Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98314.t1 | XP_013460907.1 | 99.6 | 235 | 1 | 0 | 1 | 235 | 48 | 282 | 4.40E-128 | 467.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98314.t1 | Q9S9Z7 | 77.0 | 235 | 54 | 0 | 1 | 235 | 48 | 282 | 7.9e-102 | 371.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98314.t1 | A0A072UZT6 | 99.6 | 235 | 1 | 0 | 1 | 235 | 48 | 282 | 3.2e-128 | 467.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene32718 | MS.gene98314 | PPI |
| MS.gene016115 | MS.gene98314 | PPI |
| MS.gene051508 | MS.gene98314 | PPI |
| MS.gene014927 | MS.gene98314 | PPI |
| MS.gene058460 | MS.gene98314 | PPI |
| MS.gene80167 | MS.gene98314 | PPI |
| MS.gene33093 | MS.gene98314 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98314.t1 | MTR_3g074610 | 99.574 | 235 | 1 | 0 | 1 | 235 | 48 | 282 | 8.97e-175 | 481 |
| MS.gene98314.t1 | MTR_5g063940 | 82.979 | 235 | 40 | 0 | 1 | 235 | 1 | 235 | 2.72e-147 | 410 |
| MS.gene98314.t1 | MTR_5g063940 | 82.979 | 235 | 40 | 0 | 1 | 235 | 48 | 282 | 4.56e-147 | 411 |
| MS.gene98314.t1 | MTR_4g094208 | 78.723 | 235 | 50 | 0 | 1 | 235 | 43 | 277 | 1.78e-141 | 397 |
| MS.gene98314.t1 | MTR_2g008850 | 77.872 | 235 | 52 | 0 | 1 | 235 | 1 | 235 | 4.07e-137 | 384 |
| MS.gene98314.t1 | MTR_2g008850 | 77.872 | 235 | 52 | 0 | 1 | 235 | 47 | 281 | 1.96e-136 | 384 |
| MS.gene98314.t1 | MTR_2g078760 | 61.702 | 235 | 90 | 0 | 1 | 235 | 20 | 254 | 5.27e-104 | 301 |
| MS.gene98314.t1 | MTR_2g078760 | 61.702 | 235 | 90 | 0 | 1 | 235 | 99 | 333 | 4.98e-103 | 302 |
| MS.gene98314.t1 | MTR_8g463130 | 60.684 | 234 | 92 | 0 | 1 | 234 | 20 | 253 | 1.76e-100 | 292 |
| MS.gene98314.t1 | MTR_8g463130 | 60.684 | 234 | 92 | 0 | 1 | 234 | 48 | 281 | 5.19e-100 | 292 |
| MS.gene98314.t1 | MTR_2g078760 | 63.351 | 191 | 70 | 0 | 1 | 191 | 99 | 289 | 3.54e-85 | 255 |
| MS.gene98314.t1 | MTR_4g094542 | 53.846 | 234 | 107 | 1 | 1 | 234 | 132 | 364 | 1.01e-83 | 254 |
| MS.gene98314.t1 | MTR_4g094208 | 79.856 | 139 | 28 | 0 | 1 | 139 | 43 | 181 | 1.28e-80 | 241 |
| MS.gene98314.t1 | MTR_1g014640 | 45.570 | 237 | 123 | 4 | 1 | 234 | 90 | 323 | 2.26e-63 | 201 |
| MS.gene98314.t1 | MTR_1g013400 | 45.570 | 237 | 123 | 4 | 1 | 234 | 90 | 323 | 2.26e-63 | 201 |
| MS.gene98314.t1 | MTR_3g105730 | 45.992 | 237 | 122 | 4 | 1 | 234 | 25 | 258 | 2.69e-63 | 199 |
| MS.gene98314.t1 | MTR_3g105730 | 45.992 | 237 | 122 | 4 | 1 | 234 | 47 | 280 | 6.44e-63 | 198 |
| MS.gene98314.t1 | MTR_1g115570 | 42.797 | 236 | 127 | 5 | 1 | 234 | 108 | 337 | 1.37e-59 | 191 |
| MS.gene98314.t1 | MTR_3g091060 | 43.038 | 237 | 129 | 4 | 1 | 234 | 107 | 340 | 4.70e-58 | 188 |
| MS.gene98314.t1 | MTR_2g078760 | 61.871 | 139 | 53 | 0 | 1 | 139 | 99 | 237 | 6.95e-58 | 184 |
| MS.gene98314.t1 | MTR_5g071550 | 38.776 | 245 | 135 | 7 | 1 | 235 | 136 | 375 | 1.81e-43 | 150 |
| MS.gene98314.t1 | MTR_3g464650 | 36.735 | 245 | 140 | 7 | 1 | 235 | 76 | 315 | 2.25e-39 | 138 |
| MS.gene98314.t1 | MTR_5g024340 | 34.934 | 229 | 131 | 5 | 18 | 234 | 123 | 345 | 8.71e-38 | 135 |
| MS.gene98314.t1 | MTR_1g086350 | 36.017 | 236 | 123 | 7 | 19 | 232 | 16 | 245 | 1.74e-37 | 132 |
| MS.gene98314.t1 | MTR_4g123080 | 36.287 | 237 | 123 | 8 | 18 | 232 | 94 | 324 | 3.39e-37 | 134 |
| MS.gene98314.t1 | MTR_4g123080 | 35.772 | 246 | 130 | 8 | 9 | 232 | 103 | 342 | 5.55e-37 | 133 |
| MS.gene98314.t1 | MTR_1g086350 | 35.833 | 240 | 126 | 7 | 15 | 232 | 98 | 331 | 7.12e-37 | 133 |
| MS.gene98314.t1 | MTR_1g086350 | 35.833 | 240 | 126 | 7 | 15 | 232 | 114 | 347 | 9.78e-37 | 133 |
| MS.gene98314.t1 | MTR_3g107880 | 35.593 | 236 | 133 | 5 | 14 | 235 | 58 | 288 | 2.47e-36 | 130 |
| MS.gene98314.t1 | MTR_4g116420 | 33.333 | 261 | 141 | 8 | 1 | 235 | 98 | 351 | 4.60e-36 | 131 |
| MS.gene98314.t1 | MTR_3g107880 | 35.593 | 236 | 133 | 5 | 14 | 235 | 116 | 346 | 8.79e-36 | 130 |
| MS.gene98314.t1 | MTR_3g107880 | 35.593 | 236 | 133 | 5 | 14 | 235 | 115 | 345 | 9.69e-36 | 130 |
| MS.gene98314.t1 | MTR_3g464700 | 39.024 | 205 | 116 | 6 | 1 | 201 | 100 | 299 | 4.22e-35 | 127 |
| MS.gene98314.t1 | MTR_2g033000 | 34.322 | 236 | 127 | 7 | 19 | 232 | 100 | 329 | 8.42e-35 | 127 |
| MS.gene98314.t1 | MTR_1g075730 | 33.186 | 226 | 130 | 5 | 11 | 234 | 71 | 277 | 6.24e-33 | 120 |
| MS.gene98314.t1 | MTR_1g075730 | 33.186 | 226 | 126 | 5 | 11 | 234 | 71 | 273 | 1.33e-32 | 119 |
| MS.gene98314.t1 | MTR_4g125810 | 35.019 | 257 | 122 | 7 | 19 | 235 | 253 | 504 | 7.98e-32 | 122 |
| MS.gene98314.t1 | MTR_5g071550 | 39.378 | 193 | 108 | 6 | 1 | 189 | 136 | 323 | 8.81e-32 | 119 |
