Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014948.t1 | XP_003603240.2 | 99.2 | 717 | 5 | 1 | 1 | 717 | 1 | 716 | 0.00E+00 | 1439.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014948.t1 | P56821 | 78.1 | 718 | 153 | 3 | 1 | 716 | 1 | 716 | 0.0e+00 | 1147.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014948.t1 | G7J950 | 99.2 | 717 | 5 | 1 | 1 | 717 | 1 | 716 | 0.0e+00 | 1439.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene42649 | MS.gene014948 | PPI |
| MS.gene02692 | MS.gene014948 | PPI |
| MS.gene32742 | MS.gene014948 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014948.t1 | MTR_3g105430 | 99.163 | 717 | 5 | 1 | 1 | 717 | 1 | 716 | 0.0 | 1461 |
| MS.gene014948.t1 | MTR_7g056267 | 83.505 | 97 | 16 | 0 | 603 | 699 | 10 | 106 | 8.65e-46 | 160 |
| MS.gene014948.t1 | MTR_4g087280 | 24.000 | 400 | 265 | 14 | 225 | 615 | 51 | 420 | 3.30e-22 | 101 |
| MS.gene014948.t1 | MTR_4g087280 | 24.000 | 400 | 265 | 14 | 225 | 615 | 51 | 420 | 3.90e-22 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014948.t1 | AT5G27640 | 76.197 | 710 | 168 | 1 | 5 | 713 | 1 | 710 | 0.0 | 1157 |
| MS.gene014948.t1 | AT5G27640 | 76.197 | 710 | 168 | 1 | 5 | 713 | 1 | 710 | 0.0 | 1157 |
| MS.gene014948.t1 | AT5G25780 | 76.504 | 698 | 163 | 1 | 17 | 713 | 14 | 711 | 0.0 | 1149 |
| MS.gene014948.t1 | AT5G27640 | 73.505 | 736 | 168 | 2 | 5 | 713 | 1 | 736 | 0.0 | 1144 |
| MS.gene014948.t1 | AT1G49015 | 50.885 | 226 | 91 | 5 | 311 | 535 | 3 | 209 | 7.46e-66 | 217 |
| MS.gene014948.t1 | AT1G73180 | 22.931 | 423 | 290 | 11 | 195 | 610 | 18 | 411 | 2.41e-24 | 107 |
| MS.gene014948.t1 | AT1G73180 | 22.931 | 423 | 290 | 11 | 195 | 610 | 18 | 411 | 2.59e-24 | 107 |
Find 162 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGAAGGATCACTTCTTTC+AGG | 0.197022 | 3.2:+86906694 | MS.gene014948:CDS |
| TCAGTTCATGAAATGGAAAA+TGG | 0.213561 | 3.2:+86906629 | MS.gene014948:CDS |
| TTGCCTGAGTTCTTCTTTGC+TGG | 0.214747 | 3.2:-86905926 | None:intergenic |
| TTCAATATATATAGTTCTTA+TGG | 0.217744 | 3.2:+86907003 | MS.gene014948:intron |
| CTGGAGTTTGATTCTGGATT+TGG | 0.226852 | 3.2:+86903936 | MS.gene014948:CDS |
| ACATACTCACAGAAAATATA+TGG | 0.231895 | 3.2:-86904277 | None:intergenic |
| GAGAATCTGGAGTTTGATTC+TGG | 0.241775 | 3.2:+86903930 | MS.gene014948:CDS |
| TTCACCTGGTGAGAAGTATT+TGG | 0.260721 | 3.2:+86905221 | MS.gene014948:CDS |
| TTTGAAGGTTGAAAATATAA+TGG | 0.262529 | 3.2:+86905676 | MS.gene014948:CDS |
| GAAGACAAAGCTTTGCTTCT+CGG | 0.279856 | 3.2:+86903727 | MS.gene014948:CDS |
| CTCGAGGATTGCTTGGTTCA+TGG | 0.280093 | 3.2:-86905257 | None:intergenic |
| CCTGGAGCATATTCCTTGTT+TGG | 0.282373 | 3.2:-86904350 | None:intergenic |
| TGGAAAATGGATTCAATATA+TGG | 0.298256 | 3.2:+86906642 | MS.gene014948:CDS |
| CTTACAGCACGTTTATAAAC+AGG | 0.307612 | 3.2:-86904832 | None:intergenic |
| GTATGTCACGTTCCTTTATA+CGG | 0.318455 | 3.2:-86906071 | None:intergenic |
| TGCCTGAGTTCTTCTTTGCT+GGG | 0.335374 | 3.2:-86905925 | None:intergenic |
| CATAGATTTGCTGTTATTCA+TGG | 0.340404 | 3.2:+86906162 | MS.gene014948:CDS |
| GTCACCTTTGGGTACTTACT+TGG | 0.345166 | 3.2:+86904984 | MS.gene014948:CDS |
| TCAATGGCAAACATCTTTAT+CGG | 0.350253 | 3.2:+86906669 | MS.gene014948:CDS |
| ATGCAACAGCTTCCATTCAT+TGG | 0.362435 | 3.2:-86907195 | None:intergenic |
| TTCCTCAACTTCAATGTCCT+TGG | 0.368351 | 3.2:-86907288 | None:intergenic |
