Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80177.t1 | XP_003603281.1 | 98.9 | 362 | 4 | 0 | 1 | 362 | 1 | 362 | 3.10E-205 | 724.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80177.t1 | Q9SZ53 | 78.9 | 355 | 73 | 1 | 1 | 355 | 1 | 353 | 3.7e-167 | 589.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80177.t1 | G7J9T2 | 98.9 | 362 | 4 | 0 | 1 | 362 | 1 | 362 | 2.2e-205 | 724.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049411 | MS.gene80177 | 0.801797 | 7.60E-49 | -1.69E-46 |
| MS.gene049680 | MS.gene80177 | 0.852285 | 5.10E-61 | -1.69E-46 |
| MS.gene05029 | MS.gene80177 | 0.85119 | 1.04E-60 | -1.69E-46 |
| MS.gene050752 | MS.gene80177 | 0.814515 | 1.48E-51 | -1.69E-46 |
| MS.gene050955 | MS.gene80177 | 0.830229 | 3.30E-55 | -1.69E-46 |
| MS.gene051003 | MS.gene80177 | 0.801243 | 9.87E-49 | -1.69E-46 |
| MS.gene051033 | MS.gene80177 | -0.801568 | 8.47E-49 | -1.69E-46 |
| MS.gene051699 | MS.gene80177 | 0.829514 | 4.93E-55 | -1.69E-46 |
| MS.gene051731 | MS.gene80177 | 0.815293 | 9.96E-52 | -1.69E-46 |
| MS.gene052072 | MS.gene80177 | 0.810796 | 9.65E-51 | -1.69E-46 |
| MS.gene052296 | MS.gene80177 | 0.819725 | 9.99E-53 | -1.69E-46 |
| MS.gene052793 | MS.gene80177 | 0.840594 | 7.92E-58 | -1.69E-46 |
| MS.gene053401 | MS.gene80177 | 0.823508 | 1.33E-53 | -1.69E-46 |
| MS.gene053879 | MS.gene80177 | 0.836152 | 1.11E-56 | -1.69E-46 |
| MS.gene054403 | MS.gene80177 | 0.821185 | 4.62E-53 | -1.69E-46 |
| MS.gene055150 | MS.gene80177 | 0.819118 | 1.37E-52 | -1.69E-46 |
| MS.gene05548 | MS.gene80177 | 0.805627 | 1.22E-49 | -1.69E-46 |
| MS.gene055555 | MS.gene80177 | 0.806495 | 8.00E-50 | -1.69E-46 |
| MS.gene057102 | MS.gene80177 | 0.827325 | 1.67E-54 | -1.69E-46 |
| MS.gene057130 | MS.gene80177 | 0.815871 | 7.40E-52 | -1.69E-46 |
| MS.gene057999 | MS.gene80177 | 0.807395 | 5.16E-50 | -1.69E-46 |
| MS.gene058008 | MS.gene80177 | 0.80812 | 3.62E-50 | -1.69E-46 |
| MS.gene058245 | MS.gene80177 | 0.816684 | 4.87E-52 | -1.69E-46 |
| MS.gene059802 | MS.gene80177 | 0.823524 | 1.32E-53 | -1.69E-46 |
| MS.gene05985 | MS.gene80177 | -0.812715 | 3.69E-51 | -1.69E-46 |
| MS.gene060935 | MS.gene80177 | 0.807216 | 5.63E-50 | -1.69E-46 |
| MS.gene060937 | MS.gene80177 | 0.805241 | 1.47E-49 | -1.69E-46 |
| MS.gene061243 | MS.gene80177 | 0.825354 | 4.91E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene80177 | MS.gene051508 | PPI |
| MS.gene32708 | MS.gene80177 | PPI |
| MS.gene33093 | MS.gene80177 | PPI |
| MS.gene32718 | MS.gene80177 | PPI |
| MS.gene80177 | MS.gene014916 | PPI |
| MS.gene80177 | MS.gene42671 | PPI |
| MS.gene80177 | MS.gene016115 | PPI |
| MS.gene80177 | MS.gene33093 | PPI |
| MS.gene014927 | MS.gene80177 | PPI |
| MS.gene80167 | MS.gene80177 | PPI |
| MS.gene058460 | MS.gene80177 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80177.t1 | MTR_3g105880 | 98.895 | 362 | 4 | 0 | 1 | 362 | 1 | 362 | 0.0 | 748 |
| MS.gene80177.t1 | MTR_3g105880 | 99.315 | 292 | 2 | 0 | 1 | 292 | 1 | 292 | 0.0 | 610 |
| MS.gene80177.t1 | MTR_1g014190 | 78.611 | 360 | 75 | 1 | 1 | 360 | 1 | 358 | 0.0 | 595 |
| MS.gene80177.t1 | MTR_1g014190 | 78.611 | 360 | 75 | 1 | 1 | 360 | 39 | 396 | 0.0 | 594 |
| MS.gene80177.t1 | MTR_4g007440 | 76.338 | 355 | 77 | 2 | 1 | 355 | 1 | 348 | 0.0 | 579 |
| MS.gene80177.t1 | MTR_3g451410 | 80.795 | 151 | 5 | 1 | 40 | 190 | 51 | 177 | 5.48e-81 | 245 |
| MS.gene80177.t1 | MTR_5g024340 | 31.464 | 321 | 152 | 8 | 22 | 331 | 84 | 347 | 1.84e-41 | 149 |
| MS.gene80177.t1 | MTR_3g107880 | 30.723 | 332 | 161 | 8 | 21 | 338 | 22 | 298 | 3.43e-39 | 142 |
| MS.gene80177.t1 | MTR_3g107880 | 31.686 | 344 | 163 | 11 | 10 | 338 | 69 | 355 | 8.78e-39 | 142 |
| MS.gene80177.t1 | MTR_3g107880 | 31.686 | 344 | 163 | 11 | 10 | 338 | 70 | 356 | 9.73e-39 | 142 |
| MS.gene80177.t1 | MTR_5g080680 | 33.935 | 277 | 134 | 8 | 23 | 294 | 101 | 333 | 1.43e-37 | 139 |
| MS.gene80177.t1 | MTR_1g086350 | 30.662 | 287 | 130 | 6 | 22 | 289 | 78 | 314 | 1.54e-34 | 131 |
| MS.gene80177.t1 | MTR_1g086350 | 30.796 | 289 | 131 | 6 | 22 | 291 | 62 | 300 | 1.72e-34 | 130 |
| MS.gene80177.t1 | MTR_2g040500 | 31.395 | 344 | 179 | 11 | 24 | 334 | 221 | 540 | 4.62e-34 | 132 |
| MS.gene80177.t1 | MTR_3g105730 | 29.526 | 359 | 169 | 13 | 5 | 349 | 8 | 296 | 1.81e-33 | 126 |
| MS.gene80177.t1 | MTR_3g091060 | 30.088 | 339 | 165 | 10 | 18 | 350 | 89 | 361 | 1.86e-33 | 127 |
| MS.gene80177.t1 | MTR_1g115570 | 32.278 | 316 | 140 | 11 | 19 | 329 | 91 | 337 | 2.91e-33 | 127 |
| MS.gene80177.t1 | MTR_3g105730 | 29.882 | 338 | 161 | 12 | 18 | 349 | 7 | 274 | 4.75e-33 | 124 |
| MS.gene80177.t1 | MTR_1g014640 | 29.231 | 325 | 160 | 9 | 18 | 337 | 72 | 331 | 5.57e-33 | 125 |
| MS.gene80177.t1 | MTR_1g013400 | 29.231 | 325 | 160 | 9 | 18 | 337 | 72 | 331 | 5.57e-33 | 125 |
| MS.gene80177.t1 | MTR_2g033000 | 30.314 | 287 | 129 | 6 | 21 | 287 | 59 | 294 | 1.53e-32 | 125 |
| MS.gene80177.t1 | MTR_3g068200 | 33.096 | 281 | 137 | 10 | 23 | 296 | 92 | 328 | 6.80e-32 | 124 |
| MS.gene80177.t1 | MTR_4g123080 | 28.485 | 330 | 159 | 8 | 31 | 338 | 82 | 356 | 9.03e-32 | 123 |
| MS.gene80177.t1 | MTR_4g123080 | 27.879 | 330 | 161 | 7 | 31 | 338 | 64 | 338 | 9.16e-32 | 123 |
| MS.gene80177.t1 | MTR_4g125810 | 31.959 | 291 | 132 | 10 | 24 | 293 | 207 | 452 | 1.27e-30 | 122 |
| MS.gene80177.t1 | MTR_1g086350 | 41.667 | 132 | 74 | 1 | 158 | 289 | 84 | 212 | 3.26e-30 | 117 |
| MS.gene80177.t1 | MTR_5g009370 | 33.333 | 288 | 134 | 6 | 14 | 291 | 43 | 282 | 4.56e-30 | 117 |
| MS.gene80177.t1 | MTR_3g464700 | 30.108 | 279 | 128 | 7 | 24 | 295 | 88 | 306 | 6.32e-30 | 117 |
| MS.gene80177.t1 | MTR_5g071550 | 30.797 | 276 | 121 | 8 | 24 | 290 | 124 | 338 | 1.07e-29 | 117 |
| MS.gene80177.t1 | MTR_6g081850 | 27.469 | 324 | 159 | 9 | 30 | 331 | 51 | 320 | 1.67e-29 | 116 |
| MS.gene80177.t1 | MTR_3g491830 | 28.169 | 355 | 188 | 9 | 22 | 351 | 59 | 371 | 3.37e-29 | 116 |
| MS.gene80177.t1 | MTR_3g464650 | 26.126 | 333 | 171 | 9 | 7 | 330 | 49 | 315 | 3.58e-29 | 115 |
| MS.gene80177.t1 | MTR_5g080680 | 34.722 | 216 | 103 | 5 | 23 | 233 | 101 | 283 | 1.57e-28 | 112 |
| MS.gene80177.t1 | MTR_8g102550 | 28.947 | 342 | 163 | 9 | 19 | 330 | 98 | 389 | 5.96e-28 | 113 |
| MS.gene80177.t1 | MTR_4g116420 | 34.104 | 173 | 109 | 1 | 158 | 330 | 184 | 351 | 9.61e-28 | 112 |
| MS.gene80177.t1 | MTR_5g071550 | 30.037 | 273 | 121 | 8 | 24 | 287 | 124 | 335 | 4.99e-27 | 110 |
| MS.gene80177.t1 | MTR_1g015110 | 28.333 | 300 | 141 | 5 | 24 | 293 | 240 | 495 | 6.95e-27 | 112 |
| MS.gene80177.t1 | MTR_3g104710 | 27.667 | 300 | 148 | 7 | 24 | 293 | 231 | 491 | 3.30e-26 | 110 |
| MS.gene80177.t1 | MTR_1g050520 | 29.193 | 322 | 164 | 14 | 22 | 336 | 386 | 650 | 3.32e-26 | 110 |
| MS.gene80177.t1 | MTR_4g094208 | 27.358 | 318 | 154 | 10 | 22 | 330 | 28 | 277 | 4.99e-26 | 105 |
| MS.gene80177.t1 | MTR_5g063940 | 28.213 | 319 | 150 | 13 | 22 | 330 | 33 | 282 | 7.46e-26 | 105 |
| MS.gene80177.t1 | MTR_2g008850 | 27.358 | 318 | 154 | 10 | 22 | 330 | 32 | 281 | 9.53e-26 | 105 |
| MS.gene80177.t1 | MTR_2g008850 | 27.393 | 303 | 144 | 9 | 36 | 330 | 1 | 235 | 3.06e-25 | 102 |
| MS.gene80177.t1 | MTR_5g063940 | 28.053 | 303 | 142 | 11 | 36 | 330 | 1 | 235 | 3.42e-25 | 102 |
| MS.gene80177.t1 | MTR_3g074610 | 30.108 | 279 | 125 | 12 | 22 | 290 | 33 | 251 | 6.44e-25 | 102 |