| MS.gene98314.t1 | MTR_6g081850 | 33.878 | 245 | 128 | 9 | 20 | 235 | 80 | 319 | 1.68e-30 | 115 |
| MS.gene98314.t1 | MTR_2g040500 | 33.700 | 273 | 122 | 9 | 19 | 235 | 267 | 536 | 2.57e-30 | 117 |
| MS.gene98314.t1 | MTR_1g050520 | 32.129 | 249 | 152 | 7 | 1 | 235 | 400 | 645 | 6.18e-30 | 117 |
| MS.gene98314.t1 | MTR_1g041475 | 32.743 | 226 | 127 | 4 | 11 | 234 | 71 | 273 | 4.33e-29 | 110 |
| MS.gene98314.t1 | MTR_8g102550 | 34.016 | 244 | 128 | 7 | 19 | 235 | 152 | 389 | 7.60e-29 | 112 |
| MS.gene98314.t1 | MTR_1g015110 | 32.558 | 258 | 130 | 7 | 19 | 235 | 290 | 544 | 1.29e-28 | 113 |
| MS.gene98314.t1 | MTR_3g104710 | 34.109 | 258 | 126 | 8 | 19 | 235 | 286 | 540 | 4.47e-28 | 111 |
| MS.gene98314.t1 | MTR_4g007440 | 32.432 | 259 | 108 | 9 | 1 | 200 | 36 | 286 | 1.17e-27 | 108 |
| MS.gene98314.t1 | MTR_3g105730 | 43.066 | 137 | 74 | 3 | 1 | 134 | 47 | 182 | 2.46e-26 | 102 |
| MS.gene98314.t1 | MTR_1g028300 | 32.800 | 250 | 141 | 7 | 9 | 235 | 135 | 380 | 6.06e-25 | 101 |
| MS.gene98314.t1 | MTR_3g068200 | 30.797 | 276 | 146 | 7 | 1 | 235 | 105 | 376 | 7.58e-25 | 101 |
| MS.gene98314.t1 | MTR_1g014190 | 29.771 | 262 | 117 | 9 | 1 | 203 | 36 | 289 | 1.50e-24 | 100 |
| MS.gene98314.t1 | MTR_1g014190 | 29.771 | 262 | 117 | 9 | 1 | 203 | 74 | 327 | 3.34e-24 | 99.8 |
| MS.gene98314.t1 | MTR_3g105880 | 30.116 | 259 | 114 | 10 | 1 | 200 | 36 | 286 | 9.18e-24 | 98.2 |
| MS.gene98314.t1 | MTR_3g105880 | 30.116 | 259 | 114 | 10 | 1 | 200 | 36 | 286 | 1.34e-23 | 97.1 |
| MS.gene98314.t1 | MTR_5g080680 | 32.877 | 219 | 127 | 5 | 1 | 202 | 114 | 329 | 1.15e-22 | 95.5 |
| MS.gene98314.t1 | MTR_4g118340 | 28.030 | 264 | 145 | 11 | 14 | 235 | 81 | 341 | 2.27e-22 | 94.7 |
| MS.gene98314.t1 | MTR_7g112490 | 37.931 | 203 | 98 | 11 | 56 | 232 | 159 | 359 | 1.23e-21 | 92.4 |
| MS.gene98314.t1 | MTR_7g112490 | 37.931 | 203 | 98 | 11 | 56 | 232 | 177 | 377 | 1.24e-21 | 92.4 |
| MS.gene98314.t1 | MTR_5g009370 | 30.038 | 263 | 146 | 8 | 6 | 234 | 72 | 330 | 4.44e-21 | 90.1 |
| MS.gene98314.t1 | MTR_1g083690 | 37.811 | 201 | 98 | 9 | 59 | 234 | 152 | 350 | 6.28e-21 | 90.1 |
| MS.gene98314.t1 | MTR_1g067210 | 27.174 | 276 | 136 | 8 | 19 | 232 | 76 | 348 | 2.92e-20 | 88.6 |
| MS.gene98314.t1 | MTR_4g120410 | 36.275 | 204 | 103 | 10 | 56 | 234 | 151 | 352 | 5.57e-20 | 87.4 |
| MS.gene98314.t1 | MTR_1g110210 | 29.661 | 236 | 140 | 8 | 17 | 232 | 66 | 295 | 2.02e-19 | 85.5 |
| MS.gene98314.t1 | MTR_7g090550 | 29.435 | 248 | 119 | 9 | 1 | 202 | 55 | 292 | 2.75e-19 | 86.3 |
| MS.gene98314.t1 | MTR_7g100240 | 27.899 | 276 | 134 | 10 | 19 | 232 | 71 | 343 | 3.38e-19 | 85.5 |
| MS.gene98314.t1 | MTR_2g435550 | 34.082 | 267 | 120 | 14 | 19 | 234 | 92 | 353 | 4.02e-19 | 85.1 |
| MS.gene98314.t1 | MTR_2g435550 | 34.082 | 267 | 120 | 14 | 19 | 234 | 78 | 339 | 5.10e-19 | 84.7 |
| MS.gene98314.t1 | MTR_1g116260 | 27.402 | 281 | 129 | 9 | 19 | 232 | 80 | 352 | 5.51e-19 | 85.1 |
| MS.gene98314.t1 | MTR_2g435550 | 34.426 | 244 | 111 | 12 | 19 | 218 | 92 | 330 | 5.91e-19 | 85.1 |
| MS.gene98314.t1 | MTR_7g081020 | 27.338 | 278 | 133 | 10 | 19 | 232 | 76 | 348 | 1.26e-18 | 84.0 |
| MS.gene98314.t1 | MTR_3g032700 | 30.041 | 243 | 124 | 9 | 19 | 219 | 68 | 306 | 1.55e-18 | 84.0 |
| MS.gene98314.t1 | MTR_3g032660 | 30.041 | 243 | 124 | 9 | 19 | 219 | 68 | 306 | 2.19e-18 | 83.6 |
| MS.gene98314.t1 | MTR_1g019760 | 28.205 | 234 | 142 | 8 | 19 | 232 | 65 | 292 | 3.06e-18 | 83.2 |
| MS.gene98314.t1 | MTR_1g112840 | 27.536 | 276 | 135 | 9 | 19 | 232 | 81 | 353 | 4.16e-18 | 82.8 |
| MS.gene98314.t1 | MTR_1g019760 | 28.205 | 234 | 142 | 8 | 19 | 232 | 65 | 292 | 4.34e-18 | 82.8 |
| MS.gene98314.t1 | MTR_7g081020 | 28.319 | 226 | 117 | 7 | 19 | 202 | 76 | 298 | 5.38e-18 | 81.6 |
| MS.gene98314.t1 | MTR_8g074930 | 26.812 | 276 | 137 | 9 | 19 | 232 | 79 | 351 | 1.22e-17 | 81.3 |
| MS.gene98314.t1 | MTR_7g070510 | 38.854 | 157 | 80 | 6 | 79 | 220 | 188 | 343 | 1.74e-17 | 81.3 |
| MS.gene98314.t1 | MTR_2g020970 | 26.217 | 267 | 153 | 9 | 11 | 235 | 78 | 342 | 2.01e-17 | 80.5 |
| MS.gene98314.t1 | MTR_7g112430 | 28.151 | 238 | 141 | 7 | 17 | 232 | 66 | 295 | 2.66e-17 | 80.5 |
| MS.gene98314.t1 | MTR_7g021530 | 38.889 | 180 | 90 | 9 | 56 | 218 | 117 | 293 | 3.03e-17 | 79.7 |
| MS.gene98314.t1 | MTR_4g123080 | 38.333 | 120 | 59 | 3 | 123 | 232 | 115 | 229 | 3.25e-17 | 78.6 |
| MS.gene98314.t1 | MTR_2g020970 | 26.119 | 268 | 154 | 9 | 10 | 235 | 77 | 342 | 3.27e-17 | 80.1 |
| MS.gene98314.t1 | MTR_7g080170 | 38.650 | 163 | 80 | 7 | 56 | 200 | 75 | 235 | 6.54e-17 | 79.3 |
| MS.gene98314.t1 | MTR_7g080170 | 38.650 | 163 | 80 | 7 | 56 | 200 | 183 | 343 | 9.01e-17 | 79.0 |
