Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031205.t1 | XP_013461988.1 | 99.4 | 511 | 3 | 0 | 1 | 511 | 1 | 511 | 1.30E-297 | 1031.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031205.t1 | A7SDW5 | 45.1 | 503 | 250 | 8 | 20 | 508 | 35 | 525 | 1.8e-127 | 457.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031205.t1 | G7ZWE0 | 99.4 | 511 | 3 | 0 | 1 | 511 | 1 | 511 | 9.1e-298 | 1031.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene40321 | MS.gene031205 | PPI |
| MS.gene75309 | MS.gene031205 | PPI |
| MS.gene031205 | MS.gene014663 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031205.t1 | MTR_3g110068 | 99.413 | 511 | 3 | 0 | 1 | 511 | 1 | 511 | 0.0 | 1064 |
| MS.gene031205.t1 | MTR_3g109300 | 43.066 | 137 | 45 | 5 | 255 | 378 | 107 | 223 | 1.68e-18 | 89.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031205.t1 | AT5G25757 | 82.677 | 508 | 86 | 2 | 5 | 511 | 8 | 514 | 0.0 | 877 |
| MS.gene031205.t1 | AT5G25754 | 82.677 | 508 | 86 | 2 | 5 | 511 | 8 | 514 | 0.0 | 877 |
Find 0 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAATAAAAAAAATTATTG+AGG | + | 21207:78299-78318 | None:intergenic | 10.0% |
| !! | AGTAATTTATATATTAAAAG+GGG | + | 21207:79920-79939 | None:intergenic | 10.0% |
| !! | AGTATTTATTTATGTTAAAA+TGG | - | 21207:78668-78687 | MS.gene031205:intron | 10.0% |
| !! | GAAATAAAAAAAATTATTGA+GGG | + | 21207:78298-78317 | None:intergenic | 10.0% |
| !! | TTATAAATTATTACATTACA+TGG | - | 21207:78930-78949 | MS.gene031205:intron | 10.0% |
| !!! | AAAATTTTTAAATAGTTTCT+GGG | - | 21207:80394-80413 | MS.gene031205:intron | 10.0% |
| !!! | TAAAATTTTTAAATAGTTTC+TGG | - | 21207:80393-80412 | MS.gene031205:intron | 10.0% |
| !!! | TCACATTTTAATTTTATTTT+GGG | + | 21207:78481-78500 | None:intergenic | 10.0% |
| !!! | TTCACATTTTAATTTTATTT+TGG | + | 21207:78482-78501 | None:intergenic | 10.0% |
| !!! | TTGTTTCATATTTTATAATA+GGG | + | 21207:78458-78477 | None:intergenic | 10.0% |
| !! | AAAAAAAAAATATTGATCCA+AGG | + | 21207:80143-80162 | None:intergenic | 15.0% |
| !! | GTAATTTATATATTAAAAGG+GGG | + | 21207:79919-79938 | None:intergenic | 15.0% |
| !! | TTTAAATAACCATACTTAAT+CGG | + | 21207:78517-78536 | None:intergenic | 15.0% |
| !!! | AGATTTTATTTTAACATAAG+AGG | + | 21207:78265-78284 | None:intergenic | 15.0% |
| !!! | AGTATAAATTTTACTTTTCA+AGG | - | 21207:78760-78779 | MS.gene031205:intron | 15.0% |
| !!! | ATTTTATTTTAACATAAGAG+GGG | + | 21207:78263-78282 | None:intergenic | 15.0% |
| !!! | CTAATATGTTTTGAATAAAA+GGG | + | 21207:78191-78210 | None:intergenic | 15.0% |
| !!! | GATTTTATTTTAACATAAGA+GGG | + | 21207:78264-78283 | None:intergenic | 15.0% |
| !!! | GTATAAATTTTACTTTTCAA+GGG | - | 21207:78761-78780 | MS.gene031205:intron | 15.0% |
| !!! | GTTGTTTCATATTTTATAAT+AGG | + | 21207:78459-78478 | None:intergenic | 15.0% |
| !!! | TAATATGTTTTGAATAAAAG+GGG | + | 21207:78190-78209 | None:intergenic | 15.0% |
| !!! | TCTAATATGTTTTGAATAAA+AGG | + | 21207:78192-78211 | None:intergenic | 15.0% |
| !!! | TTTATTATCTATTTTATCAG+AGG | - | 21207:76553-76572 | MS.gene031205:intron | 15.0% |
| !!! | TTTGAAATATAATTCTACAA+TGG | + | 21207:78087-78106 | None:intergenic | 15.0% |
| !! | AAATAAGGTAAAAACAGTTA+TGG | + | 21207:77168-77187 | None:intergenic | 20.0% |
| !! | AATAATTTATAACCCATGAA+GGG | + | 21207:78922-78941 | None:intergenic | 20.0% |
| !! | CAACTAAACTAATTTATTTG+AGG | - | 21207:77806-77825 | MS.gene031205:CDS | 20.0% |
| !! | CTTGACAAATCTAAATAATA+TGG | + | 21207:80782-80801 | None:intergenic | 20.0% |
| !! | TAATAATTTATAACCCATGA+AGG | + | 21207:78923-78942 | None:intergenic | 20.0% |
| !! | TATAGAAATAGCTTATACTT+AGG | - | 21207:77082-77101 | MS.gene031205:intron | 20.0% |