| MS.gene80177.t1 | MTR_1g028300 | 30.514 | 331 | 159 | 11 | 22 | 336 | 111 | 386 | 9.27e-22 | 95.9 |
| MS.gene80177.t1 | MTR_2g078760 | 31.638 | 177 | 95 | 5 | 160 | 330 | 98 | 254 | 2.32e-21 | 92.4 |
| MS.gene80177.t1 | MTR_2g078760 | 31.638 | 177 | 95 | 5 | 160 | 330 | 177 | 333 | 6.50e-21 | 92.4 |
| MS.gene80177.t1 | MTR_8g463130 | 26.298 | 289 | 139 | 8 | 47 | 329 | 61 | 281 | 7.19e-20 | 89.0 |
| MS.gene80177.t1 | MTR_8g463130 | 26.298 | 289 | 139 | 8 | 47 | 329 | 33 | 253 | 8.09e-20 | 88.2 |
| MS.gene80177.t1 | MTR_3g032700 | 25.723 | 346 | 169 | 12 | 52 | 351 | 68 | 371 | 9.95e-19 | 87.4 |
| MS.gene80177.t1 | MTR_3g032660 | 25.723 | 346 | 169 | 12 | 52 | 351 | 68 | 371 | 1.03e-18 | 87.4 |
| MS.gene80177.t1 | MTR_3g105730 | 29.694 | 229 | 101 | 8 | 5 | 221 | 8 | 188 | 2.58e-18 | 83.2 |
| MS.gene80177.t1 | MTR_1g016620 | 28.929 | 280 | 145 | 10 | 28 | 287 | 43 | 288 | 2.88e-18 | 85.1 |
| MS.gene80177.t1 | MTR_2g078760 | 37.903 | 124 | 60 | 4 | 160 | 277 | 177 | 289 | 8.38e-17 | 80.1 |
| MS.gene80177.t1 | MTR_4g094542 | 23.239 | 284 | 143 | 8 | 52 | 329 | 150 | 364 | 1.82e-16 | 80.1 |
| MS.gene80177.t1 | MTR_1g116260 | 26.119 | 268 | 124 | 8 | 51 | 288 | 79 | 302 | 2.06e-16 | 80.1 |
| MS.gene80177.t1 | MTR_1g106855 | 25.784 | 287 | 135 | 9 | 35 | 289 | 46 | 286 | 2.40e-16 | 79.0 |
| MS.gene80177.t1 | MTR_1g067210 | 25.623 | 281 | 143 | 9 | 33 | 287 | 57 | 297 | 2.81e-16 | 79.7 |
| MS.gene80177.t1 | MTR_7g090530 | 25.212 | 353 | 162 | 13 | 52 | 351 | 69 | 372 | 3.23e-16 | 80.1 |
| MS.gene80177.t1 | MTR_1g106855 | 25.965 | 285 | 133 | 9 | 35 | 287 | 46 | 284 | 3.34e-16 | 79.3 |
| MS.gene80177.t1 | MTR_7g100240 | 25.263 | 285 | 139 | 10 | 33 | 287 | 52 | 292 | 5.23e-16 | 79.0 |
| MS.gene80177.t1 | MTR_4g123080 | 43.182 | 88 | 47 | 1 | 200 | 287 | 110 | 194 | 6.96e-16 | 77.0 |
| MS.gene80177.t1 | MTR_7g080170 | 27.491 | 291 | 168 | 10 | 26 | 287 | 68 | 344 | 1.38e-15 | 78.2 |
| MS.gene80177.t1 | MTR_7g090550 | 24.601 | 313 | 166 | 9 | 35 | 321 | 54 | 322 | 5.44e-15 | 76.3 |
| MS.gene80177.t1 | MTR_2g090190 | 28.873 | 284 | 153 | 11 | 28 | 287 | 65 | 323 | 5.85e-15 | 76.3 |
| MS.gene80177.t1 | MTR_2g033910 | 24.254 | 268 | 130 | 7 | 51 | 288 | 74 | 298 | 1.11e-14 | 75.1 |
| MS.gene80177.t1 | MTR_7g021530 | 27.857 | 280 | 165 | 9 | 30 | 287 | 64 | 328 | 1.60e-14 | 74.7 |
| MS.gene80177.t1 | MTR_7g021530 | 27.857 | 280 | 165 | 9 | 30 | 287 | 105 | 369 | 1.84e-14 | 74.7 |
| MS.gene80177.t1 | MTR_7g021530 | 29.070 | 258 | 148 | 8 | 50 | 287 | 36 | 278 | 3.14e-14 | 73.6 |
| MS.gene80177.t1 | MTR_7g070510 | 24.516 | 310 | 168 | 10 | 13 | 287 | 46 | 324 | 3.54e-14 | 73.9 |
| MS.gene80177.t1 | MTR_3g032590 | 27.311 | 238 | 124 | 8 | 160 | 351 | 143 | 377 | 5.15e-14 | 73.2 |
| MS.gene80177.t1 | MTR_7g080170 | 33.333 | 147 | 72 | 4 | 159 | 287 | 98 | 236 | 6.01e-14 | 72.8 |
| MS.gene80177.t1 | MTR_7g112490 | 27.132 | 258 | 139 | 9 | 52 | 287 | 91 | 321 | 6.55e-14 | 72.8 |
| MS.gene80177.t1 | MTR_7g112490 | 27.132 | 258 | 139 | 9 | 52 | 287 | 109 | 339 | 6.80e-14 | 72.8 |
| MS.gene80177.t1 | MTR_7g081020 | 23.970 | 267 | 129 | 8 | 51 | 287 | 75 | 297 | 8.82e-14 | 71.6 |
| MS.gene80177.t1 | MTR_1g112840 | 26.217 | 267 | 123 | 10 | 51 | 287 | 80 | 302 | 1.02e-13 | 72.0 |
| MS.gene80177.t1 | MTR_7g081020 | 23.574 | 263 | 135 | 8 | 51 | 287 | 75 | 297 | 1.11e-13 | 72.0 |
| MS.gene80177.t1 | MTR_4g037470 | 28.826 | 281 | 158 | 10 | 28 | 287 | 71 | 330 | 1.15e-13 | 72.4 |
| MS.gene80177.t1 | MTR_2g435550 | 26.351 | 296 | 160 | 13 | 54 | 327 | 94 | 353 | 2.51e-13 | 70.9 |
| MS.gene80177.t1 | MTR_2g435550 | 28.125 | 256 | 126 | 13 | 54 | 287 | 94 | 313 | 4.43e-13 | 70.1 |
| MS.gene80177.t1 | MTR_4g013295 | 24.460 | 278 | 162 | 10 | 30 | 287 | 54 | 303 | 4.60e-13 | 70.1 |
| MS.gene80177.t1 | MTR_2g435550 | 28.125 | 256 | 126 | 13 | 54 | 287 | 80 | 299 | 5.25e-13 | 69.7 |
| MS.gene80177.t1 | MTR_1g110210 | 27.885 | 208 | 114 | 6 | 156 | 347 | 128 | 315 | 8.85e-13 | 68.9 |
| MS.gene80177.t1 | MTR_1g083690 | 32.653 | 147 | 73 | 4 | 159 | 287 | 172 | 310 | 9.25e-13 | 68.9 |
| MS.gene80177.t1 | MTR_1g019760 | 34.437 | 151 | 70 | 6 | 153 | 285 | 120 | 259 | 1.39e-12 | 68.9 |
| MS.gene80177.t1 | MTR_8g074930 | 24.911 | 281 | 145 | 9 | 33 | 287 | 60 | 300 | 1.81e-12 | 68.6 |
| MS.gene80177.t1 | MTR_1g019760 | 34.437 | 151 | 70 | 6 | 153 | 285 | 120 | 259 | 1.94e-12 | 68.6 |
| MS.gene80177.t1 | MTR_8g017240 | 30.612 | 147 | 76 | 3 | 159 | 287 | 163 | 301 | 2.43e-12 | 67.8 |
| MS.gene80177.t1 | MTR_3g101540 | 31.944 | 144 | 71 | 5 | 158 | 285 | 128 | 260 | 2.74e-12 | 67.8 |
| MS.gene80177.t1 | MTR_3g101540 | 31.944 | 144 | 71 | 5 | 158 | 285 | 128 | 260 | 2.74e-12 | 67.8 |
| MS.gene80177.t1 | MTR_4g037470 | 29.389 | 262 | 144 | 10 | 46 | 287 | 99 | 339 | 5.03e-12 | 67.4 |
| MS.gene80177.t1 | MTR_8g074930 | 29.221 | 154 | 83 | 4 | 160 | 287 | 35 | 188 | 1.57e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80177.t1 | AT4G31860 | 78.873 | 355 | 73 | 1 | 1 | 355 | 1 | 353 | 0.0 | 604 |
| MS.gene80177.t1 | AT2G25070 | 76.246 | 341 | 81 | 0 | 1 | 341 | 1 | 341 | 0.0 | 575 |
| MS.gene80177.t1 | AT2G25070 | 76.246 | 341 | 81 | 0 | 1 | 341 | 1 | 341 | 0.0 | 575 |
| MS.gene80177.t1 | AT4G31860 | 83.162 | 291 | 49 | 0 | 1 | 291 | 1 | 291 | 0.0 | 530 |
| MS.gene80177.t1 | AT4G31860 | 84.000 | 275 | 44 | 0 | 1 | 275 | 1 | 275 | 0.0 | 503 |
| MS.gene80177.t1 | AT2G25620 | 30.909 | 330 | 163 | 7 | 23 | 338 | 89 | 367 | 1.04e-37 | 139 |
| MS.gene80177.t1 | AT2G25620 | 30.909 | 330 | 163 | 7 | 23 | 338 | 89 | 367 | 1.04e-37 | 139 |
| MS.gene80177.t1 | AT5G10740 | 31.045 | 335 | 157 | 10 | 4 | 329 | 10 | 279 | 1.32e-37 | 138 |
| MS.gene80177.t1 | AT5G10740 | 31.045 | 335 | 157 | 10 | 4 | 329 | 10 | 279 | 1.32e-37 | 138 |
| MS.gene80177.t1 | AT2G33700 | 29.022 | 317 | 159 | 6 | 23 | 329 | 84 | 344 | 1.42e-36 | 136 |
| MS.gene80177.t1 | AT5G24940 | 31.132 | 318 | 147 | 11 | 18 | 329 | 28 | 279 | 1.82e-36 | 137 |
| MS.gene80177.t1 | AT3G51470 | 28.213 | 319 | 164 | 7 | 22 | 333 | 27 | 287 | 3.28e-36 | 134 |
| MS.gene80177.t1 | AT3G51470 | 28.213 | 319 | 164 | 7 | 22 | 333 | 71 | 331 | 3.74e-36 | 135 |
| MS.gene80177.t1 | AT4G31750 | 28.729 | 362 | 177 | 11 | 7 | 355 | 9 | 302 | 3.44e-34 | 128 |
| MS.gene80177.t1 | AT4G31750 | 28.729 | 362 | 177 | 11 | 7 | 355 | 9 | 302 | 3.44e-34 | 128 |
| MS.gene80177.t1 | AT4G31750 | 29.167 | 336 | 160 | 10 | 7 | 329 | 9 | 279 | 1.48e-33 | 126 |
| MS.gene80177.t1 | AT1G43900 | 30.723 | 332 | 150 | 12 | 4 | 330 | 113 | 369 | 1.53e-33 | 128 |
| MS.gene80177.t1 | AT1G07430 | 33.916 | 286 | 131 | 11 | 21 | 293 | 118 | 358 | 1.59e-33 | 129 |
| MS.gene80177.t1 | AT1G48040 | 30.408 | 319 | 167 | 10 | 33 | 342 | 88 | 360 | 2.92e-32 | 125 |
| MS.gene80177.t1 | AT5G53140 | 29.714 | 350 | 171 | 14 | 14 | 358 | 95 | 374 | 1.06e-31 | 124 |
| MS.gene80177.t1 | AT5G53140 | 29.714 | 350 | 171 | 14 | 14 | 358 | 95 | 374 | 1.06e-31 | 124 |
| MS.gene80177.t1 | AT2G29380 | 32.787 | 305 | 145 | 13 | 4 | 293 | 55 | 314 | 1.96e-31 | 122 |
| MS.gene80177.t1 | AT4G27800 | 28.818 | 347 | 180 | 9 | 22 | 343 | 58 | 362 | 6.48e-31 | 121 |
| MS.gene80177.t1 | AT1G67820 | 33.212 | 274 | 120 | 8 | 24 | 291 | 85 | 301 | 9.47e-31 | 121 |