| MS.gene98314.t1 | MTR_7g021530 | 38.889 | 180 | 90 | 9 | 56 | 218 | 167 | 343 | 9.29e-17 | 79.0 |
| MS.gene98314.t1 | MTR_7g021530 | 38.889 | 180 | 90 | 9 | 56 | 218 | 208 | 384 | 1.14e-16 | 78.6 |
| MS.gene98314.t1 | MTR_1g083750 | 29.114 | 237 | 136 | 8 | 19 | 232 | 68 | 295 | 1.36e-16 | 78.6 |
| MS.gene98314.t1 | MTR_8g017240 | 39.106 | 179 | 83 | 9 | 79 | 234 | 164 | 339 | 1.98e-16 | 77.8 |
| MS.gene98314.t1 | MTR_2g090190 | 36.250 | 160 | 82 | 7 | 59 | 200 | 165 | 322 | 4.45e-16 | 77.0 |
| MS.gene98314.t1 | MTR_7g090530 | 26.642 | 274 | 148 | 11 | 2 | 229 | 52 | 318 | 5.53e-16 | 76.6 |
| MS.gene98314.t1 | MTR_4g013295 | 37.107 | 159 | 83 | 6 | 78 | 220 | 165 | 322 | 2.22e-15 | 74.7 |
| MS.gene98314.t1 | MTR_5g071550 | 35.971 | 139 | 81 | 5 | 1 | 135 | 136 | 270 | 2.23e-15 | 73.9 |
| MS.gene98314.t1 | MTR_7g029240 | 31.092 | 238 | 138 | 11 | 17 | 232 | 66 | 299 | 4.08e-15 | 74.3 |
| MS.gene98314.t1 | MTR_3g101540 | 27.004 | 237 | 141 | 8 | 19 | 232 | 66 | 293 | 5.65e-15 | 73.6 |
| MS.gene98314.t1 | MTR_3g101540 | 27.004 | 237 | 141 | 8 | 19 | 232 | 66 | 293 | 6.07e-15 | 73.6 |
| MS.gene98314.t1 | MTR_4g113480 | 29.661 | 236 | 124 | 8 | 1 | 200 | 60 | 289 | 6.52e-15 | 73.9 |
| MS.gene98314.t1 | MTR_1g016620 | 30.667 | 225 | 115 | 10 | 16 | 200 | 64 | 287 | 2.47e-14 | 71.6 |
| MS.gene98314.t1 | MTR_8g074930 | 27.426 | 237 | 108 | 8 | 57 | 232 | 6 | 239 | 6.32e-14 | 69.7 |
| MS.gene98314.t1 | MTR_2g033910 | 26.224 | 286 | 146 | 10 | 10 | 232 | 65 | 348 | 2.07e-13 | 68.9 |
| MS.gene98314.t1 | MTR_1g083750 | 31.395 | 172 | 99 | 5 | 76 | 232 | 36 | 203 | 5.73e-13 | 67.4 |
| MS.gene98314.t1 | MTR_1g106855 | 25.899 | 278 | 133 | 10 | 22 | 232 | 64 | 335 | 6.20e-12 | 64.7 |
| MS.gene98314.t1 | MTR_1g071370 | 29.302 | 215 | 91 | 9 | 77 | 232 | 224 | 436 | 8.60e-12 | 64.7 |
| MS.gene98314.t1 | MTR_3g032590 | 29.952 | 207 | 96 | 8 | 46 | 219 | 122 | 312 | 1.16e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98314.t1 | AT1G34750 | 77.021 | 235 | 54 | 0 | 1 | 235 | 48 | 282 | 2.24e-135 | 382 |
| MS.gene98314.t1 | AT1G34750 | 77.021 | 235 | 54 | 0 | 1 | 235 | 48 | 282 | 2.24e-135 | 382 |
| MS.gene98314.t1 | AT1G34750 | 77.021 | 235 | 54 | 0 | 1 | 235 | 48 | 282 | 2.24e-135 | 382 |
| MS.gene98314.t1 | AT1G22280 | 74.468 | 235 | 60 | 0 | 1 | 235 | 47 | 281 | 1.44e-131 | 372 |
| MS.gene98314.t1 | AT1G22280 | 73.029 | 241 | 59 | 2 | 1 | 235 | 47 | 287 | 4.16e-129 | 366 |
| MS.gene98314.t1 | AT1G78200 | 65.546 | 238 | 79 | 2 | 1 | 235 | 1 | 238 | 1.27e-113 | 325 |
| MS.gene98314.t1 | AT1G78200 | 65.546 | 238 | 79 | 2 | 1 | 235 | 1 | 238 | 1.27e-113 | 325 |
| MS.gene98314.t1 | AT1G78200 | 65.546 | 238 | 79 | 2 | 1 | 235 | 46 | 283 | 2.99e-113 | 326 |
| MS.gene98314.t1 | AT1G78200 | 65.546 | 238 | 79 | 2 | 1 | 235 | 46 | 283 | 2.99e-113 | 326 |
| MS.gene98314.t1 | AT1G78200 | 65.546 | 238 | 79 | 2 | 1 | 235 | 46 | 283 | 2.99e-113 | 326 |
| MS.gene98314.t1 | AT1G34750 | 76.000 | 200 | 46 | 1 | 1 | 200 | 48 | 245 | 1.85e-109 | 315 |
| MS.gene98314.t1 | AT4G28400 | 63.404 | 235 | 86 | 0 | 1 | 235 | 27 | 261 | 1.20e-106 | 308 |
| MS.gene98314.t1 | AT4G28400 | 63.404 | 235 | 86 | 0 | 1 | 235 | 49 | 283 | 2.38e-106 | 308 |
| MS.gene98314.t1 | AT3G15260 | 63.404 | 235 | 86 | 0 | 1 | 235 | 55 | 289 | 3.48e-104 | 303 |
| MS.gene98314.t1 | AT3G15260 | 63.404 | 235 | 86 | 0 | 1 | 235 | 55 | 289 | 3.48e-104 | 303 |
| MS.gene98314.t1 | AT2G20630 | 61.277 | 235 | 91 | 0 | 1 | 235 | 45 | 279 | 4.86e-104 | 302 |
| MS.gene98314.t1 | AT2G20630 | 61.111 | 234 | 91 | 0 | 1 | 234 | 45 | 278 | 4.66e-102 | 298 |
| MS.gene98314.t1 | AT4G28400 | 62.304 | 191 | 72 | 0 | 1 | 191 | 49 | 239 | 7.17e-83 | 248 |
| MS.gene98314.t1 | AT2G34740 | 52.766 | 235 | 109 | 2 | 1 | 234 | 101 | 334 | 5.98e-80 | 243 |
| MS.gene98314.t1 | AT1G22280 | 78.417 | 139 | 30 | 0 | 1 | 139 | 47 | 185 | 6.25e-76 | 228 |
| MS.gene98314.t1 | AT4G31750 | 47.257 | 237 | 119 | 4 | 1 | 234 | 46 | 279 | 3.76e-67 | 209 |
| MS.gene98314.t1 | AT4G31750 | 47.257 | 237 | 119 | 4 | 1 | 234 | 46 | 279 | 4.68e-67 | 209 |
| MS.gene98314.t1 | AT4G31750 | 47.257 | 237 | 119 | 4 | 1 | 234 | 46 | 279 | 4.68e-67 | 209 |
| MS.gene98314.t1 | AT5G10740 | 47.917 | 240 | 113 | 5 | 1 | 234 | 46 | 279 | 1.22e-66 | 210 |
| MS.gene98314.t1 | AT5G10740 | 47.917 | 240 | 113 | 5 | 1 | 234 | 46 | 279 | 1.22e-66 | 210 |
| MS.gene98314.t1 | AT5G24940 | 47.679 | 237 | 118 | 4 | 1 | 234 | 46 | 279 | 1.48e-65 | 209 |
| MS.gene98314.t1 | AT2G34740 | 53.125 | 192 | 88 | 2 | 1 | 191 | 115 | 305 | 3.00e-65 | 205 |