| !! | TGTTTATGCTAGTATATAAA+GGG | + | 21207:76849-76868 | None:intergenic | 20.0% |
| !!! | AACTTCAAATTTGAAATGTT+TGG | + | 21207:79392-79411 | None:intergenic | 20.0% |
| !!! | AATTCAAATTTGAAGCTAAT+TGG | + | 21207:79419-79438 | None:intergenic | 20.0% |
| !!! | ACTTCAAATTTGAAATGTTT+GGG | + | 21207:79391-79410 | None:intergenic | 20.0% |
| !!! | AGTCCTTATTTACTTATTAA+GGG | - | 21207:78701-78720 | MS.gene031205:intron | 20.0% |
| !!! | AGTGTATATTTTAACATAAG+AGG | + | 21207:78162-78181 | None:intergenic | 20.0% |
| !!! | ATAAGCTATTTCTATAACAA+AGG | + | 21207:77078-77097 | None:intergenic | 20.0% |
| !!! | ATATTTTACATAAGCACTTA+AGG | - | 21207:77274-77293 | MS.gene031205:intron | 20.0% |
| !!! | ATTTAGGATTCATTAGAAAT+TGG | - | 21207:78026-78045 | MS.gene031205:intron | 20.0% |
| !!! | CTCAAATAAATTAGTTTAGT+TGG | + | 21207:77808-77827 | None:intergenic | 20.0% |
| !!! | GTGTATATTTTAACATAAGA+GGG | + | 21207:78161-78180 | None:intergenic | 20.0% |
| !!! | TAGTCCTTATTTACTTATTA+AGG | - | 21207:78700-78719 | MS.gene031205:intron | 20.0% |
| !!! | TGTATATTTTAACATAAGAG+GGG | + | 21207:78160-78179 | None:intergenic | 20.0% |
| ! | AAACCAGATTTATTTCAATC+TGG | + | 21207:79527-79546 | None:intergenic | 25.0% |
| ! | AATAAAGCCATTAACATAGA+AGG | + | 21207:79816-79835 | None:intergenic | 25.0% |
| ! | AGATTGAAATAAATCTGGTT+TGG | - | 21207:79526-79545 | MS.gene031205:CDS | 25.0% |
| ! | AGTGTATATTTCAACATAAG+AGG | - | 21207:78789-78808 | MS.gene031205:intron | 25.0% |
| ! | CTTATTTACTTATTAAGGGA+GGG | - | 21207:78705-78724 | MS.gene031205:intron | 25.0% |
| ! | GTGTATATTTCAACATAAGA+GGG | - | 21207:78790-78809 | MS.gene031205:intron | 25.0% |
| ! | GTGTTTATGCTAGTATATAA+AGG | + | 21207:76850-76869 | None:intergenic | 25.0% |
| ! | TAATTAATCTAGCATTTCCT+TGG | - | 21207:80123-80142 | MS.gene031205:intron | 25.0% |
| ! | TCAAAGAAAAATAGCATTGT+AGG | - | 21207:78352-78371 | MS.gene031205:intron | 25.0% |
| ! | TGAATTACAATTGAGCATTT+AGG | - | 21207:78010-78029 | MS.gene031205:intron | 25.0% |
| ! | TGTAATTCAAGCATCTTATA+GGG | - | 21207:78731-78750 | MS.gene031205:intron | 25.0% |
| ! | TGTAATTTAAGCATCTTTGA+GGG | + | 21207:78130-78149 | None:intergenic | 25.0% |
| ! | TGTATATTTCAACATAAGAG+GGG | - | 21207:78791-78810 | MS.gene031205:intron | 25.0% |
| ! | TGTTGAATATACTTTCAAGA+AGG | + | 21207:80037-80056 | None:intergenic | 25.0% |
| ! | TTATTAAAGCCGATTAAGTA+TGG | - | 21207:78505-78524 | MS.gene031205:intron | 25.0% |
| ! | TTATTTACTTATTAAGGGAG+GGG | - | 21207:78706-78725 | MS.gene031205:intron | 25.0% |
| ! | TTCAATATCTGTTCATATTG+TGG | + | 21207:79056-79075 | None:intergenic | 25.0% |
| ! | TTGTAATTCAAGCATCTTAT+AGG | - | 21207:78730-78749 | MS.gene031205:intron | 25.0% |
| !! | AACATAATTAAGACCCTTTT+TGG | + | 21207:77311-77330 | None:intergenic | 25.0% |
| !! | ATGATGTTTTCATTTATTGC+AGG | - | 21207:80661-80680 | MS.gene031205:CDS | 25.0% |
| !! | ATTTTGTTGAGTTTAAACCT+GGG | - | 21207:80433-80452 | MS.gene031205:intron | 25.0% |
| !! | GGATTGATTTATTTGAGTTT+GGG | - | 21207:76588-76607 | MS.gene031205:intron | 25.0% |
| !! | TATCTATTTTATCAGAGGTA+GGG | - | 21207:76558-76577 | MS.gene031205:intron | 25.0% |
| !! | TATTTTGTTGAGTTTAAACC+TGG | - | 21207:80432-80451 | MS.gene031205:intron | 25.0% |
| !! | TGGATTGATTTATTTGAGTT+TGG | - | 21207:76587-76606 | MS.gene031205:intron | 25.0% |
| !! | TTATCTATTTTATCAGAGGT+AGG | - | 21207:76557-76576 | MS.gene031205:intron | 25.0% |
| !! | TTTTTGTTCAGTAGAACTTT+TGG | - | 21207:76627-76646 | MS.gene031205:CDS | 25.0% |
| !!! | AAATTTTACTTTTCAAGGGA+GGG | - | 21207:78765-78784 | MS.gene031205:intron | 25.0% |
| !!! | AGACAAAAACATTTGACTTT+TGG | - | 21207:80821-80840 | MS.gene031205:CDS | 25.0% |
