AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene35588

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35588.t1 MTR_3g074610 99.645 282 1 0 1 282 1 282 0.0 582
MS.gene35588.t1 MTR_5g063940 81.915 282 51 0 1 282 1 282 1.85e-178 493
MS.gene35588.t1 MTR_4g094208 75.177 282 65 1 1 282 1 277 4.07e-162 451
MS.gene35588.t1 MTR_2g008850 72.695 282 76 1 1 282 1 281 2.97e-152 426
MS.gene35588.t1 MTR_5g063940 82.979 235 40 0 48 282 1 235 9.26e-147 411
MS.gene35588.t1 MTR_2g008850 77.872 235 52 0 48 282 1 235 6.34e-137 386
MS.gene35588.t1 MTR_2g078760 60.150 266 105 1 17 282 69 333 4.05e-111 324
MS.gene35588.t1 MTR_2g078760 61.600 250 96 0 33 282 5 254 1.04e-110 320
MS.gene35588.t1 MTR_8g463130 58.209 268 111 1 14 281 15 281 1.90e-107 313
MS.gene35588.t1 MTR_8g463130 59.600 250 101 0 33 282 5 254 3.80e-106 309
MS.gene35588.t1 MTR_4g094208 74.194 186 43 1 1 186 1 181 1.01e-100 293
MS.gene35588.t1 MTR_2g078760 61.261 222 85 1 17 238 69 289 4.36e-93 277
MS.gene35588.t1 MTR_4g094542 53.441 247 114 1 35 281 119 364 4.44e-88 267
MS.gene35588.t1 MTR_3g105730 42.958 284 155 5 1 281 1 280 3.41e-67 211
MS.gene35588.t1 MTR_1g014640 42.254 284 157 5 1 281 44 323 9.12e-67 211
MS.gene35588.t1 MTR_1g013400 42.254 284 157 5 1 281 44 323 9.12e-67 211
MS.gene35588.t1 MTR_2g078760 58.721 172 70 1 17 188 69 239 5.18e-66 207
MS.gene35588.t1 MTR_3g105730 43.969 257 137 5 28 281 6 258 7.76e-65 204
MS.gene35588.t1 MTR_1g115570 42.688 253 136 6 31 281 92 337 1.37e-62 201
MS.gene35588.t1 MTR_3g091060 40.520 269 153 5 16 281 76 340 1.78e-59 193
MS.gene35588.t1 MTR_5g071550 36.620 284 163 9 9 282 99 375 8.45e-44 153
MS.gene35588.t1 MTR_3g464650 36.396 283 158 11 13 282 42 315 4.15e-40 142
MS.gene35588.t1 MTR_1g086350 36.017 236 123 7 66 279 16 245 4.01e-37 133
MS.gene35588.t1 MTR_5g024340 34.934 229 131 5 65 281 123 345 4.36e-37 135
MS.gene35588.t1 MTR_4g123080 36.287 237 123 8 65 279 94 324 7.92e-37 134
MS.gene35588.t1 MTR_4g123080 36.287 237 123 8 65 279 112 342 1.49e-36 134
MS.gene35588.t1 MTR_1g086350 35.833 240 126 7 62 279 114 347 2.56e-36 133
MS.gene35588.t1 MTR_1g086350 35.833 240 126 7 62 279 98 331 2.86e-36 133
MS.gene35588.t1 MTR_3g107880 35.931 231 129 5 66 282 63 288 1.03e-35 130
MS.gene35588.t1 MTR_4g116420 32.624 282 154 10 28 282 79 351 1.38e-35 131
MS.gene35588.t1 MTR_3g107880 35.593 236 133 5 61 282 115 345 2.68e-35 130
MS.gene35588.t1 MTR_3g107880 35.593 236 133 5 61 282 116 346 2.73e-35 130
MS.gene35588.t1 MTR_3g464700 38.532 218 124 7 36 248 87 299 3.04e-35 129
MS.gene35588.t1 MTR_2g033000 34.322 236 127 7 66 279 100 329 2.20e-34 128
MS.gene35588.t1 MTR_1g075730 30.566 265 158 6 24 281 32 277 1.62e-32 121
MS.gene35588.t1 MTR_1g075730 30.566 265 154 6 24 281 32 273 3.93e-32 120
MS.gene35588.t1 MTR_5g071550 36.638 232 136 8 9 236 99 323 4.18e-32 122
MS.gene35588.t1 MTR_2g040500 32.335 334 150 11 21 282 207 536 3.24e-31 122
MS.gene35588.t1 MTR_4g125810 35.019 257 122 7 66 282 253 504 4.38e-31 121
MS.gene35588.t1 MTR_1g050520 30.769 299 178 9 9 282 351 645 1.24e-30 120
MS.gene35588.t1 MTR_3g105730 39.773 176 101 4 9 181 9 182 4.14e-30 113
MS.gene35588.t1 MTR_6g081850 32.963 270 143 10 46 282 55 319 8.71e-30 114
MS.gene35588.t1 MTR_4g007440 31.615 291 129 11 17 247 6 286 2.48e-29 114
MS.gene35588.t1 MTR_8g102550 34.016 244 128 7 66 282 152 389 2.61e-28 112
MS.gene35588.t1 MTR_1g041475 30.258 271 159 5 18 281 26 273 2.64e-28 109
MS.gene35588.t1 MTR_1g015110 32.558 258 130 7 66 282 290 544 7.00e-28 112
MS.gene35588.t1 MTR_3g104710 34.109 258 126 8 66 282 286 540 4.76e-27 110
MS.gene35588.t1 MTR_3g068200 30.719 306 166 8 18 282 76 376 1.45e-26 107
MS.gene35588.t1 MTR_1g014190 30.108 279 125 11 32 250 21 289 9.05e-26 104
MS.gene35588.t1 MTR_1g014190 30.108 279 125 11 32 250 59 327 1.95e-25 104
MS.gene35588.t1 MTR_5g080680 33.617 235 135 6 32 249 99 329 6.34e-25 102
MS.gene35588.t1 MTR_3g105880 30.545 275 121 12 33 247 22 286 6.59e-25 102
MS.gene35588.t1 MTR_3g105880 30.545 275 121 12 33 247 22 286 1.26e-24 100
MS.gene35588.t1 MTR_1g028300 32.800 250 141 7 56 282 135 380 1.46e-24 102
MS.gene35588.t1 MTR_4g118340 26.190 294 172 11 33 282 49 341 2.44e-22 95.9
MS.gene35588.t1 MTR_5g009370 30.363 303 168 11 15 281 35 330 2.93e-22 94.7
MS.gene35588.t1 MTR_1g067210 27.532 316 159 10 31 279 36 348 8.80e-22 94.0
MS.gene35588.t1 MTR_7g112490 38.000 200 96 11 106 279 180 377 3.11e-21 92.8