| MS.gene98314.t1 | AT2G34740 | 53.125 | 192 | 88 | 2 | 1 | 191 | 97 | 287 | 3.04e-65 | 204 |
| MS.gene98314.t1 | AT5G53140 | 41.597 | 238 | 133 | 4 | 1 | 235 | 114 | 348 | 3.58e-60 | 195 |
| MS.gene98314.t1 | AT5G53140 | 41.597 | 238 | 133 | 4 | 1 | 235 | 114 | 348 | 3.58e-60 | 195 |
| MS.gene98314.t1 | AT1G43900 | 40.084 | 237 | 135 | 5 | 1 | 234 | 136 | 368 | 4.72e-54 | 178 |
| MS.gene98314.t1 | AT2G33700 | 36.220 | 254 | 136 | 7 | 1 | 234 | 97 | 344 | 2.00e-41 | 145 |
| MS.gene98314.t1 | AT3G62260 | 36.226 | 265 | 132 | 8 | 1 | 234 | 1 | 259 | 7.29e-41 | 142 |
| MS.gene98314.t1 | AT1G07160 | 39.676 | 247 | 131 | 9 | 1 | 234 | 135 | 376 | 3.05e-40 | 142 |
| MS.gene98314.t1 | AT3G62260 | 36.226 | 265 | 132 | 8 | 1 | 234 | 91 | 349 | 3.62e-40 | 142 |
| MS.gene98314.t1 | AT3G62260 | 36.226 | 265 | 132 | 8 | 1 | 234 | 90 | 348 | 4.03e-40 | 142 |
| MS.gene98314.t1 | AT2G25620 | 36.910 | 233 | 122 | 6 | 19 | 232 | 128 | 354 | 7.29e-38 | 136 |
| MS.gene98314.t1 | AT2G25620 | 36.910 | 233 | 122 | 6 | 19 | 232 | 128 | 354 | 7.29e-38 | 136 |
| MS.gene98314.t1 | AT3G51470 | 33.772 | 228 | 133 | 5 | 19 | 234 | 62 | 283 | 8.17e-38 | 134 |
| MS.gene98314.t1 | AT2G30020 | 38.618 | 246 | 136 | 9 | 1 | 235 | 152 | 393 | 1.88e-37 | 135 |
| MS.gene98314.t1 | AT3G51470 | 33.772 | 228 | 133 | 5 | 19 | 234 | 106 | 327 | 2.98e-37 | 134 |
| MS.gene98314.t1 | AT2G40180 | 36.364 | 253 | 136 | 9 | 1 | 235 | 141 | 386 | 1.13e-36 | 133 |
| MS.gene98314.t1 | AT3G17250 | 34.426 | 244 | 128 | 6 | 17 | 234 | 156 | 393 | 1.77e-35 | 130 |
| MS.gene98314.t1 | AT1G48040 | 35.391 | 243 | 123 | 7 | 18 | 234 | 115 | 349 | 2.71e-34 | 126 |
| MS.gene98314.t1 | AT1G67820 | 34.483 | 203 | 123 | 5 | 1 | 198 | 97 | 294 | 3.39e-29 | 113 |
| MS.gene98314.t1 | AT4G26080 | 33.725 | 255 | 128 | 7 | 19 | 235 | 172 | 423 | 5.37e-29 | 113 |
| MS.gene98314.t1 | AT1G67820 | 34.483 | 203 | 123 | 5 | 1 | 198 | 133 | 330 | 5.89e-29 | 113 |
| MS.gene98314.t1 | AT2G29380 | 32.812 | 256 | 125 | 9 | 20 | 235 | 113 | 361 | 1.02e-28 | 111 |
| MS.gene98314.t1 | AT5G57050 | 33.984 | 256 | 127 | 9 | 19 | 235 | 120 | 372 | 1.03e-28 | 111 |
| MS.gene98314.t1 | AT2G40860 | 32.157 | 255 | 143 | 7 | 1 | 235 | 307 | 551 | 1.14e-28 | 113 |
| MS.gene98314.t1 | AT2G40860 | 32.157 | 255 | 143 | 7 | 1 | 235 | 405 | 649 | 1.24e-28 | 113 |
| MS.gene98314.t1 | AT5G57050 | 33.984 | 256 | 127 | 9 | 19 | 235 | 160 | 412 | 2.05e-28 | 111 |
| MS.gene98314.t1 | AT3G23360 | 30.303 | 231 | 125 | 6 | 9 | 234 | 60 | 259 | 6.59e-27 | 104 |
| MS.gene98314.t1 | AT2G25070 | 27.815 | 302 | 144 | 10 | 1 | 235 | 36 | 330 | 2.02e-26 | 105 |
| MS.gene98314.t1 | AT2G25070 | 27.815 | 302 | 144 | 10 | 1 | 235 | 36 | 330 | 2.02e-26 | 105 |
| MS.gene98314.t1 | AT1G72770 | 32.963 | 270 | 123 | 10 | 19 | 235 | 238 | 502 | 5.50e-26 | 105 |
| MS.gene98314.t1 | AT1G72770 | 32.963 | 270 | 123 | 10 | 19 | 235 | 238 | 502 | 5.50e-26 | 105 |
| MS.gene98314.t1 | AT1G72770 | 32.963 | 270 | 123 | 10 | 19 | 235 | 238 | 502 | 5.50e-26 | 105 |
| MS.gene98314.t1 | AT5G51760 | 33.094 | 278 | 128 | 10 | 13 | 235 | 108 | 382 | 4.59e-25 | 102 |
| MS.gene98314.t1 | AT1G07430 | 32.870 | 216 | 122 | 6 | 6 | 202 | 144 | 355 | 4.76e-25 | 102 |
| MS.gene98314.t1 | AT1G18030 | 30.204 | 245 | 137 | 9 | 20 | 235 | 110 | 349 | 6.14e-25 | 101 |
| MS.gene98314.t1 | AT5G51760 | 33.094 | 278 | 128 | 10 | 13 | 235 | 138 | 412 | 6.78e-25 | 101 |
| MS.gene98314.t1 | AT4G31860 | 30.888 | 259 | 112 | 9 | 1 | 200 | 36 | 286 | 7.26e-25 | 99.8 |
| MS.gene98314.t1 | AT4G31860 | 29.043 | 303 | 139 | 12 | 1 | 235 | 36 | 330 | 7.43e-25 | 100 |
| MS.gene98314.t1 | AT1G17550 | 31.481 | 270 | 128 | 7 | 19 | 235 | 237 | 502 | 7.45e-25 | 102 |
| MS.gene98314.t1 | AT1G17550 | 31.481 | 270 | 128 | 7 | 19 | 235 | 237 | 502 | 7.45e-25 | 102 |
| MS.gene98314.t1 | AT2G40860 | 31.535 | 241 | 135 | 7 | 1 | 221 | 405 | 635 | 8.33e-25 | 102 |
| MS.gene98314.t1 | AT5G59220 | 35.533 | 197 | 107 | 6 | 22 | 202 | 151 | 343 | 1.83e-24 | 100 |
| MS.gene98314.t1 | AT3G16800 | 42.188 | 192 | 84 | 10 | 69 | 235 | 65 | 254 | 2.61e-23 | 95.1 |
| MS.gene98314.t1 | AT3G16800 | 42.188 | 192 | 84 | 10 | 69 | 235 | 65 | 254 | 2.61e-23 | 95.1 |
| MS.gene98314.t1 | AT3G11410 | 30.909 | 220 | 123 | 5 | 9 | 202 | 127 | 343 | 3.47e-23 | 97.1 |
| MS.gene98314.t1 | AT3G05640 | 39.706 | 204 | 96 | 10 | 56 | 234 | 148 | 349 | 5.19e-23 | 95.9 |
| MS.gene98314.t1 | AT3G05640 | 39.706 | 204 | 96 | 10 | 56 | 234 | 148 | 349 | 5.19e-23 | 95.9 |
| MS.gene98314.t1 | AT3G05640 | 39.706 | 204 | 96 | 10 | 56 | 234 | 148 | 349 | 5.19e-23 | 95.9 |