| MS.gene80177.t1 | AT1G67820 | 33.212 | 274 | 120 | 8 | 24 | 291 | 121 | 337 | 1.32e-30 | 121 |
| MS.gene80177.t1 | AT3G62260 | 29.483 | 329 | 155 | 9 | 22 | 329 | 77 | 349 | 3.43e-30 | 119 |
| MS.gene80177.t1 | AT3G62260 | 29.483 | 329 | 155 | 9 | 22 | 329 | 76 | 348 | 3.93e-30 | 119 |
| MS.gene80177.t1 | AT3G62260 | 29.231 | 325 | 153 | 9 | 36 | 339 | 1 | 269 | 7.85e-30 | 116 |
| MS.gene80177.t1 | AT4G26080 | 29.861 | 288 | 136 | 6 | 24 | 293 | 129 | 368 | 1.12e-29 | 118 |
| MS.gene80177.t1 | AT1G07160 | 27.729 | 339 | 159 | 11 | 7 | 329 | 108 | 376 | 2.84e-29 | 116 |
| MS.gene80177.t1 | AT5G57050 | 28.354 | 328 | 163 | 8 | 24 | 329 | 73 | 350 | 2.97e-29 | 116 |
| MS.gene80177.t1 | AT5G59220 | 31.707 | 287 | 139 | 10 | 23 | 298 | 111 | 351 | 3.87e-29 | 117 |
| MS.gene80177.t1 | AT5G57050 | 28.354 | 328 | 163 | 8 | 24 | 329 | 113 | 390 | 4.95e-29 | 116 |
| MS.gene80177.t1 | AT3G11410 | 32.472 | 271 | 141 | 9 | 19 | 281 | 100 | 336 | 4.99e-29 | 116 |
| MS.gene80177.t1 | AT2G30020 | 29.841 | 315 | 153 | 11 | 24 | 329 | 140 | 395 | 1.12e-28 | 115 |
| MS.gene80177.t1 | AT4G27800 | 30.065 | 306 | 152 | 8 | 22 | 302 | 58 | 326 | 1.65e-28 | 114 |
| MS.gene80177.t1 | AT5G51760 | 29.060 | 351 | 166 | 11 | 24 | 334 | 79 | 386 | 1.68e-28 | 114 |
| MS.gene80177.t1 | AT5G51760 | 29.060 | 351 | 166 | 11 | 24 | 334 | 109 | 416 | 1.90e-28 | 115 |
| MS.gene80177.t1 | AT4G27800 | 29.836 | 305 | 152 | 8 | 22 | 301 | 58 | 325 | 4.77e-28 | 112 |
| MS.gene80177.t1 | AT1G17550 | 31.469 | 286 | 145 | 9 | 24 | 286 | 189 | 446 | 6.83e-28 | 114 |
| MS.gene80177.t1 | AT1G17550 | 31.469 | 286 | 145 | 9 | 24 | 286 | 189 | 446 | 6.83e-28 | 114 |
| MS.gene80177.t1 | AT1G18030 | 29.938 | 324 | 151 | 12 | 30 | 331 | 81 | 350 | 1.32e-27 | 111 |
| MS.gene80177.t1 | AT3G17250 | 27.217 | 327 | 170 | 9 | 32 | 342 | 127 | 401 | 1.64e-27 | 112 |
| MS.gene80177.t1 | AT1G72770 | 31.741 | 293 | 134 | 10 | 24 | 286 | 190 | 446 | 2.83e-27 | 112 |
| MS.gene80177.t1 | AT1G72770 | 31.741 | 293 | 134 | 10 | 24 | 286 | 190 | 446 | 2.83e-27 | 112 |
| MS.gene80177.t1 | AT1G72770 | 31.741 | 293 | 134 | 10 | 24 | 286 | 190 | 446 | 2.83e-27 | 112 |
| MS.gene80177.t1 | AT1G78200 | 28.616 | 318 | 153 | 13 | 22 | 330 | 31 | 283 | 2.69e-26 | 106 |
| MS.gene80177.t1 | AT1G78200 | 28.616 | 318 | 153 | 13 | 22 | 330 | 31 | 283 | 2.69e-26 | 106 |
| MS.gene80177.t1 | AT1G78200 | 28.616 | 318 | 153 | 13 | 22 | 330 | 31 | 283 | 2.69e-26 | 106 |
| MS.gene80177.t1 | AT2G40860 | 28.435 | 313 | 159 | 14 | 31 | 336 | 302 | 556 | 1.16e-25 | 108 |
| MS.gene80177.t1 | AT2G40180 | 28.571 | 322 | 151 | 13 | 24 | 330 | 129 | 386 | 1.17e-25 | 107 |
| MS.gene80177.t1 | AT2G40860 | 28.435 | 313 | 159 | 14 | 31 | 336 | 400 | 654 | 1.95e-25 | 108 |
| MS.gene80177.t1 | AT1G78200 | 28.383 | 303 | 144 | 12 | 36 | 330 | 1 | 238 | 4.14e-24 | 99.8 |
| MS.gene80177.t1 | AT1G78200 | 28.383 | 303 | 144 | 12 | 36 | 330 | 1 | 238 | 4.14e-24 | 99.8 |
| MS.gene80177.t1 | AT2G40860 | 28.947 | 266 | 133 | 10 | 31 | 289 | 400 | 616 | 6.92e-23 | 100 |
| MS.gene80177.t1 | AT1G18030 | 30.741 | 270 | 115 | 11 | 30 | 277 | 81 | 300 | 2.08e-22 | 96.3 |
| MS.gene80177.t1 | AT3G15260 | 35.955 | 178 | 86 | 7 | 160 | 330 | 133 | 289 | 1.84e-21 | 93.6 |
| MS.gene80177.t1 | AT3G15260 | 35.955 | 178 | 86 | 7 | 160 | 330 | 133 | 289 | 1.84e-21 | 93.6 |
| MS.gene80177.t1 | AT1G34750 | 27.551 | 294 | 142 | 12 | 6 | 290 | 20 | 251 | 4.42e-21 | 92.4 |
| MS.gene80177.t1 | AT1G34750 | 27.551 | 294 | 142 | 12 | 6 | 290 | 20 | 251 | 4.42e-21 | 92.4 |
| MS.gene80177.t1 | AT1G34750 | 27.551 | 294 | 142 | 12 | 6 | 290 | 20 | 251 | 4.42e-21 | 92.4 |
| MS.gene80177.t1 | AT4G28400 | 27.113 | 284 | 133 | 8 | 52 | 329 | 45 | 260 | 6.37e-21 | 91.3 |
| MS.gene80177.t1 | AT4G28400 | 34.091 | 176 | 90 | 5 | 160 | 329 | 127 | 282 | 1.27e-20 | 90.9 |
| MS.gene80177.t1 | AT5G59220 | 33.184 | 223 | 103 | 7 | 23 | 234 | 111 | 298 | 2.46e-20 | 90.5 |
| MS.gene80177.t1 | AT2G20630 | 25.614 | 285 | 138 | 8 | 52 | 330 | 63 | 279 | 4.09e-20 | 89.4 |
| MS.gene80177.t1 | AT2G20630 | 27.755 | 245 | 112 | 7 | 52 | 290 | 63 | 248 | 4.00e-19 | 87.0 |
| MS.gene80177.t1 | AT1G72770 | 32.510 | 243 | 107 | 8 | 24 | 236 | 190 | 405 | 4.40e-19 | 88.2 |
| MS.gene80177.t1 | AT1G72770 | 32.510 | 243 | 107 | 8 | 24 | 236 | 190 | 405 | 4.40e-19 | 88.2 |
| MS.gene80177.t1 | AT1G22280 | 24.528 | 318 | 163 | 12 | 22 | 330 | 32 | 281 | 2.16e-18 | 84.7 |
| MS.gene80177.t1 | AT1G34750 | 28.315 | 279 | 129 | 12 | 6 | 275 | 20 | 236 | 3.52e-18 | 83.2 |
| MS.gene80177.t1 | AT5G36250 | 28.866 | 291 | 162 | 9 | 26 | 287 | 70 | 344 | 1.20e-17 | 84.3 |
| MS.gene80177.t1 | AT1G22280 | 24.149 | 323 | 164 | 12 | 22 | 330 | 32 | 287 | 2.16e-17 | 82.0 |
| MS.gene80177.t1 | AT2G34740 | 29.348 | 184 | 103 | 7 | 153 | 329 | 171 | 334 | 2.63e-17 | 82.4 |
| MS.gene80177.t1 | AT5G57050 | 30.380 | 237 | 96 | 8 | 24 | 233 | 113 | 307 | 3.11e-17 | 81.6 |
| MS.gene80177.t1 | AT4G28400 | 38.346 | 133 | 65 | 4 | 160 | 286 | 127 | 248 | 4.88e-17 | 80.1 |
| MS.gene80177.t1 | AT1G16220 | 27.113 | 284 | 171 | 8 | 26 | 287 | 67 | 336 | 1.19e-16 | 81.6 |
| MS.gene80177.t1 | AT3G12620 | 25.000 | 312 | 151 | 9 | 13 | 287 | 39 | 304 | 2.41e-16 | 80.1 |
| MS.gene80177.t1 | AT3G12620 | 25.000 | 312 | 151 | 9 | 13 | 287 | 39 | 304 | 2.41e-16 | 80.1 |
| MS.gene80177.t1 | AT3G55050 | 25.000 | 268 | 127 | 7 | 51 | 288 | 83 | 306 | 2.49e-16 | 80.1 |
| MS.gene80177.t1 | AT3G55050 | 25.000 | 268 | 127 | 7 | 51 | 288 | 83 | 306 | 2.49e-16 | 80.1 |
| MS.gene80177.t1 | AT5G02760 | 33.758 | 157 | 72 | 5 | 160 | 288 | 140 | 292 | 2.92e-16 | 79.7 |
| MS.gene80177.t1 | AT1G03590 | 28.772 | 285 | 151 | 11 | 28 | 287 | 65 | 322 | 1.04e-15 | 78.6 |
| MS.gene80177.t1 | AT4G33920 | 25.926 | 297 | 140 | 11 | 24 | 287 | 36 | 285 | 1.13e-15 | 78.2 |
| MS.gene80177.t1 | AT2G34740 | 33.333 | 141 | 71 | 6 | 142 | 275 | 179 | 303 | 1.28e-15 | 77.4 |
| MS.gene80177.t1 | AT2G34740 | 33.333 | 141 | 71 | 6 | 142 | 275 | 161 | 285 | 1.40e-15 | 77.0 |
| MS.gene80177.t1 | AT1G79630 | 26.923 | 312 | 156 | 12 | 26 | 287 | 70 | 359 | 1.41e-15 | 78.2 |
| MS.gene80177.t1 | AT1G79630 | 26.923 | 312 | 156 | 12 | 26 | 287 | 66 | 355 | 1.65e-15 | 78.2 |
| MS.gene80177.t1 | AT4G03415 | 28.114 | 281 | 161 | 9 | 28 | 287 | 72 | 332 | 1.94e-15 | 77.8 |
| MS.gene80177.t1 | AT4G03415 | 28.114 | 281 | 161 | 9 | 28 | 287 | 72 | 332 | 1.94e-15 | 77.8 |
| MS.gene80177.t1 | AT4G03415 | 28.114 | 281 | 161 | 9 | 28 | 287 | 72 | 332 | 1.94e-15 | 77.8 |
| MS.gene80177.t1 | AT5G26010 | 26.756 | 299 | 152 | 11 | 11 | 287 | 30 | 283 | 2.47e-15 | 76.6 |
| MS.gene80177.t1 | AT3G17090 | 25.843 | 267 | 126 | 9 | 51 | 288 | 83 | 306 | 3.00e-15 | 76.3 |
| MS.gene80177.t1 | AT4G32950 | 36.054 | 147 | 68 | 5 | 159 | 287 | 138 | 276 | 3.35e-15 | 76.3 |
| MS.gene80177.t1 | AT3G17090 | 25.843 | 267 | 126 | 9 | 51 | 288 | 83 | 306 | 4.49e-15 | 76.3 |
| MS.gene80177.t1 | AT1G79630 | 34.694 | 147 | 70 | 4 | 159 | 287 | 111 | 249 | 7.17e-15 | 75.9 |
| MS.gene80177.t1 | AT1G79630 | 34.694 | 147 | 70 | 4 | 159 | 287 | 111 | 249 | 7.17e-15 | 75.9 |
| MS.gene80177.t1 | AT1G79630 | 34.694 | 147 | 70 | 4 | 159 | 287 | 111 | 249 | 7.17e-15 | 75.9 |
| MS.gene80177.t1 | AT1G79630 | 34.694 | 147 | 70 | 4 | 159 | 287 | 111 | 249 | 7.17e-15 | 75.9 |
