Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75309.t1 | XP_013461988.1 | 99.4 | 511 | 3 | 0 | 1 | 511 | 1 | 511 | 1.30E-297 | 1031.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75309.t1 | A7SDW5 | 45.1 | 503 | 250 | 8 | 20 | 508 | 35 | 525 | 1.8e-127 | 457.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75309.t1 | G7ZWE0 | 99.4 | 511 | 3 | 0 | 1 | 511 | 1 | 511 | 9.1e-298 | 1031.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049306 | MS.gene75309 | 0.869748 | 2.45E-66 | -1.69E-46 |
| MS.gene049376 | MS.gene75309 | 0.813777 | 2.16E-51 | -1.69E-46 |
| MS.gene051925 | MS.gene75309 | 0.874501 | 6.43E-68 | -1.69E-46 |
| MS.gene051927 | MS.gene75309 | 0.888819 | 4.21E-73 | -1.69E-46 |
| MS.gene054624 | MS.gene75309 | 0.815691 | 8.12E-52 | -1.69E-46 |
| MS.gene057321 | MS.gene75309 | 0.842334 | 2.76E-58 | -1.69E-46 |
| MS.gene057605 | MS.gene75309 | 0.831226 | 1.88E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene75309 | MS.gene40321 | PPI |
| MS.gene75309 | MS.gene031205 | PPI |
| MS.gene75309 | MS.gene014663 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75309.t1 | MTR_3g110068 | 99.413 | 511 | 3 | 0 | 1 | 511 | 1 | 511 | 0.0 | 1064 |
| MS.gene75309.t1 | MTR_3g109300 | 43.066 | 137 | 45 | 5 | 255 | 378 | 107 | 223 | 1.68e-18 | 89.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75309.t1 | AT5G25757 | 82.677 | 508 | 86 | 2 | 5 | 511 | 8 | 514 | 0.0 | 877 |
| MS.gene75309.t1 | AT5G25754 | 82.677 | 508 | 86 | 2 | 5 | 511 | 8 | 514 | 0.0 | 877 |
Find 103 sgRNAs with CRISPR-Local
Find 307 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTTCAGGTTGTTCTTCA+TGG | 0.130061 | 3.3:-90372635 | MS.gene75309:CDS |
| TAATTACTGCAGTCTCTTTC+AGG | 0.189483 | 3.3:-90372648 | MS.gene75309:CDS |
| GAATCAATGGCTTTGGGATA+TGG | 0.229252 | 3.3:-90372591 | MS.gene75309:CDS |
| AAGTAGATGAACCAACTTTA+AGG | 0.240848 | 3.3:-90368844 | MS.gene75309:intron |
| TACTAGAGGCTCTTCAAAAC+TGG | 0.270914 | 3.3:+90369669 | None:intergenic |
| TAGCAATGTCTTGAAAGTTT+TGG | 0.293530 | 3.3:-90371471 | MS.gene75309:CDS |
| TTCATCAACAAGCCTGCTTT+GGG | 0.303001 | 3.3:+90369825 | None:intergenic |
| GGTGTTTACACCATTGTTAT+TGG | 0.316510 | 3.3:-90371350 | MS.gene75309:CDS |
| CGCTGAAGGGGTAATAAACT+TGG | 0.322037 | 3.3:+90369693 | None:intergenic |
| CTGAGGGTTCATTGTCTCTT+GGG | 0.323751 | 3.3:-90371425 | MS.gene75309:CDS |
| GCTGAGGGTTCATTGTCTCT+TGG | 0.330424 | 3.3:-90371426 | MS.gene75309:CDS |
| ATTACCACCATTTACCACTA+TGG | 0.330766 | 3.3:-90371320 | MS.gene75309:CDS |
| AGCTTCCGAATCAATGGCTT+TGG | 0.332438 | 3.3:-90372598 | MS.gene75309:CDS |
| TTTCATCAACAAGCCTGCTT+TGG | 0.334356 | 3.3:+90369824 | None:intergenic |
| GGAAAGAAGTTTCGTACATT+TGG | 0.342653 | 3.3:+90372840 | None:intergenic |
| GGCAAAACCATAGTGGTAAA+TGG | 0.355256 | 3.3:+90371313 | None:intergenic |
| CTTCTTGCGTCAGGTTGTTA+AGG | 0.370724 | 3.3:-90368200 | MS.gene75309:intron |
| AAGCAACAACAGTTGTTATC+AGG | 0.387793 | 3.3:-90368929 | MS.gene75309:CDS |
| CCTATCTGACCGTTTCTTCA+AGG | 0.387841 | 3.3:-90372813 | MS.gene75309:CDS |
| AGAAACGGTCAGATAGGGTT+TGG | 0.394229 | 3.3:+90372819 | None:intergenic |
| TGAACAAATGTATGCGTTGC+TGG | 0.399391 | 3.3:-90369869 | MS.gene75309:CDS |
| GTTGTTGCTTTGCTTCATAA+AGG | 0.402516 | 3.3:+90368942 | None:intergenic |
| CCTGACTGACTAATATCAAT+AGG | 0.413043 | 3.3:+90371371 | None:intergenic |
| TTCAATATCTGTTCATATTG+TGG | 0.422018 | 3.3:+90369898 | None:intergenic |
| ACTGGATCGGGAACGAAGTT+GGG | 0.422123 | 3.3:+90372923 | None:intergenic |
| CTTGTACATCTTTAAGTACA+AGG | 0.428339 | 3.3:-90369938 | MS.gene75309:CDS |
| TCTCAGTTGCGAGAGAAGTA+TGG | 0.431894 | 3.3:-90369793 | MS.gene75309:CDS |
| CCTATTGATATTAGTCAGTC+AGG | 0.436140 | 3.3:-90371371 | MS.gene75309:CDS |
| TTGGGGTATTTCAGTATGGT+TGG | 0.437805 | 3.3:-90371452 | MS.gene75309:CDS |
| GACTGGATCGGGAACGAAGT+TGG | 0.438328 | 3.3:+90372922 | None:intergenic |
| GAAGTAATCTCCATACCGTT+TGG | 0.439729 | 3.3:+90368219 | None:intergenic |
| GCTTCCGAATCAATGGCTTT+GGG | 0.440244 | 3.3:-90372597 | MS.gene75309:CDS |
| TGCAAAACTTGCAAGTTACA+TGG | 0.442232 | 3.3:-90368867 | MS.gene75309:CDS |
| GTCTTGTTTGCAGCTTGAAA+AGG | 0.447914 | 3.3:-90368033 | MS.gene75309:intron |
| TCTTCAAAACTGGGCGCTGA+AGG | 0.452512 | 3.3:+90369679 | None:intergenic |
| CCTTGAAGAAACGGTCAGAT+AGG | 0.454544 | 3.3:+90372813 | None:intergenic |
| TGGAGATTACTTCTTGCGTC+AGG | 0.454633 | 3.3:-90368209 | MS.gene75309:CDS |
| AAGAAGTTTCGTACATTTGG+TGG | 0.477971 | 3.3:+90372843 | None:intergenic |
| AATATACTTTCAAGAAGGTC+CGG | 0.484004 | 3.3:+90368903 | None:intergenic |
| CAGTATGGTTGGTTTGCTGA+GGG | 0.489529 | 3.3:-90371441 | MS.gene75309:CDS |
| TCTCTTGAAACAGTTCGATC+AGG | 0.490945 | 3.3:-90372489 | MS.gene75309:intron |
| TGACCTGCGGAGCATAAGAT+TGG | 0.496399 | 3.3:+90371292 | None:intergenic |
| TCAGTATGGTTGGTTTGCTG+AGG | 0.497191 | 3.3:-90371442 | MS.gene75309:CDS |
| AAGTCTTGCAACCTTAAAGT+TGG | 0.500427 | 3.3:+90368833 | None:intergenic |