MS.gene35588.t1 MTR_7g112490 38.000 200 96 11 106 279 162 359 3.55e-21 92.4
MS.gene35588.t1 MTR_7g090550 30.153 262 126 10 35 249 41 292 6.71e-21 92.0
MS.gene35588.t1 MTR_1g083690 37.811 201 98 9 106 281 152 350 1.20e-20 90.5
MS.gene35588.t1 MTR_7g100240 27.848 316 158 12 31 279 31 343 2.88e-20 89.7
MS.gene35588.t1 MTR_3g032700 28.772 285 154 10 24 266 29 306 1.46e-19 88.2
MS.gene35588.t1 MTR_3g032660 28.772 285 154 10 24 266 29 306 1.65e-19 88.2
MS.gene35588.t1 MTR_4g120410 36.275 204 103 10 103 281 151 352 1.79e-19 87.4
MS.gene35588.t1 MTR_1g116260 27.070 314 150 11 37 279 47 352 1.94e-19 87.4
MS.gene35588.t1 MTR_1g112840 27.362 307 158 9 37 279 48 353 2.73e-19 87.0
MS.gene35588.t1 MTR_1g110210 29.915 234 138 8 66 279 68 295 5.07e-19 85.5
MS.gene35588.t1 MTR_2g435550 33.210 271 125 14 62 281 88 353 7.84e-19 85.5
MS.gene35588.t1 MTR_7g081020 26.857 350 172 14 6 279 7 348 8.19e-19 85.9
MS.gene35588.t1 MTR_2g435550 33.210 271 125 14 62 281 74 339 8.27e-19 85.5
MS.gene35588.t1 MTR_2g435550 33.871 248 115 12 62 265 88 330 1.74e-18 84.7
MS.gene35588.t1 MTR_7g081020 27.667 300 153 12 6 249 7 298 4.57e-18 82.8
MS.gene35588.t1 MTR_1g019760 28.205 234 142 8 66 279 65 292 9.20e-18 82.8
MS.gene35588.t1 MTR_1g019760 28.205 234 142 8 66 279 65 292 9.60e-18 82.8
MS.gene35588.t1 MTR_8g074930 26.214 309 159 10 37 279 46 351 1.95e-17 81.6
MS.gene35588.t1 MTR_2g020970 26.217 267 153 9 58 282 78 342 3.10e-17 81.6
MS.gene35588.t1 MTR_2g020970 26.217 267 153 9 58 282 78 342 3.12e-17 80.9
MS.gene35588.t1 MTR_7g112430 28.390 236 139 7 66 279 68 295 4.00e-17 81.3
MS.gene35588.t1 MTR_4g123080 38.333 120 59 3 170 279 115 229 4.50e-17 79.3
MS.gene35588.t1 MTR_7g090530 27.682 289 152 13 35 276 40 318 5.00e-17 80.9
MS.gene35588.t1 MTR_7g070510 38.854 157 80 6 126 267 188 343 5.41e-17 80.9
MS.gene35588.t1 MTR_7g021530 38.889 180 90 9 103 265 117 293 5.83e-17 80.1
MS.gene35588.t1 MTR_1g083750 27.660 282 163 10 26 279 27 295 1.05e-16 79.7
MS.gene35588.t1 MTR_7g021530 38.889 180 90 9 103 265 167 343 1.36e-16 79.3
MS.gene35588.t1 MTR_7g021530 38.889 180 90 9 103 265 208 384 1.59e-16 79.3
MS.gene35588.t1 MTR_7g080170 38.650 163 80 7 103 247 75 235 1.65e-16 79.3
MS.gene35588.t1 MTR_7g080170 38.650 163 80 7 103 247 183 343 2.05e-16 79.3
MS.gene35588.t1 MTR_8g017240 38.547 179 84 8 126 281 164 339 2.22e-16 78.6
MS.gene35588.t1 MTR_4g113480 29.084 251 134 9 35 248 47 290 3.95e-16 78.6
MS.gene35588.t1 MTR_5g071550 33.146 178 109 7 9 182 99 270 1.10e-15 75.9
MS.gene35588.t1 MTR_2g090190 36.250 160 82 7 106 247 165 322 1.17e-15 77.0
MS.gene35588.t1 MTR_2g033910 26.923 312 155 12 34 279 44 348 3.42e-15 75.1
MS.gene35588.t1 MTR_4g013295 37.107 159 83 6 125 267 165 322 4.37e-15 74.7
MS.gene35588.t1 MTR_7g029240 31.092 238 138 11 64 279 66 299 6.47e-15 74.7
MS.gene35588.t1 MTR_3g101540 26.923 234 145 8 66 279 66 293 6.53e-15 74.7
MS.gene35588.t1 MTR_3g101540 26.923 234 145 8 66 279 66 293 8.64e-15 74.3
MS.gene35588.t1 MTR_1g016620 30.531 226 116 10 63 248 64 288 5.57e-14 71.6
MS.gene35588.t1 MTR_8g074930 27.426 237 108 8 104 279 6 239 1.01e-13 70.1
MS.gene35588.t1 MTR_1g106855 26.433 314 146 13 37 279 36 335 4.01e-13 69.3
MS.gene35588.t1 MTR_1g083750 31.395 172 99 5 123 279 36 203 9.88e-13 67.8
MS.gene35588.t1 MTR_1g106855 25.781 256 139 9 37 248 36 284 8.58e-12 64.7
MS.gene35588.t1 MTR_3g032590 29.952 207 96 8 93 266 122 312 2.40e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35588.t1 AT1G34750 74.468 282 72 0 1 282 1 282 1.05e-159 446
MS.gene35588.t1 AT1G34750 74.468 282 72 0 1 282 1 282 1.05e-159 446
MS.gene35588.t1 AT1G34750 74.468 282 72 0 1 282 1 282 1.05e-159 446
MS.gene35588.t1 AT1G22280 71.986 282 78 1 1 282 1 281 1.48e-148 417
MS.gene35588.t1 AT1G22280 70.486 288 78 2 1 282 1 287 4.28e-146 411
MS.gene35588.t1 AT1G34750 73.279 247 64 1 1 247 1 245 1.93e-133 377
MS.gene35588.t1 AT1G78200 63.158 285 100 3 1 282 1 283 1.55e-132 377
MS.gene35588.t1 AT1G78200 63.158 285 100 3 1 282 1 283 1.55e-132 377
MS.gene35588.t1 AT1G78200 63.158 285 100 3 1 282 1 283 1.55e-132 377
MS.gene35588.t1 AT4G28400 60.223 269 106 1 14 282 16 283 3.37e-115 333
MS.gene35588.t1 AT4G28400 61.776 259 98 1 24 282 4 261 1.90e-114 330
MS.gene35588.t1 AT3G15260 61.481 270 103 1 14 282 20 289 5.91e-113 327
MS.gene35588.t1 AT3G15260 61.481 270 103 1 14 282 20 289 5.91e-113 327
MS.gene35588.t1 AT1G78200 65.546 238 79 2 48 282 1 238 7.42e-113 325
MS.gene35588.t1 AT1G78200 65.546 238 79 2 48 282 1 238 7.42e-113 325