| MS.gene80177.t1 | AT1G79630 | 34.694 | 147 | 70 | 4 | 159 | 287 | 151 | 289 | 8.89e-15 | 75.5 |
| MS.gene80177.t1 | AT1G79630 | 34.694 | 147 | 70 | 4 | 159 | 287 | 151 | 289 | 8.89e-15 | 75.5 |
| MS.gene80177.t1 | AT3G16800 | 34.228 | 149 | 71 | 5 | 159 | 288 | 74 | 214 | 1.02e-14 | 73.6 |
| MS.gene80177.t1 | AT3G16800 | 34.228 | 149 | 71 | 5 | 159 | 288 | 74 | 214 | 1.02e-14 | 73.6 |
| MS.gene80177.t1 | AT4G38520 | 26.136 | 264 | 127 | 7 | 51 | 287 | 80 | 302 | 1.22e-14 | 75.1 |
| MS.gene80177.t1 | AT4G38520 | 26.136 | 264 | 127 | 7 | 51 | 287 | 80 | 302 | 1.22e-14 | 75.1 |
| MS.gene80177.t1 | AT5G36250 | 27.541 | 305 | 162 | 10 | 26 | 287 | 70 | 358 | 1.71e-14 | 74.7 |
| MS.gene80177.t1 | AT3G16800 | 34.228 | 149 | 71 | 5 | 159 | 288 | 169 | 309 | 1.77e-14 | 74.3 |
| MS.gene80177.t1 | AT3G16800 | 34.228 | 149 | 71 | 5 | 159 | 288 | 169 | 309 | 1.77e-14 | 74.3 |
| MS.gene80177.t1 | AT3G16800 | 34.228 | 149 | 71 | 5 | 159 | 288 | 169 | 309 | 1.77e-14 | 74.3 |
| MS.gene80177.t1 | AT5G27930 | 28.125 | 256 | 131 | 9 | 52 | 287 | 92 | 314 | 1.78e-14 | 74.3 |
| MS.gene80177.t1 | AT5G27930 | 28.125 | 256 | 131 | 9 | 52 | 287 | 92 | 314 | 1.78e-14 | 74.3 |
| MS.gene80177.t1 | AT3G02750 | 34.694 | 147 | 70 | 3 | 159 | 287 | 215 | 353 | 1.83e-14 | 74.7 |
| MS.gene80177.t1 | AT3G02750 | 34.694 | 147 | 70 | 3 | 159 | 287 | 215 | 353 | 1.83e-14 | 74.7 |
| MS.gene80177.t1 | AT3G63340 | 27.234 | 235 | 114 | 6 | 159 | 343 | 232 | 459 | 2.50e-14 | 75.1 |
| MS.gene80177.t1 | AT3G63340 | 27.234 | 235 | 114 | 6 | 159 | 343 | 232 | 459 | 2.57e-14 | 75.1 |
| MS.gene80177.t1 | AT3G63340 | 27.234 | 235 | 114 | 6 | 159 | 343 | 232 | 459 | 2.62e-14 | 75.1 |
| MS.gene80177.t1 | AT3G63340 | 27.234 | 235 | 114 | 6 | 159 | 343 | 232 | 459 | 2.62e-14 | 75.1 |
| MS.gene80177.t1 | AT3G63340 | 27.234 | 235 | 114 | 6 | 159 | 343 | 232 | 459 | 2.68e-14 | 74.7 |
| MS.gene80177.t1 | AT3G63340 | 27.234 | 235 | 114 | 6 | 159 | 343 | 232 | 459 | 2.68e-14 | 74.7 |
| MS.gene80177.t1 | AT3G63340 | 27.234 | 235 | 114 | 6 | 159 | 343 | 232 | 459 | 2.68e-14 | 74.7 |
| MS.gene80177.t1 | AT3G63340 | 27.234 | 235 | 114 | 6 | 159 | 343 | 232 | 459 | 2.68e-14 | 74.7 |
| MS.gene80177.t1 | AT3G63340 | 27.234 | 235 | 114 | 6 | 159 | 343 | 232 | 459 | 3.39e-14 | 74.3 |
| MS.gene80177.t1 | AT3G63340 | 27.234 | 235 | 114 | 6 | 159 | 343 | 232 | 459 | 5.70e-14 | 73.6 |
| MS.gene80177.t1 | AT3G51370 | 23.596 | 267 | 130 | 8 | 51 | 287 | 78 | 300 | 1.15e-13 | 72.0 |
| MS.gene80177.t1 | AT3G51370 | 23.596 | 267 | 130 | 8 | 51 | 287 | 78 | 300 | 1.15e-13 | 72.0 |
| MS.gene80177.t1 | AT5G66080 | 23.596 | 267 | 130 | 9 | 51 | 287 | 81 | 303 | 1.34e-13 | 71.6 |
| MS.gene80177.t1 | AT5G06750 | 24.542 | 273 | 125 | 8 | 52 | 289 | 82 | 308 | 9.16e-13 | 69.3 |
| MS.gene80177.t1 | AT5G06750 | 24.542 | 273 | 125 | 8 | 52 | 289 | 82 | 308 | 9.16e-13 | 69.3 |
| MS.gene80177.t1 | AT3G63340 | 31.250 | 160 | 96 | 4 | 191 | 343 | 340 | 492 | 9.93e-13 | 70.1 |
| MS.gene80177.t1 | AT5G01700 | 25.436 | 287 | 150 | 11 | 26 | 287 | 1 | 248 | 3.92e-12 | 67.0 |
| MS.gene80177.t1 | AT3G05640 | 30.323 | 155 | 82 | 5 | 151 | 287 | 163 | 309 | 6.99e-12 | 66.6 |
| MS.gene80177.t1 | AT3G05640 | 30.323 | 155 | 82 | 5 | 151 | 287 | 163 | 309 | 6.99e-12 | 66.6 |
| MS.gene80177.t1 | AT3G05640 | 30.323 | 155 | 82 | 5 | 151 | 287 | 163 | 309 | 6.99e-12 | 66.6 |
| MS.gene80177.t1 | AT5G01700 | 25.436 | 287 | 150 | 11 | 26 | 287 | 50 | 297 | 7.20e-12 | 66.6 |
| MS.gene80177.t1 | AT3G51370 | 27.848 | 158 | 80 | 4 | 160 | 287 | 62 | 215 | 1.03e-11 | 65.5 |
| MS.gene80177.t1 | AT4G08260 | 29.944 | 177 | 99 | 7 | 156 | 329 | 57 | 211 | 1.57e-11 | 63.5 |
| MS.gene80177.t1 | AT4G33920 | 30.864 | 162 | 77 | 6 | 158 | 287 | 14 | 172 | 1.72e-11 | 64.3 |
| MS.gene80177.t1 | AT4G33920 | 30.864 | 162 | 77 | 6 | 158 | 287 | 44 | 202 | 2.33e-11 | 64.3 |
| MS.gene80177.t1 | AT5G66080 | 26.582 | 158 | 82 | 4 | 160 | 287 | 46 | 199 | 2.59e-11 | 63.9 |
| MS.gene80177.t1 | AT5G06750 | 28.834 | 163 | 79 | 5 | 160 | 289 | 68 | 226 | 7.72e-11 | 62.8 |
Find 69 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTGATGAAGATGAGTTTA+TGG | 0.265435 | 3.4:+92423351 | MS.gene80177:CDS |
| AAACTTACAGTGTTTATATC+TGG | 0.272615 | 3.4:-92423156 | None:intergenic |
| ACTTCGCTTCTTTCCACTTT+CGG | 0.325357 | 3.4:-92424428 | None:intergenic |
| TTAAACCTTGCAAGAGCTAT+TGG | 0.340623 | 3.4:+92422696 | MS.gene80177:CDS |
| GCATACTTAGCTGGAGATAT+AGG | 0.353334 | 3.4:+92421346 | MS.gene80177:CDS |
| GAAAATGACCGTCTTAGATA+TGG | 0.379194 | 3.4:+92420281 | MS.gene80177:CDS |
| AAGTTCAGTGGGATGATAGA+AGG | 0.381756 | 3.4:+92421921 | MS.gene80177:CDS |
| TCCTTCTCAATCTCAAGATC+AGG | 0.384503 | 3.4:-92422621 | None:intergenic |
| CCTTCGCCACCAGCAGTTGA+TGG | 0.406279 | 3.4:-92424296 | None:intergenic |
| GGATGATAGAAGGGTTGATT+TGG | 0.408042 | 3.4:+92421931 | MS.gene80177:CDS |
| GTATTAACCGAGTTGATGAT+TGG | 0.410347 | 3.4:+92421973 | MS.gene80177:CDS |
| ATGGAGGGAGCTATCAATCT+TGG | 0.415716 | 3.4:+92421884 | MS.gene80177:CDS |
| GATGATGATTGCTCTTCTGC+AGG | 0.424321 | 3.4:-92424377 | None:intergenic |
| GCAAGGCTGGCGTGCATCAA+TGG | 0.439275 | 3.4:+92420316 | MS.gene80177:CDS |
| TTGCTCTTCTGCAGGTGCAC+TGG | 0.443233 | 3.4:-92424369 | None:intergenic |
| CAATCTCAAGATCAGGTTTG+TGG | 0.448649 | 3.4:-92422614 | None:intergenic |
| AAGAGTACTTGACCGGTGTT+TGG | 0.457534 | 3.4:+92424271 | MS.gene80177:CDS |
| TTTGAACTGCACCAAGATCA+TGG | 0.459378 | 3.4:-92424333 | None:intergenic |
| CAGCATTTGCAACAACAACT+TGG | 0.462852 | 3.4:-92422279 | None:intergenic |
| AGTTCATGAACTACTGTGTT+TGG | 0.463645 | 3.4:+92423853 | MS.gene80177:CDS |
| AGTTGATGATTGGGCCTTTG+AGG | 0.465711 | 3.4:+92421983 | MS.gene80177:CDS |
| GCAGGTGCACTGGACTGAGC+AGG | 0.465899 | 3.4:-92424359 | None:intergenic |
| GCATGCTGCATATACTGATC+TGG | 0.467368 | 3.4:+92420859 | MS.gene80177:intron |
| TTAATACCATTGCTGCTTCG+TGG | 0.468931 | 3.4:-92421957 | None:intergenic |
| GATAAGATAAACAAGTTCAG+TGG | 0.469232 | 3.4:+92421909 | MS.gene80177:CDS |
| TACAGTGTTTATATCTGGAT+TGG | 0.469339 | 3.4:-92423151 | None:intergenic |
| CTGCTTGTCAAGTCAACAAT+TGG | 0.471070 | 3.4:+92423823 | MS.gene80177:CDS |
| ATCACATGTTGAACCGAAAG+TGG | 0.477597 | 3.4:+92424415 | MS.gene80177:CDS |
| CAAGTTGTTGTTGCAAATGC+TGG | 0.490892 | 3.4:+92422280 | MS.gene80177:CDS |
| TGCTAGCTTGTGATGGCATA+TGG | 0.491268 | 3.4:+92423374 | MS.gene80177:CDS |
| TGTAATATCTCGGAAGGGCC+AGG | 0.495009 | 3.4:+92422315 | MS.gene80177:CDS |
| CCATCAACTGCTGGTGGCGA+AGG | 0.496781 | 3.4:+92424296 | MS.gene80177:CDS |
| TGGAGGGAGCTATCAATCTT+GGG | 0.503649 | 3.4:+92421885 | MS.gene80177:CDS |
| GGTTCAACATGTGATTCAGC+TGG | 0.506557 | 3.4:-92424407 | None:intergenic |
| TGATAACATGACCATGATCT+TGG | 0.508668 | 3.4:+92424322 | MS.gene80177:CDS |
| AAGGAAAGAATCTTAAAAGC+TGG | 0.515169 | 3.4:+92422639 | MS.gene80177:CDS |
| CAGGCTGTGCTTCCTGAAGT+TGG | 0.537802 | 3.4:-92422235 | None:intergenic |
| TTTGGCGTTTATGATGGTCA+TGG | 0.539479 | 3.4:+92420899 | MS.gene80177:CDS |
| TATTAACCGAGTTGATGATT+GGG | 0.540196 | 3.4:+92421974 | MS.gene80177:CDS |
| GTTTCTAATAACTGCAACAC+AGG | 0.558516 | 3.4:-92422254 | None:intergenic |
| ATAAGATAAACAAGTTCAGT+GGG | 0.564058 | 3.4:+92421910 | MS.gene80177:CDS |
| AGTTACCAATAGCTCTTGCA+AGG | 0.565687 | 3.4:-92422701 | None:intergenic |