| TGACATACCTATTGAAGTTC+TGG | 0.372905 | 3.2:+86906086 | MS.gene014948:CDS |
| AGTCAAGAAAGAGGCTGGTC+TGG | 0.374540 | 3.2:-86907030 | None:intergenic |
| AGCAGGCAAATGCTTTGTTT+TGG | 0.385029 | 3.2:+86906274 | MS.gene014948:CDS |
| TAGATACTAATATCAGGCTT+AGG | 0.385115 | 3.2:-86906192 | None:intergenic |
| CTCAACTTGAAGGATCTCTT+TGG | 0.396493 | 3.2:-86907324 | None:intergenic |
| TCCTTCTACTGAAAAGTCCT+TGG | 0.402875 | 3.2:+86904088 | MS.gene014948:CDS |
| AGGAACAAACAATGAAATGA+TGG | 0.426468 | 3.2:-86905723 | None:intergenic |
| ATAGAGTAGATACTAATATC+AGG | 0.429014 | 3.2:-86906198 | None:intergenic |
| TGTTATTCAAGAGGAGAATC+TGG | 0.430382 | 3.2:+86903917 | MS.gene014948:CDS |
| TCGAGCTCCAGAACTTCAAT+AGG | 0.431350 | 3.2:-86906093 | None:intergenic |
| TCATTGTTTGTTCCTGAGAC+AGG | 0.434027 | 3.2:+86905731 | MS.gene014948:CDS |
| ATAAGATCATTGCATTTGCT+TGG | 0.434886 | 3.2:+86906127 | MS.gene014948:CDS |
| CTCTTTCTTGACTGCTGAGA+AGG | 0.436026 | 3.2:+86907040 | MS.gene014948:CDS |
| GAAAGGTTTCAATGGACTGT+TGG | 0.438764 | 3.2:+86906332 | MS.gene014948:CDS |
| GGAGGAGGAGCCCACTCGTC+TGG | 0.438943 | 3.2:-86904329 | None:intergenic |
| AATTTCTCCTTGGGAACAAC+AGG | 0.441899 | 3.2:-86903984 | None:intergenic |
| AAGCTTCTCGAATTTCTCCT+TGG | 0.445814 | 3.2:-86903994 | None:intergenic |
| TAAGATCATTGCATTTGCTT+GGG | 0.448404 | 3.2:+86906128 | MS.gene014948:CDS |
| CTTGGCAACAGTTCACCGTC+AGG | 0.449567 | 3.2:+86905002 | MS.gene014948:CDS |
| CTATTAAAGAGGATGGTCTC+TGG | 0.450216 | 3.2:+86904054 | MS.gene014948:CDS |
| AGAGAGATGTACTTGAAAAC+AGG | 0.450761 | 3.2:-86905478 | None:intergenic |
| GGAGCATATTCCTTGTTTGG+AGG | 0.451980 | 3.2:-86904347 | None:intergenic |
| ACAGCAAATCTATGTCCCTT+TGG | 0.453395 | 3.2:-86906153 | None:intergenic |
| AGCTTCTCGAATTTCTCCTT+GGG | 0.454211 | 3.2:-86903993 | None:intergenic |
| TTCAATATATGGTCTTTCAA+TGG | 0.455846 | 3.2:+86906653 | MS.gene014948:CDS |
| AACCAGCACGAATCACAAAC+TGG | 0.455853 | 3.2:-86904762 | None:intergenic |
| GAAGACTCAAGGATACAAAC+TGG | 0.456776 | 3.2:+86904247 | MS.gene014948:CDS |
| TTTATGCAACTGATGTTGAA+TGG | 0.458529 | 3.2:+86906403 | MS.gene014948:CDS |
| TGTAACTTCAGTTCATGAAA+TGG | 0.459413 | 3.2:+86906622 | MS.gene014948:CDS |
| TGATAAGTACTTTGCAAGGA+TGG | 0.459925 | 3.2:+86905595 | MS.gene014948:CDS |
| CCTTCTACTGAAAAGTCCTT+GGG | 0.460856 | 3.2:+86904089 | MS.gene014948:CDS |
| CCAAACAAGGAATATGCTCC+AGG | 0.464666 | 3.2:+86904350 | MS.gene014948:CDS |
| GTCAAGAAAGAGGCTGGTCT+GGG | 0.472650 | 3.2:-86907029 | None:intergenic |
| TTTGTACAATGGTCACCTTT+GGG | 0.473131 | 3.2:+86904973 | MS.gene014948:CDS |
| CATGCGTTACGCACATCCTC+AGG | 0.475971 | 3.2:+86905065 | MS.gene014948:CDS |
| GGAGGTACTGGAGGTGTCAC+TGG | 0.476252 | 3.2:+86905445 | MS.gene014948:CDS |
| TGAAAGAAGATTGGGACAAG+TGG | 0.476327 | 3.2:+86907171 | MS.gene014948:CDS |
| CATTGAAGTTGAGGAAATAG+TGG | 0.477980 | 3.2:+86907295 | MS.gene014948:CDS |
| TGCATTTGCTTGGGAGCCAA+AGG | 0.480773 | 3.2:+86906137 | MS.gene014948:CDS |
| AAAATATAATGGATTTCAGC+TGG | 0.484915 | 3.2:+86905687 | MS.gene014948:CDS |
| GAGTAGTGAGCTTTGAAACT+CGG | 0.485051 | 3.2:-86906242 | None:intergenic |
| GCTAATACTCCTCAACTTGA+AGG | 0.487202 | 3.2:-86907334 | None:intergenic |
| CAAAGGAAAATCTGCAACAA+TGG | 0.488176 | 3.2:+86904716 | MS.gene014948:intron |
| AAACAGAAATTTACCCTAGC+AGG | 0.488817 | 3.2:-86905767 | None:intergenic |
