AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene014927

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene014927.t1 MTR_3g105730 99.666 299 1 0 1 299 1 299 0.0 613
MS.gene014927.t1 MTR_3g105730 99.267 273 2 0 27 299 5 277 0.0 560
MS.gene014927.t1 MTR_1g014640 92.150 293 22 1 1 292 44 336 0.0 556
MS.gene014927.t1 MTR_1g013400 92.150 293 22 1 1 292 44 336 0.0 556
MS.gene014927.t1 MTR_3g105730 99.462 186 1 0 1 186 1 186 6.96e-135 381
MS.gene014927.t1 MTR_1g115570 65.918 267 82 3 19 280 75 337 8.36e-128 368
MS.gene014927.t1 MTR_3g091060 61.686 261 100 0 20 280 80 340 9.23e-115 335
MS.gene014927.t1 MTR_4g094208 47.170 265 127 6 23 280 18 276 1.14e-68 215
MS.gene014927.t1 MTR_2g008850 45.660 265 131 6 23 280 22 280 3.00e-68 214
MS.gene014927.t1 MTR_3g074610 42.958 284 155 5 1 280 1 281 4.49e-67 211
MS.gene014927.t1 MTR_5g063940 41.901 284 158 5 1 280 1 281 9.07e-67 210
MS.gene014927.t1 MTR_2g008850 47.500 240 114 5 47 280 1 234 4.25e-66 207
MS.gene014927.t1 MTR_8g463130 45.283 265 137 6 21 280 20 281 7.82e-65 205
MS.gene014927.t1 MTR_8g463130 45.418 251 130 5 34 280 6 253 7.09e-64 202
MS.gene014927.t1 MTR_5g063940 45.570 237 123 4 47 280 1 234 8.75e-63 198
MS.gene014927.t1 MTR_2g078760 43.396 265 142 6 21 280 71 332 1.20e-62 201
MS.gene014927.t1 MTR_2g078760 45.148 237 124 4 47 280 20 253 3.97e-62 197
MS.gene014927.t1 MTR_4g094542 42.857 252 136 5 33 280 117 364 2.69e-59 193
MS.gene014927.t1 MTR_3g464650 41.129 248 133 4 42 280 71 314 4.20e-58 189
MS.gene014927.t1 MTR_3g464700 45.755 212 108 3 42 250 95 302 5.06e-56 184
MS.gene014927.t1 MTR_5g071550 39.216 255 142 4 35 280 124 374 9.09e-54 179
MS.gene014927.t1 MTR_1g050520 40.075 267 146 7 33 287 386 650 1.09e-47 169
MS.gene014927.t1 MTR_5g071550 41.204 216 120 3 35 247 124 335 1.64e-47 163
MS.gene014927.t1 MTR_1g015110 36.424 302 134 7 35 278 240 541 2.00e-46 164
MS.gene014927.t1 MTR_2g078760 41.892 222 121 6 21 237 71 289 3.50e-46 157
MS.gene014927.t1 MTR_3g068200 33.333 312 171 3 19 293 77 388 6.55e-46 159
MS.gene014927.t1 MTR_5g024340 37.500 264 141 7 36 280 87 345 2.06e-45 158
MS.gene014927.t1 MTR_2g040500 32.102 352 148 8 15 278 185 533 1.63e-44 159
MS.gene014927.t1 MTR_4g125810 39.130 253 111 6 65 278 253 501 4.32e-44 157
MS.gene014927.t1 MTR_5g080680 40.351 228 122 3 35 248 102 329 4.82e-44 154
MS.gene014927.t1 MTR_1g086350 33.569 283 153 9 42 294 71 348 8.20e-42 148
MS.gene014927.t1 MTR_3g104710 34.528 307 138 7 35 278 231 537 9.29e-42 151
MS.gene014927.t1 MTR_1g086350 31.464 321 182 10 7 294 49 364 1.12e-41 148
MS.gene014927.t1 MTR_1g086350 33.725 255 144 7 61 294 12 262 3.38e-41 144
MS.gene014927.t1 MTR_4g116420 35.983 239 136 4 56 280 115 350 1.95e-40 145
MS.gene014927.t1 MTR_8g102550 34.694 294 144 10 29 278 97 386 3.26e-40 144
MS.gene014927.t1 MTR_5g009370 35.563 284 149 8 34 284 52 334 7.79e-40 142
MS.gene014927.t1 MTR_3g107880 36.296 270 147 8 32 280 22 287 1.01e-39 141
MS.gene014927.t1 MTR_4g123080 33.942 274 131 9 42 278 82 342 1.17e-39 142
MS.gene014927.t1 MTR_1g028300 38.148 270 140 6 33 278 111 377 1.19e-39 143
MS.gene014927.t1 MTR_4g123080 35.391 243 117 7 64 278 94 324 1.22e-39 142
MS.gene014927.t1 MTR_3g107880 36.296 270 147 8 32 280 79 344 2.92e-39 142
MS.gene014927.t1 MTR_3g107880 36.296 270 147 8 32 280 80 345 3.14e-39 141
MS.gene014927.t1 MTR_2g033000 30.945 307 162 9 9 278 36 329 9.43e-38 137
MS.gene014927.t1 MTR_6g081850 34.420 276 149 8 38 283 48 321 1.18e-37 136
MS.gene014927.t1 MTR_1g014190 31.045 335 155 13 30 294 19 347 1.60e-34 129
MS.gene014927.t1 MTR_1g014190 31.045 335 155 13 30 294 57 385 1.85e-34 129
MS.gene014927.t1 MTR_4g007440 28.329 353 171 10 8 294 5 341 4.58e-34 127
MS.gene014927.t1 MTR_3g105880 29.882 338 161 12 29 296 18 349 7.93e-33 124
MS.gene014927.t1 MTR_3g105880 31.752 274 126 10 30 247 19 287 2.59e-31 119
MS.gene014927.t1 MTR_4g094208 42.424 165 84 5 23 182 18 176 4.25e-30 113
MS.gene014927.t1 MTR_3g491830 27.362 307 167 8 19 277 48 346 1.91e-28 113
MS.gene014927.t1 MTR_5g080680 38.462 182 98 3 35 202 102 283 2.58e-28 110
MS.gene014927.t1 MTR_2g078760 39.394 165 94 5 21 182 71 232 7.71e-28 108
MS.gene014927.t1 MTR_4g118340 29.712 313 167 12 28 293 44 350 1.65e-27 110
MS.gene014927.t1 MTR_1g075730 28.889 225 139 3 56 280 70 273 1.09e-26 105
MS.gene014927.t1 MTR_1g083690 33.750 240 114 11 67 264 91 327 1.19e-26 107
MS.gene014927.t1 MTR_1g075730 29.333 225 142 4 56 280 70 277 1.21e-26 105
MS.gene014927.t1 MTR_7g070510 29.720 286 143 7 65 293 92 376 2.45e-26 107
MS.gene014927.t1 MTR_1g110210 31.373 255 146 10 48 278 46 295 4.80e-26 105
MS.gene014927.t1 MTR_7g112490 30.142 282 137 10 67 291 93 371 8.93e-26 105
MS.gene014927.t1 MTR_7g112490 30.142 282 137 10 67 291 111 389 1.06e-25 105
MS.gene014927.t1 MTR_2g020970 29.206 315 169 12 28 295 45 352 1.49e-25 105
MS.gene014927.t1 MTR_2g020970 29.841 315 167 13 28 294 45 353 1.51e-25 104
MS.gene014927.t1 MTR_7g112430 32.114 246 139 8 54 278 57 295 2.29e-25 105
MS.gene014927.t1 MTR_7g090530 31.474 251 131 7 65 275 69 318 6.95e-25 103
MS.gene014927.t1 MTR_1g019760 31.381 239 140 8 65 284 65 298 3.45e-24 101
MS.gene014927.t1 MTR_1g019760 31.381 239 140 8 65 284 65 298 3.78e-24 101
MS.gene014927.t1 MTR_1g016620 37.634 186 93 6 82 251 114 292 5.06e-24 100
MS.gene014927.t1 MTR_7g029240 34.008 247 137 13 54 278 57 299 7.69e-24 100