| !!! | ATTGTTTTTGCAAATGCTAT+AGG | + | 21207:76728-76747 | None:intergenic | 25.0% |
| !!! | CTTGTTACCTGATTTTTTAT+GGG | - | 21207:79701-79720 | MS.gene031205:intron | 25.0% |
| !!! | TAAATTTTACTTTTCAAGGG+AGG | - | 21207:78764-78783 | MS.gene031205:intron | 25.0% |
| !!! | TATGTTAATGGCTTTATTTG+AGG | - | 21207:79818-79837 | MS.gene031205:intron | 25.0% |
| !!! | TATTTTTCTTTGAAGTGTGT+TGG | + | 21207:78345-78364 | None:intergenic | 25.0% |
| !!! | TTGTTACCTGATTTTTTATG+GGG | - | 21207:79702-79721 | MS.gene031205:intron | 25.0% |
| AAGTAGATGAACCAACTTTA+AGG | - | 21207:80088-80107 | MS.gene031205:intron | 30.0% | |
| AATATACTTTCAAGAAGGTC+CGG | + | 21207:80032-80051 | None:intergenic | 30.0% | |
| ACAAAATACCTGTGTTTATG+TGG | + | 21207:80420-80439 | None:intergenic | 30.0% | |
| ACTTATTTGAGCTTATCCAT+TGG | - | 21207:76898-76917 | MS.gene031205:CDS | 30.0% | |
| AGTAGTTGAGTATCATTTGA+AGG | - | 21207:78051-78070 | MS.gene031205:intron | 30.0% | |
| ATTTCTATCTCTGTTCTTTC+TGG | - | 21207:77974-77993 | MS.gene031205:intron | 30.0% | |
| CCTCCCTTAATAAGTAAATA+AGG | + | 21207:78707-78726 | None:intergenic | 30.0% | |
| CTTCCAGATTGAAATAAATC+TGG | - | 21207:79521-79540 | MS.gene031205:CDS | 30.0% | |
| CTTGTACATCTTTAAGTACA+AGG | - | 21207:79013-79032 | MS.gene031205:intron | 30.0% | |
| GTAATTTAAGCATCTTTGAG+GGG | + | 21207:78129-78148 | None:intergenic | 30.0% | |
| GTGTAATTTAAGCATCTTTG+AGG | + | 21207:78131-78150 | None:intergenic | 30.0% | |
| TATGTACCCCATAAAAAATC+AGG | + | 21207:79711-79730 | None:intergenic | 30.0% | |
| TATTAATTGTCCTAGCTTGA+AGG | - | 21207:80568-80587 | MS.gene031205:CDS | 30.0% | |
| TATTTACTTATTAAGGGAGG+GGG | - | 21207:78707-78726 | MS.gene031205:intron | 30.0% | |
| TCAAATAAGTCCATTCAAAC+AGG | + | 21207:76888-76907 | None:intergenic | 30.0% | |
| TCTTCAAAGAGAAAAGGATT+AGG | + | 21207:80349-80368 | None:intergenic | 30.0% | |
| TGAATCTCTTCAAAGAGAAA+AGG | + | 21207:80355-80374 | None:intergenic | 30.0% | |
| TTAAAGTTATTTGTTTCCCC+AGG | - | 21207:79939-79958 | MS.gene031205:intron | 30.0% | |
| TTGGAAAACTTGTGGAAATA+AGG | + | 21207:77183-77202 | None:intergenic | 30.0% | |
| TTTCTATCTCTGTTCTTTCT+GGG | - | 21207:77975-77994 | MS.gene031205:intron | 30.0% | |
| ! | AGCAATGTCTTGAAAGTTTT+GGG | - | 21207:77483-77502 | MS.gene031205:intron | 30.0% |
| ! | AGTCTAAGATAAGATATACC+TGG | + | 21207:79316-79335 | None:intergenic | 30.0% |
| ! | CCTTATTTACTTATTAAGGG+AGG | - | 21207:78704-78723 | MS.gene031205:intron | 30.0% |
| ! | TAGCAATGTCTTGAAAGTTT+TGG | - | 21207:77482-77501 | MS.gene031205:intron | 30.0% |
| ! | TAGTATATAAAGGGCTTGTT+TGG | + | 21207:76840-76859 | None:intergenic | 30.0% |
| ! | TATATATTAAAAGGGGGCAT+TGG | + | 21207:79913-79932 | None:intergenic | 30.0% |
| !! | AATTTTACTTTTCAAGGGAG+GGG | - | 21207:78766-78785 | MS.gene031205:intron | 30.0% |
| !! | ATGTTTTGAATAAAAGGGGA+GGG | + | 21207:78186-78205 | None:intergenic | 30.0% |
| !! | GAACTTTTGGAAACAACTTA+TGG | - | 21207:76640-76659 | MS.gene031205:CDS | 30.0% |
| !! | TATGTTTTGAATAAAAGGGG+AGG | + | 21207:78187-78206 | None:intergenic | 30.0% |
| !!! | ATATTTTAACATAAGAGGGG+AGG | + | 21207:78157-78176 | None:intergenic | 30.0% |
| !!! | GCTTGTTACCTGATTTTTTA+TGG | - | 21207:79700-79719 | MS.gene031205:intron | 30.0% |
| !!! | TATTTTAACATAAGAGGGGA+GGG | + | 21207:78156-78175 | None:intergenic | 30.0% |
| !!! | TTATTTTAACATAAGAGGGG+AGG | + | 21207:78260-78279 | None:intergenic | 30.0% |
| AAAACCATAGTGGTAAATGG+TGG | + | 21207:77640-77659 | None:intergenic | 35.0% | |
| AACGATGGCTATGATTACAA+TGG | - | 21207:77456-77475 | MS.gene031205:intron | 35.0% | |
| AAGAAGTTTCGTACATTTGG+TGG | + | 21207:76108-76127 | None:intergenic | 35.0% | |