MS.gene35588.t1 AT2G20630 59.696 263 105 1 21 282 17 279 8.55e-113 327
MS.gene35588.t1 AT2G20630 59.542 262 105 1 21 281 17 278 1.39e-110 321
MS.gene35588.t1 AT1G22280 73.656 186 48 1 1 186 1 185 9.93e-93 273
MS.gene35588.t1 AT4G28400 58.667 225 92 1 14 238 16 239 1.18e-91 272
MS.gene35588.t1 AT2G34740 52.610 249 114 3 35 281 88 334 1.25e-84 257
MS.gene35588.t1 AT5G10740 44.604 278 141 6 10 281 9 279 4.41e-70 220
MS.gene35588.t1 AT5G10740 44.604 278 141 6 10 281 9 279 4.41e-70 220
MS.gene35588.t1 AT4G31750 44.366 284 150 6 1 281 1 279 5.78e-70 218
MS.gene35588.t1 AT4G31750 44.366 284 150 6 1 281 1 279 6.91e-70 218
MS.gene35588.t1 AT4G31750 44.366 284 150 6 1 281 1 279 6.91e-70 218
MS.gene35588.t1 AT2G34740 52.683 205 95 2 35 238 102 305 7.23e-70 219
MS.gene35588.t1 AT2G34740 52.683 205 95 2 35 238 84 287 7.54e-70 218
MS.gene35588.t1 AT5G24940 44.364 275 146 5 10 281 9 279 1.36e-68 219
MS.gene35588.t1 AT5G53140 40.458 262 149 5 24 282 91 348 1.05e-62 203
MS.gene35588.t1 AT5G53140 40.458 262 149 5 24 282 91 348 1.05e-62 203
MS.gene35588.t1 AT1G43900 39.683 252 144 6 33 281 122 368 3.75e-56 185
MS.gene35588.t1 AT2G33700 36.047 258 139 7 44 281 93 344 1.00e-40 145
MS.gene35588.t1 AT3G62260 36.226 265 132 8 48 281 1 259 2.75e-40 142
MS.gene35588.t1 AT1G07160 37.452 259 145 8 36 281 122 376 5.83e-40 143
MS.gene35588.t1 AT3G62260 35.315 286 145 10 28 281 72 349 1.17e-39 142
MS.gene35588.t1 AT3G62260 35.315 286 145 10 28 281 71 348 1.21e-39 142
MS.gene35588.t1 AT2G40180 36.090 266 144 10 35 282 129 386 1.70e-37 137
MS.gene35588.t1 AT2G25620 36.910 233 122 6 66 279 128 354 2.13e-37 136
MS.gene35588.t1 AT2G25620 36.910 233 122 6 66 279 128 354 2.13e-37 136
MS.gene35588.t1 AT2G30020 37.838 259 145 10 35 282 140 393 2.22e-37 136
MS.gene35588.t1 AT3G51470 33.772 228 133 5 66 281 62 283 3.62e-37 134
MS.gene35588.t1 AT3G51470 33.624 229 134 5 65 281 105 327 1.29e-36 134
MS.gene35588.t1 AT3G17250 32.852 277 143 8 41 281 124 393 9.84e-35 130
MS.gene35588.t1 AT1G48040 32.990 291 149 10 26 281 70 349 2.59e-34 128
MS.gene35588.t1 AT2G29380 32.542 295 147 12 32 282 75 361 3.06e-30 117
MS.gene35588.t1 AT2G40860 32.155 283 161 8 20 282 280 551 7.47e-30 118
MS.gene35588.t1 AT2G40860 32.155 283 161 8 20 282 378 649 9.13e-30 118
MS.gene35588.t1 AT4G26080 32.107 299 148 10 35 282 129 423 1.17e-29 116
MS.gene35588.t1 AT1G67820 34.483 203 123 5 48 245 97 294 5.54e-29 114
MS.gene35588.t1 AT1G67820 34.483 203 123 5 48 245 133 330 1.21e-28 114
MS.gene35588.t1 AT5G57050 31.908 304 147 12 35 282 73 372 1.42e-28 112
MS.gene35588.t1 AT5G57050 31.908 304 147 12 35 282 113 412 2.03e-28 113
MS.gene35588.t1 AT2G25070 27.987 318 152 12 33 282 22 330 5.01e-27 108
MS.gene35588.t1 AT2G25070 27.987 318 152 12 33 282 22 330 5.01e-27 108
MS.gene35588.t1 AT5G51760 32.704 318 150 12 25 282 69 382 5.58e-27 108
MS.gene35588.t1 AT5G51760 32.704 318 150 12 25 282 99 412 7.16e-27 108
MS.gene35588.t1 AT1G07430 32.692 260 143 9 15 249 103 355 1.77e-26 107
MS.gene35588.t1 AT3G23360 30.303 231 125 6 56 281 60 259 2.26e-26 104
MS.gene35588.t1 AT4G31860 29.448 326 149 15 26 282 17 330 3.39e-26 105
MS.gene35588.t1 AT4G31860 31.206 282 122 12 26 247 17 286 3.61e-26 104
MS.gene35588.t1 AT5G59220 33.607 244 131 8 30 249 107 343 4.70e-26 106
MS.gene35588.t1 AT2G40860 31.599 269 153 8 20 268 378 635 5.03e-26 107
MS.gene35588.t1 AT1G72770 32.963 270 123 10 66 282 238 502 3.36e-25 104
MS.gene35588.t1 AT1G72770 32.963 270 123 10 66 282 238 502 3.36e-25 104
MS.gene35588.t1 AT1G72770 32.963 270 123 10 66 282 238 502 3.36e-25 104
MS.gene35588.t1 AT1G18030 30.072 276 147 11 44 282 83 349 3.67e-25 103
MS.gene35588.t1 AT1G17550 31.481 270 128 7 66 282 237 502 3.22e-24 102
MS.gene35588.t1 AT1G17550 31.481 270 128 7 66 282 237 502 3.22e-24 102
MS.gene35588.t1 AT3G11410 31.429 245 134 8 34 249 104 343 1.59e-23 99.4
MS.gene35588.t1 AT4G31860 30.996 271 115 12 26 236 17 275 3.47e-23 96.3
MS.gene35588.t1 AT3G16800 42.188 192 84 10 116 282 65 254 1.05e-22 94.7
MS.gene35588.t1 AT3G16800 42.188 192 84 10 116 282 65 254 1.05e-22 94.7
MS.gene35588.t1 AT3G05640 39.706 204 96 10 103 281 148 349 1.12e-22 96.3
MS.gene35588.t1 AT3G05640 39.706 204 96 10 103 281 148 349 1.12e-22 96.3
MS.gene35588.t1 AT3G05640 39.706 204 96 10 103 281 148 349 1.12e-22 96.3
MS.gene35588.t1 AT3G16800 42.188 192 84 10 116 282 160 349 4.34e-22 94.7