MS.gene014927.t1 MTR_4g013295 32.117 274 135 11 60 283 72 344 8.77e-24 99.8
MS.gene014927.t1 MTR_5g071550 37.333 150 88 2 35 182 124 269 1.95e-23 97.4
MS.gene014927.t1 MTR_7g100240 30.522 249 124 8 45 247 47 292 2.06e-23 99.0
MS.gene014927.t1 MTR_4g120410 37.107 159 82 5 125 266 174 331 2.16e-23 98.6
MS.gene014927.t1 MTR_2g435550 30.712 267 137 10 61 280 74 339 2.20e-23 98.6
MS.gene014927.t1 MTR_2g435550 30.712 267 137 10 61 280 88 353 2.23e-23 98.6
MS.gene014927.t1 MTR_2g435550 31.557 244 126 8 61 264 88 330 2.79e-23 98.6
MS.gene014927.t1 MTR_1g083750 29.719 249 147 8 54 281 57 298 4.18e-23 98.6
MS.gene014927.t1 MTR_1g116260 30.662 287 133 11 55 278 69 352 5.25e-23 97.8
MS.gene014927.t1 MTR_3g101540 30.126 239 143 8 65 284 66 299 6.13e-23 98.2
MS.gene014927.t1 MTR_3g101540 30.126 239 143 8 65 284 66 299 6.94e-23 98.2
MS.gene014927.t1 MTR_5g005810 31.142 289 151 13 29 280 294 571 1.17e-22 98.2
MS.gene014927.t1 MTR_1g067210 27.541 305 168 9 31 289 41 338 1.45e-22 96.7
MS.gene014927.t1 MTR_6g087000 29.044 272 148 10 65 292 124 394 2.67e-22 97.4
MS.gene014927.t1 MTR_6g087000 29.044 272 148 10 65 292 124 394 3.43e-22 97.1
MS.gene014927.t1 MTR_1g041475 28.505 214 132 3 67 280 81 273 3.88e-22 93.6
MS.gene014927.t1 MTR_3g032660 29.771 262 135 10 45 264 51 305 3.94e-22 95.9
MS.gene014927.t1 MTR_7g090550 30.502 259 131 9 31 248 42 292 5.49e-22 95.5
MS.gene014927.t1 MTR_3g032700 29.389 262 136 10 45 264 51 305 6.93e-22 95.1
MS.gene014927.t1 MTR_8g074930 29.197 274 129 9 67 278 81 351 1.14e-20 91.3
MS.gene014927.t1 MTR_1g106855 29.932 294 138 11 67 296 63 352 4.80e-20 89.7
MS.gene014927.t1 MTR_1g071370 28.270 237 112 7 100 278 200 436 7.26e-20 90.5
MS.gene014927.t1 MTR_4g037470 29.577 284 137 9 67 290 107 387 2.48e-19 88.2
MS.gene014927.t1 MTR_4g037470 29.577 284 137 9 67 290 98 378 2.94e-19 87.8
MS.gene014927.t1 MTR_2g033910 29.600 250 135 7 60 269 70 318 5.31e-19 86.7
MS.gene014927.t1 MTR_2g090190 31.944 216 120 7 100 291 160 372 1.09e-18 86.3
MS.gene014927.t1 MTR_1g106855 31.556 225 107 9 67 247 63 284 1.16e-18 84.7
MS.gene014927.t1 MTR_1g112840 28.125 224 116 7 67 248 83 303 2.62e-18 84.7
MS.gene014927.t1 MTR_7g080170 28.821 229 135 7 93 294 174 401 3.56e-18 84.7
MS.gene014927.t1 MTR_7g080170 28.821 229 135 7 93 294 66 293 3.82e-18 84.3
MS.gene014927.t1 MTR_4g113480 27.863 262 150 9 47 274 60 316 7.53e-18 84.0
MS.gene014927.t1 MTR_7g060770 29.646 226 115 5 67 248 265 490 9.61e-18 83.6
MS.gene014927.t1 MTR_8g017240 30.833 240 130 8 61 266 82 319 1.18e-17 82.8
MS.gene014927.t1 MTR_0015s0140 28.151 238 132 6 65 264 79 315 1.46e-17 82.4
MS.gene014927.t1 MTR_7g081020 26.316 247 136 7 65 269 76 318 2.49e-17 81.6
MS.gene014927.t1 MTR_7g021530 28.205 273 156 10 19 264 34 293 1.16e-16 79.7
MS.gene014927.t1 MTR_7g081020 26.786 224 119 6 67 248 78 298 1.20e-16 79.3
MS.gene014927.t1 MTR_7g021530 28.205 273 156 10 19 264 84 343 2.65e-16 79.0
MS.gene014927.t1 MTR_7g021530 28.205 273 156 10 19 264 125 384 2.72e-16 79.0
MS.gene014927.t1 MTR_1g083750 29.048 210 120 7 90 281 8 206 3.67e-16 77.8
MS.gene014927.t1 MTR_4g123080 34.109 129 72 3 160 278 104 229 1.68e-15 75.1
MS.gene014927.t1 MTR_4g076560 27.490 251 130 9 67 269 204 450 2.25e-14 73.6
MS.gene014927.t1 MTR_8g074930 28.511 235 110 7 102 278 5 239 3.56e-14 71.6
MS.gene014927.t1 MTR_5g005810 31.188 202 105 10 29 207 294 484 1.46e-12 68.2
MS.gene014927.t1 MTR_4g119830 29.018 224 99 7 126 291 277 498 1.60e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene014927.t1 AT4G31750 88.814 295 32 1 1 295 1 294 0.0 531
MS.gene014927.t1 AT4G31750 88.814 295 32 1 1 295 1 294 0.0 531
MS.gene014927.t1 AT4G31750 88.814 295 32 1 1 295 1 294 0.0 531
MS.gene014927.t1 AT5G24940 82.918 281 47 1 1 281 1 280 1.66e-175 493
MS.gene014927.t1 AT5G10740 81.495 281 51 1 1 281 1 280 6.71e-172 480
MS.gene014927.t1 AT5G10740 81.495 281 51 1 1 281 1 280 6.71e-172 480
MS.gene014927.t1 AT1G43900 63.878 263 89 2 23 280 107 368 6.19e-125 362
MS.gene014927.t1 AT5G53140 55.872 281 123 1 17 296 83 363 1.79e-115 339
MS.gene014927.t1 AT5G53140 55.872 281 123 1 17 296 83 363 1.79e-115 339
MS.gene014927.t1 AT1G78200 45.420 262 139 3 23 280 21 282 6.18e-71 221
MS.gene014927.t1 AT1G78200 45.420 262 139 3 23 280 21 282 6.18e-71 221
MS.gene014927.t1 AT1G78200 45.420 262 139 3 23 280 21 282 6.18e-71 221
MS.gene014927.t1 AT1G78200 46.414 237 124 2 47 280 1 237 1.31e-67 211
MS.gene014927.t1 AT1G78200 46.414 237 124 2 47 280 1 237 1.31e-67 211
MS.gene014927.t1 AT1G34750 44.275 262 139 5 23 280 23 281 3.19e-67 211
MS.gene014927.t1 AT1G34750 44.275 262 139 5 23 280 23 281 3.19e-67 211
MS.gene014927.t1 AT1G34750 44.275 262 139 5 23 280 23 281 3.19e-67 211
MS.gene014927.t1 AT2G20630 45.525 257 129 5 27 280 30 278 2.56e-66 209
MS.gene014927.t1 AT2G20630 44.318 264 136 5 27 287 30 285 6.82e-65 206
MS.gene014927.t1 AT4G28400 44.444 252 133 5 33 280 12 260 3.08e-64 203
MS.gene014927.t1 AT4G28400 44.151 265 140 6 21 280 21 282 4.05e-64 203
MS.gene014927.t1 AT1G22280 44.094 254 135 5 31 280 30 280 5.27e-63 201
MS.gene014927.t1 AT3G15260 45.627 263 135 6 23 280 29 288 6.52e-62 198
MS.gene014927.t1 AT3G15260 45.627 263 135 6 23 280 29 288 6.52e-62 198
MS.gene014927.t1 AT1G22280 43.462 260 134 6 31 280 30 286 3.65e-61 196
MS.gene014927.t1 AT2G34740 43.922 255 134 6 32 281 85 335 7.99e-59 191