| TGATGCGTGGTCAAAGAGGA+TGG | 0.567410 | 3.4:+92421865 | MS.gene80177:CDS |
| TTTATGGTGCTAGCTTGTGA+TGG | 0.580225 | 3.4:+92423367 | MS.gene80177:CDS |
| ATTCGCGTTGTGTAATATCT+CGG | 0.580696 | 3.4:+92422305 | MS.gene80177:CDS |
| TCAATTCATTGTAGGTGACA+TGG | 0.582161 | 3.4:+92423080 | MS.gene80177:intron |
| GAAAGAATCTTAAAAGCTGG+TGG | 0.582557 | 3.4:+92422642 | MS.gene80177:CDS |
| GCGTTGTGTAATATCTCGGA+AGG | 0.584039 | 3.4:+92422309 | MS.gene80177:CDS |
| GTTTATCATCAATGCAAGGC+TGG | 0.589422 | 3.4:+92420303 | MS.gene80177:CDS |
| CAGTTGATGGTGCCAAACAC+CGG | 0.590786 | 3.4:-92424283 | None:intergenic |
| TGGTCTCCACGAAGCAGCAA+TGG | 0.594647 | 3.4:+92421951 | MS.gene80177:CDS |
| AGTTCAGTGGGATGATAGAA+GGG | 0.599134 | 3.4:+92421922 | MS.gene80177:CDS |
| GCGTGGTCAAAGAGGATGGA+GGG | 0.599400 | 3.4:+92421869 | MS.gene80177:CDS |
| CAAAGGCCCAATCATCAACT+CGG | 0.600050 | 3.4:-92421980 | None:intergenic |
| ATGATAAACCATATCTAAGA+CGG | 0.602011 | 3.4:-92420289 | None:intergenic |
| ACCTGATCTTGAGATTGAGA+AGG | 0.604677 | 3.4:+92422620 | MS.gene80177:CDS |
| TGTTTGGCACCATCAACTGC+TGG | 0.605486 | 3.4:+92424287 | MS.gene80177:CDS |
| ATTCATGCAGGACGAGTGAA+CGG | 0.606384 | 3.4:+92422669 | MS.gene80177:CDS |
| TGATGATTGGGCCTTTGAGG+AGG | 0.617991 | 3.4:+92421986 | MS.gene80177:CDS |
| TGTCAGACCTACCTCCTCAA+AGG | 0.629378 | 3.4:-92421997 | None:intergenic |
| GGTCCAGCAAAATCAGAATG+AGG | 0.630449 | 3.4:-92422214 | None:intergenic |
| TATGGTTTATCATCAATGCA+AGG | 0.642455 | 3.4:+92420299 | MS.gene80177:CDS |
| GGCGTTTATGATGGTCATGG+AGG | 0.652696 | 3.4:+92420902 | MS.gene80177:CDS |
| GAGATGATGCGTGGTCAAAG+AGG | 0.678107 | 3.4:+92421861 | MS.gene80177:CDS |
| TGTGTGAAAGAGTACTTGAC+CGG | 0.686232 | 3.4:+92424264 | MS.gene80177:CDS |
| CGTTGTGTAATATCTCGGAA+GGG | 0.694273 | 3.4:+92422310 | MS.gene80177:CDS |
| TTGGCACCATCAACTGCTGG+TGG | 0.700424 | 3.4:+92424290 | MS.gene80177:CDS |
| TGCGTGGTCAAAGAGGATGG+AGG | 0.715747 | 3.4:+92421868 | MS.gene80177:CDS |
| AGAATGGATGAGATGATGCG+TGG | 0.759110 | 3.4:+92421852 | MS.gene80177:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCAATTATTATTTTAAGAA+AGG | - | chr3.4:92423782-92423801 | None:intergenic | 10.0% |
| !!! | TGTAATTTGAATTTATTTTT+TGG | + | chr3.4:92422182-92422201 | MS.gene80177:intron | 10.0% |
| !! | AAACATACTTAAGTAAATTT+CGG | - | chr3.4:92421594-92421613 | None:intergenic | 15.0% |
| !! | AATATTATGTCTTTATTCTT+TGG | + | chr3.4:92423528-92423547 | MS.gene80177:intron | 15.0% |
| !! | CTTTATATATTAAAGAGAAA+AGG | - | chr3.4:92421550-92421569 | None:intergenic | 15.0% |
| !!! | AAAATAATAATTGATTTCCT+TGG | + | chr3.4:92423787-92423806 | MS.gene80177:intron | 15.0% |
| !!! | AAATAATAATTGATTTCCTT+GGG | + | chr3.4:92423788-92423807 | MS.gene80177:intron | 15.0% |
| !! | AATTGAGATATATCAAAGAT+AGG | - | chr3.4:92423066-92423085 | None:intergenic | 20.0% |
| !! | GAATAAGATATACAAAACAA+AGG | - | chr3.4:92421522-92421541 | None:intergenic | 20.0% |
| !! | TAATACTTCATCTTCTTATT+AGG | - | chr3.4:92423904-92423923 | None:intergenic | 20.0% |
| !! | TAGAAAAATAATTAAGCAGA+AGG | - | chr3.4:92423675-92423694 | None:intergenic | 20.0% |
| !!! | AGATTTTTTATAGGATTTGA+GGG | + | chr3.4:92423014-92423033 | MS.gene80177:intron | 20.0% |
| !!! | ATTTCAGATTTTAGTTTAGA+GGG | - | chr3.4:92421795-92421814 | None:intergenic | 20.0% |
| !!! | GAATTTATTTTTTGGAATCA+GGG | + | chr3.4:92422190-92422209 | MS.gene80177:intron | 20.0% |
| !!! | TGAATTTATTTTTTGGAATC+AGG | + | chr3.4:92422189-92422208 | MS.gene80177:intron | 20.0% |
| ! | AAAAATAGCAGAATGCTTAT+CGG | - | chr3.4:92424006-92424025 | None:intergenic | 25.0% |
| ! | AAACTTACAGTGTTTATATC+TGG | - | chr3.4:92423159-92423178 | None:intergenic | 25.0% |
| ! | ACCATGCATTATACTATTTA+TGG | - | chr3.4:92423263-92423282 | None:intergenic | 25.0% |
| ! | AGGTAAGATTTGAAAATGTT+TGG | + | chr3.4:92420922-92420941 | MS.gene80177:intron | 25.0% |
| ! | AGTGTAATTTACTCATATAG+AGG | - | chr3.4:92423579-92423598 | None:intergenic | 25.0% |
| ! | ATAAGATAAACAAGTTCAGT+GGG | + | chr3.4:92421910-92421929 | MS.gene80177:CDS | 25.0% |
| ! | ATGATAAACCATATCTAAGA+CGG | - | chr3.4:92420292-92420311 | None:intergenic | 25.0% |
| ! | ATTAATAGGATTTCCATTCT+AGG | + | chr3.4:92423488-92423507 | MS.gene80177:intron | 25.0% |
| ! | CATGATCATAACTAACAAAT+AGG | - | chr3.4:92421682-92421701 | None:intergenic | 25.0% |
| ! | CATTGTTTGAAAAGATTCAA+AGG | + | chr3.4:92420560-92420579 | MS.gene80177:intron | 25.0% |
| ! | CCATGCATTATACTATTTAT+GGG | - | chr3.4:92423262-92423281 | None:intergenic | 25.0% |
| ! | CTCTAAACTAAAATCTGAAA+TGG | + | chr3.4:92421794-92421813 | MS.gene80177:intron | 25.0% |
| ! | GATATATCTCAATTCATTGT+AGG | + | chr3.4:92423072-92423091 | MS.gene80177:intron | 25.0% |
| ! | GATTATAATTGGAAAAAGAG+GGG | - | chr3.4:92422781-92422800 | None:intergenic | 25.0% |
| ! | GATTATTGAGATCTGTAAAT+TGG | - | chr3.4:92421201-92421220 | None:intergenic | 25.0% |
| ! | GGATTATAATTGGAAAAAGA+GGG | - | chr3.4:92422782-92422801 | None:intergenic | 25.0% |
| ! | TTGTGTAAATAAGTGACAAT+TGG | + | chr3.4:92421429-92421448 | MS.gene80177:intron | 25.0% |
| ! | TTTCTAAGTTACAAATCTTG+CGG | + | chr3.4:92422531-92422550 | MS.gene80177:intron | 25.0% |
| !! | AAACTTAAAAGCGTAATTGA+TGG | - | chr3.4:92420626-92420645 | None:intergenic | 25.0% |
| !! | ATTTTCAATACTATGCAGAA+TGG | + | chr3.4:92421836-92421855 | MS.gene80177:intron | 25.0% |
| !! | CACATTTTCCATTTTCTTTA+TGG | + | chr3.4:92423231-92423250 | MS.gene80177:intron | 25.0% |
| !! | CTATTTGTTAGTTATGATCA+TGG | + | chr3.4:92421680-92421699 | MS.gene80177:intron | 25.0% |
| !! | GACAAATCATTTTCAAAAAG+AGG | - | chr3.4:92422481-92422500 | None:intergenic | 25.0% |
| !! | GTTTTTACTGATAATCCAAA+TGG | - | chr3.4:92421500-92421519 | None:intergenic | 25.0% |
| !! | TTACCTGAAAATTTTGGATT+CGG | - | chr3.4:92421271-92421290 | None:intergenic | 25.0% |
| !!! | CATTTCAGATTTTAGTTTAG+AGG | - | chr3.4:92421796-92421815 | None:intergenic | 25.0% |
| !!! | GAGATTTTTTATAGGATTTG+AGG | + | chr3.4:92423013-92423032 | MS.gene80177:intron | 25.0% |
| !!! | GATAAGTCTACTTCATTTTT+TGG | + | chr3.4:92420881-92420900 | MS.gene80177:CDS | 25.0% |
| !!! | GATTTTTTATAGGATTTGAG+GGG | + | chr3.4:92423015-92423034 | MS.gene80177:intron | 25.0% |
| !!! | GTGGTATATTTGTTGATTTT+GGG | + | chr3.4:92420449-92420468 | MS.gene80177:intron | 25.0% |
| !!! | TCTTCAGAGAGATTTTTTAT+AGG | + | chr3.4:92423005-92423024 | MS.gene80177:intron | 25.0% |
| !!! | TGTGGTATATTTGTTGATTT+TGG | + | chr3.4:92420448-92420467 | MS.gene80177:intron | 25.0% |
| !!! | TTTCAGATTTTAGTTTAGAG+GGG | - | chr3.4:92421794-92421813 | None:intergenic | 25.0% |
| !!! | TTTGATTCTGGAATTAGTTT+CGG | + | chr3.4:92423735-92423754 | MS.gene80177:intron | 25.0% |
| !!! | TTTGTTTTGACACTTGTTAT+AGG | + | chr3.4:92423321-92423340 | MS.gene80177:intron | 25.0% |
| AAAAATGAAGCATACTTAGC+TGG | + | chr3.4:92421337-92421356 | MS.gene80177:CDS | 30.0% | |
| AAGGAAAGAATCTTAAAAGC+TGG | + | chr3.4:92422639-92422658 | MS.gene80177:CDS | 30.0% | |
| AATGGAACTTAGTTATGAAC+TGG | + | chr3.4:92421812-92421831 | MS.gene80177:intron | 30.0% | |
| ACAACTTAGTTGGATATACT+TGG | + | chr3.4:92422051-92422070 | MS.gene80177:intron | 30.0% | |
| AGTTTATGTGTATCACTTAG+TGG | - | chr3.4:92423199-92423218 | None:intergenic | 30.0% | |