MS.gene35588.t1 AT3G16800 42.188 192 84 10 116 282 160 349 4.34e-22 94.7
MS.gene35588.t1 AT3G16800 42.188 192 84 10 116 282 160 349 4.34e-22 94.7
MS.gene35588.t1 AT5G27930 38.614 202 97 9 103 279 153 352 5.45e-22 94.7
MS.gene35588.t1 AT5G27930 38.614 202 97 9 103 279 153 352 5.45e-22 94.7
MS.gene35588.t1 AT2G20050 27.559 254 143 9 66 279 143 395 2.47e-21 94.4
MS.gene35588.t1 AT2G20050 27.559 254 143 9 66 279 143 395 2.47e-21 94.4
MS.gene35588.t1 AT1G68410 30.078 256 148 10 49 279 51 300 4.54e-21 92.4
MS.gene35588.t1 AT1G68410 30.078 256 148 10 49 279 51 300 4.54e-21 92.4
MS.gene35588.t1 AT1G68410 30.078 256 148 10 49 279 51 300 4.54e-21 92.4
MS.gene35588.t1 AT1G68410 30.078 256 148 10 49 279 51 300 4.54e-21 92.4
MS.gene35588.t1 AT5G66080 28.617 311 150 11 37 279 48 354 6.27e-21 91.7
MS.gene35588.t1 AT4G27800 27.987 318 164 11 12 278 42 345 8.06e-21 91.7
MS.gene35588.t1 AT3G51370 28.526 312 148 12 37 279 46 351 1.11e-20 90.9
MS.gene35588.t1 AT3G51370 28.526 312 148 12 37 279 46 351 1.11e-20 90.9
MS.gene35588.t1 AT1G18030 31.718 227 114 9 44 238 83 300 2.23e-20 89.4
MS.gene35588.t1 AT4G38520 27.389 314 153 11 37 281 48 355 2.28e-20 90.5
MS.gene35588.t1 AT4G38520 27.389 314 153 11 37 281 48 355 2.28e-20 90.5
MS.gene35588.t1 AT1G09160 32.051 234 133 9 66 279 68 295 3.28e-20 90.1
MS.gene35588.t1 AT1G09160 32.051 234 133 9 66 279 68 295 3.28e-20 90.1
MS.gene35588.t1 AT4G08260 30.705 241 129 7 48 282 1 209 7.71e-20 85.9
MS.gene35588.t1 AT3G12620 28.025 314 147 11 37 279 50 355 1.27e-18 85.1
MS.gene35588.t1 AT3G12620 28.025 314 147 11 37 279 50 355 1.27e-18 85.1
MS.gene35588.t1 AT1G79630 35.000 200 104 8 106 281 131 328 2.71e-18 84.7
MS.gene35588.t1 AT1G79630 35.000 200 104 8 106 281 131 328 2.71e-18 84.7
MS.gene35588.t1 AT1G79630 35.000 200 104 8 106 281 91 288 2.76e-18 84.3
MS.gene35588.t1 AT1G79630 35.000 200 104 8 106 281 91 288 2.76e-18 84.3
MS.gene35588.t1 AT1G79630 35.000 200 104 8 106 281 91 288 2.76e-18 84.3
MS.gene35588.t1 AT1G79630 35.000 200 104 8 106 281 91 288 2.76e-18 84.3
MS.gene35588.t1 AT3G27140 30.702 228 100 6 61 282 14 189 3.05e-18 82.0
MS.gene35588.t1 AT4G27800 27.632 304 158 11 12 268 42 330 3.37e-18 83.6
MS.gene35588.t1 AT1G47380 27.757 263 155 11 37 279 44 291 3.59e-18 84.3
MS.gene35588.t1 AT1G79630 35.000 200 104 8 106 281 201 398 4.24e-18 84.3
MS.gene35588.t1 AT1G79630 35.000 200 104 8 106 281 197 394 4.67e-18 84.3
MS.gene35588.t1 AT5G06750 29.181 281 144 10 37 271 57 328 6.41e-18 83.2
MS.gene35588.t1 AT5G06750 29.181 281 144 10 37 271 57 328 6.41e-18 83.2
MS.gene35588.t1 AT3G06270 24.315 292 174 10 37 282 53 343 7.53e-18 82.8
MS.gene35588.t1 AT3G55050 27.097 310 155 10 37 279 51 356 9.45e-18 82.8
MS.gene35588.t1 AT3G55050 27.097 310 155 10 37 279 51 356 9.45e-18 82.8
MS.gene35588.t1 AT5G02760 29.231 260 129 10 37 248 39 291 1.12e-17 82.4
MS.gene35588.t1 AT4G27800 27.491 291 150 10 12 255 42 318 3.07e-17 80.9
MS.gene35588.t1 AT1G16220 34.000 200 106 8 106 281 178 375 5.89e-17 80.9
MS.gene35588.t1 AT5G01700 37.580 157 82 6 126 267 112 267 1.65e-16 78.6
MS.gene35588.t1 AT4G03415 35.465 172 90 8 94 248 165 332 1.84e-16 79.3
MS.gene35588.t1 AT4G03415 35.465 172 90 8 94 248 165 332 1.84e-16 79.3
MS.gene35588.t1 AT4G03415 35.465 172 90 8 94 248 165 332 1.84e-16 79.3
MS.gene35588.t1 AT5G01700 37.580 157 82 6 126 267 161 316 4.07e-16 78.2
MS.gene35588.t1 AT5G66080 29.412 238 102 8 104 279 17 250 4.30e-16 77.0
MS.gene35588.t1 AT3G17090 26.282 312 147 14 37 279 59 356 1.18e-15 76.6
MS.gene35588.t1 AT3G51370 28.992 238 103 8 104 279 33 266 1.89e-15 75.1
MS.gene35588.t1 AT3G02750 36.066 183 97 7 103 267 192 372 2.44e-15 76.3
MS.gene35588.t1 AT3G02750 36.066 183 97 7 103 267 192 372 2.44e-15 76.3
MS.gene35588.t1 AT4G32950 29.804 255 138 12 62 281 68 316 7.55e-15 73.9
MS.gene35588.t1 AT1G03590 33.898 177 89 8 89 247 155 321 1.29e-14 73.9
MS.gene35588.t1 AT3G17090 26.820 261 128 11 37 248 59 305 2.93e-14 72.0
MS.gene35588.t1 AT5G36250 34.158 202 109 9 103 281 183 383 6.02e-14 72.0
MS.gene35588.t1 AT5G59220 31.980 197 103 8 30 202 107 296 6.91e-14 70.9
MS.gene35588.t1 AT5G26010 30.180 222 103 10 66 247 73 282 1.81e-13 70.1
MS.gene35588.t1 AT2G05050 39.394 99 54 2 190 282 92 190 2.42e-13 67.8
MS.gene35588.t1 AT3G63340 25.188 266 130 9 76 282 191 446 8.32e-13 68.6
MS.gene35588.t1 AT3G63340 25.843 267 127 10 76 282 191 446 9.66e-13 68.6
MS.gene35588.t1 AT3G63340 28.241 216 94 8 126 282 233 446 9.78e-13 68.6