MS.gene014927.t1 AT2G40180 40.613 261 136 7 35 280 129 385 1.75e-55 184
MS.gene014927.t1 AT1G07160 40.698 258 137 6 35 280 123 376 7.98e-55 182
MS.gene014927.t1 AT2G30020 41.569 255 134 5 35 278 140 390 1.87e-54 182
MS.gene014927.t1 AT1G34750 44.292 219 115 5 23 237 23 238 1.12e-51 170
MS.gene014927.t1 AT1G67820 42.918 233 119 5 16 244 72 294 1.12e-50 172
MS.gene014927.t1 AT1G67820 42.918 233 119 5 16 244 108 330 2.65e-50 172
MS.gene014927.t1 AT2G40860 38.889 270 144 7 33 287 293 556 1.96e-48 169
MS.gene014927.t1 AT2G40860 38.889 270 144 7 33 287 391 654 2.72e-48 171
MS.gene014927.t1 AT3G51470 39.847 261 140 7 33 280 27 283 3.30e-48 163
MS.gene014927.t1 AT3G51470 39.847 261 140 7 33 280 71 327 5.84e-48 164
MS.gene014927.t1 AT4G28400 42.342 222 120 6 21 237 21 239 4.68e-46 156
MS.gene014927.t1 AT5G57050 37.793 299 129 11 35 278 73 369 1.83e-45 158
MS.gene014927.t1 AT5G57050 37.793 299 129 11 35 278 113 409 2.65e-45 159
MS.gene014927.t1 AT3G62260 33.548 310 172 8 6 285 50 355 4.53e-45 157
MS.gene014927.t1 AT3G62260 35.766 274 142 8 42 285 85 354 1.47e-44 155
MS.gene014927.t1 AT4G26080 37.500 296 129 10 35 278 129 420 1.79e-44 157
MS.gene014927.t1 AT3G62260 36.059 269 138 8 47 285 1 265 3.80e-44 152
MS.gene014927.t1 AT2G33700 39.207 227 124 5 64 280 122 344 7.79e-44 154
MS.gene014927.t1 AT2G34740 41.395 215 117 6 32 241 81 291 2.94e-43 150
MS.gene014927.t1 AT2G34740 41.395 215 117 6 32 241 99 309 3.00e-43 150
MS.gene014927.t1 AT2G40860 37.600 250 136 6 33 267 391 635 1.19e-42 155
MS.gene014927.t1 AT5G59220 39.224 232 123 3 35 248 112 343 1.73e-42 151
MS.gene014927.t1 AT1G07430 39.662 237 118 6 35 248 121 355 1.75e-42 151
MS.gene014927.t1 AT2G25620 37.262 263 134 6 42 278 97 354 9.03e-42 149
MS.gene014927.t1 AT2G25620 37.262 263 134 6 42 278 97 354 9.03e-42 149
MS.gene014927.t1 AT2G29380 35.915 284 139 8 35 278 78 358 1.68e-40 144
MS.gene014927.t1 AT3G11410 37.815 238 123 4 36 248 106 343 8.09e-40 144
MS.gene014927.t1 AT5G51760 32.036 334 166 6 2 278 50 379 2.53e-39 142
MS.gene014927.t1 AT3G17250 35.537 242 128 6 63 280 156 393 2.59e-39 142
MS.gene014927.t1 AT1G17550 33.654 312 138 8 35 278 189 499 2.84e-39 144
MS.gene014927.t1 AT1G17550 33.654 312 138 8 35 278 189 499 2.84e-39 144
MS.gene014927.t1 AT5G51760 32.036 334 166 6 2 278 80 409 3.84e-39 142
MS.gene014927.t1 AT1G48040 37.398 246 114 6 64 280 115 349 2.84e-38 139
MS.gene014927.t1 AT1G72770 33.866 313 135 8 35 278 190 499 7.31e-38 140
MS.gene014927.t1 AT1G72770 33.866 313 135 8 35 278 190 499 7.31e-38 140
MS.gene014927.t1 AT1G72770 33.866 313 135 8 35 278 190 499 7.31e-38 140
MS.gene014927.t1 AT1G18030 33.333 273 150 10 38 280 78 348 6.55e-34 127
MS.gene014927.t1 AT2G25070 28.947 342 165 10 4 280 1 329 2.17e-32 123
MS.gene014927.t1 AT2G25070 28.947 342 165 10 4 280 1 329 2.17e-32 123
MS.gene014927.t1 AT4G31860 30.380 316 150 10 30 280 19 329 1.89e-31 120
MS.gene014927.t1 AT3G16800 34.599 237 122 6 61 264 89 325 3.70e-30 117
MS.gene014927.t1 AT3G16800 34.599 237 122 6 61 264 89 325 3.70e-30 117
MS.gene014927.t1 AT3G16800 34.599 237 122 6 61 264 89 325 3.70e-30 117
MS.gene014927.t1 AT2G40860 36.190 210 115 5 33 228 391 595 4.44e-30 119
MS.gene014927.t1 AT3G16800 34.783 230 117 6 68 264 1 230 1.13e-29 113
MS.gene014927.t1 AT3G16800 34.783 230 117 6 68 264 1 230 1.13e-29 113
MS.gene014927.t1 AT4G08260 33.937 221 108 5 64 278 18 206 1.35e-29 112
MS.gene014927.t1 AT4G31860 31.752 274 126 9 30 247 19 287 3.30e-29 113
MS.gene014927.t1 AT4G27800 28.990 307 162 9 19 277 47 345 1.40e-28 113
MS.gene014927.t1 AT1G18030 34.222 225 121 7 38 237 78 300 3.01e-28 110
MS.gene014927.t1 AT1G22280 40.909 154 86 4 31 182 30 180 4.01e-28 107
MS.gene014927.t1 AT1G68410 33.047 233 132 8 65 278 73 300 1.61e-27 111
MS.gene014927.t1 AT1G68410 33.047 233 132 8 65 278 73 300 1.61e-27 111
MS.gene014927.t1 AT1G68410 33.047 233 132 8 65 278 73 300 1.61e-27 111
MS.gene014927.t1 AT1G68410 33.047 233 132 8 65 278 73 300 1.61e-27 111
MS.gene014927.t1 AT4G32950 37.963 216 108 9 64 256 71 283 4.22e-27 108
MS.gene014927.t1 AT5G57050 38.191 199 92 9 35 204 113 309 5.55e-27 107
MS.gene014927.t1 AT5G27930 32.645 242 115 9 67 264 94 331 1.03e-26 108
MS.gene014927.t1 AT5G27930 32.645 242 115 9 67 264 94 331 1.03e-26 108
MS.gene014927.t1 AT3G05640 33.725 255 128 11 67 280 95 349 1.60e-26 107
MS.gene014927.t1 AT3G05640 33.725 255 128 11 67 280 95 349 1.60e-26 107
MS.gene014927.t1 AT3G05640 33.725 255 128 11 67 280 95 349 1.60e-26 107
MS.gene014927.t1 AT4G31860 32.061 262 117 9 30 235 19 275 1.97e-26 105
MS.gene014927.t1 AT4G27800 29.197 274 142 8 19 248 47 312 5.94e-26 105
MS.gene014927.t1 AT4G27800 29.197 274 142 8 19 248 47 312 7.68e-26 104
MS.gene014927.t1 AT5G59220 36.216 185 100 3 35 201 112 296 1.10e-25 103
MS.gene014927.t1 AT1G09160 30.894 246 142 9 54 278 57 295 1.26e-25 105
MS.gene014927.t1 AT1G09160 30.894 246 142 9 54 278 57 295 1.26e-25 105
MS.gene014927.t1 AT5G02760 30.451 266 135 9 26 247 32 291 2.18e-25 104
MS.gene014927.t1 AT1G47380 30.932 236 139 8 65 281 64 294 1.13e-24 103
MS.gene014927.t1 AT3G63320 27.273 319 134 8 62 283 66 383 3.47e-24 101
MS.gene014927.t1 AT5G19280 31.206 282 153 11 33 280 303 577 8.47e-24 101
MS.gene014927.t1 AT5G26010 35.681 213 105 8 65 247 73 283 1.66e-23 98.6
MS.gene014927.t1 AT2G20050 31.373 255 132 10 65 278 143 395 2.02e-23 100
MS.gene014927.t1 AT2G20050 31.373 255 132 10 65 278 143 395 2.36e-23 100