| ATGATATTGAATGCAGTACT+TGG | + | chr3.4:92423972-92423991 | MS.gene80177:intron | 30.0% | |
| CCCATAAATAGTATAATGCA+TGG | + | chr3.4:92423259-92423278 | MS.gene80177:intron | 30.0% | |
| CGGATTATAATTGGAAAAAG+AGG | - | chr3.4:92422783-92422802 | None:intergenic | 30.0% | |
| CTAGACGTTATAAAAGACAA+TGG | - | chr3.4:92424152-92424171 | None:intergenic | 30.0% | |
| GAGAGATATTGATGTTATCA+GGG | + | chr3.4:92420506-92420525 | MS.gene80177:intron | 30.0% | |
| GATAAGATAAACAAGTTCAG+TGG | + | chr3.4:92421909-92421928 | MS.gene80177:CDS | 30.0% | |
| GTCACTTATTTACACAATAC+AGG | - | chr3.4:92421426-92421445 | None:intergenic | 30.0% | |
| TACAGTGTTTATATCTGGAT+TGG | - | chr3.4:92423154-92423173 | None:intergenic | 30.0% | |
| TACTTAAGTATGTTTCATGC+TGG | + | chr3.4:92421599-92421618 | MS.gene80177:intron | 30.0% | |
| TATGGTTTATCATCAATGCA+AGG | + | chr3.4:92420299-92420318 | MS.gene80177:CDS | 30.0% | |
| TATTGATGTTATCAGGGTAA+CGG | + | chr3.4:92420512-92420531 | MS.gene80177:intron | 30.0% | |
| TCACAACATTCAGAATCATA+TGG | - | chr3.4:92423424-92423443 | None:intergenic | 30.0% | |
| TGAGAGATATTGATGTTATC+AGG | + | chr3.4:92420505-92420524 | MS.gene80177:intron | 30.0% | |
| TGCAATTTCAGGAATATATG+TGG | + | chr3.4:92420597-92420616 | MS.gene80177:intron | 30.0% | |
| TGTCATAGTTATTCAGAGAT+TGG | + | chr3.4:92423937-92423956 | MS.gene80177:intron | 30.0% | |
| TTACTGATAATCCAAATGGA+AGG | - | chr3.4:92421496-92421515 | None:intergenic | 30.0% | |
| TTGTGATGAAGATGAGTTTA+TGG | + | chr3.4:92423351-92423370 | MS.gene80177:CDS | 30.0% | |
| ! | ATCAGAAAACTTTTCGGTTT+TGG | - | chr3.4:92420255-92420274 | None:intergenic | 30.0% |
| ! | GTTGGATATACTTGGTAATT+AGG | + | chr3.4:92422059-92422078 | MS.gene80177:intron | 30.0% |
| ! | TCAGAAAACTTTTCGGTTTT+GGG | - | chr3.4:92420254-92420273 | None:intergenic | 30.0% |
| ! | TGAAAAGTGCATAAGCTTAA+GGG | + | chr3.4:92421015-92421034 | MS.gene80177:intron | 30.0% |
| ! | TTACCGAATCCAAAATTTTC+AGG | + | chr3.4:92421265-92421284 | MS.gene80177:intron | 30.0% |
| ! | TTTCCTTGTATGCTGTATTT+TGG | + | chr3.4:92422898-92422917 | MS.gene80177:intron | 30.0% |
| !! | ATTGATGGTGTAAAATGGAA+TGG | + | chr3.4:92421047-92421066 | MS.gene80177:intron | 30.0% |
| !! | TAAAAAAGCTTGTTGAAGAG+AGG | - | chr3.4:92421374-92421393 | None:intergenic | 30.0% |
| !! | TATTAACCGAGTTGATGATT+GGG | + | chr3.4:92421974-92421993 | MS.gene80177:CDS | 30.0% |
| !! | TTTGGATTGATGGTGTAAAA+TGG | + | chr3.4:92421042-92421061 | MS.gene80177:intron | 30.0% |
| !!! | CTCTTCAACAAGCTTTTTTA+AGG | + | chr3.4:92421374-92421393 | MS.gene80177:CDS | 30.0% |
| !!! | CTTCATTTTTTAGCATCTGT+TGG | - | chr3.4:92421327-92421346 | None:intergenic | 30.0% |
| !!! | GAATCCAAAATTTTCAGGTA+AGG | + | chr3.4:92421270-92421289 | MS.gene80177:intron | 30.0% |
| !!! | TCATTTTTTGGCGTTTATGA+TGG | + | chr3.4:92420893-92420912 | MS.gene80177:CDS | 30.0% |
| !!! | TTCAGATTTTAGTTTAGAGG+GGG | - | chr3.4:92421793-92421812 | None:intergenic | 30.0% |
| AAAAAAGTTCACAATCCCAG+AGG | - | chr3.4:92422728-92422747 | None:intergenic | 35.0% | |
| AAAAAGAGGGGCAACAAAAA+TGG | - | chr3.4:92422769-92422788 | None:intergenic | 35.0% | |
| AACATCAATATCTCTCAACC+AGG | - | chr3.4:92420502-92420521 | None:intergenic | 35.0% | |
| AATCATCATCAGCACAACAA+TGG | - | chr3.4:92420708-92420727 | None:intergenic | 35.0% | |
| ACATCAATATCTCTCAACCA+GGG | - | chr3.4:92420501-92420520 | None:intergenic | 35.0% | |
| ACTCACATAAACAAGCATGT+CGG | - | chr3.4:92422134-92422153 | None:intergenic | 35.0% | |
| AGCCTCATTCAACATTTCTA+CGG | + | chr3.4:92420402-92420421 | MS.gene80177:intron | 35.0% | |
| AGTTCATGAACTACTGTGTT+TGG | + | chr3.4:92423853-92423872 | MS.gene80177:CDS | 35.0% | |
| ATCCAGTCAATTGCAATTTC+AGG | + | chr3.4:92420586-92420605 | MS.gene80177:intron | 35.0% | |
| ATCCTGAGCTAAAGATACAA+AGG | - | chr3.4:92422833-92422852 | None:intergenic | 35.0% | |
| ATGTCTTTATTCTTTGGCGT+GGG | + | chr3.4:92423534-92423553 | MS.gene80177:intron | 35.0% | |
| ATTAAAGCCTAGTGCATCAA+CGG | - | chr3.4:92424127-92424146 | None:intergenic | 35.0% | |
| ATTCGCGTTGTGTAATATCT+CGG | + | chr3.4:92422305-92422324 | MS.gene80177:CDS | 35.0% | |
| ATTGATGTTATCAGGGTAAC+GGG | + | chr3.4:92420513-92420532 | MS.gene80177:intron | 35.0% | |
| ATTTCACGTAATGCACTAGA+AGG | + | chr3.4:92424173-92424192 | MS.gene80177:intron | 35.0% | |
| ATTTGCAAAAGTTGCAAGTG+TGG | - | chr3.4:92421153-92421172 | None:intergenic | 35.0% | |
| CAACAGTATCACAACTTAGT+TGG | + | chr3.4:92422041-92422060 | MS.gene80177:intron | 35.0% | |
| CACAATGGAAAGTAGACATT+TGG | - | chr3.4:92420997-92421016 | None:intergenic | 35.0% | |
| CACATCACATTTCTTTACCA+TGG | + | chr3.4:92424078-92424097 | MS.gene80177:intron | 35.0% | |
| GAAAATGACCGTCTTAGATA+TGG | + | chr3.4:92420281-92420300 | MS.gene80177:CDS | 35.0% | |
| GAAAGAATCTTAAAAGCTGG+TGG | + | chr3.4:92422642-92422661 | MS.gene80177:CDS | 35.0% | |
| GAACCAAAATACAGCATACA+AGG | - | chr3.4:92422904-92422923 | None:intergenic | 35.0% | |
| GCAATGAAATATCATGCTCT+TGG | + | chr3.4:92422088-92422107 | MS.gene80177:intron | 35.0% | |
| GGGATCTACCATAAAGAAAA+TGG | - | chr3.4:92423242-92423261 | None:intergenic | 35.0% | |
| GGTGTAAAATGGAATGGAAT+AGG | + | chr3.4:92421053-92421072 | MS.gene80177:intron | 35.0% | |
| GTATGCTGCATATACTAATC+TGG | + | chr3.4:92420749-92420768 | MS.gene80177:intron | 35.0% | |
| GTCTTACTATTGTTGACACT+TGG | + | chr3.4:92423712-92423731 | MS.gene80177:intron | 35.0% | |
| GTTTCATGCTGGACTAATTT+GGG | + | chr3.4:92421610-92421629 | MS.gene80177:intron | 35.0% | |
| GTTTCTAATAACTGCAACAC+AGG | - | chr3.4:92422257-92422276 | None:intergenic | 35.0% | |
| TATGTCTTTATTCTTTGGCG+TGG | + | chr3.4:92423533-92423552 | MS.gene80177:intron | 35.0% | |
| TATTTACACAATACAGGCAG+AGG | - | chr3.4:92421420-92421439 | None:intergenic | 35.0% | |
| TCAATTCATTGTAGGTGACA+TGG | + | chr3.4:92423080-92423099 | MS.gene80177:intron | 35.0% | |
| TCATCAGCATACTAATGAAG+TGG | - | chr3.4:92420814-92420833 | None:intergenic | 35.0% | |
| TGATAACATGACCATGATCT+TGG | + | chr3.4:92424322-92424341 | MS.gene80177:CDS | 35.0% | |
| TGTTTCATGCTGGACTAATT+TGG | + | chr3.4:92421609-92421628 | MS.gene80177:intron | 35.0% | |
| TGTTTGGCTACTTGAATTGA+TGG | + | chr3.4:92420938-92420957 | MS.gene80177:intron | 35.0% | |
| TTAAACCTTGCAAGAGCTAT+TGG | + | chr3.4:92422696-92422715 | MS.gene80177:CDS | 35.0% | |
| TTCCTGAAATTGCAATTGAC+TGG | - | chr3.4:92420591-92420610 | None:intergenic | 35.0% | |
| TTTGCAAAAGTTGCAAGTGT+GGG | - | chr3.4:92421152-92421171 | None:intergenic | 35.0% | |
| ! | ACCACCTTACCTGAAAATTT+TGG | - | chr3.4:92421277-92421296 | None:intergenic | 35.0% |
| ! | ACCGAAAAGTTTTCTGATGA+CGG | + | chr3.4:92420257-92420276 | MS.gene80177:CDS | 35.0% |
| ! | AGCTTATGCACTTTTCACAA+TGG | - | chr3.4:92421012-92421031 | None:intergenic | 35.0% |
| ! | CACTTGCAACTTTTGCAAAT+AGG | + | chr3.4:92421153-92421172 | MS.gene80177:intron | 35.0% |
| ! | GAAAATGATTTGTCTCTCTC+TGG | + | chr3.4:92422487-92422506 | MS.gene80177:intron | 35.0% |
| ! | GATTTCCTTGGGTTATTTCA+GGG | + | chr3.4:92423799-92423818 | MS.gene80177:intron | 35.0% |
| ! | GTGAAAAGTGCATAAGCTTA+AGG | + | chr3.4:92421014-92421033 | MS.gene80177:intron | 35.0% |
| ! | GTGACAATTGGTTTCATGTT+TGG | + | chr3.4:92421441-92421460 | MS.gene80177:intron | 35.0% |
| ! | TAACTACAGCTCTTTTCTGT+AGG | + | chr3.4:92422572-92422591 | MS.gene80177:intron | 35.0% |