| GGGACAAGTGGGCCAATGAA+TGG | 0.489541 | 3.2:+86907183 | MS.gene014948:CDS |
| AGAAGCTAGTGATGAGGAAG+AGG | 0.489836 | 3.2:+86907256 | MS.gene014948:CDS |
| TTATGCAACTGATGTTGAAT+GGG | 0.491113 | 3.2:+86906404 | MS.gene014948:CDS |
| TGGTTACCACCTCCTGTCTC+AGG | 0.491207 | 3.2:-86905743 | None:intergenic |
| GTAGGGTCTTGAAAGAAGAT+TGG | 0.493073 | 3.2:+86907162 | MS.gene014948:CDS |
| GCATATTCCTTGTTTGGAGG+AGG | 0.495988 | 3.2:-86904344 | None:intergenic |
| ATGAAGAAGAGAAGCTAGAG+AGG | 0.497330 | 3.2:+86907216 | MS.gene014948:CDS |
| AGATACTAATATCAGGCTTA+GGG | 0.497798 | 3.2:-86906191 | None:intergenic |
| GACCAGTTTGTGATTCGTGC+TGG | 0.499072 | 3.2:+86904760 | MS.gene014948:CDS |
| GCAGGATTGAAAGGTTTCAA+TGG | 0.500217 | 3.2:+86906324 | MS.gene014948:CDS |
| AGGATTCCGCAGTTGTCACC+TGG | 0.502357 | 3.2:-86903793 | None:intergenic |
| GCACGTTTATAAACAGGGTC+GGG | 0.503903 | 3.2:-86904826 | None:intergenic |
| GAGGTGGTAACCAGCCTGCT+AGG | 0.506612 | 3.2:+86905753 | MS.gene014948:CDS |
| TTAGCATCTCGAGGATTGCT+TGG | 0.508363 | 3.2:-86905264 | None:intergenic |
| TAGGGTCTTGAAAGAAGATT+GGG | 0.508845 | 3.2:+86907163 | MS.gene014948:CDS |
| AACAAGAGCGTGAGAAGCGT+AGG | 0.510887 | 3.2:+86907144 | MS.gene014948:CDS |
| GGAACAAACAATGAAATGAT+GGG | 0.513266 | 3.2:-86905722 | None:intergenic |
| GATTCCATTCACCTTCCTCC+AGG | 0.514429 | 3.2:+86903775 | MS.gene014948:CDS |
| GGTCGCTTCATTGTACTAGC+AGG | 0.518685 | 3.2:+86906306 | MS.gene014948:CDS |
| GATGTTGAATGGGATCCAAC+TGG | 0.519724 | 3.2:+86906414 | MS.gene014948:CDS |
| CACTACTCTGAAAGGCAAGC+AGG | 0.520325 | 3.2:+86906257 | MS.gene014948:CDS |
| GCCTGAGTTCTTCTTTGCTG+GGG | 0.521347 | 3.2:-86905924 | None:intergenic |
| CATACTCACAGAAAATATAT+GGG | 0.522843 | 3.2:-86904276 | None:intergenic |
| TCAGCAGCAATGAAACATCT+TGG | 0.522882 | 3.2:-86907118 | None:intergenic |
| GTCACCTGGAGGAAGGTGAA+TGG | 0.523301 | 3.2:-86903779 | None:intergenic |
| TTTGTTCCTGAGACAGGAGG+TGG | 0.523334 | 3.2:+86905737 | MS.gene014948:CDS |
| GTGACAACTGCGGAATCCTC+AGG | 0.526265 | 3.2:+86903797 | MS.gene014948:CDS |
| ATTTGGCAATATTATTGTAG+TGG | 0.528989 | 3.2:+86903953 | MS.gene014948:CDS |
| ATGCGGACGGCTCAGAACAC+TGG | 0.531191 | 3.2:+86906219 | MS.gene014948:CDS |
| CTTCTCAGCAGTCAAGAAAG+AGG | 0.535616 | 3.2:-86907039 | None:intergenic |
| CAAAGAGATCCTTCAAGTTG+AGG | 0.540194 | 3.2:+86907325 | MS.gene014948:CDS |
| CGCAGTTGTCACCTGGAGGA+AGG | 0.540787 | 3.2:-86903786 | None:intergenic |
| AATGGAATCGAGATCGATAG+AGG | 0.542175 | 3.2:-86903761 | None:intergenic |
| ATTGTACTAGCAGGATTGAA+AGG | 0.547734 | 3.2:+86906315 | MS.gene014948:CDS |
| TAGATAATATACCTTCCAGT+TGG | 0.547750 | 3.2:-86906429 | None:intergenic |
| TCAGCAGTCAAGAAAGAGGC+TGG | 0.549593 | 3.2:-86907035 | None:intergenic |
| AGCACGTTTATAAACAGGGT+CGG | 0.550976 | 3.2:-86904827 | None:intergenic |
| ACAAAGAAAAGCACATTCAC+AGG | 0.551860 | 3.2:+86906036 | MS.gene014948:CDS |
| CATTGAGTACAATACTCCTC+AGG | 0.551994 | 3.2:+86904121 | MS.gene014948:CDS |
| GCATTTGCTTGGGAGCCAAA+GGG | 0.553319 | 3.2:+86906138 | MS.gene014948:CDS |
| AGCCAAGGACATTGAAGTTG+AGG | 0.555326 | 3.2:+86907286 | MS.gene014948:CDS |
| TAATCTACCTGTTGTTCCCA+AGG | 0.563226 | 3.2:+86903977 | MS.gene014948:CDS |
| AACATATTTGATGTGAGGAC+TGG | 0.564013 | 3.2:+86905376 | MS.gene014948:CDS |
| ACATCTTTATCGGATATTGA+AGG | 0.564648 | 3.2:+86906679 | MS.gene014948:CDS |
| TTTCTTGACTGCTGAGAAGG+AGG | 0.564955 | 3.2:+86907043 | MS.gene014948:CDS |