MS.gene014927.t1 AT3G06270 27.817 284 162 10 37 280 62 342 5.39e-23 97.4
MS.gene014927.t1 AT3G27140 31.513 238 105 4 47 278 1 186 9.58e-23 94.7
MS.gene014927.t1 AT3G23360 29.596 223 117 5 63 280 72 259 2.33e-22 94.0
MS.gene014927.t1 AT3G63340 30.081 246 112 8 100 286 207 451 4.01e-22 96.7
MS.gene014927.t1 AT3G63340 30.081 246 112 8 100 286 207 451 7.16e-22 96.3
MS.gene014927.t1 AT3G63340 30.081 246 112 8 100 286 207 451 7.62e-22 96.3
MS.gene014927.t1 AT3G63340 30.081 246 112 8 100 286 207 451 8.46e-22 95.9
MS.gene014927.t1 AT3G63340 30.081 246 112 8 100 286 207 451 8.46e-22 95.9
MS.gene014927.t1 AT3G63340 30.081 246 112 8 100 286 207 451 8.54e-22 95.9
MS.gene014927.t1 AT3G63340 30.081 246 112 8 100 286 207 451 9.12e-22 95.9
MS.gene014927.t1 AT3G63340 30.081 246 112 8 100 286 207 451 9.12e-22 95.9
MS.gene014927.t1 AT3G63340 30.081 246 112 8 100 286 207 451 9.12e-22 95.9
MS.gene014927.t1 AT3G63340 30.081 246 112 8 100 286 207 451 9.12e-22 95.9
MS.gene014927.t1 AT5G01700 32.707 266 125 11 67 284 31 290 9.99e-22 93.6
MS.gene014927.t1 AT3G17090 31.818 242 125 7 67 269 86 326 1.09e-21 94.4
MS.gene014927.t1 AT3G63320 29.630 243 111 7 100 283 59 300 1.87e-21 93.6
MS.gene014927.t1 AT5G01700 32.463 268 127 11 65 284 78 339 1.94e-21 93.6
MS.gene014927.t1 AT3G17090 32.273 220 110 6 67 247 86 305 3.55e-21 92.0
MS.gene014927.t1 AT3G51370 27.018 285 143 8 65 287 79 360 4.75e-21 92.4
MS.gene014927.t1 AT3G51370 27.018 285 143 8 65 287 79 360 4.75e-21 92.4
MS.gene014927.t1 AT4G32950 37.306 193 97 8 65 234 72 263 6.30e-21 90.5
MS.gene014927.t1 AT3G12620 28.912 294 143 10 60 291 78 367 1.09e-20 91.7
MS.gene014927.t1 AT3G12620 28.912 294 143 10 60 291 78 367 1.09e-20 91.7
MS.gene014927.t1 AT3G55050 29.710 276 129 10 65 278 84 356 2.29e-20 90.5
MS.gene014927.t1 AT3G55050 29.710 276 129 10 65 278 84 356 2.29e-20 90.5
MS.gene014927.t1 AT4G33920 29.758 289 135 12 67 290 63 348 2.71e-20 90.5
MS.gene014927.t1 AT1G79630 31.556 225 128 6 93 293 119 341 2.98e-20 90.5
MS.gene014927.t1 AT1G79630 31.556 225 128 6 93 293 119 341 2.98e-20 90.5
MS.gene014927.t1 AT1G79630 31.556 225 128 6 93 293 189 411 3.65e-20 90.9
MS.gene014927.t1 AT1G72770 33.023 215 93 6 35 201 190 401 3.65e-20 90.1
MS.gene014927.t1 AT1G72770 33.023 215 93 6 35 201 190 401 3.65e-20 90.1
MS.gene014927.t1 AT1G79630 31.556 225 128 6 93 293 185 407 4.32e-20 90.5
MS.gene014927.t1 AT1G79630 31.556 225 128 6 93 293 79 301 5.24e-20 89.7
MS.gene014927.t1 AT1G79630 31.556 225 128 6 93 293 79 301 5.24e-20 89.7
MS.gene014927.t1 AT1G79630 31.556 225 128 6 93 293 79 301 5.24e-20 89.7
MS.gene014927.t1 AT1G79630 31.556 225 128 6 93 293 79 301 5.24e-20 89.7
MS.gene014927.t1 AT5G66080 29.388 245 127 7 67 269 84 324 9.94e-20 88.6
MS.gene014927.t1 AT2G05050 28.151 238 114 5 47 278 1 187 1.72e-19 84.7
MS.gene014927.t1 AT5G06750 28.279 244 124 7 67 264 84 322 2.02e-19 87.8
MS.gene014927.t1 AT5G06750 28.279 244 124 7 67 264 84 322 2.02e-19 87.8
MS.gene014927.t1 AT1G03590 28.621 290 146 9 63 294 88 374 5.24e-19 87.0
MS.gene014927.t1 AT4G03415 31.535 241 110 9 61 247 93 332 2.36e-18 85.5
MS.gene014927.t1 AT4G03415 31.535 241 110 9 61 247 93 332 2.36e-18 85.5
MS.gene014927.t1 AT4G03415 31.535 241 110 9 61 247 93 332 2.36e-18 85.5
MS.gene014927.t1 AT4G38520 25.806 279 142 8 67 283 83 358 4.03e-18 84.3
MS.gene014927.t1 AT4G38520 25.806 279 142 8 67 283 83 358 4.03e-18 84.3
MS.gene014927.t1 AT5G36250 28.837 215 124 7 70 266 160 363 8.80e-18 83.6
MS.gene014927.t1 AT1G16220 29.717 212 126 5 93 282 166 376 1.21e-17 83.2
MS.gene014927.t1 AT3G02750 32.203 177 102 5 88 247 178 353 5.38e-17 81.3
MS.gene014927.t1 AT3G02750 32.203 177 102 5 88 247 178 353 5.38e-17 81.3
MS.gene014927.t1 AT3G63340 35.616 146 77 5 157 286 340 484 1.28e-15 77.8
MS.gene014927.t1 AT3G51370 27.907 215 103 5 125 287 61 275 3.38e-15 74.7
MS.gene014927.t1 AT3G16560 25.075 335 153 14 52 291 160 491 4.67e-13 69.7
MS.gene014927.t1 AT3G16560 25.075 335 153 14 52 291 160 491 4.67e-13 69.7
MS.gene014927.t1 AT3G16560 25.075 335 153 14 52 291 160 491 4.67e-13 69.7
MS.gene014927.t1 AT3G16560 26.280 293 139 13 52 270 160 449 5.46e-13 69.3
MS.gene014927.t1 AT5G36250 28.495 186 104 7 70 237 160 334 5.97e-12 65.9

Find 70 sgRNAs with CRISPR-Local

Find 164 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTCTAGAGTTTCTTATTC+TGG 0.200352 3.1:+83481920 MS.gene014927:CDS
TAGACATATACCTGGATTTC+TGG 0.210715 3.1:-83481515 None:intergenic
TTCTGGCCAGTGACGGGCTT+TGG 0.240299 3.1:+83481937 MS.gene014927:CDS
TCTAACTGTGGCCGGCAAAT+TGG 0.294225 3.1:-83482291 None:intergenic
GAACATACCTATTGCTGATT+TGG 0.300676 3.1:-83480713 None:intergenic
TTGGTGTCAGAAATGAATTT+TGG 0.312849 3.1:-83480694 None:intergenic
TCTGGCCAGTGACGGGCTTT+GGG 0.337499 3.1:+83481938 MS.gene014927:CDS
TCCTTTGCCTCTCATCAGTT+TGG 0.338012 3.1:-83481303 None:intergenic
CGGTCAGCGGTGGCGGTCTC+AGG 0.349611 3.1:+83479420 MS.gene014927:CDS
CTTGCTGTCTCTCGTGCATT+TGG 0.353349 3.1:+83481458 MS.gene014927:CDS
TGCCTCTCATCAGTTTGGTC+TGG 0.356443 3.1:-83481298 None:intergenic
AATTTGCCGGCCACAGTTAG+AGG 0.373882 3.1:+83482293 MS.gene014927:CDS
GCCTCCTCTGCATCTTCAAT+CGG 0.383558 3.1:-83482157 None:intergenic
ACCATCAACACCGTCAATTC+TGG 0.393237 3.1:-83480138 None:intergenic
TCCATTGAAGATCTCTTGCC+AGG 0.411700 3.1:-83480101 None:intergenic
CAAACGATCGCCAACTAGAA+TGG 0.427351 3.1:-83480895 None:intergenic