| AAGCAACAACAGTTGTTATC+AGG | - | 21207:80003-80022 | MS.gene031205:intron | 35.0% | |
| AAGTCTTGCAACCTTAAAGT+TGG | + | 21207:80102-80121 | None:intergenic | 35.0% | |
| AATGTGGCATCCAATAACAA+TGG | + | 21207:77616-77635 | None:intergenic | 35.0% | |
| AATTATTCAGATACTCGAGC+AGG | - | 21207:77404-77423 | MS.gene031205:intron | 35.0% | |
| ACCAATATTATTTGAGCCTG+TGG | + | 21207:77891-77910 | None:intergenic | 35.0% | |
| ACCTGGTTGTAATTTACTAG+AGG | + | 21207:79299-79318 | None:intergenic | 35.0% | |
| AGTAATATCCAATGCTGATG+TGG | - | 21207:80280-80299 | MS.gene031205:intron | 35.0% | |
| AGTGTATTGTTTATGTCCAC+AGG | - | 21207:77872-77891 | MS.gene031205:CDS | 35.0% | |
| ATAAACACTTACGAGACTCT+GGG | - | 21207:76862-76881 | MS.gene031205:CDS | 35.0% | |
| ATACACTGACAGAATAGAGA+CGG | + | 21207:77859-77878 | None:intergenic | 35.0% | |
| ATAGAAATCCACATCAGCAT+TGG | + | 21207:80291-80310 | None:intergenic | 35.0% | |
| ATATTTCAACATAAGAGGGG+AGG | - | 21207:78794-78813 | MS.gene031205:intron | 35.0% | |
| ATCTAAACAATGACAGCTGA+TGG | + | 21207:79873-79892 | None:intergenic | 35.0% | |
| ATTACCACCATTTACCACTA+TGG | - | 21207:77633-77652 | MS.gene031205:CDS | 35.0% | |
| ATTCAAGCATCTTATAGGGA+AGG | - | 21207:78735-78754 | MS.gene031205:intron | 35.0% | |
| CAGTTATGGAACACATCATA+AGG | + | 21207:77154-77173 | None:intergenic | 35.0% | |
| CCTATTGATATTAGTCAGTC+AGG | - | 21207:77582-77601 | MS.gene031205:intron | 35.0% | |
| CCTGACTGACTAATATCAAT+AGG | + | 21207:77585-77604 | None:intergenic | 35.0% | |
| CGTAACTAAATGCAAGCAAT+GGG | + | 21207:80849-80868 | None:intergenic | 35.0% | |
| CTAAATAATATGGACCGCAA+AGG | + | 21207:80772-80791 | None:intergenic | 35.0% | |
| GCTGTTGTCATAAACTATCT+TGG | + | 21207:77018-77037 | None:intergenic | 35.0% | |
| GGAAAGAAGTTTCGTACATT+TGG | + | 21207:76111-76130 | None:intergenic | 35.0% | |
| GGTGTTTACACCATTGTTAT+TGG | - | 21207:77603-77622 | MS.gene031205:intron | 35.0% | |
| GTAATTCAAGCTTCTCTCAA+GGG | + | 21207:78232-78251 | None:intergenic | 35.0% | |
| TAAGATTGGCAAAACCATAG+TGG | + | 21207:77650-77669 | None:intergenic | 35.0% | |
| TAATTACTGCAGTCTCTTTC+AGG | - | 21207:76300-76319 | MS.gene031205:intron | 35.0% | |
| TATTTCAACATAAGAGGGGA+GGG | - | 21207:78795-78814 | MS.gene031205:intron | 35.0% | |
| TCCACAGGCTCAAATAATAT+TGG | - | 21207:77887-77906 | MS.gene031205:CDS | 35.0% | |
| TCGTAACTAAATGCAAGCAA+TGG | + | 21207:80850-80869 | None:intergenic | 35.0% | |
| TCTAAACAATGACAGCTGAT+GGG | + | 21207:79872-79891 | None:intergenic | 35.0% | |
| TGCAAAACTTGCAAGTTACA+TGG | - | 21207:80065-80084 | MS.gene031205:intron | 35.0% | |
| TGTAATTCAAGCTTCTCTCA+AGG | + | 21207:78233-78252 | None:intergenic | 35.0% | |
| TGTAGAAAAGGCTACATTTC+AGG | + | 21207:78956-78975 | None:intergenic | 35.0% | |
| TGTAGTTCAAGCATCTTTGA+GGG | - | 21207:78821-78840 | MS.gene031205:intron | 35.0% | |
| TTATACTTAGGCGCTTATCA+TGG | - | 21207:77094-77113 | MS.gene031205:intron | 35.0% | |
| TTCAAGCATCTTATAGGGAA+GGG | - | 21207:78736-78755 | MS.gene031205:intron | 35.0% | |
| TTCTATCTCTGTTCTTTCTG+GGG | - | 21207:77976-77995 | MS.gene031205:intron | 35.0% | |
| TTGAGTATCATTTGAAGGTG+TGG | - | 21207:78056-78075 | MS.gene031205:intron | 35.0% | |
| TTTGCCTTGTATCACTTGAA+TGG | - | 21207:77833-77852 | MS.gene031205:CDS | 35.0% | |
| ! | AAACTATCTTGGAGTGCTTA+TGG | + | 21207:77007-77026 | None:intergenic | 35.0% |
| ! | AATGCAACGATATGATGATG+AGG | - | 21207:79196-79215 | MS.gene031205:intron | 35.0% |
| ! | ATATCCCAAAGCCATTGATT+CGG | + | 21207:76358-76377 | None:intergenic | 35.0% |
| ! | CTCTCTTTATGCAGCTTTTT+GGG | + | 21207:79569-79588 | None:intergenic | 35.0% |
| ! | GCAATGTCTTGAAAGTTTTG+GGG | - | 21207:77484-77503 | MS.gene031205:intron | 35.0% |