MS.gene35588.t1 AT3G63340 28.241 216 94 8 126 282 233 446 9.78e-13 68.6
MS.gene35588.t1 AT3G63340 28.241 216 94 8 126 282 233 446 9.78e-13 68.6
MS.gene35588.t1 AT3G63340 28.241 216 94 8 126 282 233 446 9.78e-13 68.6
MS.gene35588.t1 AT3G63340 27.982 218 96 8 124 282 231 446 1.03e-12 68.6
MS.gene35588.t1 AT3G63340 27.982 218 96 8 124 282 231 446 1.15e-12 68.6
MS.gene35588.t1 AT3G63340 27.982 218 96 8 124 282 231 446 1.15e-12 68.6
MS.gene35588.t1 AT3G63340 27.982 218 96 8 124 282 231 446 1.23e-12 68.6
MS.gene35588.t1 AT5G27930 39.073 151 72 8 103 235 153 301 3.75e-12 65.9
MS.gene35588.t1 AT3G63340 32.624 141 78 5 158 282 340 479 1.23e-11 65.5
MS.gene35588.t1 AT5G06750 32.044 181 86 5 126 271 68 246 1.98e-11 63.9
MS.gene35588.t1 AT5G57050 30.653 199 104 10 35 203 113 307 2.55e-11 63.5
MS.gene35588.t1 AT5G36250 31.944 216 109 10 103 281 183 397 9.47e-11 62.4

Find 56 sgRNAs with CRISPR-Local

Find 121 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTATCACATAGTTCTGATTT+AGG 0.128278 3.3:+64289564 MS.gene35588:CDS
TAATGTCTTAGGAGGGATTT+TGG 0.177043 3.3:+64289487 MS.gene35588:intron
TCCTTGCAAGTGATGGAATT+TGG 0.220725 3.3:+64290242 MS.gene35588:CDS
TATGGTTTCAGCCTGGTAAA+AGG 0.256408 3.3:+64289222 MS.gene35588:CDS
TATCACATAGTTCTGATTTA+GGG 0.269536 3.3:+64289565 MS.gene35588:CDS
AAACAAATGTTTCTGTAAAT+AGG 0.285064 3.3:-64289358 None:intergenic
TGCCAAGTTTGTGCAGTTAC+AGG 0.290788 3.3:+64289278 MS.gene35588:CDS
ATGCTGCCTCGTTCTGTGTT+AGG 0.291390 3.3:-64289717 None:intergenic
TATGAAGGTTCAATAAAGTA+TGG 0.295896 3.3:+64289204 MS.gene35588:CDS
GGTGATGTGCCAAGAGTAAA+TGG 0.312120 3.3:+64290112 MS.gene35588:intron
ATATCAGTTGTTTGTACGTC+CGG 0.346525 3.3:-64290196 None:intergenic
GCAGTTACAGGATAAAGAAT+TGG 0.348814 3.3:+64289290 MS.gene35588:CDS
CGAGCTGTTCTTTCAAGAAA+AGG 0.380614 3.3:+64289663 MS.gene35588:CDS
GGTTTATTTGCTATCTATGA+TGG 0.400323 3.3:+64289312 MS.gene35588:CDS
CTGGCTGTTTCTCGCGCATT+CGG 0.403068 3.3:+64290139 MS.gene35588:CDS
CAGTTACAGGATAAAGAATT+GGG 0.412042 3.3:+64289291 MS.gene35588:CDS
ATTCTTCCCCTTACCAGTGC+TGG 0.431903 3.3:-64289181 None:intergenic
ATCCTGTAACTGCACAAACT+TGG 0.441965 3.3:-64289280 None:intergenic
GCCAGTTGTCCATTTACTCT+TGG 0.452548 3.3:-64290121 None:intergenic
TGATCGATGGAAGAAGACTA+TGG 0.456175 3.3:+64289619 MS.gene35588:CDS
TCCTTCATCCAGCACTGGTA+AGG 0.460024 3.3:+64289173 MS.gene35588:CDS
TTTCTCGCGCATTCGGAGAC+AGG 0.464479 3.3:+64290146 MS.gene35588:CDS
AGCATATGAGAGCACAGATC+AGG 0.488510 3.3:+64289536 MS.gene35588:CDS
ATGGTTTCAGCCTGGTAAAA+GGG 0.490236 3.3:+64289223 MS.gene35588:CDS
GAGCTGTTCTTTCAAGAAAA+GGG 0.498758 3.3:+64289664 MS.gene35588:CDS
GCCAAGAGTAAATGGACAAC+TGG 0.502390 3.3:+64290120 MS.gene35588:CDS
TCCAAATTCCATCACTTGCA+AGG 0.505997 3.3:-64290243 None:intergenic
TATCAGTTGTTTGTACGTCC+GGG 0.509050 3.3:-64290195 None:intergenic
AGGCGGGTACACGGTCTCCT+AGG 0.512596 3.3:-64289338 None:intergenic
GTCACATTTGCGATCGGACC+CGG 0.512761 3.3:+64290177 MS.gene35588:CDS
CCTTCATCCAGCACTGGTAA+GGG 0.519737 3.3:+64289174 MS.gene35588:CDS
CCCTTACCAGTGCTGGATGA+AGG 0.519813 3.3:-64289174 None:intergenic
ATGCTAATCCTTGCAAGTGA+TGG 0.527602 3.3:+64290235 MS.gene35588:CDS
AGACTATGGATAGCTAATGT+TGG 0.531821 3.3:+64289633 MS.gene35588:CDS
CATAGTTCTGATTTAGGGCA+TGG 0.532974 3.3:+64289570 MS.gene35588:CDS
GCAACATGATAATCCTCCAT+TGG 0.541831 3.3:-64289258 None:intergenic
GTATAAAGTACCTGGCAAGT+TGG 0.567767 3.3:-64289763 None:intergenic
AAATGTTTCTGTAAATAGGC+GGG 0.568152 3.3:-64289354 None:intergenic
AATAAAGTATGGTTTCAGCC+TGG 0.582834 3.3:+64289215 MS.gene35588:CDS
GGTAAGGGGAAGAATTATGA+AGG 0.584168 3.3:+64289189 MS.gene35588:CDS
TCGCGTCCTTCATCCAGCAC+TGG 0.584590 3.3:+64289168 MS.gene35588:CDS
GCTATCTATGATGGTCACCT+AGG 0.596085 3.3:+64289321 MS.gene35588:CDS
CAAATGTTTCTGTAAATAGG+CGG 0.596245 3.3:-64289355 None:intergenic
AATGGCTAATCAAGAAGCAG+TGG 0.600653 3.3:+64290357 MS.gene35588:CDS
AGGGAGAGCTAATCATCCAA+TGG 0.605811 3.3:+64289242 MS.gene35588:CDS
TCTGTAAATAGGCGGGTACA+CGG 0.611832 3.3:-64289347 None:intergenic
CTTCATCCAGCACTGGTAAG+GGG 0.614480 3.3:+64289175 MS.gene35588:CDS
CGAGGCAGCATTGAGACTAG+AGG 0.620933 3.3:+64289729 MS.gene35588:CDS
AGATGATATATCTTGTGTTG+TGG 0.625754 3.3:+64290456 MS.gene35588:CDS
TCTCAAGTCACATTTGCGAT+CGG 0.627665 3.3:+64290171 MS.gene35588:CDS
GGCAGCATTGAGACTAGAGG+TGG 0.629832 3.3:+64289732 MS.gene35588:CDS
TGCAAGTGATGGAATTTGGA+AGG 0.633405 3.3:+64290246 MS.gene35588:CDS
CACGAACCTAACACAGAACG+AGG 0.638936 3.3:+64289711 MS.gene35588:CDS