| TCAGTGACTGCAAGATGTAC+TGG | 0.566940 | 3.2:+86905965 | MS.gene014948:CDS |
| AGCTAGAGAGGGAAAATCTG+AGG | 0.568066 | 3.2:+86907228 | MS.gene014948:CDS |
| AGTACAATGAAGCGACCTGC+TGG | 0.569021 | 3.2:-86906300 | None:intergenic |
| AAAATGTTCAGTATTAGCCA+TGG | 0.570734 | 3.2:-86906382 | None:intergenic |
| TCAGATTGGTGCTATTAAAG+AGG | 0.572204 | 3.2:+86904043 | MS.gene014948:CDS |
| ACAATGGCTTACTGATGCTA+AGG | 0.574787 | 3.2:+86904732 | MS.gene014948:CDS |
| TTGTTTGTTCCTGAGACAGG+AGG | 0.576213 | 3.2:+86905734 | MS.gene014948:CDS |
| GATAAGTACTTTGCAAGGAT+GGG | 0.579491 | 3.2:+86905596 | MS.gene014948:CDS |
| TCAAAGCTCACTACTCTGAA+AGG | 0.580014 | 3.2:+86906249 | MS.gene014948:CDS |
| ATTGGTGCTATTAAAGAGGA+TGG | 0.581702 | 3.2:+86904047 | MS.gene014948:CDS |
| TTGGCAACAGTTCACCGTCA+GGG | 0.582074 | 3.2:+86905003 | MS.gene014948:CDS |
| GTAACGCATGAGACGATTGA+AGG | 0.583285 | 3.2:-86905052 | None:intergenic |
| AGAAATTTACCCTAGCAGGC+TGG | 0.583948 | 3.2:-86905763 | None:intergenic |
| CATGAAAGTGCCAGACGAGT+GGG | 0.584342 | 3.2:+86904319 | MS.gene014948:CDS |
| GTGGGCTCCTCCTCCAAACA+AGG | 0.584356 | 3.2:+86904337 | MS.gene014948:CDS |
| AATGAAATGATGGGATCAGT+TGG | 0.584945 | 3.2:-86905713 | None:intergenic |
| TCCCCAGCAAAGAAGAACTC+AGG | 0.587881 | 3.2:+86905923 | MS.gene014948:CDS |
| TGACGATGATGTTATTCAAG+AGG | 0.592706 | 3.2:+86903908 | MS.gene014948:CDS |
| GAGGTGTCACTGGAGTGTCA+TGG | 0.597067 | 3.2:+86905455 | MS.gene014948:CDS |
| TCATGAAAGTGCCAGACGAG+TGG | 0.602382 | 3.2:+86904318 | MS.gene014948:CDS |
| AGGTGGTAACCAGCCTGCTA+GGG | 0.602403 | 3.2:+86905754 | MS.gene014948:CDS |
| AAGATGATAAGTACTTTGCA+AGG | 0.602451 | 3.2:+86905591 | MS.gene014948:CDS |
| TTTGCTATCGGAGGTACTGG+AGG | 0.604919 | 3.2:+86905436 | MS.gene014948:CDS |
| GAAAGAAGATTGGGACAAGT+GGG | 0.605311 | 3.2:+86907172 | MS.gene014948:CDS |
| TTTCTTTGCAGATGGAGTGG+TGG | 0.605394 | 3.2:+86905566 | MS.gene014948:intron |
| GGAAGAGGAATATGAAGCCA+AGG | 0.609071 | 3.2:+86907271 | MS.gene014948:CDS |
| CTTGCTAAAGAGAAGACTCA+AGG | 0.612535 | 3.2:+86904236 | MS.gene014948:CDS |
| CAAACAAGGAATATGCTCCA+GGG | 0.614249 | 3.2:+86904351 | MS.gene014948:CDS |
| GAGAGGGAAAATCTGAGGGA+CGG | 0.615059 | 3.2:+86907233 | MS.gene014948:CDS |
| TCGTGCTGGTTCAGATACTG+AGG | 0.620611 | 3.2:+86904774 | MS.gene014948:CDS |
| AACGATCAACATTAACAGCA+AGG | 0.625990 | 3.2:-86906005 | None:intergenic |
| GGACGGAGAAGCTAGTGATG+AGG | 0.627430 | 3.2:+86907250 | MS.gene014948:CDS |
| GTTACCAAATACTTCTCACC+AGG | 0.628866 | 3.2:-86905225 | None:intergenic |
| TGGCAACAGTTCACCGTCAG+GGG | 0.629158 | 3.2:+86905004 | MS.gene014948:CDS |
| GCTAGAGAGGGAAAATCTGA+GGG | 0.630478 | 3.2:+86907229 | MS.gene014948:CDS |
| AAGATGTACTGGCAGAGCAA+TGG | 0.630702 | 3.2:+86905976 | MS.gene014948:CDS |
| TAGTATCTACTCTATGCGGA+CGG | 0.640265 | 3.2:+86906206 | MS.gene014948:CDS |
| CTCAATGAAGCAGTAACCCA+AGG | 0.644342 | 3.2:-86904105 | None:intergenic |
| GGCAACAGTTCACCGTCAGG+GGG | 0.645973 | 3.2:+86905005 | MS.gene014948:CDS |
| TTGAATGGGATCCAACTGGA+AGG | 0.646444 | 3.2:+86906418 | MS.gene014948:CDS |
| ACAAGAGCGTGAGAAGCGTA+GGG | 0.657658 | 3.2:+86907145 | MS.gene014948:CDS |
| AAACAAGGAATATGCTCCAG+GGG | 0.658157 | 3.2:+86904352 | MS.gene014948:CDS |
| TGATAAACATATTTGATGTG+AGG | 0.659557 | 3.2:+86905371 | MS.gene014948:CDS |
| TGTTGATGAGCTTGAAACCA+TGG | 0.663924 | 3.2:+86906365 | MS.gene014948:CDS |