| ! | TATTTGAGTTTGGGTCTGTT+TGG | - | 21207:76597-76616 | MS.gene031205:intron | 35.0% |
| ! | TCTCTCTTTATGCAGCTTTT+TGG | + | 21207:79570-79589 | None:intergenic | 35.0% |
| ! | TCTTAGGCTTGGAATGTTTT+TGG | - | 21207:77342-77361 | MS.gene031205:intron | 35.0% |
| !! | ATGTTGTCTTTTGCTGTCTT+AGG | - | 21207:77326-77345 | MS.gene031205:intron | 35.0% |
| !! | ATTTTAACATAAGAGGGGAG+GGG | + | 21207:78155-78174 | None:intergenic | 35.0% |
| !! | GTAACTTGCAAGTTTTGCAA+GGG | + | 21207:80064-80083 | None:intergenic | 35.0% |
| !! | GTTGTTGCTTTGCTTCATAA+AGG | + | 21207:79993-80012 | None:intergenic | 35.0% |
| !! | GTTGTTTTCATGAGTCAAGT+TGG | + | 21207:77202-77221 | None:intergenic | 35.0% |
| !! | TGCATTTCCATTTTGATGCT+TGG | - | 21207:80200-80219 | MS.gene031205:intron | 35.0% |
| !! | TGTAACTTGCAAGTTTTGCA+AGG | + | 21207:80065-80084 | None:intergenic | 35.0% |
| !!! | AGTTTTGGGGTATTTCAGTA+TGG | - | 21207:77497-77516 | MS.gene031205:intron | 35.0% |
| AACAGTTGTTATCAGGTCTC+CGG | - | 21207:80010-80029 | MS.gene031205:intron | 40.0% | |
| ACCAAGAAGCGAGTTAACAA+TGG | + | 21207:80538-80557 | None:intergenic | 40.0% | |
| ACCATTGTTAACTCGCTTCT+TGG | - | 21207:80534-80553 | MS.gene031205:CDS | 40.0% | |
| ACTAGAGGCTCTTCAAAACT+GGG | + | 21207:79284-79303 | None:intergenic | 40.0% | |
| AGAGAAAAGGATTAGGCAAG+AGG | + | 21207:80342-80361 | None:intergenic | 40.0% | |
| AGGAAGCTGTTCATCCAAAA+AGG | - | 21207:77294-77313 | MS.gene031205:intron | 40.0% | |
| AGTTTAAACCTGGGTCTTGA+TGG | - | 21207:80442-80461 | MS.gene031205:intron | 40.0% | |
| ATATGCAGCTTCCGAATCAA+TGG | - | 21207:76344-76363 | MS.gene031205:intron | 40.0% | |
| ATCTTGCACATATCCACACA+TGG | - | 21207:77945-77964 | MS.gene031205:intron | 40.0% | |
| ATGGTGTGTCCTTGAAGAAA+CGG | + | 21207:76147-76166 | None:intergenic | 40.0% | |
| ATTTCAACATAAGAGGGGAG+GGG | - | 21207:78796-78815 | MS.gene031205:intron | 40.0% | |
| CACATATCCACACATGGAAT+GGG | - | 21207:77951-77970 | MS.gene031205:intron | 40.0% | |
| CACTCACTCAAAATGCTCTA+TGG | + | 21207:79362-79381 | None:intergenic | 40.0% | |
| CATAAACACTTACGAGACTC+TGG | - | 21207:76861-76880 | MS.gene031205:CDS | 40.0% | |
| CATATTGTGGAGACTTCTGA+TGG | + | 21207:79043-79062 | None:intergenic | 40.0% | |
| CATCCACGTATCTGTAGAAA+AGG | + | 21207:78968-78987 | None:intergenic | 40.0% | |
| CATTCTTCTCTCTGATGTGA+CGG | + | 21207:76075-76094 | None:intergenic | 40.0% | |
| CTCTGAGCCTTCTATGTTAA+TGG | - | 21207:79806-79825 | MS.gene031205:intron | 40.0% | |
| CTGAAGGGGTAATAAACTTG+GGG | + | 21207:79259-79278 | None:intergenic | 40.0% | |
| CTTGAAGAAACGGTCAGATA+GGG | + | 21207:76137-76156 | None:intergenic | 40.0% | |
| GAAGTAATCTCCATACCGTT+TGG | + | 21207:80717-80736 | None:intergenic | 40.0% | |
| GATGGCTATGATTACAATGG+TGG | - | 21207:77459-77478 | MS.gene031205:intron | 40.0% | |
| GCAAGCAAGCAATTGATTAG+TGG | + | 21207:77693-77712 | None:intergenic | 40.0% | |
| GCCTCTAGTAAATTACAACC+AGG | - | 21207:79295-79314 | MS.gene031205:CDS | 40.0% | |
| GCTGAAGGGGTAATAAACTT+GGG | + | 21207:79260-79279 | None:intergenic | 40.0% | |
| GGAAGCTGTTCATCCAAAAA+GGG | - | 21207:77295-77314 | MS.gene031205:intron | 40.0% | |
| GGCAAAACCATAGTGGTAAA+TGG | + | 21207:77643-77662 | None:intergenic | 40.0% | |
| GTAGTTCAAGCATCTTTGAG+GGG | - | 21207:78822-78841 | MS.gene031205:intron | 40.0% | |
| GTCACAAGTGTTTATGCCAA+TGG | + | 21207:76917-76936 | None:intergenic | 40.0% | |
| GTGTAGTTCAAGCATCTTTG+AGG | - | 21207:78820-78839 | MS.gene031205:intron | 40.0% | |
| TAATCTCCATACCGTTTGGA+AGG | + | 21207:80713-80732 | None:intergenic | 40.0% | |
| TACTAGAGGCTCTTCAAAAC+TGG | + | 21207:79285-79304 | None:intergenic | 40.0% | |