| MS.gene98314.t1 | AT3G16800 | 42.188 | 192 | 84 | 10 | 69 | 235 | 160 | 349 | 1.52e-22 | 94.7 |
| MS.gene98314.t1 | AT3G16800 | 42.188 | 192 | 84 | 10 | 69 | 235 | 160 | 349 | 1.52e-22 | 94.7 |
| MS.gene98314.t1 | AT3G16800 | 42.188 | 192 | 84 | 10 | 69 | 235 | 160 | 349 | 1.52e-22 | 94.7 |
| MS.gene98314.t1 | AT5G27930 | 38.614 | 202 | 97 | 9 | 56 | 232 | 153 | 352 | 1.81e-22 | 94.7 |
| MS.gene98314.t1 | AT5G27930 | 38.614 | 202 | 97 | 9 | 56 | 232 | 153 | 352 | 1.81e-22 | 94.7 |
| MS.gene98314.t1 | AT2G20050 | 27.559 | 254 | 143 | 9 | 19 | 232 | 143 | 395 | 7.99e-22 | 94.4 |
| MS.gene98314.t1 | AT2G20050 | 27.559 | 254 | 143 | 9 | 19 | 232 | 143 | 395 | 8.96e-22 | 94.0 |
| MS.gene98314.t1 | AT4G31860 | 30.645 | 248 | 105 | 9 | 1 | 189 | 36 | 275 | 9.32e-22 | 91.3 |
| MS.gene98314.t1 | AT1G68410 | 30.078 | 256 | 148 | 10 | 2 | 232 | 51 | 300 | 2.59e-21 | 92.0 |
| MS.gene98314.t1 | AT1G68410 | 30.078 | 256 | 148 | 10 | 2 | 232 | 51 | 300 | 2.59e-21 | 92.0 |
| MS.gene98314.t1 | AT1G68410 | 30.078 | 256 | 148 | 10 | 2 | 232 | 51 | 300 | 2.59e-21 | 92.0 |
| MS.gene98314.t1 | AT1G68410 | 30.078 | 256 | 148 | 10 | 2 | 232 | 51 | 300 | 2.59e-21 | 92.0 |
| MS.gene98314.t1 | AT5G66080 | 28.881 | 277 | 130 | 9 | 19 | 232 | 82 | 354 | 3.38e-21 | 91.3 |
| MS.gene98314.t1 | AT1G09160 | 32.051 | 234 | 133 | 9 | 19 | 232 | 68 | 295 | 2.31e-20 | 89.4 |
| MS.gene98314.t1 | AT1G09160 | 32.051 | 234 | 133 | 9 | 19 | 232 | 68 | 295 | 2.31e-20 | 89.4 |
| MS.gene98314.t1 | AT4G08260 | 30.705 | 241 | 129 | 7 | 1 | 235 | 1 | 209 | 2.40e-20 | 86.3 |
| MS.gene98314.t1 | AT3G51370 | 28.674 | 279 | 128 | 10 | 19 | 232 | 79 | 351 | 3.13e-20 | 88.6 |
| MS.gene98314.t1 | AT3G51370 | 28.674 | 279 | 128 | 10 | 19 | 232 | 79 | 351 | 3.13e-20 | 88.6 |
| MS.gene98314.t1 | AT1G18030 | 32.143 | 196 | 104 | 7 | 20 | 191 | 110 | 300 | 5.78e-20 | 87.0 |
| MS.gene98314.t1 | AT4G27800 | 28.626 | 262 | 130 | 8 | 21 | 231 | 90 | 345 | 6.62e-20 | 87.8 |
| MS.gene98314.t1 | AT4G38520 | 27.817 | 284 | 133 | 11 | 17 | 234 | 78 | 355 | 2.07e-19 | 86.3 |
| MS.gene98314.t1 | AT4G38520 | 27.817 | 284 | 133 | 11 | 17 | 234 | 78 | 355 | 2.07e-19 | 86.3 |
| MS.gene98314.t1 | AT1G79630 | 35.000 | 200 | 104 | 8 | 59 | 234 | 91 | 288 | 8.05e-19 | 84.7 |
| MS.gene98314.t1 | AT1G79630 | 35.000 | 200 | 104 | 8 | 59 | 234 | 91 | 288 | 8.05e-19 | 84.7 |
| MS.gene98314.t1 | AT1G79630 | 35.000 | 200 | 104 | 8 | 59 | 234 | 91 | 288 | 8.05e-19 | 84.7 |
| MS.gene98314.t1 | AT1G79630 | 35.000 | 200 | 104 | 8 | 59 | 234 | 91 | 288 | 8.05e-19 | 84.7 |
| MS.gene98314.t1 | AT3G27140 | 30.702 | 228 | 100 | 6 | 14 | 235 | 14 | 189 | 9.62e-19 | 82.4 |
| MS.gene98314.t1 | AT1G79630 | 35.000 | 200 | 104 | 8 | 59 | 234 | 131 | 328 | 1.04e-18 | 84.7 |
| MS.gene98314.t1 | AT1G79630 | 35.000 | 200 | 104 | 8 | 59 | 234 | 131 | 328 | 1.04e-18 | 84.7 |
| MS.gene98314.t1 | AT1G79630 | 35.000 | 200 | 104 | 8 | 59 | 234 | 201 | 398 | 1.92e-18 | 84.0 |
| MS.gene98314.t1 | AT1G79630 | 35.000 | 200 | 104 | 8 | 59 | 234 | 197 | 394 | 2.08e-18 | 84.0 |
| MS.gene98314.t1 | AT3G12620 | 29.435 | 248 | 129 | 8 | 19 | 224 | 83 | 326 | 2.26e-18 | 83.2 |
| MS.gene98314.t1 | AT3G12620 | 29.435 | 248 | 129 | 8 | 19 | 224 | 83 | 326 | 2.26e-18 | 83.2 |
| MS.gene98314.t1 | AT1G47380 | 27.542 | 236 | 145 | 9 | 17 | 232 | 62 | 291 | 4.91e-18 | 82.8 |
| MS.gene98314.t1 | AT3G06270 | 25.681 | 257 | 150 | 9 | 19 | 235 | 88 | 343 | 4.93e-18 | 82.0 |
| MS.gene98314.t1 | AT4G27800 | 28.455 | 246 | 122 | 8 | 21 | 219 | 90 | 328 | 2.31e-17 | 80.1 |
| MS.gene98314.t1 | AT5G02760 | 29.412 | 221 | 115 | 7 | 19 | 200 | 72 | 290 | 2.34e-17 | 80.5 |
| MS.gene98314.t1 | AT1G16220 | 34.000 | 200 | 106 | 8 | 59 | 234 | 178 | 375 | 2.67e-17 | 80.9 |
| MS.gene98314.t1 | AT3G55050 | 27.500 | 280 | 136 | 9 | 16 | 232 | 81 | 356 | 3.17e-17 | 80.1 |
| MS.gene98314.t1 | AT3G55050 | 27.500 | 280 | 136 | 9 | 16 | 232 | 81 | 356 | 3.17e-17 | 80.1 |
| MS.gene98314.t1 | AT5G06750 | 29.435 | 248 | 126 | 8 | 22 | 224 | 85 | 328 | 4.20e-17 | 79.7 |
| MS.gene98314.t1 | AT5G06750 | 29.435 | 248 | 126 | 8 | 22 | 224 | 85 | 328 | 4.20e-17 | 79.7 |
| MS.gene98314.t1 | AT5G01700 | 37.580 | 157 | 82 | 6 | 79 | 220 | 112 | 267 | 6.11e-17 | 79.0 |
| MS.gene98314.t1 | AT4G03415 | 35.673 | 171 | 89 | 8 | 47 | 200 | 165 | 331 | 6.72e-17 | 79.3 |
| MS.gene98314.t1 | AT4G03415 | 35.673 | 171 | 89 | 8 | 47 | 200 | 165 | 331 | 6.72e-17 | 79.3 |
| MS.gene98314.t1 | AT4G03415 | 35.673 | 171 | 89 | 8 | 47 | 200 | 165 | 331 | 6.72e-17 | 79.3 |
| MS.gene98314.t1 | AT5G01700 | 37.580 | 157 | 82 | 6 | 79 | 220 | 161 | 316 | 1.70e-16 | 77.8 |