TTCTTATTCTGGCCAGTGAC+GGG 0.427831 3.1:+83481931 MS.gene014927:CDS
TTGCAAATGTTGGAGACTCC+AGG 0.434546 3.1:+83480922 MS.gene014927:CDS
ATGCAGGAGGCTTTGTTATG+TGG 0.443560 3.1:+83481332 MS.gene014927:CDS
CACAATGGAAAGTTTAGCTA+TGG 0.445062 3.1:+83480065 MS.gene014927:CDS
AGTAGCTCCAACCAATTTGC+CGG 0.445567 3.1:+83482280 MS.gene014927:CDS
GATGGACCGGTCAGCGGTGG+CGG 0.451633 3.1:+83479413 MS.gene014927:CDS
CGTTTGCTTGTTGCAAATGT+TGG 0.452880 3.1:+83480912 MS.gene014927:CDS
TCTGACACCAAATCAGCAAT+AGG 0.457163 3.1:+83480706 MS.gene014927:CDS
TATGGGTATGCTAGCTCGCC+TGG 0.469009 3.1:+83480083 MS.gene014927:CDS
TGATTTCAGATATTCATTGT+CGG 0.476407 3.1:-83480829 None:intergenic
TTTACAGGAACTTGGAGAGT+TGG 0.480844 3.1:+83481428 MS.gene014927:intron
GACATCCCAAAGCCCGTCAC+TGG 0.487456 3.1:-83481943 None:intergenic
GGAGGCTTTGTTATGTGGGC+TGG 0.490873 3.1:+83481337 MS.gene014927:CDS
GTTATATGCAGAGGCGGTAA+TGG 0.491548 3.1:+83480948 MS.gene014927:CDS
ACAGGAACTTGGAGAGTTGG+AGG 0.510331 3.1:+83481431 MS.gene014927:intron
ACCAGAATTGACGGTGTTGA+TGG 0.510608 3.1:+83480137 MS.gene014927:CDS
GCCTCTGCATATAACGGCCC+TGG 0.511126 3.1:-83480940 None:intergenic
TTTCTTATTCTGGCCAGTGA+CGG 0.511376 3.1:+83481930 MS.gene014927:CDS
GCCTGGCAAGAGATCTTCAA+TGG 0.518466 3.1:+83480100 MS.gene014927:CDS
TGTTGCTGATCCAGAAATCC+AGG 0.527506 3.1:+83481505 MS.gene014927:CDS
AGGCAAAGGATTGAAGATGC+AGG 0.531055 3.1:+83481316 MS.gene014927:CDS
AACAACCATCACAAAGATGC+AGG 0.531101 3.1:+83480855 MS.gene014927:CDS
TGCAGGAGGCTTTGTTATGT+GGG 0.535770 3.1:+83481333 MS.gene014927:CDS
TACTATGAGAAGAAGTGCCT+TGG 0.536105 3.1:-83482261 None:intergenic
TTGGGATGTCGTCTCAAATG+AGG 0.536571 3.1:+83481956 MS.gene014927:CDS
GGTGTTGATGGTGAAATTGT+TGG 0.538738 3.1:+83480149 MS.gene014927:CDS
CTGAGACCGCCACCGCTGAC+CGG 0.540884 3.1:-83479419 None:intergenic
GCATCTACCGCCATTCTAGT+TGG 0.543601 3.1:+83480885 MS.gene014927:CDS
TACCATCAAAGACTCCGAAA+AGG 0.557789 3.1:-83480172 None:intergenic
CAGGTCCGTGCTATAGATGA+TGG 0.565112 3.1:+83479395 MS.gene014927:CDS
ACTGTGGCCGGCAAATTGGT+TGG 0.565632 3.1:-83482287 None:intergenic
TAGATCCTGCATCTTTGTGA+TGG 0.566925 3.1:-83480860 None:intergenic
CATCATCTATAGCACGGACC+TGG 0.569833 3.1:-83479394 None:intergenic
ACCAAACTGATGAGAGGCAA+AGG 0.577056 3.1:+83481302 MS.gene014927:CDS
ATTACCGCCTCTGCATATAA+CGG 0.580883 3.1:-83480946 None:intergenic
CCGTGCTATAGATGATGGAC+CGG 0.584948 3.1:+83479400 MS.gene014927:CDS
ACAAACCCTCTAACTGTGGC+CGG 0.590068 3.1:-83482299 None:intergenic
AGCACGGACCTGGCTTGTTG+AGG 0.592387 3.1:-83479384 None:intergenic
ACAATGGAAAGTTTAGCTAT+GGG 0.597313 3.1:+83480066 MS.gene014927:CDS
TGCAAATGTTGGAGACTCCA+GGG 0.600937 3.1:+83480923 MS.gene014927:CDS
GTTCGTTTCTTGATGAACCA+AGG 0.602297 3.1:+83482244 MS.gene014927:CDS
ACCGATTGAAGATGCAGAGG+AGG 0.613212 3.1:+83482156 MS.gene014927:CDS
TCCAGGGCCGTTATATGCAG+AGG 0.616040 3.1:+83480939 MS.gene014927:CDS
GATGATGGACCGGTCAGCGG+TGG 0.621402 3.1:+83479410 MS.gene014927:CDS
ATGCACAAACCCTCTAACTG+TGG 0.622547 3.1:-83482303 None:intergenic
ATAGATGATGGACCGGTCAG+CGG 0.638923 3.1:+83479407 MS.gene014927:CDS
AGCCAGACCAAACTGATGAG+AGG 0.656558 3.1:+83481296 MS.gene014927:CDS
CCGGTCCATCATCTATAGCA+CGG 0.659296 3.1:-83479400 None:intergenic
TAAACCGATTGAAGATGCAG+AGG 0.660296 3.1:+83482153 MS.gene014927:CDS
ATTTGTACATGTAGTCACAA+TGG 0.664058 3.1:+83480050 MS.gene014927:intron
CAAAGGATTGAAGATGCAGG+AGG 0.695208 3.1:+83481319 MS.gene014927:CDS
AGGGCCGTTATATGCAGAGG+CGG 0.697345 3.1:+83480942 MS.gene014927:CDS
ACGATCGCCAACTAGAATGG+CGG 0.716614 3.1:-83480892 None:intergenic
ATGCAAGAAGCATATCAGAG+AGG 0.726307 3.1:+83482193 MS.gene014927:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGATAAATATTATTTTTAC+AGG + chr3.1:83481413-83481432 MS.gene014927:intron 10.0%
!! AACTTAATTATTTCGAATTT+AGG - chr3.1:83482023-83482042 None:intergenic 15.0%
!! AATATGAAATAATTCTTACA+CGG - chr3.1:83480570-83480589 None:intergenic 15.0%
!! TTATAGACAAGTTTATATAT+AGG - chr3.1:83480600-83480619 None:intergenic 15.0%
!!! AAATTTTATACATAAGTTGT+GGG + chr3.1:83479920-83479939 MS.gene014927:intron 15.0%
!!! TAAATTTTATACATAAGTTG+TGG + chr3.1:83479919-83479938 MS.gene014927:intron 15.0%
!! ACAAGGTTAATTATAGAATA+AGG - chr3.1:83481694-83481713 None:intergenic 20.0%
!! ACTAAACAATTATTCCTATA+TGG - chr3.1:83480516-83480535 None:intergenic 20.0%
!! GTGTAAGAATTATTTCATAT+TGG + chr3.1:83480569-83480588 MS.gene014927:intron 20.0%
!! TTAATTATTTCGAATTTAGG+TGG - chr3.1:83482020-83482039 None:intergenic 20.0%
!!! ATATTATTTTTACAGGAACT+TGG + chr3.1:83481420-83481439 MS.gene014927:intron 20.0%
!!! CTTCTAGTTAAAAACTAATT+TGG + chr3.1:83481734-83481753 MS.gene014927:intron 20.0%
!!! TAACATTTTAAGCATTTTTC+AGG + chr3.1:83482114-83482133 MS.gene014927:intron 20.0%
! AAGTTATCTTCGTAGATTTA+TGG + chr3.1:83481625-83481644 MS.gene014927:intron 25.0%
! ATAATATCTTGAATGCATGT+TGG - chr3.1:83479517-83479536 None:intergenic 25.0%
! ATTTATGGAATATGTGGATA+AGG + chr3.1:83481640-83481659 MS.gene014927:intron 25.0%
! CGAAAAATTGAATACGTTAA+CGG + chr3.1:83479792-83479811 MS.gene014927:intron 25.0%
! GAAAAGCAAGAGTTATTATA+TGG - chr3.1:83480786-83480805 None:intergenic 25.0%
! GCTTAAAATGTTAAACAAGT+TGG - chr3.1:83482107-83482126 None:intergenic 25.0%
! GTTCAAAAATAACAACAAAG+AGG - chr3.1:83480482-83480501 None:intergenic 25.0%
! TAAGGATAAATGACAAACAT+TGG - chr3.1:83481676-83481695 None:intergenic 25.0%