| TGAAGAAGAGAAGCTAGAGA+GGG | 0.666164 | 3.2:+86907217 | MS.gene014948:CDS |
| ACACTCACATTAGCATCTCG+AGG | 0.667806 | 3.2:-86905273 | None:intergenic |
| TTACAGCACGTTTATAAACA+GGG | 0.671673 | 3.2:-86904831 | None:intergenic |
| ACGCATGAGACGATTGAAGG+TGG | 0.677518 | 3.2:-86905049 | None:intergenic |
| CTTCCTCCAGGTGACAACTG+CGG | 0.689197 | 3.2:+86903787 | MS.gene014948:CDS |
| ATTCCGCAGTTGTCACCTGG+AGG | 0.690949 | 3.2:-86903790 | None:intergenic |
| GTTGCCAAGTAAGTACCCAA+AGG | 0.691070 | 3.2:-86904988 | None:intergenic |
| ATATTAGTATCTACTCTATG+CGG | 0.708759 | 3.2:+86906202 | MS.gene014948:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTTAATATCTTTTACT+TGG | + | chr3.2:86904650-86904669 | MS.gene014948:intron | 10.0% |
| !! | TTCAATATATATAGTTCTTA+TGG | + | chr3.2:86907003-86907022 | MS.gene014948:intron | 15.0% |
| !! | TTTGGTATAAAATTAACAAA+AGG | - | chr3.2:86904448-86904467 | None:intergenic | 15.0% |
| !!! | ATTTTATACCAAAAACAAAT+AGG | + | chr3.2:86904455-86904474 | MS.gene014948:intron | 15.0% |
| !!! | TATTTTTTGAATTACAGTTT+TGG | + | chr3.2:86904941-86904960 | MS.gene014948:intron | 15.0% |
| !! | AAAAAATATGACAACCATAA+AGG | - | chr3.2:86904929-86904948 | None:intergenic | 20.0% |
| !! | AAAAATATGACAACCATAAA+GGG | - | chr3.2:86904928-86904947 | None:intergenic | 20.0% |
| !! | AAAGAAAAAAAAAAAACCTG+AGG | - | chr3.2:86905084-86905103 | None:intergenic | 20.0% |
| !! | AATCATAAAATCTGAAAGTA+TGG | - | chr3.2:86903857-86903876 | None:intergenic | 20.0% |
| !! | AGAAAAATTTATAGTCAGAT+TGG | + | chr3.2:86904029-86904048 | MS.gene014948:CDS | 20.0% |
| !! | AGTATATGAATATAAATCTC+AGG | + | chr3.2:86905182-86905201 | MS.gene014948:intron | 20.0% |
| !! | ATCATATTTGTAATTCTACA+AGG | - | chr3.2:86904564-86904583 | None:intergenic | 20.0% |
| !! | ATTAAGAGATTAATGATCAA+AGG | - | chr3.2:86904905-86904924 | None:intergenic | 20.0% |
| !! | TGTAGAATTACAAATATGAT+TGG | + | chr3.2:86904564-86904583 | MS.gene014948:intron | 20.0% |
| !! | TTAAGAGATTAATGATCAAA+GGG | - | chr3.2:86904904-86904923 | None:intergenic | 20.0% |
| !! | TTTGAAGGTTGAAAATATAA+TGG | + | chr3.2:86905676-86905695 | MS.gene014948:CDS | 20.0% |
| !!! | AAATATTGTACAGCAATTTT+TGG | - | chr3.2:86906958-86906977 | None:intergenic | 20.0% |
| !!! | ATGGTTATAGTTTTTTTACA+TGG | + | chr3.2:86906801-86906820 | MS.gene014948:intron | 20.0% |
| !!! | GTAAATAGATACTCTTTTTT+AGG | + | chr3.2:86904143-86904162 | MS.gene014948:intron | 20.0% |
| !!! | TGGTTATAGTTTTTTTACAT+GGG | + | chr3.2:86906802-86906821 | MS.gene014948:intron | 20.0% |
| !!! | TGTATTATTTGATGTTTTCT+AGG | + | chr3.2:86904877-86904896 | MS.gene014948:intron | 20.0% |
| !!! | TTTTTAATTTCTGTTCTTGA+TGG | + | chr3.2:86905876-86905895 | MS.gene014948:intron | 20.0% |
| ! | AAGTCAACATTTAATAGCTA+CGG | - | chr3.2:86906535-86906554 | None:intergenic | 25.0% |
| ! | AATAAATACATACACACATG+AGG | - | chr3.2:86905854-86905873 | None:intergenic | 25.0% |
| ! | AATCACTATGTTCTTAAATC+TGG | + | chr3.2:86904613-86904632 | MS.gene014948:intron | 25.0% |
| ! | ACATACTCACAGAAAATATA+TGG | - | chr3.2:86904280-86904299 | None:intergenic | 25.0% |
| ! | ATAGAGTAGATACTAATATC+AGG | - | chr3.2:86906201-86906220 | None:intergenic | 25.0% |
| ! | ATATTAGTATCTACTCTATG+CGG | + | chr3.2:86906202-86906221 | MS.gene014948:CDS | 25.0% |
| ! | ATGCAAATTCATCACTAAAT+TGG | - | chr3.2:86905543-86905562 | None:intergenic | 25.0% |