| MS.gene98314.t1 | AT4G27800 | 28.384 | 229 | 111 | 7 | 21 | 202 | 90 | 312 | 2.44e-16 | 77.0 |
| MS.gene98314.t1 | AT5G66080 | 29.412 | 238 | 102 | 8 | 57 | 232 | 17 | 250 | 2.61e-16 | 76.6 |
| MS.gene98314.t1 | AT3G51370 | 28.992 | 238 | 103 | 8 | 57 | 232 | 33 | 266 | 9.86e-16 | 75.1 |
| MS.gene98314.t1 | AT3G02750 | 36.066 | 183 | 97 | 7 | 56 | 220 | 192 | 372 | 1.55e-15 | 75.5 |
| MS.gene98314.t1 | AT3G02750 | 36.066 | 183 | 97 | 7 | 56 | 220 | 192 | 372 | 1.55e-15 | 75.5 |
| MS.gene98314.t1 | AT4G32950 | 30.603 | 232 | 127 | 11 | 15 | 218 | 68 | 293 | 4.55e-15 | 73.6 |
| MS.gene98314.t1 | AT1G03590 | 33.898 | 177 | 89 | 8 | 42 | 200 | 155 | 321 | 5.39e-15 | 73.9 |
| MS.gene98314.t1 | AT3G17090 | 26.117 | 291 | 137 | 13 | 11 | 232 | 75 | 356 | 8.98e-15 | 73.2 |
| MS.gene98314.t1 | AT5G36250 | 34.158 | 202 | 109 | 9 | 56 | 234 | 183 | 383 | 2.38e-14 | 72.0 |
| MS.gene98314.t1 | AT5G26010 | 30.180 | 222 | 103 | 10 | 19 | 200 | 73 | 282 | 1.07e-13 | 69.7 |
| MS.gene98314.t1 | AT2G05050 | 39.394 | 99 | 54 | 2 | 143 | 235 | 92 | 190 | 1.26e-13 | 67.4 |
| MS.gene98314.t1 | AT3G17090 | 26.778 | 239 | 117 | 10 | 11 | 200 | 75 | 304 | 1.97e-13 | 68.9 |
| MS.gene98314.t1 | AT3G63340 | 27.982 | 218 | 96 | 8 | 77 | 235 | 231 | 446 | 5.67e-13 | 68.2 |
| MS.gene98314.t1 | AT3G63340 | 27.982 | 218 | 96 | 8 | 77 | 235 | 231 | 446 | 5.94e-13 | 68.2 |
| MS.gene98314.t1 | AT3G63340 | 27.982 | 218 | 96 | 8 | 77 | 235 | 231 | 446 | 6.03e-13 | 68.2 |
| MS.gene98314.t1 | AT3G63340 | 27.982 | 218 | 96 | 8 | 77 | 235 | 231 | 446 | 6.34e-13 | 68.2 |
| MS.gene98314.t1 | AT3G63340 | 27.982 | 218 | 96 | 8 | 77 | 235 | 231 | 446 | 6.34e-13 | 68.2 |
| MS.gene98314.t1 | AT3G63340 | 27.982 | 218 | 96 | 8 | 77 | 235 | 231 | 446 | 6.34e-13 | 68.2 |
| MS.gene98314.t1 | AT3G63340 | 27.982 | 218 | 96 | 8 | 77 | 235 | 231 | 446 | 6.34e-13 | 68.2 |
| MS.gene98314.t1 | AT3G63340 | 27.982 | 218 | 96 | 8 | 77 | 235 | 231 | 446 | 6.56e-13 | 68.2 |
| MS.gene98314.t1 | AT3G63340 | 27.982 | 218 | 96 | 8 | 77 | 235 | 231 | 446 | 6.56e-13 | 68.2 |
| MS.gene98314.t1 | AT3G63340 | 27.982 | 218 | 96 | 8 | 77 | 235 | 231 | 446 | 6.69e-13 | 68.2 |
| MS.gene98314.t1 | AT5G27930 | 39.073 | 151 | 72 | 8 | 56 | 188 | 153 | 301 | 1.66e-12 | 66.2 |
| MS.gene98314.t1 | AT5G59220 | 34.000 | 150 | 79 | 6 | 22 | 155 | 151 | 296 | 3.70e-12 | 65.1 |
| MS.gene98314.t1 | AT3G63340 | 33.333 | 141 | 77 | 6 | 111 | 235 | 340 | 479 | 7.34e-12 | 65.1 |
| MS.gene98314.t1 | AT5G06750 | 31.492 | 181 | 87 | 5 | 79 | 224 | 68 | 246 | 9.92e-12 | 63.9 |
| MS.gene98314.t1 | AT5G57050 | 33.775 | 151 | 84 | 7 | 19 | 156 | 160 | 307 | 4.08e-11 | 62.0 |
| MS.gene98314.t1 | AT5G36250 | 31.944 | 216 | 109 | 10 | 56 | 234 | 183 | 397 | 4.22e-11 | 62.4 |
Find 43 sgRNAs with CRISPR-Local
Find 72 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATCACATAGTTCTGATTT+AGG | 0.128278 | 3.1:+61092582 | MS.gene98314:CDS |
| TAATGTCTTAGGAGGGATTT+TGG | 0.177043 | 3.1:+61092505 | MS.gene98314:intron |
| TCCTTGCAAGTGATGGAATT+TGG | 0.220725 | 3.1:+61093260 | MS.gene98314:CDS |
| TATCACATAGTTCTGATTTA+GGG | 0.269536 | 3.1:+61092583 | MS.gene98314:CDS |
| AAACAAATGTTTCTGTAAAT+AGG | 0.285064 | 3.1:-61092376 | None:intergenic |
| TGCCAAGTTTGTGCAGTTAC+AGG | 0.290788 | 3.1:+61092296 | MS.gene98314:CDS |
| ATGCTGCCTCGTTCTGTGTT+AGG | 0.300974 | 3.1:-61092735 | None:intergenic |
| GGTGATGTGCCAAGAGTAAA+TGG | 0.312120 | 3.1:+61093130 | MS.gene98314:intron |
| ATATCAGTTGTTTGTACGTC+CGG | 0.346525 | 3.1:-61093214 | None:intergenic |
| GCAGTTACAGGATAAAGAAT+TGG | 0.348814 | 3.1:+61092308 | MS.gene98314:CDS |
| CGAGCTGTTCTTTCAAGAAA+AGG | 0.380614 | 3.1:+61092681 | MS.gene98314:CDS |
| GGTTTATTTGCTATCTATGA+TGG | 0.400323 | 3.1:+61092330 | MS.gene98314:CDS |
| CTGGCTGTTTCTCGCGCATT+CGG | 0.403068 | 3.1:+61093157 | MS.gene98314:CDS |
| CAGTTACAGGATAAAGAATT+GGG | 0.412042 | 3.1:+61092309 | MS.gene98314:CDS |
| ATCCTGTAACTGCACAAACT+TGG | 0.441965 | 3.1:-61092298 | None:intergenic |
| GCCAGTTGTCCATTTACTCT+TGG | 0.452548 | 3.1:-61093139 | None:intergenic |
| TGATCGATGGAAGAAGACTA+TGG | 0.456175 | 3.1:+61092637 | MS.gene98314:CDS |
| TTTCTCGCGCATTCGGAGAC+AGG | 0.464479 | 3.1:+61093164 | MS.gene98314:CDS |
| AGCATATGAGAGCACAGATC+AGG | 0.488510 | 3.1:+61092554 | MS.gene98314:CDS |
| GAGCTGTTCTTTCAAGAAAA+GGG | 0.498758 | 3.1:+61092682 | MS.gene98314:CDS |
| GCCAAGAGTAAATGGACAAC+TGG | 0.502390 | 3.1:+61093138 | MS.gene98314:CDS |
| TCCAAATTCCATCACTTGCA+AGG | 0.505997 | 3.1:-61093261 | None:intergenic |
| TATCAGTTGTTTGTACGTCC+GGG | 0.509050 | 3.1:-61093213 | None:intergenic |