| ! | TCTCTGAAGAAATCAGTGTT+AGG | - | chr3.4:92422995-92423014 | None:intergenic | 35.0% |
| ! | TGATTTCCTTGGGTTATTTC+AGG | + | chr3.4:92423798-92423817 | MS.gene80177:intron | 35.0% |
| !! | ATTTCCATTCTAGAGTTACC+TGG | - | chr3.4:92422336-92422355 | None:intergenic | 35.0% |
| !! | GTATTAACCGAGTTGATGAT+TGG | + | chr3.4:92421973-92421992 | MS.gene80177:CDS | 35.0% |
| !! | GTTTTAGTATGTGAGGATTG+TGG | + | chr3.4:92420430-92420449 | MS.gene80177:intron | 35.0% |
| !! | TATGTTTGGATTGGTGGTAT+AGG | - | chr3.4:92421128-92421147 | None:intergenic | 35.0% |
| !!! | CTGTATTTTGGTTCTTCACA+AGG | + | chr3.4:92422910-92422929 | MS.gene80177:intron | 35.0% |
| !!! | GGGTATTGTTTTAGTATGTG+AGG | + | chr3.4:92420423-92420442 | MS.gene80177:intron | 35.0% |
| !!! | TCCAAAATTTTCAGGTAAGG+TGG | + | chr3.4:92421273-92421292 | MS.gene80177:intron | 35.0% |
| !!! | TCGTGTTTTGGTGTTTATGA+TGG | + | chr3.4:92420783-92420802 | MS.gene80177:intron | 35.0% |
| AAGTTCAGTGGGATGATAGA+AGG | + | chr3.4:92421921-92421940 | MS.gene80177:CDS | 40.0% | |
| AATAGCAGAATGCTTATCGG+TGG | - | chr3.4:92424003-92424022 | None:intergenic | 40.0% | |
| ACCCGTAGAAATGTTGAATG+AGG | - | chr3.4:92420407-92420426 | None:intergenic | 40.0% | |
| ACCTGATCTTGAGATTGAGA+AGG | + | chr3.4:92422620-92422639 | MS.gene80177:CDS | 40.0% | |
| ACTTCGCTTCTTTCCACTTT+CGG | - | chr3.4:92424431-92424450 | None:intergenic | 40.0% | |
| AGGATTTGAGGGGTGAAATT+GGG | + | chr3.4:92423025-92423044 | MS.gene80177:intron | 40.0% | |
| AGTGGAAAGAAGCGAAGTTT+AGG | + | chr3.4:92424433-92424452 | MS.gene80177:CDS | 40.0% | |
| AGTTACCAATAGCTCTTGCA+AGG | - | chr3.4:92422704-92422723 | None:intergenic | 40.0% | |
| AGTTCAGTGGGATGATAGAA+GGG | + | chr3.4:92421922-92421941 | MS.gene80177:CDS | 40.0% | |
| ATCACATGTTGAACCGAAAG+TGG | + | chr3.4:92424415-92424434 | MS.gene80177:CDS | 40.0% | |
| CAATCTCAAGATCAGGTTTG+TGG | - | chr3.4:92422617-92422636 | None:intergenic | 40.0% | |
| CACATTTCTTTACCATGGAC+AGG | + | chr3.4:92424083-92424102 | MS.gene80177:intron | 40.0% | |
| CAGCATTTGCAACAACAACT+TGG | - | chr3.4:92422282-92422301 | None:intergenic | 40.0% | |
| CGTTGTGTAATATCTCGGAA+GGG | + | chr3.4:92422310-92422329 | MS.gene80177:CDS | 40.0% | |
| CTCACATAAACAAGCATGTC+GGG | - | chr3.4:92422133-92422152 | None:intergenic | 40.0% | |
| CTGCTTGTCAAGTCAACAAT+TGG | + | chr3.4:92423823-92423842 | MS.gene80177:CDS | 40.0% | |
| GAGCATGATATTTCATTGCC+AGG | - | chr3.4:92422087-92422106 | None:intergenic | 40.0% | |
| GCAGCATACTAACAAACGAA+AGG | - | chr3.4:92420738-92420757 | None:intergenic | 40.0% | |
| GCATACTTAGCTGGAGATAT+AGG | + | chr3.4:92421346-92421365 | MS.gene80177:CDS | 40.0% | |
| GCCTCATTCAACATTTCTAC+GGG | + | chr3.4:92420403-92420422 | MS.gene80177:intron | 40.0% | |
| GCTGCATATACTAATCTGGA+TGG | + | chr3.4:92420753-92420772 | MS.gene80177:intron | 40.0% | |
| GCTGTTCAAAACCTTCCATT+TGG | + | chr3.4:92421482-92421501 | MS.gene80177:intron | 40.0% | |
| GTTACTTGACTACTGCACAT+TGG | + | chr3.4:92422442-92422461 | MS.gene80177:intron | 40.0% | |
| GTTTATCATCAATGCAAGGC+TGG | + | chr3.4:92420303-92420322 | MS.gene80177:CDS | 40.0% | |
| TAGGATTTGAGGGGTGAAAT+TGG | + | chr3.4:92423024-92423043 | MS.gene80177:intron | 40.0% | |
| TCAACGGATGTAGAACATCA+TGG | - | chr3.4:92424111-92424130 | None:intergenic | 40.0% | |
| TCATGTCTACTCGGTAATGT+TGG | - | chr3.4:92421740-92421759 | None:intergenic | 40.0% | |
| TCCATCAGTGTCTATACATG+AGG | - | chr3.4:92423607-92423626 | None:intergenic | 40.0% | |
| TCCATTCTAGGCACACATAT+AGG | + | chr3.4:92423500-92423519 | MS.gene80177:intron | 40.0% | |
| TCCTCATGTATAGACACTGA+TGG | + | chr3.4:92423603-92423622 | MS.gene80177:intron | 40.0% | |
| TCCTTCTCAATCTCAAGATC+AGG | - | chr3.4:92422624-92422643 | None:intergenic | 40.0% | |
| TGGTATAGGATGGAATGGTA+TGG | - | chr3.4:92421114-92421133 | None:intergenic | 40.0% | |
| TGTCACACTTCATGTCTACT+CGG | - | chr3.4:92421749-92421768 | None:intergenic | 40.0% | |
| TTCTAGACACATGTGAGTTG+AGG | + | chr3.4:92423690-92423709 | MS.gene80177:intron | 40.0% | |
| TTGCAAAAGTTGCAAGTGTG+GGG | - | chr3.4:92421151-92421170 | None:intergenic | 40.0% | |
| TTGCTTGCAATTAGTGTGAG+AGG | + | chr3.4:92424024-92424043 | MS.gene80177:intron | 40.0% | |
| TTTAAGAAAGGCAGTACGAG+AGG | - | chr3.4:92423770-92423789 | None:intergenic | 40.0% | |
| TTTGAACTGCACCAAGATCA+TGG | - | chr3.4:92424336-92424355 | None:intergenic | 40.0% | |
| TTTGGCGTTTATGATGGTCA+TGG | + | chr3.4:92420899-92420918 | MS.gene80177:CDS | 40.0% | |
| ! | AGCTATTGGTAACTTCCTCT+GGG | + | chr3.4:92422710-92422729 | MS.gene80177:intron | 40.0% |
| ! | ATACTTGGTAATTAGGTGCC+TGG | + | chr3.4:92422066-92422085 | MS.gene80177:intron | 40.0% |
| ! | ATTGGTGGTATAGGATGGAA+TGG | - | chr3.4:92421119-92421138 | None:intergenic | 40.0% |
| ! | CAAGTTGTTGTTGCAAATGC+TGG | + | chr3.4:92422280-92422299 | MS.gene80177:CDS | 40.0% |
| ! | CATAAGCTTAAGGGTGTGTT+TGG | + | chr3.4:92421024-92421043 | MS.gene80177:intron | 40.0% |
| ! | GCCGTCATCAGAAAACTTTT+CGG | - | chr3.4:92420261-92420280 | None:intergenic | 40.0% |
| ! | GGATGATAGAAGGGTTGATT+TGG | + | chr3.4:92421931-92421950 | MS.gene80177:CDS | 40.0% |
| ! | GTTGACACTTGGTTTGATTC+TGG | + | chr3.4:92423723-92423742 | MS.gene80177:intron | 40.0% |
| ! | TAAGGGTGTGTTTGGATTGA+TGG | + | chr3.4:92421032-92421051 | MS.gene80177:intron | 40.0% |
| ! | TTAATACCATTGCTGCTTCG+TGG | - | chr3.4:92421960-92421979 | None:intergenic | 40.0% |
| ! | TTCACAAGGCATTAGGAGTT+TGG | + | chr3.4:92422924-92422943 | MS.gene80177:intron | 40.0% |
| ! | TTGGTTCTTCACAAGGCATT+AGG | + | chr3.4:92422917-92422936 | MS.gene80177:intron | 40.0% |
| ! | TTTATGGTGCTAGCTTGTGA+TGG | + | chr3.4:92423367-92423386 | MS.gene80177:CDS | 40.0% |
| !! | GTTACAACTTGCTTTTCAGC+AGG | - | chr3.4:92423129-92423148 | None:intergenic | 40.0% |
| !! | TGTGTGAAAGAGTACTTGAC+CGG | + | chr3.4:92424264-92424283 | MS.gene80177:CDS | 40.0% |
| !! | TTTGGATTGGTGGTATAGGA+TGG | - | chr3.4:92421124-92421143 | None:intergenic | 40.0% |
| AACATCATGGATCCTGTCCA+TGG | - | chr3.4:92424098-92424117 | None:intergenic | 45.0% | |
| ACGTAATGCACTAGAAGGTC+TGG | + | chr3.4:92424178-92424197 | MS.gene80177:intron | 45.0% | |
| AGAATGGATGAGATGATGCG+TGG | + | chr3.4:92421852-92421871 | MS.gene80177:intron | 45.0% | |
| AGTGTGGGGTATGTTTGGAT+TGG | - | chr3.4:92421137-92421156 | None:intergenic | 45.0% | |
| ATGGAGGGAGCTATCAATCT+TGG | + | chr3.4:92421884-92421903 | MS.gene80177:CDS | 45.0% | |
| ATTCATGCAGGACGAGTGAA+CGG | + | chr3.4:92422669-92422688 | MS.gene80177:CDS | 45.0% | |
| CAAAGGCCCAATCATCAACT+CGG | - | chr3.4:92421983-92422002 | None:intergenic | 45.0% | |
| CTCAACCAGGGTGATAAGTT+AGG | - | chr3.4:92420489-92420508 | None:intergenic | 45.0% | |
| GAGGTAGGTCTGACATTTGA+AGG | + | chr3.4:92422005-92422024 | MS.gene80177:intron | 45.0% | |
| GATGATGATTGCTCTTCTGC+AGG | - | chr3.4:92424380-92424399 | None:intergenic | 45.0% | |
| GCATGCTGCATATACTGATC+TGG | + | chr3.4:92420859-92420878 | MS.gene80177:intron | 45.0% | |
| GCCTATATGTGTGCCTAGAA+TGG | - | chr3.4:92423504-92423523 | None:intergenic | 45.0% | |
| GCGTTGTGTAATATCTCGGA+AGG | + | chr3.4:92422309-92422328 | MS.gene80177:CDS | 45.0% | |
| GCTGGACTAATTTGGGAGTA+TGG | + | chr3.4:92421617-92421636 | MS.gene80177:intron | 45.0% | |
