene014663:intron | 45.0% |
| ! | CTTCTTGCGTCAGGTTGTTA+AGG | - | chr3.1:87665751-87665770 | MS.gene014663:CDS | 45.0% |
| ! | TGCGTCAGGTTGTTAAGGTA+TGG | - | chr3.1:87665756-87665775 | MS.gene014663:CDS | 45.0% |
| ! | TTAAGCATCTTTGAGGGGAG+GGG | + | chr3.1:87663145-87663164 | None:intergenic | 45.0% |
| ! | TTCAAGCATCTTTGAGGGGA+GGG | - | chr3.1:87663846-87663865 | MS.gene014663:intron | 45.0% |
| !! | ACTCATGCTGTTGATAGTGC+TGG | - | chr3.1:87665272-87665291 | MS.gene014663:intron | 45.0% |
| !! | CAGTATGGTTGGTTTGCTGA+GGG | - | chr3.1:87662533-87662552 | MS.gene014663:intron | 45.0% |
| !! | GTCTTTTGCTGTCTTAGGCT+TGG | - | chr3.1:87662352-87662371 | MS.gene014663:intron | 45.0% |
| !! | TCAGTATGGTTGGTTTGCTG+AGG | - | chr3.1:87662532-87662551 | MS.gene014663:intron | 45.0% |
| !! | TCGTCAGAGAATCGATTCGT+GGG | - | chr3.1:87661308-87661327 | MS.gene014663:intron | 45.0% |
| !! | TTCGTCAGAGAATCGATTCG+TGG | - | chr3.1:87661307-87661326 | MS.gene014663:intron | 45.0% |
| !!! | ACGAAGGTTTTGACTGGATC+GGG | + | chr3.1:87661072-87661091 | None:intergenic | 45.0% |
| !! | AAGTAATTTATATATTAAAA+GGG | + | chr3.1:87664939-87664958 | None:intergenic | 5.0% |
| !! | TAAGTAATTTATATATTAAA+AGG | + | chr3.1:87664940-87664959 | None:intergenic | 5.0% |
| !! | TTGTTTATTAAATATATATT+TGG | - | chr3.1:87665180-87665199 | MS.gene014663:intron | 5.0% |
| !!! | AAGAATTTATATTTTTTAAA+TGG | - | chr3.1:87663638-87663657 | MS.gene014663:intron | 5.0% |
| ACGGTAGAGGTGAACAACGA+AGG | + | chr3.1:87661088-87661107 | None:intergenic | 50.0% | |
| ACTGGATCGGGAACGAAGTT+GGG | + | chr3.1:87661060-87661079 | None:intergenic | 50.0% | |
| AGACTCTGGGCCTGTTTGAA+TGG | - | chr3.1:87661896-87661915 | MS.gene014663:CDS | 50.0% | |
| ATACTCGAGCAGGAGAAGGA+AGG | - | chr3.1:87662435-87662454 | MS.gene014663:intron | 50.0% | |
| CATCAACAAGCCTGCTTTGG+GGG | + | chr3.1:87664147-87664166 | None:intergenic | 50.0% | |
| CTAGCTTGAAGGCGAGAATC+AGG | - | chr3.1:87665597-87665616 | MS.gene014663:CDS | 50.0% | |
| CTGATTCTCGCCTTCAAGCT+AGG | + | chr3.1:87665599-87665618 | None:intergenic | 50.0% | |
| GAAGGCGAGAATCAGGCTTT+AGG | - | chr3.1:87665604-87665623 | MS.gene014663:CDS | 50.0% | |
| GCTGAGGGTTCATTGTCTCT+TGG | - | chr3.1:87662548-87662567 | MS.gene014663:intron | 50.0% | |
| GTATGGTTGCGTCTCCTTTG+CGG | - | chr3.1:87665773-87665792 | MS.gene014663:CDS | 50.0% | |
| GTATTGAGCGACAGCGTCTA+CGG | + | chr3.1:87661208-87661227 | None:intergenic | 50.0% | |
| GTCTTCTCTACCGTGAGATG+TGG | - | chr3.1:87661250-87661269 | MS.gene014663:CDS | 50.0% | |
| TACTCGAGCAGGAGAAGGAA+GGG | - | chr3.1:87662436-87662455 | MS.gene014663:intron | 50.0% | |
| TAGGAGTGAGACGAGCATAG+AGG | + | chr3.1:87661284-87661303 | None:intergenic | 50.0% | |
| TCAAGCTTCTCTCAAGGGAG+GGG | + | chr3.1:87663248-87663267 | None:intergenic | 50.0% | |
| TCAGATACTCGAGCAGGAGA+AGG | - | chr3.1:87662431-87662450 | MS.gene014663:intron | 50.0% | |
| TCGATTCTCTGACGAAGCGT+AGG | + | chr3.1:87661303-87661322 | None:intergenic | 50.0% | |
| TCTCTCTGATGTGACGGTAG+AGG | + | chr3.1:87661101-87661120 | None:intergenic | 50.0% | |
| TGACCTGCGGAGCATAAGAT+TGG | + | chr3.1:87662685-87662704 | None:intergenic | 50.0% | |
| TTAGTGGAAGTCGTGACCTG+CGG | + | chr3.1:87662698-87662717 | None:intergenic | 50.0% | |
| TTGCCAATCTTATGCTCCGC+AGG | - | chr3.1:87662679-87662698 | MS.gene014663:CDS | 50.0% | |