AGTTCTGATTTAGGGCATGG+TGG 0.647148 3.3:+64289573 MS.gene35588:CDS
GTAACTGCGATATTGATCGA+TGG 0.653968 3.3:+64289606 MS.gene35588:CDS
GAGAGCTAATCATCCAATGG+AGG 0.673610 3.3:+64289245 MS.gene35588:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTAACTTATAATTTATCT+TGG + chr3.3:64288588-64288607 MS.gene35588:intron 10.0%
!! AATATAGTAATTCTCTTTAT+AGG - chr3.3:64288547-64288566 None:intergenic 15.0%
!!! ATTTTATTTGATCTTTTGTT+AGG + chr3.3:64288965-64288984 MS.gene35588:intron 15.0%
!! ACTCAATAAACAATAGATAA+TGG - chr3.3:64288419-64288438 None:intergenic 20.0%
!! ATAGGTTAAAAAAAAAAAGC+TGG - chr3.3:64288784-64288803 None:intergenic 20.0%
!! ATATGATAAGTGTTTATGTT+AGG + chr3.3:64289010-64289029 MS.gene35588:intron 20.0%
!! ATTAAACTGTTTACTCAAAT+AGG + chr3.3:64289041-64289060 MS.gene35588:intron 20.0%
!! TGTACTATTAGTATTAAACT+TGG + chr3.3:64288641-64288660 MS.gene35588:intron 20.0%
!! TTAAACTGTTTACTCAAATA+GGG + chr3.3:64289042-64289061 MS.gene35588:intron 20.0%
!!! AAACAAATGTTTCTGTAAAT+AGG - chr3.3:64289361-64289380 None:intergenic 20.0%
!!! ACTATTTTTATAAACTATCC+TGG - chr3.3:64288921-64288940 None:intergenic 20.0%
!!! ATTTGTTTAGCAACATTTTA+AGG + chr3.3:64289373-64289392 MS.gene35588:CDS 20.0%
!!! TTTATATTCTCACTTGTTAT+TGG + chr3.3:64288456-64288475 MS.gene35588:intron 20.0%
!!! TTTGTTTAGCAACATTTTAA+GGG + chr3.3:64289374-64289393 MS.gene35588:CDS 20.0%
! AAATCATCATACAGATGATA+TGG + chr3.3:64288694-64288713 MS.gene35588:intron 25.0%
! AATCATCATACAGATGATAT+GGG + chr3.3:64288695-64288714 MS.gene35588:intron 25.0%
! AGTACAAAATGTTGTCTATT+AGG + chr3.3:64289983-64290002 MS.gene35588:intron 25.0%
! GTACAAAATGTTGTCTATTA+GGG + chr3.3:64289984-64290003 MS.gene35588:intron 25.0%
! TAATAGTACATCAAAGTTCT+AGG - chr3.3:64288631-64288650 None:intergenic 25.0%
! TATGAAGGTTCAATAAAGTA+TGG + chr3.3:64289204-64289223 MS.gene35588:CDS 25.0%
! TTGTACTAAATAGTATATCG+CGG - chr3.3:64289970-64289989 None:intergenic 25.0%
!! AATTAATGGTATAAAGTACC+TGG - chr3.3:64289774-64289793 None:intergenic 25.0%
!! ATTGATTTAATGTCTTAGGA+GGG + chr3.3:64289480-64289499 MS.gene35588:intron 25.0%
!! CAGAATTCAGGTTTAATTAA+TGG - chr3.3:64289788-64289807 None:intergenic 25.0%
!! TTTTAAATCTTCATACTCTC+AGG + chr3.3:64288339-64288358 MS.gene35588:CDS 25.0%
!!! AATATTCCTTCCAGTTTTAA+GGG - chr3.3:64289111-64289130 None:intergenic 25.0%
!!! AATTTGTTAAGTAATGTTCG+CGG - chr3.3:64290073-64290092 None:intergenic 25.0%
!!! CAAATTCTATTTCTAGTTCT+AGG + chr3.3:64288512-64288531 MS.gene35588:intron 25.0%
!!! GCTTATTGATTTAATGTCTT+AGG + chr3.3:64289476-64289495 MS.gene35588:intron 25.0%
!!! TATCACATAGTTCTGATTTA+GGG + chr3.3:64289565-64289584 MS.gene35588:CDS 25.0%
!!! TATTGATTTAATGTCTTAGG+AGG + chr3.3:64289479-64289498 MS.gene35588:intron 25.0%
AAATACAAACTCCACATCTT+AGG - chr3.3:64288759-64288778 None:intergenic 30.0%
AGATGATATATCTTGTGTTG+TGG + chr3.3:64290456-64290475 MS.gene35588:CDS 30.0%
ATCAATAAGCACAATAGTAG+AGG - chr3.3:64289466-64289485 None:intergenic 30.0%
CAGTTACAGGATAAAGAATT+GGG + chr3.3:64289291-64289310 MS.gene35588:CDS 30.0%
CTCGGTATATAAGTTCAAAT+AGG - chr3.3:64288802-64288821 None:intergenic 30.0%
TCATTTGCATGTGTTAAACT+AGG + chr3.3:64290333-64290352 MS.gene35588:intron 30.0%
TCTAAGTTCTGCTACATTAT+AGG - chr3.3:64289932-64289951 None:intergenic 30.0%
! AAATGTTTCTGTAAATAGGC+GGG - chr3.3:64289357-64289376 None:intergenic 30.0%
! CAAATGTTTCTGTAAATAGG+CGG - chr3.3:64289358-64289377 None:intergenic 30.0%
! GAATATTCCTTCCAGTTTTA+AGG - chr3.3:64289112-64289131 None:intergenic 30.0%
! TTAATGTTGTTGTTGATGCT+AGG + chr3.3:64290091-64290110 MS.gene35588:intron 30.0%
!! AGTTCTAGGTAGGAAAATAA+TGG - chr3.3:64288617-64288636 None:intergenic 30.0%
!! ATTCTCACTTGTTATTGGAA+TGG + chr3.3:64288461-64288480 MS.gene35588:intron 30.0%
!! CTATCACATAGTTCTGATTT+AGG + chr3.3:64289564-64289583 MS.gene35588:CDS 30.0%
!! CTTATTTCTATAAGCTTTCC+AGG + chr3.3:64288900-64288919 MS.gene35588:intron 30.0%
!! CTTGTTATTGGAATGGAAAT+TGG + chr3.3:64288468-64288487 MS.gene35588:intron 30.0%
!! GGTTTATTTGCTATCTATGA+TGG + chr3.3:64289312-64289331 MS.gene35588:CDS 30.0%
!!! CTGTTTTGATAAGCATTTAG+AGG + chr3.3:64288725-64288744 MS.gene35588:intron 30.0%
!!! CTTTTGAGATAGAAAGAGTA+GGG - chr3.3:64289518-64289537 None:intergenic 30.0%
AATAAAGTATGGTTTCAGCC+TGG + chr3.3:64289215-64289234 MS.gene35588:CDS 35.0%
AGACTATGGATAGCTAATGT+TGG + chr3.3:64289633-64289652 MS.gene35588:CDS 35.0%
ATATCAGTTGTTTGTACGTC+CGG - chr3.3:64290199-64290218 None:intergenic 35.0%