| ! | ATGGATAACCAATATAAACA+TGG | - | chr3.2:86906575-86906594 | None:intergenic | 25.0% |
| ! | ATTTGGCAATATTATTGTAG+TGG | + | chr3.2:86903953-86903972 | MS.gene014948:CDS | 25.0% |
| ! | CATACTCACAGAAAATATAT+GGG | - | chr3.2:86904279-86904298 | None:intergenic | 25.0% |
| ! | CTATGTTTAGTGATTCTTAA+TGG | + | chr3.2:86904680-86904699 | MS.gene014948:intron | 25.0% |
| ! | GTAGTTAGATACTTAGATTA+AGG | + | chr3.2:86904509-86904528 | MS.gene014948:intron | 25.0% |
| ! | TAAGAATCACTAAACATAGA+AGG | - | chr3.2:86904679-86904698 | None:intergenic | 25.0% |
| ! | TGATAAACATATTTGATGTG+AGG | + | chr3.2:86905371-86905390 | MS.gene014948:CDS | 25.0% |
| ! | TGGATAACCAATATAAACAT+GGG | - | chr3.2:86906574-86906593 | None:intergenic | 25.0% |
| ! | TTAATCTCTTAATCCCTTTA+TGG | + | chr3.2:86904912-86904931 | MS.gene014948:intron | 25.0% |
| ! | TTAGTAAAGCTACTGAAAAA+AGG | - | chr3.2:86906913-86906932 | None:intergenic | 25.0% |
| ! | TTCAATATATGGTCTTTCAA+TGG | + | chr3.2:86906653-86906672 | MS.gene014948:CDS | 25.0% |
| ! | TTGGATGTACAATGTTTATA+TGG | + | chr3.2:86906782-86906801 | MS.gene014948:intron | 25.0% |
| !! | AAAGTGATGAGAGATTTTAA+GGG | + | chr3.2:86905400-86905419 | MS.gene014948:CDS | 25.0% |
| !! | ATTTTATCCGTGTATTACAA+TGG | + | chr3.2:86906744-86906763 | MS.gene014948:intron | 25.0% |
| !! | TAAAGTGATGAGAGATTTTA+AGG | + | chr3.2:86905399-86905418 | MS.gene014948:CDS | 25.0% |
| !! | TGGAAAATGGATTCAATATA+TGG | + | chr3.2:86906642-86906661 | MS.gene014948:CDS | 25.0% |
| !!! | AAAATATAATGGATTTCAGC+TGG | + | chr3.2:86905687-86905706 | MS.gene014948:CDS | 25.0% |
| !!! | ACAAATATGATTGGTTTACT+TGG | + | chr3.2:86904573-86904592 | MS.gene014948:intron | 25.0% |
| !!! | TAAATTGCAATGGCTATTTT+AGG | + | chr3.2:86904205-86904224 | MS.gene014948:intron | 25.0% |
| !!! | TTCAATGTTTGTTTTACCAT+CGG | + | chr3.2:86904171-86904190 | MS.gene014948:intron | 25.0% |
| !!! | TTTTGAATTACAGTTTTGGA+CGG | + | chr3.2:86904945-86904964 | MS.gene014948:intron | 25.0% |
| AAAATGTTCAGTATTAGCCA+TGG | - | chr3.2:86906385-86906404 | None:intergenic | 30.0% | |
| AACATACCTGTCGTATAAAA+TGG | - | chr3.2:86906594-86906613 | None:intergenic | 30.0% | |
| AAGATGATAAGTACTTTGCA+AGG | + | chr3.2:86905591-86905610 | MS.gene014948:CDS | 30.0% | |
| AAGCAATATCAACACACATT+TGG | - | chr3.2:86906456-86906475 | None:intergenic | 30.0% | |
| ACATCTTTATCGGATATTGA+AGG | + | chr3.2:86906679-86906698 | MS.gene014948:CDS | 30.0% | |
| AGAGAAAGAATGTTGTAGTT+AGG | - | chr3.2:86905342-86905361 | None:intergenic | 30.0% | |
| AGATACTAATATCAGGCTTA+GGG | - | chr3.2:86906194-86906213 | None:intergenic | 30.0% | |
| AGGAACAAACAATGAAATGA+TGG | - | chr3.2:86905726-86905745 | None:intergenic | 30.0% | |
| ATAAGATCATTGCATTTGCT+TGG | + | chr3.2:86906127-86906146 | MS.gene014948:CDS | 30.0% | |
| ATTTCACGAAAAGCTCAAAA+TGG | - | chr3.2:86905315-86905334 | None:intergenic | 30.0% | |
| CGTTGACAAAAAATCTTTGA+AGG | + | chr3.2:86905661-86905680 | MS.gene014948:CDS | 30.0% | |
| GGAACAAACAATGAAATGAT+GGG | - | chr3.2:86905725-86905744 | None:intergenic | 30.0% | |
| GGATAACCAATATAAACATG+GGG | - | chr3.2:86906573-86906592 | None:intergenic | 30.0% | |
| TAAGATCATTGCATTTGCTT+GGG | + | chr3.2:86906128-86906147 | MS.gene014948:CDS | 30.0% | |
| TACAACATTCTTTCTCTAGA+GGG | + | chr3.2:86905345-86905364 | MS.gene014948:intron | 30.0% | |