| ! | GTTCAAGCATCTTTGAGGGG+AGG | - | chr3.1:87663845-87663864 | MS.gene014663:intron | 50.0% |
| ! | TCAAGCATCTTTGAGGGGAG+GGG | - | chr3.1:87663847-87663866 | MS.gene014663:intron | 50.0% |
| ! | TCACACTGGTCTCAAGTGCT+TGG | - | chr3.1:87662578-87662597 | MS.gene014663:intron | 50.0% |
| !! | CTTCAAAACTGGGCGCTGAA+GGG | + | chr3.1:87664294-87664313 | None:intergenic | 50.0% |
| !! | GCTTTTTGGGAGATGGAGCT+AGG | + | chr3.1:87664572-87664591 | None:intergenic | 50.0% |
| !! | TCTTCAAAACTGGGCGCTGA+AGG | + | chr3.1:87664295-87664314 | None:intergenic | 50.0% |
| !! | TTCAAAACTGGGCGCTGAAG+GGG | + | chr3.1:87664293-87664312 | None:intergenic | 50.0% |
| CGAAGTTGGGATCGTAGCCT+AGG | + | chr3.1:87661047-87661066 | None:intergenic | 55.0% | |
| CGTAGCCTAGGTCTTGAGCT+TGG | + | chr3.1:87661035-87661054 | None:intergenic | 55.0% | |
| CGTCTCCAAGCTCAAGACCT+AGG | - | chr3.1:87661027-87661046 | MS.gene014663:CDS | 55.0% | |
| GACTGGATCGGGAACGAAGT+TGG | + | chr3.1:87661061-87661080 | None:intergenic | 55.0% | |
| GAGTGAGACGAGCATAGAGG+TGG | + | chr3.1:87661281-87661300 | None:intergenic | 55.0% | |
| GGTGGCGAAACCACATCTCA+CGG | + | chr3.1:87661263-87661282 | None:intergenic | 55.0% | |
| TGAGCGACAGCGTCTACGGA+GGG | + | chr3.1:87661204-87661223 | None:intergenic | 60.0% | |
| TTGAGCGACAGCGTCTACGG+AGG | + | chr3.1:87661205-87661224 | None:intergenic | 60.0% | |
| ACAGCGTCTACGGAGGGCCA+TGG | + | chr3.1:87661198-87661217 | None:intergenic | 65.0% | |
| TCTCGCTCTGCCCCCAAAGC+AGG | - | chr3.1:87664134-87664153 | MS.gene014663:intron | 65.0% | |
| !! | GCTTTGGGGGCAGAGCGAGA+GGG | + | chr3.1:87664134-87664153 | None:intergenic | 65.0% |
| !! | TGCTTTGGGGGCAGAGCGAG+AGG | + | chr3.1:87664135-87664154 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 87661009 | 87665975 | 87661009 | ID=MS.gene014663 |
| chr3.1 | mRNA | 87661009 | 87665975 | 87661009 | ID=MS.gene014663.t1;Parent=MS.gene014663 |
| chr3.1 | exon | 87665472 | 87665975 | 87665472 | ID=MS.gene014663.t1.exon1;Parent=MS.gene014663.t1 |
| chr3.1 | CDS | 87665472 | 87665975 | 87665472 | ID=cds.MS.gene014663.t1;Parent=MS.gene014663.t1 |
| chr3.1 | exon | 87664284 | 87664615 | 87664284 | ID=MS.gene014663.t1.exon2;Parent=MS.gene014663.t1 |
| chr3.1 | CDS | 87664284 | 87664615 | 87664284 | ID=cds.MS.gene014663.t1;Parent=MS.gene014663.t1 |
| chr3.1 | exon | 87662648 | 87662987 | 87662648 | ID=MS.gene014663.t1.exon3;Parent=MS.gene014663.t1 |
| chr3.1 | CDS | 87662648 | 87662987 | 87662648 | ID=cds.MS.gene014663.t1;Parent=MS.gene014663.t1 |
| chr3.1 | exon | 87661857 | 87662005 | 87661857 | ID=MS.gene014663.t1.exon4;Parent=MS.gene014663.t1 |
| chr3.1 | CDS | 87661857 | 87662005 | 87661857 | ID=cds.MS.gene014663.t1;Parent=MS.gene014663.t1 |
| chr3.1 | exon | 87661647 | 87661740 | 87661647 | ID=MS.gene014663.t1.exon5;Parent=MS.gene014663.t1 |
| chr3.1 | CDS | 87661647 | 87661740 | 87661647 | ID=cds.MS.gene014663.t1;Parent=MS.gene014663.t1 |
| chr3.1 | exon | 87661212 | 87661283 | 87661212 | ID=MS.gene014663.t1.exon6;Parent=MS.gene014663.t1 |
| chr3.1 | CDS | 87661212 | 87661283 | 87661212 | ID=cds.MS.gene014663.t1;Parent=MS.gene014663.t1 |
| chr3.1 | exon | 87661009 | 87661053 | 87661009 | ID=MS.gene014663.t1.exon7;Parent=MS.gene014663.t1 |
| chr3.1 | CDS | 87661009 | 87661053 | 87661009 | ID=cds.MS.gene014663.t1;Parent=MS.gene014663.t1 |
| Gene Sequence |
| Protein sequence |