| TAGAAATCCCATTCCATGTG+TGG | + | 21207:77961-77980 | None:intergenic | 40.0% | |
| TATGTGTGCTTTCCCTTCAT+GGG | - | 21207:78907-78926 | MS.gene031205:intron | 40.0% | |
| TCAAGCATCTTATAGGGAAG+GGG | - | 21207:78737-78756 | MS.gene031205:intron | 40.0% | |
| TCTAAACCTTCCAAACGGTA+TGG | - | 21207:80704-80723 | MS.gene031205:CDS | 40.0% | |
| TCTCTTGAAACAGTTCGATC+AGG | - | 21207:76459-76478 | MS.gene031205:intron | 40.0% | |
| TGAAAAGGTGATCAACGAGA+TGG | - | 21207:80915-80934 | MS.gene031205:CDS | 40.0% | |
| TGAACAAATGTATGCGTTGC+TGG | - | 21207:79082-79101 | MS.gene031205:intron | 40.0% | |
| TGGAGTCTAAACCTTCCAAA+CGG | - | 21207:80699-80718 | MS.gene031205:CDS | 40.0% | |
| TTAGACTCCATCTGTGATCT+TGG | - | 21207:79329-79348 | MS.gene031205:CDS | 40.0% | |
| TTATGTGTGCTTTCCCTTCA+TGG | - | 21207:78906-78925 | MS.gene031205:intron | 40.0% | |
| TTCATCAACAAGCCTGCTTT+GGG | + | 21207:79129-79148 | None:intergenic | 40.0% | |
| TTGAGAGAACACATGAAGAC+AGG | - | 21207:76942-76961 | MS.gene031205:CDS | 40.0% | |
| TTTCATCAACAAGCCTGCTT+TGG | + | 21207:79130-79149 | None:intergenic | 40.0% | |
| ! | AGTGGTAAATGGTGGTAATG+TGG | + | 21207:77632-77651 | None:intergenic | 40.0% |
| ! | ATTTAAGCATCTTTGAGGGG+AGG | + | 21207:78126-78145 | None:intergenic | 40.0% |
| ! | TAGCCTTTTCTACAGATACG+TGG | - | 21207:78962-78981 | MS.gene031205:intron | 40.0% |
| ! | TATCAGAGGTAGGGTTTGTT+TGG | - | 21207:76567-76586 | MS.gene031205:intron | 40.0% |
| ! | TTGGGGTATTTCAGTATGGT+TGG | - | 21207:77501-77520 | MS.gene031205:intron | 40.0% |
| ! | TTTAAGCATCTTTGAGGGGA+GGG | + | 21207:78125-78144 | None:intergenic | 40.0% |
| !! | ATTAAAAGGGGGCATTGGAA+AGG | + | 21207:79908-79927 | None:intergenic | 40.0% |
| !! | CTCTTTCAGGTTGTTCTTCA+TGG | - | 21207:76313-76332 | MS.gene031205:intron | 40.0% |
| !! | GAATCAATGGCTTTGGGATA+TGG | - | 21207:76357-76376 | MS.gene031205:intron | 40.0% |
| !! | GAGTCAAGTTGGAAAACTTG+TGG | + | 21207:77191-77210 | None:intergenic | 40.0% |
| !! | GTCTTGTTTGCAGCTTGAAA+AGG | - | 21207:80900-80919 | MS.gene031205:CDS | 40.0% |
| !! | TGAACAACGAAGGTTTTGAC+TGG | + | 21207:76046-76065 | None:intergenic | 40.0% |
| !! | TTATGCAGCTTTTTGGGAGA+TGG | + | 21207:79563-79582 | None:intergenic | 40.0% |
| !! | TTTCCATTTTGATGCTTGGC+AGG | - | 21207:80204-80223 | MS.gene031205:intron | 40.0% |
| !!! | AACGAAGGTTTTGACTGGAT+CGG | + | 21207:76041-76060 | None:intergenic | 40.0% |
| !!! | CTGTTCTTTCTGGGGTTTTT+AGG | - | 21207:77984-78003 | MS.gene031205:intron | 40.0% |
| ACGGCCATTCAAGTGATACA+AGG | + | 21207:77840-77859 | None:intergenic | 45.0% | |
| AGAAACGGTCAGATAGGGTT+TGG | + | 21207:76132-76151 | None:intergenic | 45.0% | |
| AGAAGGCTCAGAGTCAATAG+AGG | + | 21207:79799-79818 | None:intergenic | 45.0% | |
| AGAGAGAGAGAGAGAGAACA+AGG | + | 21207:79449-79468 | None:intergenic | 45.0% | |
| AGCTTCCGAATCAATGGCTT+TGG | - | 21207:76350-76369 | MS.gene031205:intron | 45.0% | |
| AGTCCTGCCAAGCATCAAAA+TGG | + | 21207:80210-80229 | None:intergenic | 45.0% | |
| ATTCAAGCTTCTCTCAAGGG+AGG | + | 21207:78229-78248 | None:intergenic | 45.0% | |
| CAAGCTGCAAACAAGACAGA+CGG | + | 21207:80897-80916 | None:intergenic | 45.0% | |
| CCTATCTGACCGTTTCTTCA+AGG | - | 21207:76135-76154 | MS.gene031205:intron | 45.0% | |
| CCTTGAAGAAACGGTCAGAT+AGG | + | 21207:76138-76157 | None:intergenic | 45.0% | |
| CGAGATGGACAGTATAAAGC+TGG | - | 21207:80930-80949 | MS.gene031205:CDS | 45.0% | |
| CGCTGAAGGGGTAATAAACT+TGG | + | 21207:79261-79280 | None:intergenic | 45.0% | |
| CTCTTGGGTGATTATCACAC+TGG | - | 21207:77543-77562 | MS.gene031205:intron | 45.0% | |
| CTGAGGGTTCATTGTCTCTT+GGG | - | 21207:77528-77547 | MS.gene031205:intron | 45.0% | |
| GAGCAATTCACTGCAAACGA+TGG | - | 21207:77441-77460 | MS.gene031205:intron | 45.0% | |