! TCATGTATGATCTTTATTCT+GGG + chr3.1:83481809-83481828 MS.gene014927:intron 25.0%
! TGATTTCAGATATTCATTGT+CGG - chr3.1:83480832-83480851 None:intergenic 25.0%
! TTACAATTGTTACTAGTTCA+TGG - chr3.1:83481774-83481793 None:intergenic 25.0%
! TTATTCCTATATGGAATAAC+TGG - chr3.1:83480507-83480526 None:intergenic 25.0%
! TTTCCATTGCTTACAATATT+CGG + chr3.1:83480329-83480348 MS.gene014927:intron 25.0%
!! AAAAAACTAGTCTGTGTTAT+AGG + chr3.1:83479852-83479871 MS.gene014927:intron 25.0%
!! AACTTGTCTATAACTCTTTT+AGG + chr3.1:83480607-83480626 MS.gene014927:intron 25.0%
!! ATATGCAAATCAACACATTT+TGG - chr3.1:83479470-83479489 None:intergenic 25.0%
!! CAATTTTCTCCTTAGATTAT+AGG + chr3.1:83479762-83479781 MS.gene014927:intron 25.0%
!! CGTTAACGTATTCAATTTTT+CGG - chr3.1:83479794-83479813 None:intergenic 25.0%
!! TATTCAAGAGAAAGTTGTTT+TGG - chr3.1:83479709-83479728 None:intergenic 25.0%
!! TGTAAGCAATGGAAAATTTT+TGG - chr3.1:83480324-83480343 None:intergenic 25.0%
!!! ATTCAAGAGAAAGTTGTTTT+GGG - chr3.1:83479708-83479727 None:intergenic 25.0%
!!! TTGGATTCATTCATTGATTT+GGG + chr3.1:83479967-83479986 MS.gene014927:intron 25.0%
!!! TTTCTCTAATTTTTTTCTCC+TGG + chr3.1:83480207-83480226 MS.gene014927:intron 25.0%
AAGTAGTTGTACACAAAAGA+TGG + chr3.1:83479633-83479652 MS.gene014927:intron 30.0%
ACAATGGAAAGTTTAGCTAT+GGG + chr3.1:83480066-83480085 MS.gene014927:CDS 30.0%
ATTTGTACATGTAGTCACAA+TGG + chr3.1:83480050-83480069 MS.gene014927:intron 30.0%
CAAAAATAACAACAAAGAGG+AGG - chr3.1:83480479-83480498 None:intergenic 30.0%
CATTCTACTTCTACATAAGA+AGG - chr3.1:83481213-83481232 None:intergenic 30.0%
CCAACAAAAGGTTTGTAAAT+TGG - chr3.1:83480431-83480450 None:intergenic 30.0%
CCTTCAAAAAAATTCTTTCG+CGG - chr3.1:83480404-83480423 None:intergenic 30.0%
CTCAAAAATGCTATTGTACA+AGG - chr3.1:83481711-83481730 None:intergenic 30.0%
GTCATGTATGATCTTTATTC+TGG + chr3.1:83481808-83481827 MS.gene014927:intron 30.0%
TATTTCGAATTTAGGTGGTT+AGG - chr3.1:83482015-83482034 None:intergenic 30.0%
TCGTAGATTTATGGAATATG+TGG + chr3.1:83481634-83481653 MS.gene014927:intron 30.0%
TTTCCGAATATTGTAAGCAA+TGG - chr3.1:83480335-83480354 None:intergenic 30.0%
! ATTCCCTTGTGAAAGATTTT+CGG - chr3.1:83480256-83480275 None:intergenic 30.0%
! CCAATTTACAAACCTTTTGT+TGG + chr3.1:83480428-83480447 MS.gene014927:intron 30.0%
! CTTGGATTCATTCATTGATT+TGG + chr3.1:83479966-83479985 MS.gene014927:intron 30.0%
! TACTTTTAGACATCATTGCT+TGG + chr3.1:83479948-83479967 MS.gene014927:intron 30.0%
! TTTTATGAGACCAGAATTGA+CGG + chr3.1:83480128-83480147 MS.gene014927:CDS 30.0%
!! TCTATAACTCTTTTAGGTCA+TGG + chr3.1:83480613-83480632 MS.gene014927:intron 30.0%
!! TGGATTCATTCATTGATTTG+GGG + chr3.1:83479968-83479987 MS.gene014927:intron 30.0%
!! TGGTGTCAGAAATGAATTTT+GGG - chr3.1:83480696-83480715 None:intergenic 30.0%
!! TTCTCTAGAGTTTCTTATTC+TGG + chr3.1:83481920-83481939 MS.gene014927:CDS 30.0%
!!! TTGGTGTCAGAAATGAATTT+TGG - chr3.1:83480697-83480716 None:intergenic 30.0%
AACCATAGTAGACATATACC+TGG - chr3.1:83481526-83481545 None:intergenic 35.0%
AACCTCCAGTTATTCCATAT+AGG + chr3.1:83480499-83480518 MS.gene014927:intron 35.0%
ACAAACAGACTCATGTACAA+AGG - chr3.1:83481602-83481621 None:intergenic 35.0%
ATCCAGGTATATGTCTACTA+TGG + chr3.1:83481521-83481540 MS.gene014927:intron 35.0%
ATGATTATATGCATCAGCTG+TGG - chr3.1:83480808-83480827 None:intergenic 35.0%
ATGCATGTTGGCAAATGATA+CGG - chr3.1:83479505-83479524 None:intergenic 35.0%
ATGCCGAAAATCTTTCACAA+GGG + chr3.1:83480250-83480269 MS.gene014927:intron 35.0%
CACAATGGAAAGTTTAGCTA+TGG + chr3.1:83480065-83480084 MS.gene014927:CDS 35.0%
CCACATGAAATAGTCAAGAA+TGG - chr3.1:83481557-83481576 None:intergenic 35.0%
CCATTCTTGACTATTTCATG+TGG + chr3.1:83481554-83481573 MS.gene014927:intron 35.0%
GTTACTAGTTCATGGCAAAT+TGG - chr3.1:83481766-83481785 None:intergenic 35.0%
TAGACATATACCTGGATTTC+TGG - chr3.1:83481518-83481537 None:intergenic 35.0%
TATGCCGAAAATCTTTCACA+AGG + chr3.1:83480249-83480268 MS.gene014927:intron 35.0%
TCAAAAAAATTCTTTCGCGG+TGG - chr3.1:83480401-83480420 None:intergenic 35.0%
TCTTGTCTTTAGCCAACAAA+AGG - chr3.1:83480443-83480462 None:intergenic 35.0%
TGTTAGTGCACGAGTAAAAA+TGG + chr3.1:83481115-83481134 MS.gene014927:intron 35.0%
TTAAGTTCCTCTAGTAGAGT+TGG + chr3.1:83482036-83482055 MS.gene014927:intron 35.0%
TTCCTATATGGAATAACTGG+AGG - chr3.1:83480504-83480523 None:intergenic 35.0%
TTTCCAATCAAAATTCGACC+AGG - chr3.1:83480228-83480247 None:intergenic 35.0%
! CATGACATTTTCAGAACTCA+AGG - chr3.1:83482066-83482085 None:intergenic 35.0%
! GAACATACCTATTGCTGATT+TGG - chr3.1:83480716-83480735 None:intergenic 35.0%
! TCTTACACGGTTTATTTCTC+AGG - chr3.1:83480557-83480576 None:intergenic 35.0%
! TTGCATGATTGTGATTTTGC+AGG + chr3.1:83481881-83481900 MS.gene014927:intron 35.0%
!! ATAACTCTTTTAGGTCATGG+CGG + chr3.1:83480616-83480635 MS.gene014927:intron 35.0%
!! GGATTCATTCATTGATTTGG+GGG + chr3.1:83479969-83479988 MS.gene014927:intron 35.0%
!!! CCGCGAAAGAATTTTTTTGA+AGG + chr3.1:83480401-83480420 MS.gene014927:intron 35.0%
AACAACCATCACAAAGATGC+AGG + chr3.1:83480855-83480874 MS.gene014927:CDS 40.0%
AGTGCACGAGTAAAAATGGT+AGG + chr3.1:83481119-83481138 MS.gene014927:intron 40.0%
ATTACCGCCTCTGCATATAA+CGG - chr3.1:83480949-83480968 None:intergenic 40.0%
CGGACACAACCTATAATCTA+AGG - chr3.1:83479774-83479793 None:intergenic 40.0%
CTAGTCTGTGTTATAGGTTG+AGG + chr3.1:83479858-83479877 MS.gene014927:intron 40.0%