CATCATTAGGAACAGAATTC+AGG - chr3.3:64289800-64289819 None:intergenic 35.0%
GAGCTGTTCTTTCAAGAAAA+GGG + chr3.3:64289664-64289683 MS.gene35588:CDS 35.0%
GCAGTTACAGGATAAAGAAT+TGG + chr3.3:64289290-64289309 MS.gene35588:CDS 35.0%
GCATGTGTTAAACTAGGTAA+TGG + chr3.3:64290339-64290358 MS.gene35588:intron 35.0%
GTGTCAATTGCTTCATCATT+AGG - chr3.3:64289813-64289832 None:intergenic 35.0%
TGCTAACTTTAGCATGCATT+GGG - chr3.3:64289838-64289857 None:intergenic 35.0%
TTGTCTATTAGGGACTATAG+AGG + chr3.3:64289994-64290013 MS.gene35588:intron 35.0%
TTGTTAAAATGTAGCTCGAG+CGG + chr3.3:64289889-64289908 MS.gene35588:intron 35.0%
! AACATCACATGTGCTTTTGT+CGG - chr3.3:64288827-64288846 None:intergenic 35.0%
! AAGCACATGTGATGTTGTTT+AGG + chr3.3:64288831-64288850 MS.gene35588:intron 35.0%
! AATGTCTTAGGAGGGATTTT+GGG + chr3.3:64289488-64289507 MS.gene35588:intron 35.0%
! TAATGTCTTAGGAGGGATTT+TGG + chr3.3:64289487-64289506 MS.gene35588:intron 35.0%
!! AGTACATCAAAGTTCTAGGT+AGG - chr3.3:64288627-64288646 None:intergenic 35.0%
!! GTTTAGCAACATTTTAAGGG+AGG + chr3.3:64289377-64289396 MS.gene35588:CDS 35.0%
!!! AGTTGTTTTGCTGCTTTATG+TGG - chr3.3:64290406-64290425 None:intergenic 35.0%
!!! GCTTTTGAGATAGAAAGAGT+AGG - chr3.3:64289519-64289538 None:intergenic 35.0%
AATGGCTAATCAAGAAGCAG+TGG + chr3.3:64290357-64290376 MS.gene35588:CDS 40.0%
ATCCTGTAACTGCACAAACT+TGG - chr3.3:64289283-64289302 None:intergenic 40.0%
ATGCTAATCCTTGCAAGTGA+TGG + chr3.3:64290235-64290254 MS.gene35588:CDS 40.0%
ATGGTTTCAGCCTGGTAAAA+GGG + chr3.3:64289223-64289242 MS.gene35588:CDS 40.0%
CGAGCTGTTCTTTCAAGAAA+AGG + chr3.3:64289663-64289682 MS.gene35588:CDS 40.0%
CTTTGCATGTCCCTTAAAAC+TGG + chr3.3:64289098-64289117 MS.gene35588:intron 40.0%
GCAACATGATAATCCTCCAT+TGG - chr3.3:64289261-64289280 None:intergenic 40.0%
GGTAAGGGGAAGAATTATGA+AGG + chr3.3:64289189-64289208 MS.gene35588:CDS 40.0%
GTAACTGCGATATTGATCGA+TGG + chr3.3:64289606-64289625 MS.gene35588:CDS 40.0%
GTGCTAACTTTAGCATGCAT+TGG - chr3.3:64289839-64289858 None:intergenic 40.0%
GTTATAGTACTGTTGCGTAG+TGG + chr3.3:64290018-64290037 MS.gene35588:intron 40.0%
TAAGTAATGTTCGCGGATCA+CGG - chr3.3:64290066-64290085 None:intergenic 40.0%
TATCAGTTGTTTGTACGTCC+GGG - chr3.3:64290198-64290217 None:intergenic 40.0%
TATGGTTTCAGCCTGGTAAA+AGG + chr3.3:64289222-64289241 MS.gene35588:CDS 40.0%
TCCAAATTCCATCACTTGCA+AGG - chr3.3:64290246-64290265 None:intergenic 40.0%
TCTCAAGTCACATTTGCGAT+CGG + chr3.3:64290171-64290190 MS.gene35588:CDS 40.0%
TGATCGATGGAAGAAGACTA+TGG + chr3.3:64289619-64289638 MS.gene35588:CDS 40.0%
! AGGACAATTAGCCTAAGATG+TGG + chr3.3:64288745-64288764 MS.gene35588:intron 40.0%
! GGAAATTGGCACAGATTTTC+AGG + chr3.3:64288482-64288501 MS.gene35588:intron 40.0%
! GTATAAAGTACCTGGCAAGT+TGG - chr3.3:64289766-64289785 None:intergenic 40.0%
! TCCTTGCAAGTGATGGAATT+TGG + chr3.3:64290242-64290261 MS.gene35588:CDS 40.0%
! TGCAAGTGATGGAATTTGGA+AGG + chr3.3:64290246-64290265 MS.gene35588:CDS 40.0%
!! CATAGTTCTGATTTAGGGCA+TGG + chr3.3:64289570-64289589 MS.gene35588:CDS 40.0%
!!! CAGTTTTAAGGGACATGCAA+AGG - chr3.3:64289100-64289119 None:intergenic 40.0%
AGGGAGAGCTAATCATCCAA+TGG + chr3.3:64289242-64289261 MS.gene35588:CDS 45.0%
GAGAGCTAATCATCCAATGG+AGG + chr3.3:64289245-64289264 MS.gene35588:CDS 45.0%
GCATGTCCCTTAAAACTGGA+AGG + chr3.3:64289102-64289121 MS.gene35588:intron 45.0%
GCCAAGAGTAAATGGACAAC+TGG + chr3.3:64290120-64290139 MS.gene35588:CDS 45.0%
GCCAGTTGTCCATTTACTCT+TGG - chr3.3:64290124-64290143 None:intergenic 45.0%
GCTATCTATGATGGTCACCT+AGG + chr3.3:64289321-64289340 MS.gene35588:CDS 45.0%
GGTGATGTGCCAAGAGTAAA+TGG + chr3.3:64290112-64290131 MS.gene35588:intron 45.0%
TCTGTAAATAGGCGGGTACA+CGG - chr3.3:64289350-64289369 None:intergenic 45.0%
TGCCAAGTTTGTGCAGTTAC+AGG + chr3.3:64289278-64289297 MS.gene35588:CDS 45.0%
! AGCATATGAGAGCACAGATC+AGG + chr3.3:64289536-64289555 MS.gene35588:CDS 45.0%
! AGTTCTGATTTAGGGCATGG+TGG + chr3.3:64289573-64289592 MS.gene35588:CDS 45.0%
! CATGTGCTTTTGTCGGTACT+CGG - chr3.3:64288820-64288839 None:intergenic 45.0%
!! GATTAGCTCTCCCTTTTACC+AGG - chr3.3:64289236-64289255 None:intergenic 45.0%
ATGCTGCCTCGTTCTGTGTT+AGG - chr3.3:64289720-64289739 None:intergenic 50.0%
ATTCTTCCCCTTACCAGTGC+TGG - chr3.3:64289184-64289203 None:intergenic 50.0%
CACGAACCTAACACAGAACG+AGG + chr3.3:64289711-64289730 MS.gene35588:CDS 50.0%
!! CCTTCATCCAGCACTGGTAA+GGG + chr3.3:64289174-64289193 MS.gene35588:CDS 50.0%