| GCACATATCCACACATGGAA+TGG | - | 21207:77950-77969 | MS.gene031205:intron | 45.0% | |
| GCAGGACACAATTCATGTTG+TGG | - | 21207:80679-80698 | MS.gene031205:CDS | 45.0% | |
| GCTTCCGAATCAATGGCTTT+GGG | - | 21207:76351-76370 | MS.gene031205:intron | 45.0% | |
| GGTAGAGAAGACAGAAGACA+TGG | + | 21207:76210-76229 | None:intergenic | 45.0% | |
| GTTTCTTCAAGGACACACCA+TGG | - | 21207:76146-76165 | MS.gene031205:intron | 45.0% | |
| TACTGTTACCATCAAGACCC+AGG | + | 21207:80453-80472 | None:intergenic | 45.0% | |
| TCATCAACAAGCCTGCTTTG+GGG | + | 21207:79128-79147 | None:intergenic | 45.0% | |
| TCCAGAACCAAGATCACAGA+TGG | + | 21207:79339-79358 | None:intergenic | 45.0% | |
| TCCATCTGTGATCTTGGTTC+TGG | - | 21207:79335-79354 | MS.gene031205:CDS | 45.0% | |
| TCTCAGTTGCGAGAGAAGTA+TGG | - | 21207:79158-79177 | MS.gene031205:intron | 45.0% | |
| TGGAGATTACTTCTTGCGTC+AGG | - | 21207:80724-80743 | MS.gene031205:CDS | 45.0% | |
| TGTTAACTCGCTTCTTGGTC+AGG | - | 21207:80539-80558 | MS.gene031205:CDS | 45.0% | |
| TTCAAGCTTCTCTCAAGGGA+GGG | + | 21207:78228-78247 | None:intergenic | 45.0% | |
| TTTCTGGGCCACATAAACAC+AGG | - | 21207:80409-80428 | MS.gene031205:intron | 45.0% | |
| ! | CTTCTTGCGTCAGGTTGTTA+AGG | - | 21207:80733-80752 | MS.gene031205:CDS | 45.0% |
| ! | TGCGTCAGGTTGTTAAGGTA+TGG | - | 21207:80738-80757 | MS.gene031205:CDS | 45.0% |
| ! | TTAAGCATCTTTGAGGGGAG+GGG | + | 21207:78124-78143 | None:intergenic | 45.0% |
| ! | TTCAAGCATCTTTGAGGGGA+GGG | - | 21207:78826-78845 | MS.gene031205:intron | 45.0% |
| !! | ACTCATGCTGTTGATAGTGC+TGG | - | 21207:80254-80273 | MS.gene031205:intron | 45.0% |
| !! | CAGTATGGTTGGTTTGCTGA+GGG | - | 21207:77512-77531 | MS.gene031205:intron | 45.0% |
| !! | GTCTTTTGCTGTCTTAGGCT+TGG | - | 21207:77331-77350 | MS.gene031205:intron | 45.0% |
| !! | TCAGTATGGTTGGTTTGCTG+AGG | - | 21207:77511-77530 | MS.gene031205:intron | 45.0% |
| !! | TCGTCAGAGAATCGATTCGT+GGG | - | 21207:76276-76295 | MS.gene031205:intron | 45.0% |
| !! | TTCGTCAGAGAATCGATTCG+TGG | - | 21207:76275-76294 | MS.gene031205:intron | 45.0% |
| !!! | ACGAAGGTTTTGACTGGATC+GGG | + | 21207:76040-76059 | None:intergenic | 45.0% |
| !! | AAGTAATTTATATATTAAAA+GGG | + | 21207:79921-79940 | None:intergenic | 5.0% |
| !! | TAAGTAATTTATATATTAAA+AGG | + | 21207:79922-79941 | None:intergenic | 5.0% |
| !! | TTGTTTATTAAATATATATT+TGG | - | 21207:80162-80181 | MS.gene031205:intron | 5.0% |
| !!! | AAGAATTTATATTTTTTAAA+TGG | - | 21207:78618-78637 | MS.gene031205:intron | 5.0% |
| ACGGTAGAGGTGAACAACGA+AGG | + | 21207:76056-76075 | None:intergenic | 50.0% | |
| ACTGGATCGGGAACGAAGTT+GGG | + | 21207:76028-76047 | None:intergenic | 50.0% | |
| AGACTCTGGGCCTGTTTGAA+TGG | - | 21207:76875-76894 | MS.gene031205:CDS | 50.0% | |
| ATACTCGAGCAGGAGAAGGA+AGG | - | 21207:77414-77433 | MS.gene031205:intron | 50.0% | |
| CATCAACAAGCCTGCTTTGG+GGG | + | 21207:79127-79146 | None:intergenic | 50.0% | |
| CTAGCTTGAAGGCGAGAATC+AGG | - | 21207:80579-80598 | MS.gene031205:CDS | 50.0% | |
| CTGATTCTCGCCTTCAAGCT+AGG | + | 21207:80581-80600 | None:intergenic | 50.0% | |
| GAAGGCGAGAATCAGGCTTT+AGG | - | 21207:80586-80605 | MS.gene031205:CDS | 50.0% | |
| GCTGAGGGTTCATTGTCTCT+TGG | - | 21207:77527-77546 | MS.gene031205:intron | 50.0% | |
| GTATGGTTGCGTCTCCTTTG+CGG | - | 21207:80755-80774 | MS.gene031205:CDS | 50.0% | |
| GTATTGAGCGACAGCGTCTA+CGG | + | 21207:76176-76195 | None:intergenic | 50.0% | |
| GTCTTCTCTACCGTGAGATG+TGG | - | 21207:76218-76237 | MS.gene031205:CDS | 50.0% | |
| TACTCGAGCAGGAGAAGGAA+GGG | - | 21207:77415-77434 | MS.gene031205:intron | 50.0% | |
| TAGGAGTGAGACGAGCATAG+AGG | + | 21207:76252-76271 | None:intergenic | 50.0% | |