| TACATCCAAAAGTCATTCTT+TGG | - | chr3.2:86906771-86906790 | None:intergenic | 30.0% | |
| TAGATAATATACCTTCCAGT+TGG | - | chr3.2:86906432-86906451 | None:intergenic | 30.0% | |
| TAGATACTAATATCAGGCTT+AGG | - | chr3.2:86906195-86906214 | None:intergenic | 30.0% | |
| TCAATGGCAAACATCTTTAT+CGG | + | chr3.2:86906669-86906688 | MS.gene014948:CDS | 30.0% | |
| TCAGTTCATGAAATGGAAAA+TGG | + | chr3.2:86906629-86906648 | MS.gene014948:CDS | 30.0% | |
| TGTAACTTCAGTTCATGAAA+TGG | + | chr3.2:86906622-86906641 | MS.gene014948:CDS | 30.0% | |
| TTACAGCACGTTTATAAACA+GGG | - | chr3.2:86904834-86904853 | None:intergenic | 30.0% | |
| TTATGCAACTGATGTTGAAT+GGG | + | chr3.2:86906404-86906423 | MS.gene014948:CDS | 30.0% | |
| TTGATGAGGTTAAATTGCAA+TGG | + | chr3.2:86904195-86904214 | MS.gene014948:intron | 30.0% | |
| TTTATGCAACTGATGTTGAA+TGG | + | chr3.2:86906403-86906422 | MS.gene014948:CDS | 30.0% | |
| ! | AAAACTTTTACAGCCAACAA+TGG | - | chr3.2:86906837-86906856 | None:intergenic | 30.0% |
| ! | ATGGTCTTTATTTCTCTCAA+AGG | + | chr3.2:86904699-86904718 | MS.gene014948:intron | 30.0% |
| !! | AAAAAAGGCTTTTGGAAACA+AGG | - | chr3.2:86906898-86906917 | None:intergenic | 30.0% |
| !! | AAAAAGGCTTTTGGAAACAA+GGG | - | chr3.2:86906897-86906916 | None:intergenic | 30.0% |
| !! | AAAGAGTATCTATTTACCTG+AGG | - | chr3.2:86904140-86904159 | None:intergenic | 30.0% |
| !! | AGCATTGATTAATATACCTG+AGG | - | chr3.2:86903816-86903835 | None:intergenic | 30.0% |
| !! | CATAGATTTGCTGTTATTCA+TGG | + | chr3.2:86906162-86906181 | MS.gene014948:CDS | 30.0% |
| !!! | AAGCTTATTGATTTTTCACC+TGG | + | chr3.2:86905207-86905226 | MS.gene014948:CDS | 30.0% |
| !!! | TACAGCAATTTTTGGTTTGT+GGG | - | chr3.2:86906950-86906969 | None:intergenic | 30.0% |
| !!! | TGCATTTTTTTCTTTGCAGA+TGG | + | chr3.2:86905558-86905577 | MS.gene014948:intron | 30.0% |
| AAACAGAAATTTACCCTAGC+AGG | - | chr3.2:86905770-86905789 | None:intergenic | 35.0% | |
| AACATAGTGATTGAACGTTG+GGG | - | chr3.2:86904605-86904624 | None:intergenic | 35.0% | |
| AACATATTTGATGTGAGGAC+TGG | + | chr3.2:86905376-86905395 | MS.gene014948:CDS | 35.0% | |
| AACGATCAACATTAACAGCA+AGG | - | chr3.2:86906008-86906027 | None:intergenic | 35.0% | |
| ACTGATCCCCATGTTTATAT+TGG | + | chr3.2:86906564-86906583 | MS.gene014948:intron | 35.0% | |
| AGAACATAGTGATTGAACGT+TGG | - | chr3.2:86904607-86904626 | None:intergenic | 35.0% | |
| AGACCACCATATTAGGATTA+TGG | + | chr3.2:86904418-86904437 | MS.gene014948:intron | 35.0% | |
| AGAGAGATGTACTTGAAAAC+AGG | - | chr3.2:86905481-86905500 | None:intergenic | 35.0% | |
| AGAGATATAATCATTACCCC+TGG | - | chr3.2:86904371-86904390 | None:intergenic | 35.0% | |
| ATTGAAGGATCACTTCTTTC+AGG | + | chr3.2:86906694-86906713 | MS.gene014948:CDS | 35.0% | |
| ATTGTACTAGCAGGATTGAA+AGG | + | chr3.2:86906315-86906334 | MS.gene014948:CDS | 35.0% | |
| ATTTAACCTCATCAAACCGA+TGG | - | chr3.2:86904190-86904209 | None:intergenic | 35.0% | |
| CAAAGGAAAATCTGCAACAA+TGG | + | chr3.2:86904716-86904735 | MS.gene014948:intron | 35.0% | |
| CATTACACATGACCATAGAA+GGG | - | chr3.2:86905798-86905817 | None:intergenic | 35.0% | |
| CATTGAAGTTGAGGAAATAG+TGG | + | chr3.2:86907295-86907314 | MS.gene014948:CDS | 35.0% | |
| CTACAACATTCTTTCTCTAG+AGG | + | chr3.2:86905344-86905363 | MS.gene014948:intron | 35.0% | |
| CTTACAGCACGTTTATAAAC+AGG | - | chr3.2:86904835-86904854 | None:intergenic | 35.0% | |