!! CTTCATCCAGCACTGGTAAG+GGG + chr3.3:64289175-64289194 MS.gene35588:CDS 50.0%
!! GGTTTTGTCTCCAACTTGCC+AGG + chr3.3:64289753-64289772 MS.gene35588:CDS 50.0%
!! TCCTTCATCCAGCACTGGTA+AGG + chr3.3:64289173-64289192 MS.gene35588:CDS 50.0%
GTCACATTTGCGATCGGACC+CGG + chr3.3:64290177-64290196 MS.gene35588:CDS 55.0%
TTTCTCGCGCATTCGGAGAC+AGG + chr3.3:64290146-64290165 MS.gene35588:CDS 55.0%
! CCCTTACCAGTGCTGGATGA+AGG - chr3.3:64289177-64289196 None:intergenic 55.0%
! CGAGGCAGCATTGAGACTAG+AGG + chr3.3:64289729-64289748 MS.gene35588:CDS 55.0%
! GGCAGCATTGAGACTAGAGG+TGG + chr3.3:64289732-64289751 MS.gene35588:CDS 55.0%
!! CTGGCTGTTTCTCGCGCATT+CGG + chr3.3:64290139-64290158 MS.gene35588:CDS 55.0%
TCGCGTCCTTCATCCAGCAC+TGG + chr3.3:64289168-64289187 MS.gene35588:CDS 60.0%
AGGCGGGTACACGGTCTCCT+AGG - chr3.3:64289341-64289360 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 64288322 64290492 64288322 ID=MS.gene35588
chr3.3 mRNA 64288322 64290492 64288322 ID=MS.gene35588.t1;Parent=MS.gene35588
chr3.3 exon 64288322 64288360 64288322 ID=MS.gene35588.t1.exon1;Parent=MS.gene35588.t1
chr3.3 CDS 64288322 64288360 64288322 ID=cds.MS.gene35588.t1;Parent=MS.gene35588.t1
chr3.3 exon 64289159 64289398 64289159 ID=MS.gene35588.t1.exon2;Parent=MS.gene35588.t1
chr3.3 CDS 64289159 64289398 64289159 ID=cds.MS.gene35588.t1;Parent=MS.gene35588.t1
chr3.3 exon 64289498 64289774 64289498 ID=MS.gene35588.t1.exon3;Parent=MS.gene35588.t1
chr3.3 CDS 64289498 64289774 64289498 ID=cds.MS.gene35588.t1;Parent=MS.gene35588.t1
chr3.3 exon 64290113 64290267 64290113 ID=MS.gene35588.t1.exon4;Parent=MS.gene35588.t1
chr3.3 CDS 64290113 64290267 64290113 ID=cds.MS.gene35588.t1;Parent=MS.gene35588.t1
chr3.3 exon 64290355 64290492 64290355 ID=MS.gene35588.t1.exon5;Parent=MS.gene35588.t1
chr3.3 CDS 64290355 64290492 64290355 ID=cds.MS.gene35588.t1;Parent=MS.gene35588.t1
Gene Sequence

>MS.gene35588

ATGGATAGGCTATGCTGTTTTAAATCTTCATACTCTCAGGTAATAATGCAATTTTTCTGTTAGCTATATTTTTTTATGTGATTCTTTGCATGAACCATTATCTATTGTTTATTGAGTTTGATGAAAAACATGTGTTTATATTCTCACTTGTTATTGGAATGGAAATTGGCACAGATTTTCAGGAAAAAGTCAAATTCTATTTCTAGTTCTAGGATTCATATTCCTATAAAGAGAATTACTATATTTGAGTTTAACTAAATCATCAATATTAACTTATAATTTATCTTGGACTCCATTATTTTCCTACCTAGAACTTTGATGTACTATTAGTATTAAACTTGGTTAGTAATTTAACTAATTTTATTTGTTACAAAATCATCATACAGATGATATGGGAAAGAAACTGTTTTGATAAGCATTTAGAGGACAATTAGCCTAAGATGTGGAGTTTGTATTTTTCCAGCTTTTTTTTTTTAACCTATTTGAACTTATATACCGAGTACCGACAAAAGCACATGTGATGTTGTTTAGGAAAGCTTATAGAAACAACTTATGACATGTTCATATGCTGTTTTCATCTTATTTCTATAAGCTTTCCAGGATAGTTTATAAAAATAGTTTATAGCTTATACAGAAAAAAATGATTTTATTTGATCTTTTGTTAGGAATAGCTTATACATAAGCACTTATATGATAAGTGTTTATGTTAGGAGTGCTTAATTAAACTGTTTACTCAAATAGGGTCTTTGTTCTGAAATCAAATACTACTACTTTTCCTTTGCATGTCCCTTAAAACTGGAAGGAATATTCGAATTTTCTGTTTTGATTGCTTTACAGCTTGTAGCGTCGCGTCCTTCATCCAGCACTGGTAAGGGGAAGAATTATGAAGGTTCAATAAAGTATGGTTTCAGCCTGGTAAAAGGGAGAGCTAATCATCCAATGGAGGATTATCATGTTGCCAAGTTTGTGCAGTTACAGGATAAAGAATTGGGTTTATTTGCTATCTATGATGGTCACCTAGGAGACCGTGTACCCGCCTATTTACAGAAACATTTGTTTAGCAACATTTTAAGGGAGGTTAGAAATCATTATATATCTTTTATGCTAGTTTGATCAAAATTCACATTAGAAAAGTTATACTCCTCTACTATTGTGCTTATTGATTTAATGTCTTAGGAGGGATTTTGGGATGACCCTACTCTTTCTATCTCAAAAGCATATGAGAGCACAGATCAGGCTATTCTATCACATAGTTCTGATTTAGGGCATGGTGGATCAACAGCTGTAACTGCGATATTGATCGATGGAAGAAGACTATGGATAGCTAATGTTGGAGACTCGCGAGCTGTTCTTTCAAGAAAAGGGCAAGCAGTACAAATGACTATCGATCACGAACCTAACACAGAACGAGGCAGCATTGAGACTAGAGGTGGTTTTGTCTCCAACTTGCCAGGTACTTTATACCATTAATTAAACCTGAATTCTGTTCCTAATGATGAAGCAATTGACACATCCCAATGCATGCTAAAGTTAGCACTGTGTAGAATAGAGATAGTTGACATCAGTGTTGTTAAAATGTAGCTCGAGCGGCACTATAGAGCTATAAGCCTATAATGTAGCAGAACTTAGACAAACTGCTATTGTTCCGCGATATACTATTTAGTACAAAATGTTGTCTATTAGGGACTATAGAGGCGTTATAGTACTGTTGCGTAGTGGAATTTGAGCAAATTGTTGTTTTCCGTGATCCGCGAACATTACTTAACAAATTAATGTTGTTGTTGATGCTAGGTGATGTGCCAAGAGTAAATGGACAACTGGCTGTTTCTCGCGCATTCGGAGACAGGAGTCTCAAGTCACATTTGCGATCGGACCCGGACGTACAAACAACTGATATAGATGTTGATATTGAAATGCTAATCCTTGCAAGTGATGGAATTTGGAAGGTGAAATAGTTATTGTTGATTTCTTGACTCTTGCTTTTAATGCTCAATATTATTAAAAATAAAAATCATTTGCATGTGTTAAACTAGGTAATGGCTAATCAAGAAGCAGTGGATATTGCTAAAAGAATGAAAGATCCACATAAAGCAGCAAAACAACTAGCAGCTGAAGCAATAAAAAGAAACAGTAAAGATGATATATCTTGTGTTGTGGTTAAATTCAGATGA
Protein sequence

>MS.gene35588.t1

MDRLCCFKSSYSQLVASRPSSSTGKGKNYEGSIKYGFSLVKGRANHPMEDYHVAKFVQLQDKELGLFAIYDGHLGDRVPAYLQKHLFSNILREEGFWDDPTLSISKAYESTDQAILSHSSDLGHGGSTAVTAILIDGRRLWIANVGDSRAVLSRKGQAVQMTIDHEPNTERGSIETRGGFVSNLPGDVPRVNGQLAVSRAFGDRSLKSHLRSDPDVQTTDIDVDIEMLILASDGIWKVMANQEAVDIAKRMKDPHKAAKQLAAEAIKRNSKDDISCVVVKFR