| TCAAGCTTCTCTCAAGGGAG+GGG | + | 21207:78227-78246 | None:intergenic | 50.0% | |
| TCAGATACTCGAGCAGGAGA+AGG | - | 21207:77410-77429 | MS.gene031205:intron | 50.0% | |
| TCGATTCTCTGACGAAGCGT+AGG | + | 21207:76271-76290 | None:intergenic | 50.0% | |
| TCTCTCTGATGTGACGGTAG+AGG | + | 21207:76069-76088 | None:intergenic | 50.0% | |
| TGACCTGCGGAGCATAAGAT+TGG | + | 21207:77664-77683 | None:intergenic | 50.0% | |
| TTAGTGGAAGTCGTGACCTG+CGG | + | 21207:77677-77696 | None:intergenic | 50.0% | |
| TTGCCAATCTTATGCTCCGC+AGG | - | 21207:77658-77677 | MS.gene031205:CDS | 50.0% | |
| ! | GTTCAAGCATCTTTGAGGGG+AGG | - | 21207:78825-78844 | MS.gene031205:intron | 50.0% |
| ! | TCAAGCATCTTTGAGGGGAG+GGG | - | 21207:78827-78846 | MS.gene031205:intron | 50.0% |
| ! | TCACACTGGTCTCAAGTGCT+TGG | - | 21207:77557-77576 | MS.gene031205:intron | 50.0% |
| !! | CTTCAAAACTGGGCGCTGAA+GGG | + | 21207:79274-79293 | None:intergenic | 50.0% |
| !! | GCTTTTTGGGAGATGGAGCT+AGG | + | 21207:79556-79575 | None:intergenic | 50.0% |
| !! | TCTTCAAAACTGGGCGCTGA+AGG | + | 21207:79275-79294 | None:intergenic | 50.0% |
| !! | TTCAAAACTGGGCGCTGAAG+GGG | + | 21207:79273-79292 | None:intergenic | 50.0% |
| CGAAGTTGGGATCGTAGCCT+AGG | + | 21207:76015-76034 | None:intergenic | 55.0% | |
| CGTAGCCTAGGTCTTGAGCT+TGG | + | 21207:76003-76022 | None:intergenic | 55.0% | |
| CGTCTCCAAGCTCAAGACCT+AGG | - | 21207:75995-76014 | MS.gene031205:CDS | 55.0% | |
| GACTGGATCGGGAACGAAGT+TGG | + | 21207:76029-76048 | None:intergenic | 55.0% | |
| GAGTGAGACGAGCATAGAGG+TGG | + | 21207:76249-76268 | None:intergenic | 55.0% | |
| GGTGGCGAAACCACATCTCA+CGG | + | 21207:76231-76250 | None:intergenic | 55.0% | |
| TGAGCGACAGCGTCTACGGA+GGG | + | 21207:76172-76191 | None:intergenic | 60.0% | |
| TTGAGCGACAGCGTCTACGG+AGG | + | 21207:76173-76192 | None:intergenic | 60.0% | |
| ACAGCGTCTACGGAGGGCCA+TGG | + | 21207:76166-76185 | None:intergenic | 65.0% | |
| TCTCGCTCTGCCCCCAAAGC+AGG | - | 21207:79114-79133 | MS.gene031205:intron | 65.0% | |
| !! | GCTTTGGGGGCAGAGCGAGA+GGG | + | 21207:79114-79133 | None:intergenic | 65.0% |
| !! | TGCTTTGGGGGCAGAGCGAG+AGG | + | 21207:79115-79134 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 21207 | gene | 75977 | 80957 | 75977 | ID=MS.gene031205 |
| 21207 | mRNA | 75977 | 80957 | 75977 | ID=MS.gene031205.t1;Parent=MS.gene031205 |
| 21207 | exon | 80454 | 80957 | 80454 | ID=MS.gene031205.t1.exon1;Parent=MS.gene031205.t1 |
| 21207 | CDS | 80454 | 80957 | 80454 | ID=cds.MS.gene031205.t1;Parent=MS.gene031205.t1 |
| 21207 | exon | 79255 | 79586 | 79255 | ID=MS.gene031205.t1.exon2;Parent=MS.gene031205.t1 |
| 21207 | CDS | 79255 | 79586 | 79255 | ID=cds.MS.gene031205.t1;Parent=MS.gene031205.t1 |
| 21207 | exon | 77618 | 77957 | 77618 | ID=MS.gene031205.t1.exon3;Parent=MS.gene031205.t1 |
| 21207 | CDS | 77618 | 77957 | 77618 | ID=cds.MS.gene031205.t1;Parent=MS.gene031205.t1 |
| 21207 | exon | 76825 | 76973 | 76825 | ID=MS.gene031205.t1.exon4;Parent=MS.gene031205.t1 |
| 21207 | CDS | 76825 | 76973 | 76825 | ID=cds.MS.gene031205.t1;Parent=MS.gene031205.t1 |
| 21207 | exon | 76615 | 76708 | 76615 | ID=MS.gene031205.t1.exon5;Parent=MS.gene031205.t1 |
| 21207 | CDS | 76615 | 76708 | 76615 | ID=cds.MS.gene031205.t1;Parent=MS.gene031205.t1 |
| 21207 | exon | 76180 | 76251 | 76180 | ID=MS.gene031205.t1.exon6;Parent=MS.gene031205.t1 |
| 21207 | CDS | 76180 | 76251 | 76180 | ID=cds.MS.gene031205.t1;Parent=MS.gene031205.t1 |
| 21207 | exon | 75977 | 76021 | 75977 | ID=MS.gene031205.t1.exon7;Parent=MS.gene031205.t1 |
| 21207 | CDS | 75977 | 76021 | 75977 | ID=cds.MS.gene031205.t1;Parent=MS.gene031205.t1 |
| Gene Sequence |
| Protein sequence |