| AGGCGGGTACACGGTCTCCT+AGG | 0.512596 | 3.1:-61092356 | None:intergenic |
| GTCACATTTGCGATCGGACC+CGG | 0.512761 | 3.1:+61093195 | MS.gene98314:CDS |
| GTTTAAAGTACCTGGCAAGT+TGG | 0.525973 | 3.1:-61092781 | None:intergenic |
| ATGCTAATCCTTGCAAGTGA+TGG | 0.527602 | 3.1:+61093253 | MS.gene98314:CDS |
| AGACTATGGATAGCTAATGT+TGG | 0.531821 | 3.1:+61092651 | MS.gene98314:CDS |
| CATAGTTCTGATTTAGGGCA+TGG | 0.532974 | 3.1:+61092588 | MS.gene98314:CDS |
| GCAACATGATAATCCTCCAT+TGG | 0.541831 | 3.1:-61092276 | None:intergenic |
| AAATGTTTCTGTAAATAGGC+GGG | 0.568152 | 3.1:-61092372 | None:intergenic |
| CGAGGCAGCATCGAGACTAG+AGG | 0.583944 | 3.1:+61092747 | MS.gene98314:CDS |
| GCTATCTATGATGGTCACCT+AGG | 0.596085 | 3.1:+61092339 | MS.gene98314:CDS |
| CAAATGTTTCTGTAAATAGG+CGG | 0.596245 | 3.1:-61092373 | None:intergenic |
| AATGGCTAATCAAGAAGCAG+TGG | 0.600653 | 3.1:+61093375 | MS.gene98314:CDS |
| TCTGTAAATAGGCGGGTACA+CGG | 0.611832 | 3.1:-61092365 | None:intergenic |
| AGATGATATATCTTGTGTTG+TGG | 0.625754 | 3.1:+61093474 | MS.gene98314:CDS |
| TCTCAAGTCACATTTGCGAT+CGG | 0.627665 | 3.1:+61093189 | MS.gene98314:CDS |
| TGCAAGTGATGGAATTTGGA+AGG | 0.633405 | 3.1:+61093264 | MS.gene98314:CDS |
| CACGAACCTAACACAGAACG+AGG | 0.638936 | 3.1:+61092729 | MS.gene98314:CDS |
| AGTTCTGATTTAGGGCATGG+TGG | 0.647148 | 3.1:+61092591 | MS.gene98314:CDS |
| GTAACTGCGATATTGATCGA+TGG | 0.653968 | 3.1:+61092624 | MS.gene98314:CDS |
| GGCAGCATCGAGACTAGAGG+TGG | 0.661249 | 3.1:+61092750 | MS.gene98314:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAACAAATGTTTCTGTAAAT+AGG | - | chr3.1:61092379-61092398 | None:intergenic | 20.0% |
| !!! | ATTTGTTTAGCAACATTTTA+AGG | + | chr3.1:61092391-61092410 | MS.gene98314:CDS | 20.0% |
| !!! | TTTGTTTAGCAACATTTTAA+GGG | + | chr3.1:61092392-61092411 | MS.gene98314:CDS | 20.0% |
| ! | AGTACAAAATGTTGTCTATT+AGG | + | chr3.1:61093001-61093020 | MS.gene98314:intron | 25.0% |
| ! | GTACAAAATGTTGTCTATTA+GGG | + | chr3.1:61093002-61093021 | MS.gene98314:intron | 25.0% |
| ! | TTGTACTAAATAGTATATCG+CGG | - | chr3.1:61092988-61093007 | None:intergenic | 25.0% |
| !! | AATTAATGGTTTAAAGTACC+TGG | - | chr3.1:61092792-61092811 | None:intergenic | 25.0% |
| !! | ATTGATTTAATGTCTTAGGA+GGG | + | chr3.1:61092498-61092517 | MS.gene98314:intron | 25.0% |
| !! | CAGAATTCAGGTTTAATTAA+TGG | - | chr3.1:61092806-61092825 | None:intergenic | 25.0% |
| !!! | AATTTGTTAAGTAATGTTCG+CGG | - | chr3.1:61093091-61093110 | None:intergenic | 25.0% |
| !!! | GCTTATTGATTTAATGTCTT+AGG | + | chr3.1:61092494-61092513 | MS.gene98314:intron | 25.0% |
| !!! | TATCACATAGTTCTGATTTA+GGG | + | chr3.1:61092583-61092602 | MS.gene98314:CDS | 25.0% |
| !!! | TATTGATTTAATGTCTTAGG+AGG | + | chr3.1:61092497-61092516 | MS.gene98314:intron | 25.0% |
| AGATGATATATCTTGTGTTG+TGG | + | chr3.1:61093474-61093493 | MS.gene98314:CDS | 30.0% | |
| ATCAATAAGCACAATAGTAG+AGG | - | chr3.1:61092484-61092503 | None:intergenic | 30.0% | |
| CAGTTACAGGATAAAGAATT+GGG | + | chr3.1:61092309-61092328 | MS.gene98314:CDS | 30.0% | |
| GTGTCAATTGTTTCATCATT+AGG | - | chr3.1:61092831-61092850 | None:intergenic | 30.0% | |
| TCATTTGCATGTGTTAAACT+AGG | + | chr3.1:61093351-61093370 | MS.gene98314:intron | 30.0% | |
| TCTAAGTTCTGCTACATTAT+AGG | - | chr3.1:61092950-61092969 | None:intergenic | 30.0% | |
| TTGTTAAAATGTAGCTAGAG+CGG | + | chr3.1:61092907-61092926 | MS.gene98314:intron | 30.0% | |
| ! | AAATGTTTCTGTAAATAGGC+GGG | - | chr3.1:61092375-61092394 | None:intergenic | 30.0% |
| ! | CAAATGTTTCTGTAAATAGG+CGG | - | chr3.1:61092376-61092395 | None:intergenic | 30.0% |
| ! | TTAATGTTGTTGTTGATGCT+AGG | + | chr3.1:61093109-61093128 | MS.gene98314:intron | 30.0% |
| !! | CTATCACATAGTTCTGATTT+AGG | + | chr3.1:61092582-61092601 | MS.gene98314:CDS | 30.0% |
| !! | GGTTTATTTGCTATCTATGA+TGG | + | chr3.1:61092330-61092349 | MS.gene98314:CDS | 30.0% |
| !!! | CTTTTGAGATAGAAAGAGTA+GGG | - | chr3.1:61092536-61092555 | None:intergenic | 30.0% |
| AGACTATGGATAGCTAATGT+TGG | + | chr3.1:61092651-61092670 | MS.gene98314:CDS | 35.0% | |
| ATATCAGTTGTTTGTACGTC+CGG | - | chr3.1:61093217-61093236 | None:intergenic | 35.0% | |
| CATCATTAGGAACAGAATTC+AGG | - | chr3.1:61092818-61092837 | None:intergenic | 35.0% | |
| GAGCTGTTCTTTCAAGAAAA+GGG | + | chr3.1:61092682-61092701 | MS.gene98314:CDS | 35.0% | |
| GCAGTTACAGGATAAAGAAT+TGG | + | chr3.1:61092308-61092327 | MS.gene98314:CDS | 35.0% | |
| GCATGTGTTAAACTAGGTAA+TGG | + | chr3.1:61093357-61093376 | MS.gene98314:intron | 35.0% | |
| TGCTAACTTTAGCATGCATT+GGG | - | chr3.1:61092856-61092875 | None:intergenic | 35.0% | |