| ATATGCAGCTTCCGAATCAA+TGG | 0.505365 | 3.3:-90372604 | MS.gene75309:CDS |
| CTTCAAAACTGGGCGCTGAA+GGG | 0.514443 | 3.3:+90369680 | None:intergenic |
| ACTCATGCTGTTGATAGTGC+TGG | 0.515009 | 3.3:-90368679 | MS.gene75309:CDS |
| CGAGATGGACAGTATAAAGC+TGG | 0.519050 | 3.3:-90368003 | MS.gene75309:CDS |
| CTCTTGGGTGATTATCACAC+TGG | 0.525249 | 3.3:-90371410 | MS.gene75309:CDS |
| GCTGAAGGGGTAATAAACTT+GGG | 0.527613 | 3.3:+90369694 | None:intergenic |
| TCACACTGGTCTCAAGTGCT+TGG | 0.527814 | 3.3:-90371396 | MS.gene75309:CDS |
| ATAGAAATCCACATCAGCAT+TGG | 0.528493 | 3.3:+90368645 | None:intergenic |
| TTGCCAATCTTATGCTCCGC+AGG | 0.528690 | 3.3:-90371295 | MS.gene75309:intron |
| ATATCCCAAAGCCATTGATT+CGG | 0.529948 | 3.3:+90372593 | None:intergenic |
| CTTGAAGAAACGGTCAGATA+GGG | 0.530479 | 3.3:+90372814 | None:intergenic |
| ATGGTGTGTCCTTGAAGAAA+CGG | 0.530687 | 3.3:+90372804 | None:intergenic |
| CATCAACAAGCCTGCTTTGG+GGG | 0.533539 | 3.3:+90369827 | None:intergenic |
| TAATCTCCATACCGTTTGGA+AGG | 0.533943 | 3.3:+90368223 | None:intergenic |
| AGTAATATCCAATGCTGATG+TGG | 0.534293 | 3.3:-90368653 | MS.gene75309:CDS |
| AACAGTTGTTATCAGGTCTC+CGG | 0.535364 | 3.3:-90368922 | MS.gene75309:CDS |
| TCTCTCTGATGTGACGGTAG+AGG | 0.537475 | 3.3:+90372882 | None:intergenic |
| TACTCGAGCAGGAGAAGGAA+GGG | 0.539087 | 3.3:-90371538 | MS.gene75309:CDS |
| CGAAGTTGGGATCGTAGCCT+AGG | 0.539968 | 3.3:+90372936 | None:intergenic |
| GTATTGAGCGACAGCGTCTA+CGG | 0.542427 | 3.3:+90372775 | None:intergenic |
| TGTTGAATATACTTTCAAGA+AGG | 0.551618 | 3.3:+90368898 | None:intergenic |
| TCTAAACCTTCCAAACGGTA+TGG | 0.552675 | 3.3:-90368229 | MS.gene75309:CDS |
| TCGATTCTCTGACGAAGCGT+AGG | 0.552849 | 3.3:+90372680 | None:intergenic |
| TTCAAAACTGGGCGCTGAAG+GGG | 0.556525 | 3.3:+90369681 | None:intergenic |
| CGTAGCCTAGGTCTTGAGCT+TGG | 0.560532 | 3.3:+90372948 | None:intergenic |
| TTCGTCAGAGAATCGATTCG+TGG | 0.564246 | 3.3:-90372673 | MS.gene75309:CDS |
| GTCTTCTCTACCGTGAGATG+TGG | 0.569636 | 3.3:-90372730 | MS.gene75309:CDS |
| TCAGATACTCGAGCAGGAGA+AGG | 0.571169 | 3.3:-90371543 | MS.gene75309:CDS |
| ACTAGAGGCTCTTCAAAACT+GGG | 0.572995 | 3.3:+90369670 | None:intergenic |
| ATACTCGAGCAGGAGAAGGA+AGG | 0.578832 | 3.3:-90371539 | MS.gene75309:CDS |
| CATTCTTCTCTCTGATGTGA+CGG | 0.584120 | 3.3:+90372876 | None:intergenic |
| GCAGGACACAATTCATGTTG+TGG | 0.584900 | 3.3:-90368254 | MS.gene75309:intron |
| ACAGCGTCTACGGAGGGCCA+TGG | 0.585469 | 3.3:+90372785 | None:intergenic |
| CGTCTCCAAGCTCAAGACCT+AGG | 0.590090 | 3.3:-90372953 | MS.gene75309:CDS |
| ACCTGGTTGTAATTTACTAG+AGG | 0.590170 | 3.3:+90369655 | None:intergenic |
| TAAGATTGGCAAAACCATAG+TGG | 0.590299 | 3.3:+90371306 | None:intergenic |
| AATTATTCAGATACTCGAGC+AGG | 0.592977 | 3.3:-90371549 | MS.gene75309:CDS |
| TGAAAAGGTGATCAACGAGA+TGG | 0.601494 | 3.3:-90368018 | MS.gene75309:CDS |
| TGGAGTCTAAACCTTCCAAA+CGG | 0.607048 | 3.3:-90368234 | MS.gene75309:CDS |
| CATATTGTGGAGACTTCTGA+TGG | 0.618356 | 3.3:+90369911 | None:intergenic |
| TAGGAGTGAGACGAGCATAG+AGG | 0.619056 | 3.3:+90372699 | None:intergenic |
| TCGTCAGAGAATCGATTCGT+GGG | 0.622796 | 3.3:-90372672 | MS.gene75309:CDS |
| GAGTGAGACGAGCATAGAGG+TGG | 0.627092 | 3.3:+90372702 | None:intergenic |
| GCCTCTAGTAAATTACAACC+AGG | 0.628196 | 3.3:-90369656 | MS.gene75309:intron |
| GATGGCTATGATTACAATGG+TGG | 0.631082 | 3.3:-90371494 | MS.gene75309:CDS |
| TGAGCGACAGCGTCTACGGA+GGG | 0.640297 | 3.3:+90372779 | None:intergenic |
| GGTGGCGAAACCACATCTCA+CGG | 0.647100 | 3.3:+90372720 | None:intergenic |
| GAGCAATTCACTGCAAACGA+TGG | 0.649501 | 3.3:-90371512 | MS.gene75309:CDS |
| TCATCAACAAGCCTGCTTTG+GGG | 0.650115 | 3.3:+90369826 | None:intergenic |
| AGTGGTAAATGGTGGTAATG+TGG | 0.651980 | 3.3:+90371324 | None:intergenic |
| AATGCAACGATATGATGATG+AGG | 0.655375 | 3.3:-90369755 | MS.gene75309:CDS |
| CTGAAGGGGTAATAAACTTG+GGG | 0.662460 | 3.3:+90369695 | None:intergenic |
| TTGAGCGACAGCGTCTACGG+AGG | 0.671373 | 3.3:+90372778 | None:intergenic |
| GTTTCTTCAAGGACACACCA+TGG | 0.673800 | 3.3:-90372802 | MS.gene75309:CDS |
| AAAACCATAGTGGTAAATGG+TGG | 0.678504 | 3.3:+90371316 | None:intergenic |
| GGTAGAGAAGACAGAAGACA+TGG | 0.688600 | 3.3:+90372741 | None:intergenic |
| ACGGTAGAGGTGAACAACGA+AGG | 0.689816 | 3.3:+90372895 | None:intergenic |
| AACGATGGCTATGATTACAA+TGG | 0.723830 | 3.3:-90371497 | MS.gene75309:CDS |
| AATGTGGCATCCAATAACAA+TGG | 0.744265 | 3.3:+90371340 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAATAAAAAAAATTATTG+AGG | + | chr3.3:90370315-90370334 | None:intergenic | 10.0% |
| !! | AGTAATTTATATATTAAAAG+GGG | + | chr3.3:90371957-90371976 | None:intergenic | 10.0% |
| !! | AGTATTTATTTATGTTAAAA+TGG | - | chr3.3:90370686-90370705 | MS.gene75309:intron | 10.0% |
| !! | GAAATAAAAAAAATTATTGA+GGG | + | chr3.3:90370314-90370333 | None:intergenic | 10.0% |