GTGCACGAGTAAAAATGGTA+GGG + chr3.1:83481120-83481139 MS.gene014927:intron 40.0%
GTTCGTTTCTTGATGAACCA+AGG + chr3.1:83482244-83482263 MS.gene014927:CDS 40.0%
TAAACCGATTGAAGATGCAG+AGG + chr3.1:83482153-83482172 MS.gene014927:CDS 40.0%
TACCATCAAAGACTCCGAAA+AGG - chr3.1:83480175-83480194 None:intergenic 40.0%
TAGATCCTGCATCTTTGTGA+TGG - chr3.1:83480863-83480882 None:intergenic 40.0%
TCTGACACCAAATCAGCAAT+AGG + chr3.1:83480706-83480725 MS.gene014927:CDS 40.0%
TTAGGTGGTTAGGATGTGAA+AGG - chr3.1:83482005-83482024 None:intergenic 40.0%
TTCACAAGGGAATCATGTCA+TGG + chr3.1:83480263-83480282 MS.gene014927:intron 40.0%
TTTACAGGAACTTGGAGAGT+TGG + chr3.1:83481428-83481447 MS.gene014927:intron 40.0%
TTTCTTATTCTGGCCAGTGA+CGG + chr3.1:83481930-83481949 MS.gene014927:CDS 40.0%
! ATGCAAGAAGCATATCAGAG+AGG + chr3.1:83482193-83482212 MS.gene014927:CDS 40.0%
! CGTTTGCTTGTTGCAAATGT+TGG + chr3.1:83480912-83480931 MS.gene014927:CDS 40.0%
! TACAAGAAAGCACGATTGGA+AGG - chr3.1:83481251-83481270 None:intergenic 40.0%
! TTGCTACAAGAAAGCACGAT+TGG - chr3.1:83481255-83481274 None:intergenic 40.0%
!! CATTGATTTGGGGGAAAAGA+GGG + chr3.1:83479978-83479997 MS.gene014927:intron 40.0%
!! GGTGTTGATGGTGAAATTGT+TGG + chr3.1:83480149-83480168 MS.gene014927:CDS 40.0%
!! TACTATGAGAAGAAGTGCCT+TGG - chr3.1:83482264-83482283 None:intergenic 40.0%
!! TCATTGATTTGGGGGAAAAG+AGG + chr3.1:83479977-83479996 MS.gene014927:intron 40.0%
!! TCTCCTGGTCGAATTTTGAT+TGG + chr3.1:83480222-83480241 MS.gene014927:intron 40.0%
!!! AGCATTTTTCAGGAAGCTGT+TGG + chr3.1:83482124-83482143 MS.gene014927:intron 40.0%
!!! GGTGAAATTGTTGGCCTTTT+CGG + chr3.1:83480158-83480177 MS.gene014927:CDS 40.0%
ACCAAACTGATGAGAGGCAA+AGG + chr3.1:83481302-83481321 MS.gene014927:CDS 45.0%
ACCATCAACACCGTCAATTC+TGG - chr3.1:83480141-83480160 None:intergenic 45.0%
AGGCAAAGGATTGAAGATGC+AGG + chr3.1:83481316-83481335 MS.gene014927:CDS 45.0%
AGGCTATCCAACTCTACTAG+AGG - chr3.1:83482046-83482065 None:intergenic 45.0%
AGTAGCTCCAACCAATTTGC+CGG + chr3.1:83482280-83482299 MS.gene014927:CDS 45.0%
CAAACGATCGCCAACTAGAA+TGG - chr3.1:83480898-83480917 None:intergenic 45.0%
CAAAGGATTGAAGATGCAGG+AGG + chr3.1:83481319-83481338 MS.gene014927:CDS 45.0%
CAGACTCATGTACAAAGGAC+AGG - chr3.1:83481597-83481616 None:intergenic 45.0%
GTTATATGCAGAGGCGGTAA+TGG + chr3.1:83480948-83480967 MS.gene014927:CDS 45.0%
TCCATTGAAGATCTCTTGCC+AGG - chr3.1:83480104-83480123 None:intergenic 45.0%
TCCTTTGCCTCTCATCAGTT+TGG - chr3.1:83481306-83481325 None:intergenic 45.0%
TGCAAATGTTGGAGACTCCA+GGG + chr3.1:83480923-83480942 MS.gene014927:CDS 45.0%
TGTTGCTGATCCAGAAATCC+AGG + chr3.1:83481505-83481524 MS.gene014927:CDS 45.0%
TTCTTATTCTGGCCAGTGAC+GGG + chr3.1:83481931-83481950 MS.gene014927:CDS 45.0%
TTGCAAATGTTGGAGACTCC+AGG + chr3.1:83480922-83480941 MS.gene014927:CDS 45.0%
TTGGGATGTCGTCTCAAATG+AGG + chr3.1:83481956-83481975 MS.gene014927:CDS 45.0%
! ACCAGAATTGACGGTGTTGA+TGG + chr3.1:83480137-83480156 MS.gene014927:CDS 45.0%
!! AGTTTTGTCCTCAACAAGCC+AGG + chr3.1:83479376-83479395 MS.gene014927:CDS 45.0%
!! ATGCAGGAGGCTTTGTTATG+TGG + chr3.1:83481332-83481351 MS.gene014927:CDS 45.0%
!! CTTTGTTATGTGGGCTGGTA+AGG + chr3.1:83481342-83481361 MS.gene014927:intron 45.0%
!! TGCAGGAGGCTTTGTTATGT+GGG + chr3.1:83481333-83481352 MS.gene014927:CDS 45.0%
ACAGGAACTTGGAGAGTTGG+AGG + chr3.1:83481431-83481450 MS.gene014927:intron 50.0%
ACCGATTGAAGATGCAGAGG+AGG + chr3.1:83482156-83482175 MS.gene014927:CDS 50.0%
ACGATCGCCAACTAGAATGG+CGG - chr3.1:83480895-83480914 None:intergenic 50.0%
AGCCAGACCAAACTGATGAG+AGG + chr3.1:83481296-83481315 MS.gene014927:CDS 50.0%
CAGGTCCGTGCTATAGATGA+TGG + chr3.1:83479395-83479414 MS.gene014927:CDS 50.0%
CATAAAGACCATGCAGCGAC+AGG - chr3.1:83480745-83480764 None:intergenic 50.0%
CATCATCTATAGCACGGACC+TGG - chr3.1:83479397-83479416 None:intergenic 50.0%
CCGGTCCATCATCTATAGCA+CGG - chr3.1:83479403-83479422 None:intergenic 50.0%
GCATCTACCGCCATTCTAGT+TGG + chr3.1:83480885-83480904 MS.gene014927:CDS 50.0%
GCCTCCTCTGCATCTTCAAT+CGG - chr3.1:83482160-83482179 None:intergenic 50.0%
GCCTGGCAAGAGATCTTCAA+TGG + chr3.1:83480100-83480119 MS.gene014927:CDS 50.0%
TGCCTCTCATCAGTTTGGTC+TGG - chr3.1:83481301-83481320 None:intergenic 50.0%
! CTTGCTGTCTCTCGTGCATT+TGG + chr3.1:83481458-83481477 MS.gene014927:CDS 50.0%
! GGCCTTTTCGGAGTCTTTGA+TGG + chr3.1:83480170-83480189 MS.gene014927:CDS 50.0%
!! ATAGATGATGGACCGGTCAG+CGG + chr3.1:83479407-83479426 MS.gene014927:CDS 50.0%
!! CCGTGCTATAGATGATGGAC+CGG + chr3.1:83479400-83479419 MS.gene014927:CDS 50.0%
AAAGACCATGCAGCGACAGG+TGG - chr3.1:83480742-83480761 None:intergenic 55.0%
ACTGTGGCCGGCAAATTGGT+TGG - chr3.1:83482290-83482309 None:intergenic 55.0%
AGGGCCGTTATATGCAGAGG+CGG + chr3.1:83480942-83480961 MS.gene014927:CDS 55.0%
TATGGGTATGCTAGCTCGCC+TGG + chr3.1:83480083-83480102 MS.gene014927:CDS 55.0%
TCCAGGGCCGTTATATGCAG+AGG + chr3.1:83480939-83480958 MS.gene014927:CDS 55.0%
!! GGAGGCTTTGTTATGTGGGC+TGG + chr3.1:83481337-83481356 MS.gene014927:CDS 55.0%
GACATCCCAAAGCCCGTCAC+TGG - chr3.1:83481946-83481965 None:intergenic 60.0%
GCCTCTGCATATAACGGCCC+TGG - chr3.1:83480943-83480962 None:intergenic 60.0%
TCTCTCCACCTGTCGCTGCA+TGG + chr3.1:83480734-83480753 MS.gene014927:intron 60.0%
TTTCGCGGTGGCAGAGAACG+AGG - chr3.1:83480389-83480408 None:intergenic 60.0%
!! AGCACGGACCTGGCTTGTTG+AGG - chr3.1:83479387-83479406 None:intergenic 60.0%