| TTGTCTATTAGGGACTATAG+AGG | + | chr3.1:61093012-61093031 | MS.gene98314:intron | 35.0% | |
| ! | AATGTCTTAGGAGGGATTTT+GGG | + | chr3.1:61092506-61092525 | MS.gene98314:intron | 35.0% |
| ! | TAATGTCTTAGGAGGGATTT+TGG | + | chr3.1:61092505-61092524 | MS.gene98314:intron | 35.0% |
| !! | GTTTAGCAACATTTTAAGGG+AGG | + | chr3.1:61092395-61092414 | MS.gene98314:CDS | 35.0% |
| !!! | AGTTGTTTTGCTGCTTTATG+TGG | - | chr3.1:61093424-61093443 | None:intergenic | 35.0% |
| !!! | GCTTTTGAGATAGAAAGAGT+AGG | - | chr3.1:61092537-61092556 | None:intergenic | 35.0% |
| AATGGCTAATCAAGAAGCAG+TGG | + | chr3.1:61093375-61093394 | MS.gene98314:CDS | 40.0% | |
| ATCCTGTAACTGCACAAACT+TGG | - | chr3.1:61092301-61092320 | None:intergenic | 40.0% | |
| ATGCTAATCCTTGCAAGTGA+TGG | + | chr3.1:61093253-61093272 | MS.gene98314:CDS | 40.0% | |
| CGAGCTGTTCTTTCAAGAAA+AGG | + | chr3.1:61092681-61092700 | MS.gene98314:CDS | 40.0% | |
| GTAACTGCGATATTGATCGA+TGG | + | chr3.1:61092624-61092643 | MS.gene98314:CDS | 40.0% | |
| GTGCTAACTTTAGCATGCAT+TGG | - | chr3.1:61092857-61092876 | None:intergenic | 40.0% | |
| GTTATAGTACTGTTGCGTAG+TGG | + | chr3.1:61093036-61093055 | MS.gene98314:intron | 40.0% | |
| TAAGTAATGTTCGCGGATCA+CGG | - | chr3.1:61093084-61093103 | None:intergenic | 40.0% | |
| TATCAGTTGTTTGTACGTCC+GGG | - | chr3.1:61093216-61093235 | None:intergenic | 40.0% | |
| TCCAAATTCCATCACTTGCA+AGG | - | chr3.1:61093264-61093283 | None:intergenic | 40.0% | |
| TCTCAAGTCACATTTGCGAT+CGG | + | chr3.1:61093189-61093208 | MS.gene98314:CDS | 40.0% | |
| TGATCGATGGAAGAAGACTA+TGG | + | chr3.1:61092637-61092656 | MS.gene98314:CDS | 40.0% | |
| ! | GTTTAAAGTACCTGGCAAGT+TGG | - | chr3.1:61092784-61092803 | None:intergenic | 40.0% |
| ! | TCCTTGCAAGTGATGGAATT+TGG | + | chr3.1:61093260-61093279 | MS.gene98314:CDS | 40.0% |
| ! | TGCAAGTGATGGAATTTGGA+AGG | + | chr3.1:61093264-61093283 | MS.gene98314:CDS | 40.0% |
| !! | CATAGTTCTGATTTAGGGCA+TGG | + | chr3.1:61092588-61092607 | MS.gene98314:CDS | 40.0% |
| GCCAAGAGTAAATGGACAAC+TGG | + | chr3.1:61093138-61093157 | MS.gene98314:CDS | 45.0% | |
| GCCAGTTGTCCATTTACTCT+TGG | - | chr3.1:61093142-61093161 | None:intergenic | 45.0% | |
| GCTATCTATGATGGTCACCT+AGG | + | chr3.1:61092339-61092358 | MS.gene98314:CDS | 45.0% | |
| GGTGATGTGCCAAGAGTAAA+TGG | + | chr3.1:61093130-61093149 | MS.gene98314:intron | 45.0% | |
| TCTGTAAATAGGCGGGTACA+CGG | - | chr3.1:61092368-61092387 | None:intergenic | 45.0% | |
| TGCCAAGTTTGTGCAGTTAC+AGG | + | chr3.1:61092296-61092315 | MS.gene98314:CDS | 45.0% | |
| ! | AGCATATGAGAGCACAGATC+AGG | + | chr3.1:61092554-61092573 | MS.gene98314:CDS | 45.0% |
| ! | AGTTCTGATTTAGGGCATGG+TGG | + | chr3.1:61092591-61092610 | MS.gene98314:CDS | 45.0% |
| ATGCTGCCTCGTTCTGTGTT+AGG | - | chr3.1:61092738-61092757 | None:intergenic | 50.0% | |
| CACGAACCTAACACAGAACG+AGG | + | chr3.1:61092729-61092748 | MS.gene98314:CDS | 50.0% | |
| !! | GGTTTTGTCTCCAACTTGCC+AGG | + | chr3.1:61092771-61092790 | MS.gene98314:CDS | 50.0% |
| GTCACATTTGCGATCGGACC+CGG | + | chr3.1:61093195-61093214 | MS.gene98314:CDS | 55.0% | |
| TTTCTCGCGCATTCGGAGAC+AGG | + | chr3.1:61093164-61093183 | MS.gene98314:CDS | 55.0% | |
| !! | CTGGCTGTTTCTCGCGCATT+CGG | + | chr3.1:61093157-61093176 | MS.gene98314:CDS | 55.0% |
| ! | CGAGGCAGCATCGAGACTAG+AGG | + | chr3.1:61092747-61092766 | MS.gene98314:CDS | 60.0% |
| ! | GGCAGCATCGAGACTAGAGG+TGG | + | chr3.1:61092750-61092769 | MS.gene98314:CDS | 60.0% |
| AGGCGGGTACACGGTCTCCT+AGG | - | chr3.1:61092359-61092378 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 61092279 | 61093510 | 61092279 | ID=MS.gene98314 |
| chr3.1 | mRNA | 61092279 | 61093510 | 61092279 | ID=MS.gene98314.t1;Parent=MS.gene98314 |
| chr3.1 | exon | 61092279 | 61092416 | 61092279 | ID=MS.gene98314.t1.exon1;Parent=MS.gene98314.t1 |
| chr3.1 | CDS | 61092279 | 61092416 | 61092279 | ID=cds.MS.gene98314.t1;Parent=MS.gene98314.t1 |
| chr3.1 | exon | 61092516 | 61092792 | 61092516 | ID=MS.gene98314.t1.exon2;Parent=MS.gene98314.t1 |
| chr3.1 | CDS | 61092516 | 61092792 | 61092516 | ID=cds.MS.gene98314.t1;Parent=MS.gene98314.t1 |
| chr3.1 | exon | 61093131 | 61093285 | 61093131 | ID=MS.gene98314.t1.exon3;Parent=MS.gene98314.t1 |
| chr3.1 | CDS | 61093131 | 61093285 | 61093131 | ID=cds.MS.gene98314.t1;Parent=MS.gene98314.t1 |
| chr3.1 | exon | 61093373 | 61093510 | 61093373 | ID=MS.gene98314.t1.exon4;Parent=MS.gene98314.t1 |
| chr3.1 | CDS | 61093373 | 61093510 | 61093373 | ID=cds.MS.gene98314.t1;Parent=MS.gene98314.t1 |
| Gene Sequence |
| Protein sequence |