| !! | TTATAAATTATTACATTACA+TGG | - | chr3.3:90370948-90370967 | MS.gene75309:intron | 10.0% |
| !!! | AAATTTTTTAAATAGTTTCT+GGG | - | chr3.3:90372430-90372449 | MS.gene75309:intron | 10.0% |
| !!! | ACGAATTTATATTTTTTAAA+TGG | - | chr3.3:90370636-90370655 | MS.gene75309:intron | 10.0% |
| !!! | CACATATTTTAATTTTATTT+TGG | + | chr3.3:90370498-90370517 | None:intergenic | 10.0% |
| !!! | TAAATTTTTTAAATAGTTTC+TGG | - | chr3.3:90372429-90372448 | MS.gene75309:intron | 10.0% |
| !! | AAAAAAAAAATATTGATCCA+AGG | + | chr3.3:90372180-90372199 | None:intergenic | 15.0% |
| !! | GTAATTTATATATTAAAAGG+GGG | + | chr3.3:90371956-90371975 | None:intergenic | 15.0% |
| !! | TAATTTATATATTAAAAGGG+GGG | + | chr3.3:90371955-90371974 | None:intergenic | 15.0% |
| !! | TTTAAATAACCATACTTAAT+CGG | + | chr3.3:90370535-90370554 | None:intergenic | 15.0% |
| !!! | AGATTTTATTTTAACATAAG+AGG | + | chr3.3:90370281-90370300 | None:intergenic | 15.0% |
| !!! | AGTATAAATTTTACTTTTCA+AGG | - | chr3.3:90370778-90370797 | MS.gene75309:intron | 15.0% |
| !!! | ATTTTATTTTAACATAAGAG+GGG | + | chr3.3:90370279-90370298 | None:intergenic | 15.0% |
| !!! | CTAATATGTTTTGAATAAAA+GGG | + | chr3.3:90370207-90370226 | None:intergenic | 15.0% |
| !!! | GATTTTATTTTAACATAAGA+GGG | + | chr3.3:90370280-90370299 | None:intergenic | 15.0% |
| !!! | GTATAAATTTTACTTTTCAA+GGG | - | chr3.3:90370779-90370798 | MS.gene75309:intron | 15.0% |
| !!! | TAATATGTTTTGAATAAAAG+GGG | + | chr3.3:90370206-90370225 | None:intergenic | 15.0% |
| !!! | TCTAATATGTTTTGAATAAA+AGG | + | chr3.3:90370208-90370227 | None:intergenic | 15.0% |
| !!! | TTTGAAATATAATTCTACAA+TGG | + | chr3.3:90370103-90370122 | None:intergenic | 15.0% |
| !! | AATAATTTATAACCCATGAA+GGG | + | chr3.3:90370940-90370959 | None:intergenic | 20.0% |
| !! | CAACTAAACTAATTTATTTG+AGG | - | chr3.3:90369822-90369841 | MS.gene75309:CDS | 20.0% |
| !! | CTTGACAAATCTAAATAATA+TGG | + | chr3.3:90372818-90372837 | None:intergenic | 20.0% |
| !! | TAATAATTTATAACCCATGA+AGG | + | chr3.3:90370941-90370960 | None:intergenic | 20.0% |
| !! | TATAGAAATAGCTTATACTT+AGG | - | chr3.3:90369098-90369117 | MS.gene75309:intron | 20.0% |
| !! | TGAATTACAATTGAACATTT+AGG | - | chr3.3:90370026-90370045 | MS.gene75309:intron | 20.0% |
| !! | TGTTTATGCTAGTATATAAA+GGG | + | chr3.3:90368869-90368888 | None:intergenic | 20.0% |
| !!! | AACTTCAAATTTGAAATGTT+TGG | + | chr3.3:90371410-90371429 | None:intergenic | 20.0% |
| !!! | AATTCAAATTTGAAGCTAAT+TGG | + | chr3.3:90371437-90371456 | None:intergenic | 20.0% |
| !!! | ACTTCAAATTTGAAATGTTT+GGG | + | chr3.3:90371409-90371428 | None:intergenic | 20.0% |
| !!! | AGTCCTTATTTACTTATTAA+GGG | - | chr3.3:90370719-90370738 | MS.gene75309:intron | 20.0% |
| !!! | AGTGTATATTTTAACATAAG+AGG | + | chr3.3:90370178-90370197 | None:intergenic | 20.0% |
| !!! | ATAAGCTATTTCTATAACAA+AGG | + | chr3.3:90369094-90369113 | None:intergenic | 20.0% |
| !!! | ATTTAGGATTCATTAGAAAT+TGG | - | chr3.3:90370042-90370061 | MS.gene75309:intron | 20.0% |
| !!! | CTCAAATAAATTAGTTTAGT+TGG | + | chr3.3:90369824-90369843 | None:intergenic | 20.0% |
| !!! | GTGTATATTTTAACATAAGA+GGG | + | chr3.3:90370177-90370196 | None:intergenic | 20.0% |
| !!! | TAGTCCTTATTTACTTATTA+AGG | - | chr3.3:90370718-90370737 | MS.gene75309:intron | 20.0% |
| !!! | TGTATATTTTAACATAAGAG+GGG | + | chr3.3:90370176-90370195 | None:intergenic | 20.0% |
| !!! | TTTATTATCTATTTTATCGG+AGG | - | chr3.3:90368573-90368592 | MS.gene75309:intron | 20.0% |
| ! | AAATAAGGTAAAAACAGCTA+TGG | + | chr3.3:90369184-90369203 | None:intergenic | 25.0% |
| ! | AATAAAGCCATTAACATAGA+AGG | + | chr3.3:90371853-90371872 | None:intergenic | 25.0% |
| ! | AGATTGAAATAAATCTGGTT+TGG | - | chr3.3:90371561-90371580 | MS.gene75309:CDS | 25.0% |
| ! | AGTGTATATTTCAACATAAG+AGG | - | chr3.3:90370807-90370826 | MS.gene75309:intron | 25.0% |
| ! | CTTATTTACTTATTAAGGGA+GGG | - | chr3.3:90370723-90370742 | MS.gene75309:intron | 25.0% |
| ! | CTTCTAGATTGAAATAAATC+TGG | - | chr3.3:90371556-90371575 | MS.gene75309:CDS | 25.0% |
| ! | GTGTATATTTCAACATAAGA+GGG | - | chr3.3:90370808-90370827 | MS.gene75309:intron | 25.0% |
| ! | GTGTTTATGCTAGTATATAA+AGG | + | chr3.3:90368870-90368889 | None:intergenic | 25.0% |
| ! | TAATTAATCTAGCATTTCCT+TGG | - | chr3.3:90372160-90372179 | MS.gene75309:intron | 25.0% |
| ! | TCAAAGAAAAATAGCATTGT+AGG | - | chr3.3:90370368-90370387 | MS.gene75309:intron | 25.0% |
| ! | TGTAATTCAAGCATCTTATA+GGG | - | chr3.3:90370749-90370768 | MS.gene75309:intron | 25.0% |
| ! | TGTAATTTAAGCATCTTTGA+GGG | + | chr3.3:90370146-90370165 | None:intergenic | 25.0% |
| ! | TGTATATTTCAACATAAGAG+GGG | - | chr3.3:90370809-90370828 | MS.gene75309:intron | 25.0% |
| ! | TGTTGAATATACTTTCAAGA+AGG | + | chr3.3:90372074-90372093 | None:intergenic | 25.0% |
| ! | TTATTAAAGCCGATTAAGTA+TGG | - | chr3.3:90370523-90370542 | MS.gene75309:intron | 25.0% |
| ! | TTATTTACTTATTAAGGGAG+GGG | - | chr3.3:90370724-90370743 | MS.gene75309:intron | 25.0% |