!! TCTGGCCAGTGACGGGCTTT+GGG + chr3.1:83481938-83481957 MS.gene014927:CDS 60.0%
!! TTCTGGCCAGTGACGGGCTT+TGG + chr3.1:83481937-83481956 MS.gene014927:CDS 60.0%
!! GATGATGGACCGGTCAGCGG+TGG + chr3.1:83479410-83479429 MS.gene014927:CDS 65.0%
CTGAGACCGCCACCGCTGAC+CGG - chr3.1:83479422-83479441 None:intergenic 70.0%
GATGGACCGGTCAGCGGTGG+CGG + chr3.1:83479413-83479432 MS.gene014927:CDS 70.0%
! CGGTCAGCGGTGGCGGTCTC+AGG + chr3.1:83479420-83479439 MS.gene014927:CDS 75.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 83479359 83482312 83479359 ID=MS.gene014927
chr3.1 mRNA 83479359 83482312 83479359 ID=MS.gene014927.t1;Parent=MS.gene014927
chr3.1 exon 83479359 83479441 83479359 ID=MS.gene014927.t1.exon1;Parent=MS.gene014927.t1
chr3.1 CDS 83479359 83479441 83479359 ID=cds.MS.gene014927.t1;Parent=MS.gene014927.t1
chr3.1 exon 83480064 83480191 83480064 ID=MS.gene014927.t1.exon2;Parent=MS.gene014927.t1
chr3.1 CDS 83480064 83480191 83480064 ID=cds.MS.gene014927.t1;Parent=MS.gene014927.t1
chr3.1 exon 83480629 83480727 83480629 ID=MS.gene014927.t1.exon3;Parent=MS.gene014927.t1
chr3.1 CDS 83480629 83480727 83480629 ID=cds.MS.gene014927.t1;Parent=MS.gene014927.t1
chr3.1 exon 83480811 83480969 83480811 ID=MS.gene014927.t1.exon4;Parent=MS.gene014927.t1
chr3.1 CDS 83480811 83480969 83480811 ID=cds.MS.gene014927.t1;Parent=MS.gene014927.t1
chr3.1 exon 83481272 83481358 83481272 ID=MS.gene014927.t1.exon5;Parent=MS.gene014927.t1
chr3.1 CDS 83481272 83481358 83481272 ID=cds.MS.gene014927.t1;Parent=MS.gene014927.t1
chr3.1 exon 83481435 83481526 83481435 ID=MS.gene014927.t1.exon6;Parent=MS.gene014927.t1
chr3.1 CDS 83481435 83481526 83481435 ID=cds.MS.gene014927.t1;Parent=MS.gene014927.t1
chr3.1 exon 83481903 83481977 83481903 ID=MS.gene014927.t1.exon7;Parent=MS.gene014927.t1
chr3.1 CDS 83481903 83481977 83481903 ID=cds.MS.gene014927.t1;Parent=MS.gene014927.t1
chr3.1 exon 83482136 83482312 83482136 ID=MS.gene014927.t1.exon8;Parent=MS.gene014927.t1
chr3.1 CDS 83482136 83482312 83482136 ID=cds.MS.gene014927.t1;Parent=MS.gene014927.t1
Gene Sequence

>MS.gene014927

ATGGGATATCTCAATTCAGTTTTGTCCTCAACAAGCCAGGTCCGTGCTATAGATGATGGACCGGTCAGCGGTGGCGGTCTCAGGTATGTTTCTTGCATCTTACGCTTACCAAAATGTGTTGATTTGCATATGCATGATTTGTTCCGTATCATTTGCCAACATGCATTCAAGATATTATCATGAATGAAATGCATTAAGCATTTTCGTATCATTCTGTTTTTTTATTTAATTATTACAAAACTGTCACATTGTGTTAAGTCTCTTTTTAATTTTCAAGTAGTTGTACACAAAAGATGGAATTATTTGAAAATGACTTTTTATCAAACTAGAATTGCTTAAATTTGTTCCCAAAACAACTTTCTCTTGAATATATAATTAATATTTAGTACTAAACTTTATTGATCAATTTTCTCCTTAGATTATAGGTTGTGTCCGAAAAATTGAATACGTTAACGGTTAACTAGTCTGTGTTATTTACTCAAAAAAAAAAAAAAAAAAACTAGTCTGTGTTATAGGTTGAGGATGCGTCGTTTGCTTAACAATGTAATTAAATTTAGTTTTAAATTTTATACATAAGTTGTGGGTTTTATACTTTTAGACATCATTGCTTGGATTCATTCATTGATTTGGGGGAAAAGAGGGAAAAAGAAATTATGAACTGTATGACATTATTGTGACACAATTTGTTGTGATTTGTACATGTAGTCACAATGGAAAGTTTAGCTATGGGTATGCTAGCTCGCCTGGCAAGAGATCTTCAATGGAAGATTTTTATGAGACCAGAATTGACGGTGTTGATGGTGAAATTGTTGGCCTTTTCGGAGTCTTTGATGGTATAGTTACATATTTTTCTCTAATTTTTTTCTCCTGGTCGAATTTTGATTGGAAAATATGCCGAAAATCTTTCACAAGGGAATCATGTCATGGATATTTTATCAGTATTTTCGTATTAATGTTTCTTTCCAAAAATTTTCCATTGCTTACAATATTCGGAAATATATTGCTTCATGTAACGACATATGCAGATCCTCGTTCTCTGCCACCGCGAAAGAATTTTTTTGAAGGTTTTCCAATTTACAAACCTTTTGTTGGCTAAAGACAAGAATAAATGCTTCATCCTCCTCTTTGTTGTTATTTTTGAACCTCCAGTTATTCCATATAGGAATAATTGTTTAGTTAGTGTTTCTTTGTTTTGCCTGAGAAATAAACCGTGTAAGAATTATTTCATATTGGTTATGCCTATATATAAACTTGTCTATAACTCTTTTAGGTCATGGCGGTGTTCGTGCAGCTGAGTATGTTAAGCAAAACTTGTTTAGCAATTTGATCAGTCACCCAAAATTCATTTCTGACACCAAATCAGCAATAGGTATGTTCTCTCCACCTGTCGCTGCATGGTCTTTATGTTTTGTGATTTGCTAAATCCATATAATAACTCTTGCTTTTCCACAGCTGATGCATATAATCATACCGACAATGAATATCTGAAATCAGAAAACAACCATCACAAAGATGCAGGATCTACTGCATCTACCGCCATTCTAGTTGGCGATCGTTTGCTTGTTGCAAATGTTGGAGACTCCAGGGCCGTTATATGCAGAGGCGGTAATGGTAAGAGTACTATCTTCATAGTATTATTCACGTTCTTAGATGCACGCAATTAATTATTGATTGTACTGTTATAGTTGAAAGACGATCTTGATATCATTTAGCATTGATAAATATAAAAGTTATTCAATTGTTTTTAAGCGTATAATGTTAGTGCACGAGTAAAAATGGTAGGGATGCATCGTGTATGCATGTATGTGTATAACAAGTTCTGTTGTAATTACTGCAACAGAATAACTTCAACCTTCTTATGTAGAAGTAGAATGCTTACTTAATTCTTTCCTTCCAATCGTGCTTTCTTGTAGCAATTGCTGTTTCTCGAGATCATAAGCCAGACCAAACTGATGAGAGGCAAAGGATTGAAGATGCAGGAGGCTTTGTTATGTGGGCTGGTAAGGTGACATTGATGTATATTTGTATTTGTTTATTTTTCTTATTTATCACTATTGATAAATATTATTTTTACAGGAACTTGGAGAGTTGGAGGTGTTCTTGCTGTCTCTCGTGCATTTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGGTATATGTCTACTATGGTTAGAGAAATCCATTCTTGACTATTTCATGTGGTTATAGATTCATTTCAACCTGTCCTTTGTACATGAGTCTGTTTGTTTTAAGTTATCTTCGTAGATTTATGGAATATGTGGATAAGGAATATGTATTCCAATGTTTGTCATTTATCCTTATTCTATAATTAACCTTGTACAATAGCATTTTTGAGATTCTTCTAGTTAAAAACTAATTTGGCAATTGCCAATTTGCCATGAACTAGTAACAATTGTAAAAAAAATATTTGTTGTCATGTATGATCTTTATTCTGGGTGATGCGAACATAAATCTTCTTAGTTTTGCTTCTTTTTTTGTATTTATGTTGCATGATTGTGATTTTGCAGGAAGAAAAAGTTGATAGTTCTCTAGAGTTTCTTATTCTGGCCAGTGACGGGCTTTGGGATGTCGTCTCAAATGAGGTTCGCAACGTTATTCATTTTTCACCTTTCACATCCTAACCACCTAAATTCGAAATAATTAAGTTCCTCTAGTAGAGTTGGATAGCCTTGAGTTCTGAAAATGTCATGCTGAGAAGCGTTACTTTTCCAACTTGTTTAACATTTTAAGCATTTTTCAGGAAGCTGTTGGTATGATTAAACCGATTGAAGATGCAGAGGAGGCAGCAAAGAGACTGATGCAAGAAGCATATCAGAGAGGTAGTGCTGACAATATCACTTGTGTCGTTGTTCGTTTCTTGATGAACCAAGGCACTTCTTCTCATAGTAGCTCCAACCAATTTGCCGGCCACAGTTAG
Protein sequence

>MS.gene014927.t1

MGYLNSVLSSTSQVRAIDDGPVSGGGLSHNGKFSYGYASSPGKRSSMEDFYETRIDGVDGEIVGLFGVFDGHGGVRAAEYVKQNLFSNLISHPKFISDTKSAIADAYNHTDNEYLKSENNHHKDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVGMIKPIEDAEEAAKRLMQEAYQRGSADNITCVVVRFLMNQGTSSHSSSNQFAGHS