| GGTCCAGCAAAATCAGAATG+AGG | - | chr3.4:92422217-92422236 | None:intergenic | 45.0% | |
| GGTTCAACATGTGATTCAGC+TGG | - | chr3.4:92424410-92424429 | None:intergenic | 45.0% | |
| TCTACATCCGTTGATGCACT+AGG | + | chr3.4:92424117-92424136 | MS.gene80177:intron | 45.0% | |
| TGGAGGGAGCTATCAATCTT+GGG | + | chr3.4:92421885-92421904 | MS.gene80177:CDS | 45.0% | |
| TTCCAATTATAATCCGCCCC+CGG | + | chr3.4:92422787-92422806 | MS.gene80177:intron | 45.0% | |
| TTGCAAGTGTGGGGTATGTT+TGG | - | chr3.4:92421142-92421161 | None:intergenic | 45.0% | |
| ! | GAGCTATTGGTAACTTCCTC+TGG | + | chr3.4:92422709-92422728 | MS.gene80177:intron | 45.0% |
| ! | GATTTTGCTGGACCAACTTC+AGG | + | chr3.4:92422223-92422242 | MS.gene80177:CDS | 45.0% |
| ! | GGACCTCATTCTGATTTTGC+TGG | + | chr3.4:92422211-92422230 | MS.gene80177:CDS | 45.0% |
| ! | GGCCTTTGTATCTTTAGCTC+AGG | + | chr3.4:92422828-92422847 | MS.gene80177:intron | 45.0% |
| ! | TGCTAGCTTGTGATGGCATA+TGG | + | chr3.4:92423374-92423393 | MS.gene80177:CDS | 45.0% |
| !! | AAGAGTACTTGACCGGTGTT+TGG | + | chr3.4:92424271-92424290 | MS.gene80177:CDS | 45.0% |
| !! | AGTTGATGATTGGGCCTTTG+AGG | + | chr3.4:92421983-92422002 | MS.gene80177:CDS | 45.0% |
| !! | CTACTCGGTAATGTTGGTTC+TGG | - | chr3.4:92421734-92421753 | None:intergenic | 45.0% |
| !! | GATGGCTCTACTTCGTGTTT+TGG | + | chr3.4:92420771-92420790 | MS.gene80177:intron | 45.0% |
| !! | GATTTTGGGCACTGCGTAAT+GGG | + | chr3.4:92420463-92420482 | MS.gene80177:intron | 45.0% |
| !! | TGATTTTGGGCACTGCGTAA+TGG | + | chr3.4:92420462-92420481 | MS.gene80177:intron | 45.0% |
| !!! | GCTGGTGGTTTTATTCATGC+AGG | + | chr3.4:92422657-92422676 | MS.gene80177:CDS | 45.0% |
| !! | ATTAAAATGTAATAATTAAT+AGG | + | chr3.4:92423474-92423493 | MS.gene80177:intron | 5.0% |
| !!! | AATTTTTTATAAATTGATTA+AGG | + | chr3.4:92420367-92420386 | MS.gene80177:intron | 5.0% |
| ATGGGCCTAACTTATCACCC+TGG | + | chr3.4:92420481-92420500 | MS.gene80177:intron | 50.0% | |
| GAGATGATGCGTGGTCAAAG+AGG | + | chr3.4:92421861-92421880 | MS.gene80177:CDS | 50.0% | |
| GCAGTCCCTGAAATAACCCA+AGG | - | chr3.4:92423807-92423826 | None:intergenic | 50.0% | |
| GGCGTTTATGATGGTCATGG+AGG | + | chr3.4:92420902-92420921 | MS.gene80177:CDS | 50.0% | |
| TCCAATTATAATCCGCCCCC+GGG | + | chr3.4:92422788-92422807 | MS.gene80177:intron | 50.0% | |
| TGATGCGTGGTCAAAGAGGA+TGG | + | chr3.4:92421865-92421884 | MS.gene80177:CDS | 50.0% | |
| TGTAATATCTCGGAAGGGCC+AGG | + | chr3.4:92422315-92422334 | MS.gene80177:CDS | 50.0% | |
| TGTCAGACCTACCTCCTCAA+AGG | - | chr3.4:92422000-92422019 | None:intergenic | 50.0% | |
| TGTTTGGCACCATCAACTGC+TGG | + | chr3.4:92424287-92424306 | MS.gene80177:CDS | 50.0% | |
| ! | AGGGCCAGGTAACTCTAGAA+TGG | + | chr3.4:92422329-92422348 | MS.gene80177:intron | 50.0% |
| ! | GTGGGGTATGTTTGGATTGG+TGG | - | chr3.4:92421134-92421153 | None:intergenic | 50.0% |
| ! | TGATGATTGGGCCTTTGAGG+AGG | + | chr3.4:92421986-92422005 | MS.gene80177:CDS | 50.0% |
| !! | CAGTTGATGGTGCCAAACAC+CGG | - | chr3.4:92424286-92424305 | None:intergenic | 50.0% |
| AGATACAAAGGCCCTTGCCC+AGG | - | chr3.4:92422821-92422840 | None:intergenic | 55.0% | |
| CAGGCTGTGCTTCCTGAAGT+TGG | - | chr3.4:92422238-92422257 | None:intergenic | 55.0% | |
| GCGTGGTCAAAGAGGATGGA+GGG | + | chr3.4:92421869-92421888 | MS.gene80177:CDS | 55.0% | |
| TGCGTGGTCAAAGAGGATGG+AGG | + | chr3.4:92421868-92421887 | MS.gene80177:CDS | 55.0% | |
| TGGTCTCCACGAAGCAGCAA+TGG | + | chr3.4:92421951-92421970 | MS.gene80177:CDS | 55.0% | |
| TTGCTCTTCTGCAGGTGCAC+TGG | - | chr3.4:92424372-92424391 | None:intergenic | 55.0% | |
| TTGGCACCATCAACTGCTGG+TGG | + | chr3.4:92424290-92424309 | MS.gene80177:CDS | 55.0% | |
| ! | GATTGGGCCTTTGAGGAGGT+AGG | + | chr3.4:92421990-92422009 | MS.gene80177:intron | 55.0% |
| !! | ACCCGGGGGCGGATTATAAT+TGG | - | chr3.4:92422792-92422811 | None:intergenic | 55.0% |
| CCTTCGCCACCAGCAGTTGA+TGG | - | chr3.4:92424299-92424318 | None:intergenic | 60.0% | |
| GCAAGGCTGGCGTGCATCAA+TGG | + | chr3.4:92420316-92420335 | MS.gene80177:CDS | 60.0% | |
| ! | CCATCAACTGCTGGTGGCGA+AGG | + | chr3.4:92424296-92424315 | MS.gene80177:CDS | 60.0% |
| CCTTGCCCAGGTTGCTCACC+CGG | - | chr3.4:92422809-92422828 | None:intergenic | 65.0% | |
| CGGGTGAGCAACCTGGGCAA+GGG | + | chr3.4:92422807-92422826 | MS.gene80177:intron | 65.0% | |
| CTTGCCCAGGTTGCTCACCC+GGG | - | chr3.4:92422808-92422827 | None:intergenic | 65.0% | |
| GCAGGTGCACTGGACTGAGC+AGG | - | chr3.4:92424362-92424381 | None:intergenic | 65.0% | |
| TTGCCCAGGTTGCTCACCCG+GGG | - | chr3.4:92422807-92422826 | None:intergenic | 65.0% | |
| CCGGGTGAGCAACCTGGGCA+AGG | + | chr3.4:92422806-92422825 | MS.gene80177:intron | 70.0% | |
| TGCCCAGGTTGCTCACCCGG+GGG | - | chr3.4:92422806-92422825 | None:intergenic | 70.0% | |
| CCAGGTTGCTCACCCGGGGG+CGG | - | chr3.4:92422803-92422822 | None:intergenic | 75.0% | |
| CGCCCCCGGGTGAGCAACCT+GGG | + | chr3.4:92422801-92422820 | MS.gene80177:intron | 75.0% | |
| ! | CCGCCCCCGGGTGAGCAACC+TGG | + | chr3.4:92422800-92422819 | MS.gene80177:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 92420230 | 92424454 | 92420230 | ID=MS.gene80177 |
| chr3.4 | mRNA | 92420230 | 92424454 | 92420230 | ID=MS.gene80177.t1;Parent=MS.gene80177 |
| chr3.4 | exon | 92420230 | 92420346 | 92420230 | ID=MS.gene80177.t1.exon1;Parent=MS.gene80177.t1 |
| chr3.4 | CDS | 92420230 | 92420346 | 92420230 | ID=cds.MS.gene80177.t1;Parent=MS.gene80177.t1 |
| chr3.4 | exon | 92420860 | 92420923 | 92420860 | ID=MS.gene80177.t1.exon2;Parent=MS.gene80177.t1 |
| chr3.4 | CDS | 92420860 | 92420923 | 92420860 | ID=cds.MS.gene80177.t1;Parent=MS.gene80177.t1 |
| chr3.4 | exon | 92421287 | 92421395 | 92421287 | ID=MS.gene80177.t1.exon3;Parent=MS.gene80177.t1 |
| chr3.4 | CDS | 92421287 | 92421395 | 92421287 | ID=cds.MS.gene80177.t1;Parent=MS.gene80177.t1 |
| chr3.4 | exon | 92421854 | 92422007 | 92421854 | ID=MS.gene80177.t1.exon4;Parent=MS.gene80177.t1 |
| chr3.4 | CDS | 92421854 | 92422007 | 92421854 | ID=cds.MS.gene80177.t1;Parent=MS.gene80177.t1 |
| chr3.4 | exon | 92422211 | 92422336 | 92422211 | ID=MS.gene80177.t1.exon5;Parent=MS.gene80177.t1 |
| chr3.4 | CDS | 92422211 | 92422336 | 92422211 | ID=cds.MS.gene80177.t1;Parent=MS.gene80177.t1 |
| chr3.4 | exon | 92422594 | 92422717 | 92422594 | ID=MS.gene80177.t1.exon6;Parent=MS.gene80177.t1 |
| chr3.4 | CDS | 92422594 | 92422717 | 92422594 | ID=cds.MS.gene80177.t1;Parent=MS.gene80177.t1 |
| chr3.4 | exon | 92423094 | 92423170 | 92423094 | ID=MS.gene80177.t1.exon7;Parent=MS.gene80177.t1 |
| chr3.4 | CDS | 92423094 | 92423170 | 92423094 | ID=cds.MS.gene80177.t1;Parent=MS.gene80177.t1 |
| chr3.4 | exon | 92423343 | 92423395 | 92423343 | ID=MS.gene80177.t1.exon8;Parent=MS.gene80177.t1 |
| chr3.4 | CDS | 92423343 | 92423395 | 92423343 | ID=cds.MS.gene80177.t1;Parent=MS.gene80177.t1 |
| chr3.4 | exon | 92423820 | 92423874 | 92423820 | ID=MS.gene80177.t1.exon9;Parent=MS.gene80177.t1 |
| chr3.4 | CDS | 92423820 | 92423874 | 92423820 | ID=cds.MS.gene80177.t1;Parent=MS.gene80177.t1 |
| chr3.4 | exon | 92424245 | 92424454 | 92424245 | ID=MS.gene80177.t1.exon10;Parent=MS.gene80177.t1 |
| chr3.4 | CDS | 92424245 | 92424454 | 92424245 | ID=cds.MS.gene80177.t1;Parent=MS.gene80177.t1 |
| Gene Sequence |
| Protein sequence |