| ! | TTCAATATCTGTTCATATTG+TGG | + | chr3.3:90371074-90371093 | None:intergenic | 25.0% |
| ! | TTGTAATTCAAGCATCTTAT+AGG | - | chr3.3:90370748-90370767 | MS.gene75309:intron | 25.0% |
| !! | AACATAATTAAGACCCTTTT+TGG | + | chr3.3:90369327-90369346 | None:intergenic | 25.0% |
| !! | ATGATGTTTTCATTTATTGC+AGG | - | chr3.3:90372697-90372716 | MS.gene75309:CDS | 25.0% |
| !! | TTTTTGTTCAGTAGAACTTT+TGG | - | chr3.3:90368647-90368666 | MS.gene75309:CDS | 25.0% |
| !!! | AAATTTTACTTTTCAAGGGA+GGG | - | chr3.3:90370783-90370802 | MS.gene75309:intron | 25.0% |
| !!! | AGACAAAAACATTTGACTTT+TGG | - | chr3.3:90372857-90372876 | MS.gene75309:CDS | 25.0% |
| !!! | ATTGTTTTTGCAAATGCTAT+AGG | + | chr3.3:90368748-90368767 | None:intergenic | 25.0% |
| !!! | CTTGTTACCTGATTTTTTAT+GGG | - | chr3.3:90371738-90371757 | MS.gene75309:intron | 25.0% |
| !!! | TAAATTTTACTTTTCAAGGG+AGG | - | chr3.3:90370782-90370801 | MS.gene75309:intron | 25.0% |
| !!! | TATGTTAATGGCTTTATTTG+AGG | - | chr3.3:90371855-90371874 | MS.gene75309:intron | 25.0% |
| !!! | TATTTTTCTTTGAAGTGTGT+TGG | + | chr3.3:90370361-90370380 | None:intergenic | 25.0% |
| !!! | TTGTTACCTGATTTTTTATG+GGG | - | chr3.3:90371739-90371758 | MS.gene75309:intron | 25.0% |
| AAGTAGATGAACCAACTTTA+AGG | - | chr3.3:90372125-90372144 | MS.gene75309:intron | 30.0% | |
| AATATACTTTCAAGAAGGTC+CGG | + | chr3.3:90372069-90372088 | None:intergenic | 30.0% | |
| ACAAAATACCTGTGTTTATG+TGG | + | chr3.3:90372456-90372475 | None:intergenic | 30.0% | |
| ACTTATTTGAGCTTATCCAT+TGG | - | chr3.3:90368918-90368937 | MS.gene75309:CDS | 30.0% | |
| AGTAGTTGAGTATCATTTGA+AGG | - | chr3.3:90370067-90370086 | MS.gene75309:intron | 30.0% | |
| ATTTCTATCTCTGTTCTTTC+TGG | - | chr3.3:90369990-90370009 | MS.gene75309:intron | 30.0% | |
| CCTCCCTTAATAAGTAAATA+AGG | + | chr3.3:90370725-90370744 | None:intergenic | 30.0% | |
| CTTGTACATCTTTAAGTACA+AGG | - | chr3.3:90371031-90371050 | MS.gene75309:intron | 30.0% | |
| GTAATTTAAGCATCTTTGAG+GGG | + | chr3.3:90370145-90370164 | None:intergenic | 30.0% | |
| GTGTAATTTAAGCATCTTTG+AGG | + | chr3.3:90370147-90370166 | None:intergenic | 30.0% | |
| TATATATTAAAAGGGGGGAT+TGG | + | chr3.3:90371950-90371969 | None:intergenic | 30.0% | |
| TATGTACCCCATAAAAAATC+AGG | + | chr3.3:90371748-90371767 | None:intergenic | 30.0% | |
| TATTAATTGTCCTAGCTTGA+AGG | - | chr3.3:90372604-90372623 | MS.gene75309:CDS | 30.0% | |
| TATTTACTTATTAAGGGAGG+GGG | - | chr3.3:90370725-90370744 | MS.gene75309:intron | 30.0% | |
| TCAAATAAGTCCATTCAAAC+AGG | + | chr3.3:90368908-90368927 | None:intergenic | 30.0% | |
| TCTTCAAAGAGAAAAGGATT+AGG | + | chr3.3:90372385-90372404 | None:intergenic | 30.0% | |
| TGAATCTCTTCAAAGAGAAA+AGG | + | chr3.3:90372391-90372410 | None:intergenic | 30.0% | |
| TGTAATTCAAGCATCTTTGA+GGG | - | chr3.3:90370839-90370858 | MS.gene75309:intron | 30.0% | |
| TTGGAAAACTTGTGGAAATA+AGG | + | chr3.3:90369199-90369218 | None:intergenic | 30.0% | |
| TTTCTATCTCTGTTCTTTCT+GGG | - | chr3.3:90369991-90370010 | MS.gene75309:intron | 30.0% | |
| ! | AGCAATGTCTTGAAAGTTTT+GGG | - | chr3.3:90369499-90369518 | MS.gene75309:intron | 30.0% |
| ! | AGTCTAAGATAAGATATACC+TGG | + | chr3.3:90371334-90371353 | None:intergenic | 30.0% |
| ! | CCTTATTTACTTATTAAGGG+AGG | - | chr3.3:90370722-90370741 | MS.gene75309:intron | 30.0% |
| ! | TAGCAATGTCTTGAAAGTTT+TGG | - | chr3.3:90369498-90369517 | MS.gene75309:intron | 30.0% |
| ! | TAGTATATAAAGGGCTTGTT+TGG | + | chr3.3:90368860-90368879 | None:intergenic | 30.0% |
| ! | TATCTATTTTATCGGAGGTA+GGG | - | chr3.3:90368578-90368597 | MS.gene75309:intron | 30.0% |
| ! | TATTTGAGTTTGTGTCTGTT+TGG | - | chr3.3:90368617-90368636 | MS.gene75309:intron | 30.0% |
| ! | TTATCTATTTTATCGGAGGT+AGG | - | chr3.3:90368577-90368596 | MS.gene75309:intron | 30.0% |
| ! | TTCTCTTTATGCAGCTTTTT+GGG | + | chr3.3:90371604-90371623 | None:intergenic | 30.0% |
| ! | TTTCTCTTTATGCAGCTTTT+TGG | + | chr3.3:90371605-90371624 | None:intergenic | 30.0% |
| !! | AATTTTACTTTTCAAGGGAG+GGG | - | chr3.3:90370784-90370803 | MS.gene75309:intron | 30.0% |
| !! | ATGTTTTGAATAAAAGGGGA+GGG | + | chr3.3:90370202-90370221 | None:intergenic | 30.0% |
| !! | GAACTTTTGGAAACAACTTA+TGG | - | chr3.3:90368660-90368679 | MS.gene75309:CDS | 30.0% |
| !! | TATGTTTTGAATAAAAGGGG+AGG | + | chr3.3:90370203-90370222 | None:intergenic | 30.0% |
| !!! | ATATTTTAACATAAGAGGGG+AGG | + | chr3.3:90370173-90370192 | None:intergenic | 30.0% |
| !!! | GCTTGTTACCTGATTTTTTA+TGG | - | chr3.3:90371737-90371756 | MS.gene75309:intron | 30.0% |
| !!! | TATTTTAACATAAGAGGGGA+GGG | + | chr3.3:90370172-90370191 | None:intergenic | 30.0% |
| !!! | TTATTTTAACATAAGAGGGG+AGG | + | chr3.3:90370276-90370295 | None:intergenic | 30.0% |
| AAAACCATAGTGGTAAATGG+TGG | + | chr3.3:90369656-90369675 | None:intergenic | 35.0% | |
| AACGATGGCTATGATTACAA+TGG | - | chr3.3:90369472-90369491 | MS.gene75309:intron | 35.0% | |
| AAGAAGTTTCGTACATTTGG+TGG | + | chr3.3:90368129-90368148 | None:intergenic | 35.0% | |
| AAGCAACAACAGTTGTTATC+AGG | - | chr3.3:90372040-90372059 | MS.gene75309:intron | 35.0% | |
| AAGTCTTGCAACCTTAAAGT+TGG | + | chr3.3:90372139-90372158 | None:intergenic | 35.0% | |
| AATGTGGCATCCAATAACAA+TGG | + | chr3.3:90369632-90369651 | None:intergenic | 35.0% | |
| AATTATTCAGATACTCGAGC+AGG | - | chr3.3:90369420-90369439 | MS.gene75309:intron | 35.0% | |
| ACCAATATTATTTGAGCCTG+TGG | + | chr3.3:90369907-90369926 | None:intergenic | 35.0% | |
| ACCTGGTTGTAATTTACTAG+AGG | + | chr3.3:90371317-90371336 | None:intergenic | 35.0% | |
| AGTAATATCCAATGCTGATG+TGG | - | chr3.3:90372316-90372335 | MS.gene75309:intron | 35.0% | |
| AGTTTAAACCTGTGTCTTGA+TGG | - | chr3.3:90372478-90372497 | MS.gene75309:intron | 35.0% | |
| ATACACTGACAGAATAGAGA+CGG | + | chr3.3:90369875-90369894 | None:intergenic | 35.0% | |
| ATAGAAATCCACATCAGCAT+TGG | + | chr3.3:90372327-90372346 | None:intergenic | 35.0% | |
| ATATTTCAACATAAGAGGGG+AGG | - | chr3.3:90370812-90370831 | MS.gene75309:intron | 35.0% | |
| ATCTAAACAATGACAGCTGA+TGG | + | chr3.3:90371910-90371929 | None:intergenic | 35.0% | |
| ATGAAGCTGTTCATCCAAAA+AGG | - | chr3.3:90369310-90369329 | MS.gene75309:intron | 35.0% | |
| ATTACCACCATTTACCACTA+TGG | - | chr3.3:90369649-90369668 | MS.gene75309:intron | 35.0% | |
| ATTCAAGCATCTTATAGGGA+AGG | - | chr3.3:90370753-90370772 | MS.gene75309:intron | 35.0% | |
| CCTATTGATATTAGTCAGTC+AGG | - | chr3.3:90369598-90369617 | MS.gene75309:intron | 35.0% | |
| CCTGACTGACTAATATCAAT+AGG | + | chr3.3:90369601-90369620 | None:intergenic | 35.0% | |
| CGTAACAAAATGCAAGCAAT+GGG | + | chr3.3:90372885-90372904 | None:intergenic | 35.0% | |
| CTAAATAATATGGACCGCAA+AGG | + | chr3.3:90372808-90372827 | None:intergenic | 35.0% | |
| GCTGTTGTCATAAACTATCT+TGG | + | chr3.3:90369034-90369053 | None:intergenic | 35.0% | |
| GGAAAGAAGTTTCGTACATT+TGG | + | chr3.3:90368132-90368151 | None:intergenic | 35.0% | |
| GGTGTTTACACCATTGTTAT+TGG | - | chr3.3:90369619-90369638 | MS.gene75309:intron | 35.0% | |
| GTAATTCAAGCATCTTTGAG+GGG | - | chr3.3:90370840-90370859 | MS.gene75309:intron | 35.0% | |
| GTAATTCAAGCTTCTCTCAA+GGG | + | chr3.3:90370248-90370267 | None:intergenic | 35.0% | |
| GTGTAATTCAAGCATCTTTG+AGG | - | chr3.3:90370838-90370857 | MS.gene75309:intron | 35.0% | |
| TAAGATTGGCAAAACCATAG+TGG | + | chr3.3:90369666-90369685 | None:intergenic | 35.0% | |
| TAATTACTGCAGTCTCTTTC+AGG | - | chr3.3:90368321-90368340 | MS.gene75309:intron | 35.0% | |
| TATTTCAACATAAGAGGGGA+GGG | - | chr3.3:90370813-90370832 | MS.gene75309:intron | 35.0% | |
| TCCACAGGCTCAAATAATAT+TGG | - | chr3.3:90369903-90369922 | MS.gene75309:CDS | 35.0% | |
| TCGTAACAAAATGCAAGCAA+TGG | + | chr3.3:90372886-90372905 | None:intergenic | 35.0% | |
| TCTAAACAATGACAGCTGAT+GGG | + | chr3.3:90371909-90371928 | None:intergenic | 35.0% | |
| TGAAGCTGTTCATCCAAAAA+GGG | - | chr3.3:90369311-90369330 | MS.gene75309:intron | 35.0% | |
| TGCAAAACTTGCAAGTTACA+TGG | - | chr3.3:90372102-90372121 | MS.gene75309:intron | 35.0% | |
| TGTAATTCAAGCTTCTCTCA+AGG | + | chr3.3:90370249-90370268 | None:intergenic | 35.0% | |
| TTATACTTAGGCGCTTATCA+TGG | - | chr3.3:90369110-90369129 | MS.gene75309:intron | 35.0% | |
| TTCAAGCATCTTATAGGGAA+GGG | - | chr3.3:90370754-90370773 | MS.gene75309:intron | 35.0% | |
| TTCTATCTCTGTTCTTTCTG+GGG | - | chr3.3:90369992-90370011 | MS.gene75309:intron | 35.0% | |
| TTGAGTATCATTTGAAGGTG+TGG | - | chr3.3:90370072-90370091 | MS.gene75309:intron | 35.0% | |
| TTTGCCTTGTATCACTTGAA+TGG | - | chr3.3:90369849-90369868 | MS.gene75309:CDS | 35.0% | |
| ! | AAACTATCTTGGAGTGCTTA+TGG | + | chr3.3:90369023-90369042 | None:intergenic | 35.0% |
| ! | AATGCAACGATATGATGATG+AGG | - | chr3.3:90371214-90371233 | MS.gene75309:intron | 35.0% |
| ! | ATATCCCAAAGCCATTGATT+CGG | + | chr3.3:90368379-90368398 | None:intergenic | 35.0% |
| ! | GCAATGTCTTGAAAGTTTTG+GGG | - | chr3.3:90369500-90369519 | MS.gene75309:intron | 35.0% |
| ! | TCTTAGGCTTGGAATGTTTT+TGG | - | chr3.3:90369358-90369377 | MS.gene75309:intron | 35.0% |
| !! | ATGTTGTCTTTTGCTGTCTT+AGG | - | chr3.3:90369342-90369361 | MS.gene75309:intron | 35.0% |
| !! | ATTTTAACATAAGAGGGGAG+GGG | + | chr3.3:90370171-90370190 | None:intergenic | 35.0% |
| !! | GTAACTTGCAAGTTTTGCAA+GGG | + | chr3.3:90372101-90372120 | None:intergenic | 35.0% |
| !! | GTTGTTGCTTTGCTTCATAA+AGG | + | chr3.3:90372030-90372049 | None:intergenic | 35.0% |
| !! | GTTGTTTTCATGAGTCAAGT+TGG | + | chr3.3:90369218-90369237 | None:intergenic | 35.0% |
| !! | TGCATTTCCATTTTGATGCT+TGG | - | chr3.3:90372236-90372255 | MS.gene75309:intron | 35.0% |
| !! | TGTAACTTGCAAGTTTTGCA+AGG | + | chr3.3:90372102-90372121 | None:intergenic | 35.0% |
| !!! | AGTTTTGGGGTATTTCAGTA+TGG | - | chr3.3:90369513-90369532 | MS.gene75309:intron | 35.0% |
| AACAGTTGTTATCAGGTCTC+CGG | - | chr3.3:90372047-90372066 | MS.gene75309:intron | 40.0% | |
| ACCAAGAAGCGAGTTAACAA+CGG | + | chr3.3:90372574-90372593 | None:intergenic | 40.0% | |
| ACTAGAGGCTCTTCAAAACT+GGG | + | chr3.3:90371302-90371321 | None:intergenic | 40.0% | |
| AGAGAAAAGGATTAGGCAAG+AGG | + | chr3.3:90372378-90372397 | None:intergenic | 40.0% | |
| ATATGCAGCTTCCGAATCAA+TGG | - | chr3.3:90368365-90368384 | MS.gene75309:intron | 40.0% | |
| ATCTTGCACATATCCACACA+TGG | - | chr3.3:90369961-90369980 | MS.gene75309:CDS | 40.0% | |
| ATGGTGTGTCCTTGAAGAAA+CGG | + | chr3.3:90368168-90368187 | None:intergenic | 40.0% | |
| ATTAAAAGGGGGGATTGGAA+AGG | + | chr3.3:90371945-90371964 | None:intergenic | 40.0% | |
| ATTTCAACATAAGAGGGGAG+GGG | - | chr3.3:90370814-90370833 | MS.gene75309:intron | 40.0% | |
| CACATATCCACACATGGAAT+GGG | - | chr3.3:90369967-90369986 | MS.gene75309:CDS | 40.0% | |
| CACTCACTCAAAATGCTCTA+TGG | + | chr3.3:90371380-90371399 | None:intergenic | 40.0% | |
| CAGCTATGGAACACATCATA+AGG | + | chr3.3:90369170-90369189 | None:intergenic | 40.0% | |
| CATAAACACTTACGAGACTC+TGG | - | chr3.3:90368881-90368900 | MS.gene75309:CDS | 40.0% | |
| CATATTGTGGAGACTTCTGA+TGG | + | chr3.3:90371061-90371080 | None:intergenic | 40.0% | |
| CATCCACGTATCTGTAGAAA+AGG | + | chr3.3:90370986-90371005 | None:intergenic | 40.0% | |
| CATTCTTCTCTCTGATGTGA+CGG | + | chr3.3:90368096-90368115 | None:intergenic | 40.0% | |
| CTCTGAGCCTTCTATGTTAA+TGG | - | chr3.3:90371843-90371862 | MS.gene75309:intron | 40.0% | |
| CTGAAGGGGTAATAAACTTG+GGG | + | chr3.3:90371277-90371296 | None:intergenic | 40.0% | |
| CTTGAAGAAACGGTCAGATA+GGG | + | chr3.3:90368158-90368177 | None:intergenic | 40.0% | |
| GAAGTAATCTCCATACCGTT+TGG | + | chr3.3:90372753-90372772 | None:intergenic | 40.0% | |
| GATGGCTATGATTACAATGG+TGG | - | chr3.3:90369475-90369494 | MS.gene75309:intron | 40.0% | |
| GCAAGCAAGCAATTGATTAG+TGG | + | chr3.3:90369709-90369728 | None:intergenic | 40.0% | |
| GCCTCTAGTAAATTACAACC+AGG | - | chr3.3:90371313-90371332 | MS.gene75309:CDS | 40.0% | |
| GCTGAAGGGGTAATAAACTT+GGG | + | chr3.3:90371278-90371297 | None:intergenic | 40.0% | |
| GGCAAAACCATAGTGGTAAA+TGG | + | chr3.3:90369659-90369678 | None:intergenic | 40.0% | |
| GTCACAAGTGTTTATGCCAA+TGG | + | chr3.3:90368937-90368956 | None:intergenic | 40.0% | |
| GTCTCTATTCTGTCAGTGTA+TGG | - | chr3.3:90369874-90369893 | MS.gene75309:CDS | 40.0% | |
| TAATCTCCATACCGTTTGGA+AGG | + | chr3.3:90372749-90372768 | None:intergenic | 40.0% | |
| TACTAGAGGCTCTTCAAAAC+TGG | + | chr3.3:90371303-90371322 | None:intergenic | 40.0% | |
| TACTGTTACCATCAAGACAC+AGG | + | chr3.3:90372489-90372508 | None:intergenic | 40.0% | |
| TAGAAATCCCATTCCATGTG+TGG | + | chr3.3:90369977-90369996 | None:intergenic | 40.0% | |
| TATGTGTGCTTTCCCTTCAT+GGG | - | chr3.3:90370925-90370944 | MS.gene75309:intron | 40.0% | |
| TCAAGCATCTTATAGGGAAG+GGG | - | chr3.3:90370755-90370774 | MS.gene75309:intron | 40.0% | |
| TCTAAACCTTCCAAACGGTA+TGG | - | chr3.3:90372740-90372759 | MS.gene75309:CDS | 40.0% | |
| TCTCTTGAAACAGTTCGATC+AGG | - | chr3.3:90368480-90368499 | MS.gene75309:intron | 40.0% | |
| TGAAAAGGTGATCAACGAGA+TGG | - | chr3.3:90372951-90372970 | MS.gene75309:CDS | 40.0% | |
| TGAACAAATGTATGCGTTGC+TGG | - | chr3.3:90371100-90371119 | MS.gene75309:intron | 40.0% | |
| TGGAGTCTAAACCTTCCAAA+CGG | - | chr3.3:90372735-90372754 | MS.gene75309:CDS | 40.0% | |
| TTAGACTCCATCTGTGATCT+TGG | - | chr3.3:90371347-90371366 | MS.gene75309:CDS | 40.0% | |
| TTATGTGTGCTTTCCCTTCA+TGG | - | chr3.3:90370924-90370943 | MS.gene75309:intron | 40.0% | |
| TTCATCAACAAGCCTGCTTT+GGG | + | chr3.3:90371147-90371166 | None:intergenic | 40.0% | |
| TTGAGAGAACACATGAAGAC+AGG | - | chr3.3:90368962-90368981 | MS.gene75309:CDS | 40.0% | |
| TTTCATCAACAAGCCTGCTT+TGG | + | chr3.3:90371148-90371167 | None:intergenic | 40.0% | |
| ! | AGTGGTAAATGGTGGTAATG+TGG | + | chr3.3:90369648-90369667 | None:intergenic | 40.0% |
| ! | ATTTAAGCATCTTTGAGGGG+AGG | + | chr3.3:90370142-90370161 | None:intergenic | 40.0% |
| ! | TAGCCTTTTCTACAGATACG+TGG | - | chr3.3:90370980-90370999 | MS.gene75309:intron | 40.0% |
| ! | TTGGGGTATTTCAGTATGGT+TGG | - | chr3.3:90369517-90369536 | MS.gene75309:intron | 40.0% |
| ! | TTTAAGCATCTTTGAGGGGA+GGG | + | chr3.3:90370141-90370160 | None:intergenic | 40.0% |
| !! | CTCTTTCAGGTTGTTCTTCA+TGG | - | chr3.3:90368334-90368353 | MS.gene75309:intron | 40.0% |
| !! | GAATCAATGGCTTTGGGATA+TGG | - | chr3.3:90368378-90368397 | MS.gene75309:intron | 40.0% |
| !! | GAGTCAAGTTGGAAAACTTG+TGG | + | chr3.3:90369207-90369226 | None:intergenic | 40.0% |
| !! | GTCTTGTTTGCAGCTTGAAA+AGG | - | chr3.3:90372936-90372955 | MS.gene75309:CDS | 40.0% |
| !! | TGAACAACGAAGGTTTTGAC+TGG | + | chr3.3:90368067-90368086 | None:intergenic | 40.0% |
| !! | TTATGCAGCTTTTTGGGAGA+TGG | + | chr3.3:90371598-90371617 | None:intergenic | 40.0% |
| !! | TTTCCATTTTGATGCTTGGC+AGG | - | chr3.3:90372240-90372259 | MS.gene75309:intron | 40.0% |
| !!! | AACGAAGGTTTTGACTGGAT+CGG | + | chr3.3:90368062-90368081 | None:intergenic | 40.0% |
| !!! | CTGTTCTTTCTGGGGTTTTT+AGG | - | chr3.3:90370000-90370019 | MS.gene75309:intron | 40.0% |
| ACCGTTGTTAACTCGCTTCT+TGG | - | chr3.3:90372570-90372589 | MS.gene75309:CDS | 45.0% | |
| ACGGCCATTCAAGTGATACA+AGG | + | chr3.3:90369856-90369875 | None:intergenic | 45.0% | |
| AGAAACGGTCAGATAGGGTT+TGG | + | chr3.3:90368153-90368172 | None:intergenic | 45.0% | |
| AGAAGGCTCAGAGTCAATAG+AGG | + | chr3.3:90371836-90371855 | None:intergenic | 45.0% | |
| AGACTCTGGACCTGTTTGAA+TGG | - | chr3.3:90368895-90368914 | MS.gene75309:CDS | 45.0% | |
| AGAGAGAGAGAGAGAGAACA+AGG | + | chr3.3:90371467-90371486 | None:intergenic | 45.0% | |
| AGCTTCCGAATCAATGGCTT+TGG | - | chr3.3:90368371-90368390 | MS.gene75309:intron | 45.0% | |
| AGTCCTGCCAAGCATCAAAA+TGG | + | chr3.3:90372246-90372265 | None:intergenic | 45.0% | |
| AGTGTATGGTTCATGTCCAC+AGG | - | chr3.3:90369888-90369907 | MS.gene75309:CDS | 45.0% | |
| ATTCAAGCTTCTCTCAAGGG+AGG | + | chr3.3:90370245-90370264 | None:intergenic | 45.0% | |
| CAAGCTGCAAACAAGACAGA+CGG | + | chr3.3:90372933-90372952 | None:intergenic | 45.0% | |
| CCTATCTGACCGTTTCTTCA+AGG | - | chr3.3:90368156-90368175 | MS.gene75309:intron | 45.0% | |
| CCTTGAAGAAACGGTCAGAT+AGG | + | chr3.3:90368159-90368178 | None:intergenic | 45.0% | |
| CGAGATGGACAGTATAAAGC+TGG | - | chr3.3:90372966-90372985 | MS.gene75309:CDS | 45.0% | |
| CGCTGAAGGGGTAATAAACT+TGG | + | chr3.3:90371279-90371298 | None:intergenic | 45.0% | |
| CTCTTGGGTGATTATCACAC+TGG | - | chr3.3:90369559-90369578 | MS.gene75309:intron | 45.0% | |
| CTGAGGGTTCATTGTCTCTT+GGG | - | chr3.3:90369544-90369563 | MS.gene75309:intron | 45.0% | |
| GAGCAATTCACTGCAAACGA+TGG | - | chr3.3:90369457-90369476 | MS.gene75309:intron | 45.0% | |
| GCACATATCCACACATGGAA+TGG | - | chr3.3:90369966-90369985 | MS.gene75309:CDS | 45.0% | |
| GCAGGACACAATTCATGTTG+TGG | - | chr3.3:90372715-90372734 | MS.gene75309:CDS | 45.0% | |
| GCTTCCGAATCAATGGCTTT+GGG | - | chr3.3:90368372-90368391 | MS.gene75309:intron | 45.0% | |
| GGTAGAGAAGACAGAAGACA+TGG | + | chr3.3:90368231-90368250 | None:intergenic | 45.0% | |
| GTTTCTTCAAGGACACACCA+TGG | - | chr3.3:90368167-90368186 | MS.gene75309:intron | 45.0% | |
| TCATCAACAAGCCTGCTTTG+GGG | + | chr3.3:90371146-90371165 | None:intergenic | 45.0% | |
| TCCAGAACCAAGATCACAGA+TGG | + | chr3.3:90371357-90371376 | None:intergenic | 45.0% | |
| TCCATCTGTGATCTTGGTTC+TGG | - | chr3.3:90371353-90371372 | MS.gene75309:CDS | 45.0% | |
| TCTCAGTTGCGAGAGAAGTA+TGG | - | chr3.3:90371176-90371195 | MS.gene75309:intron | 45.0% | |
| TGGAGATTACTTCTTGCGTC+AGG | - | chr3.3:90372760-90372779 | MS.gene75309:CDS | 45.0% | |
| TGTTAACTCGCTTCTTGGTC+AGG | - | chr3.3:90372575-90372594 | MS.gene75309:CDS | 45.0% | |
| TTCAAGCTTCTCTCAAGGGA+GGG | + | chr3.3:90370244-90370263 | None:intergenic | 45.0% | |
| TTTCTGGGCCACATAAACAC+AGG | - | chr3.3:90372445-90372464 | MS.gene75309:intron | 45.0% | |
| ! | ATTCAAGCATCTTTGAGGGG+AGG | - | chr3.3:90370843-90370862 | MS.gene75309:intron | 45.0% |
| ! | CTTCTTGCGTCAGGTTGTTA+AGG | - | chr3.3:90372769-90372788 | MS.gene75309:CDS | 45.0% |
| ! | TATCGGAGGTAGGGTTTGTT+TGG | - | chr3.3:90368587-90368606 | MS.gene75309:intron | 45.0% |
| ! | TGCGTCAGGTTGTTAAGGTA+TGG | - | chr3.3:90372774-90372793 | MS.gene75309:CDS | 45.0% |
| ! | TTAAGCATCTTTGAGGGGAG+GGG | + | chr3.3:90370140-90370159 | None:intergenic | 45.0% |
| ! | TTCAAGCATCTTTGAGGGGA+GGG | - | chr3.3:90370844-90370863 | MS.gene75309:intron | 45.0% |
| !! | ACTCATGCTGTTGATAGTGC+TGG | - | chr3.3:90372290-90372309 | MS.gene75309:intron | 45.0% |
| !! | CAGTATGGTTGGTTTGCTGA+GGG | - | chr3.3:90369528-90369547 | MS.gene75309:intron | 45.0% |
| !! | GTCTTTTGCTGTCTTAGGCT+TGG | - | chr3.3:90369347-90369366 | MS.gene75309:intron | 45.0% |
| !! | TCAGTATGGTTGGTTTGCTG+AGG | - | chr3.3:90369527-90369546 | MS.gene75309:intron | 45.0% |
| !! | TCGTCAGAGAATCGATTCGT+GGG | - | chr3.3:90368297-90368316 | MS.gene75309:intron | 45.0% |
| !! | TTCGTCAGAGAATCGATTCG+TGG | - | chr3.3:90368296-90368315 | MS.gene75309:intron | 45.0% |
| !!! | ACGAAGGTTTTGACTGGATC+GGG | + | chr3.3:90368061-90368080 | None:intergenic | 45.0% |
| !! | AAGTAATTTATATATTAAAA+GGG | + | chr3.3:90371958-90371977 | None:intergenic | 5.0% |
| !! | TAAGTAATTTATATATTAAA+AGG | + | chr3.3:90371959-90371978 | None:intergenic | 5.0% |
| !! | TTGTTTATTAAATATATATT+TGG | - | chr3.3:90372198-90372217 | MS.gene75309:intron | 5.0% |
| !!! | ACATATTTTAATTTTATTTT+GGG | + | chr3.3:90370497-90370516 | None:intergenic | 5.0% |
| !!! | TTTTTTATTATCTATTTTAT+CGG | - | chr3.3:90368570-90368589 | MS.gene75309:intron | 5.0% |
| ACGGTAGAGGTGAACAACGA+AGG | + | chr3.3:90368077-90368096 | None:intergenic | 50.0% | |
| ACTGGATCGGGAACGAAGTT+GGG | + | chr3.3:90368049-90368068 | None:intergenic | 50.0% | |
| ATACTCGAGCAGGAGAAGGA+AGG | - | chr3.3:90369430-90369449 | MS.gene75309:intron | 50.0% | |
| CATCAACAAGCCTGCTTTGG+GGG | + | chr3.3:90371145-90371164 | None:intergenic | 50.0% | |
| CTAGCTTGAAGGCGAGAATC+AGG | - | chr3.3:90372615-90372634 | MS.gene75309:CDS | 50.0% | |
| CTGATTCTCGCCTTCAAGCT+AGG | + | chr3.3:90372617-90372636 | None:intergenic | 50.0% | |
| GAAGGCGAGAATCAGGCTTT+AGG | - | chr3.3:90372622-90372641 | MS.gene75309:CDS | 50.0% | |
| GCTGAGGGTTCATTGTCTCT+TGG | - | chr3.3:90369543-90369562 | MS.gene75309:intron | 50.0% | |
| GTATGGTTGCGTCTCCTTTG+CGG | - | chr3.3:90372791-90372810 | MS.gene75309:CDS | 50.0% | |
| GTATTGAGCGACAGCGTCTA+CGG | + | chr3.3:90368197-90368216 | None:intergenic | 50.0% | |
| GTCTTCTCTACCGTGAGATG+TGG | - | chr3.3:90368239-90368258 | MS.gene75309:CDS | 50.0% | |
| TACTCGAGCAGGAGAAGGAA+GGG | - | chr3.3:90369431-90369450 | MS.gene75309:intron | 50.0% | |
| TAGGAGTGAGACGAGCATAG+AGG | + | chr3.3:90368273-90368292 | None:intergenic | 50.0% | |
| TCAAGCTTCTCTCAAGGGAG+GGG | + | chr3.3:90370243-90370262 | None:intergenic | 50.0% | |
| TCAGATACTCGAGCAGGAGA+AGG | - | chr3.3:90369426-90369445 | MS.gene75309:intron | 50.0% | |
| TCGATTCTCTGACGAAGCGT+AGG | + | chr3.3:90368292-90368311 | None:intergenic | 50.0% | |
| TCTCTCTGATGTGACGGTAG+AGG | + | chr3.3:90368090-90368109 | None:intergenic | 50.0% | |
| TGACCTGCGGAGCATAAGAT+TGG | + | chr3.3:90369680-90369699 | None:intergenic | 50.0% | |
| TTAGTGGAAGTCGTGACCTG+CGG | + | chr3.3:90369693-90369712 | None:intergenic | 50.0% | |
| TTGCCAATCTTATGCTCCGC+AGG | - | chr3.3:90369674-90369693 | MS.gene75309:CDS | 50.0% | |
| ! | TCAAGCATCTTTGAGGGGAG+GGG | - | chr3.3:90370845-90370864 | MS.gene75309:intron | 50.0% |
| ! | TCACACTGGTCTCAAGTGCT+TGG | - | chr3.3:90369573-90369592 | MS.gene75309:intron | 50.0% |
| !! | CTTCAAAACTGGGCGCTGAA+GGG | + | chr3.3:90371292-90371311 | None:intergenic | 50.0% |
| !! | GCTTTTTGGGAGATGGAGCT+AGG | + | chr3.3:90371591-90371610 | None:intergenic | 50.0% |
| !! | TCTTCAAAACTGGGCGCTGA+AGG | + | chr3.3:90371293-90371312 | None:intergenic | 50.0% |
| !! | TTCAAAACTGGGCGCTGAAG+GGG | + | chr3.3:90371291-90371310 | None:intergenic | 50.0% |
| CGAAGTTGGGATCGTAGCCT+AGG | + | chr3.3:90368036-90368055 | None:intergenic | 55.0% | |
| CGTAGCCTAGGTCTTGAGCT+TGG | + | chr3.3:90368024-90368043 | None:intergenic | 55.0% | |
| CGTCTCCAAGCTCAAGACCT+AGG | - | chr3.3:90368016-90368035 | MS.gene75309:CDS | 55.0% | |
| GACTGGATCGGGAACGAAGT+TGG | + | chr3.3:90368050-90368069 | None:intergenic | 55.0% | |
| GAGTGAGACGAGCATAGAGG+TGG | + | chr3.3:90368270-90368289 | None:intergenic | 55.0% | |
| GGTGGCGAAACCACATCTCA+CGG | + | chr3.3:90368252-90368271 | None:intergenic | 55.0% | |
| TGAGCGACAGCGTCTACGGA+GGG | + | chr3.3:90368193-90368212 | None:intergenic | 60.0% | |
| TTGAGCGACAGCGTCTACGG+AGG | + | chr3.3:90368194-90368213 | None:intergenic | 60.0% | |
| ACAGCGTCTACGGAGGGCCA+TGG | + | chr3.3:90368187-90368206 | None:intergenic | 65.0% | |
| TCTCGCTCTGCCCCCAAAGC+AGG | - | chr3.3:90371132-90371151 | MS.gene75309:intron | 65.0% | |
| !! | GCTTTGGGGGCAGAGCGAGA+GGG | + | chr3.3:90371132-90371151 | None:intergenic | 65.0% |
| !! | TGCTTTGGGGGCAGAGCGAG+AGG | + | chr3.3:90371133-90371152 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 90367998 | 90372993 | 90367998 | ID=MS.gene75309 |
| chr3.3 | mRNA | 90367998 | 90372993 | 90367998 | ID=MS.gene75309.t1;Parent=MS.gene75309 |
| chr3.3 | exon | 90372490 | 90372993 | 90372490 | ID=MS.gene75309.t1.exon1;Parent=MS.gene75309.t1 |
| chr3.3 | CDS | 90372490 | 90372993 | 90372490 | ID=cds.MS.gene75309.t1;Parent=MS.gene75309.t1 |
| chr3.3 | exon | 90371296 | 90371627 | 90371296 | ID=MS.gene75309.t1.exon2;Parent=MS.gene75309.t1 |
| chr3.3 | CDS | 90371296 | 90371627 | 90371296 | ID=cds.MS.gene75309.t1;Parent=MS.gene75309.t1 |
| chr3.3 | exon | 90369657 | 90369996 | 90369657 | ID=MS.gene75309.t1.exon3;Parent=MS.gene75309.t1 |
| chr3.3 | CDS | 90369657 | 90369996 | 90369657 | ID=cds.MS.gene75309.t1;Parent=MS.gene75309.t1 |
| chr3.3 | exon | 90368845 | 90368993 | 90368845 | ID=MS.gene75309.t1.exon4;Parent=MS.gene75309.t1 |
| chr3.3 | CDS | 90368845 | 90368993 | 90368845 | ID=cds.MS.gene75309.t1;Parent=MS.gene75309.t1 |
| chr3.3 | exon | 90368636 | 90368729 | 90368636 | ID=MS.gene75309.t1.exon5;Parent=MS.gene75309.t1 |
| chr3.3 | CDS | 90368636 | 90368729 | 90368636 | ID=cds.MS.gene75309.t1;Parent=MS.gene75309.t1 |
| chr3.3 | exon | 90368201 | 90368272 | 90368201 | ID=MS.gene75309.t1.exon6;Parent=MS.gene75309.t1 |
| chr3.3 | CDS | 90368201 | 90368272 | 90368201 | ID=cds.MS.gene75309.t1;Parent=MS.gene75309.t1 |
| chr3.3 | exon | 90367998 | 90368042 | 90367998 | ID=MS.gene75309.t1.exon7;Parent=MS.gene75309.t1 |
| chr3.3 | CDS | 90367998 | 90368042 | 90367998 | ID=cds.MS.gene75309.t1;Parent=MS.gene75309.t1 |
| Gene Sequence |
| Protein sequence |