| CTTTGGACCATTGTAATACA+CGG | - | chr3.2:86906754-86906773 | None:intergenic | 35.0% | |
| GAACATAGTGATTGAACGTT+GGG | - | chr3.2:86904606-86904625 | None:intergenic | 35.0% | |
| GACCACCATATTAGGATTAT+GGG | + | chr3.2:86904419-86904438 | MS.gene014948:intron | 35.0% | |
| GATAAGTACTTTGCAAGGAT+GGG | + | chr3.2:86905596-86905615 | MS.gene014948:CDS | 35.0% | |
| GTATGTCACGTTCCTTTATA+CGG | - | chr3.2:86906074-86906093 | None:intergenic | 35.0% | |
| TAGGGTCTTGAAAGAAGATT+GGG | + | chr3.2:86907163-86907182 | MS.gene014948:CDS | 35.0% | |
| TGACATACCTATTGAAGTTC+TGG | + | chr3.2:86906086-86906105 | MS.gene014948:CDS | 35.0% | |
| TGACGATGATGTTATTCAAG+AGG | + | chr3.2:86903908-86903927 | MS.gene014948:CDS | 35.0% | |
| TGATAAGTACTTTGCAAGGA+TGG | + | chr3.2:86905595-86905614 | MS.gene014948:CDS | 35.0% | |
| TGTTATTCAAGAGGAGAATC+TGG | + | chr3.2:86903917-86903936 | MS.gene014948:CDS | 35.0% | |
| TTATCCATGATCTTCAACCT+TGG | - | chr3.2:86906480-86906499 | None:intergenic | 35.0% | |
| TTGTAATTCTACAAGGAGTG+TGG | - | chr3.2:86904557-86904576 | None:intergenic | 35.0% | |
| TTTGTACAATGGTCACCTTT+GGG | + | chr3.2:86904973-86904992 | MS.gene014948:CDS | 35.0% | |
| ! | AATGAAATGATGGGATCAGT+TGG | - | chr3.2:86905716-86905735 | None:intergenic | 35.0% |
| ! | ACAAAGAAAAGCACATTCAC+AGG | + | chr3.2:86906036-86906055 | MS.gene014948:CDS | 35.0% |
| ! | AGCTACTGAAAAAAGGCTTT+TGG | - | chr3.2:86906906-86906925 | None:intergenic | 35.0% |
| ! | ATGGTCCAAAGAATGACTTT+TGG | + | chr3.2:86906763-86906782 | MS.gene014948:intron | 35.0% |
| ! | CTTTGAGCTTTTCCGTATAA+AGG | + | chr3.2:86906059-86906078 | MS.gene014948:CDS | 35.0% |
| ! | GAATGTGCTTTTCTTTGTCT+TGG | - | chr3.2:86906034-86906053 | None:intergenic | 35.0% |
| ! | GGCAATTTCATGTTTTCTCA+TGG | + | chr3.2:86904530-86904549 | MS.gene014948:intron | 35.0% |
| ! | GGTTATCCATTTTATACGAC+AGG | + | chr3.2:86906585-86906604 | MS.gene014948:intron | 35.0% |
| ! | TCATTTGAGACCACCATATT+AGG | + | chr3.2:86904411-86904430 | MS.gene014948:intron | 35.0% |
| ! | TGTGTTGATATTGCTTACCA+AGG | + | chr3.2:86906460-86906479 | MS.gene014948:intron | 35.0% |
| ! | TTTTCAGTAGAAGGATCAAC+AGG | - | chr3.2:86904083-86904102 | None:intergenic | 35.0% |
| ! | TTTTGTACAATGGTCACCTT+TGG | + | chr3.2:86904972-86904991 | MS.gene014948:CDS | 35.0% |
| !! | AAGTGGTGCCTATTTGTTTT+TGG | - | chr3.2:86904466-86904485 | None:intergenic | 35.0% |
| !! | ATTGGTGCTATTAAAGAGGA+TGG | + | chr3.2:86904047-86904066 | MS.gene014948:CDS | 35.0% |
| !! | TCAGATTGGTGCTATTAAAG+AGG | + | chr3.2:86904043-86904062 | MS.gene014948:CDS | 35.0% |
| !! | TCTGTTCTTGATGGATTTGT+AGG | + | chr3.2:86905885-86905904 | MS.gene014948:intron | 35.0% |
| !!! | AGTGCTGATGATTTTGCTAT+CGG | + | chr3.2:86905424-86905443 | MS.gene014948:CDS | 35.0% |
| !!! | GTACAGCAATTTTTGGTTTG+TGG | - | chr3.2:86906951-86906970 | None:intergenic | 35.0% |
| !!! | TTTTTTCTTTGCAGATGGAG+TGG | + | chr3.2:86905563-86905582 | MS.gene014948:intron | 35.0% |
| AAACAAGGAATATGCTCCAG+GGG | + | chr3.2:86904352-86904371 | MS.gene014948:CDS | 40.0% | |
| AAGCTTCTCGAATTTCTCCT+TGG | - | chr3.2:86903997-86904016 | None:intergenic | 40.0% | |
| AATGGAATCGAGATCGATAG+AGG | - | chr3.2:86903764-86903783 | None:intergenic | 40.0% | |
| AATTTCTCCTTGGGAACAAC+AGG | - | chr3.2:86903987-86904006 | None:intergenic | 40.0% | |
| ACAATGGCTTACTGATGCTA+AGG | + | chr3.2:86904732-86904751 | MS.gene014948:CDS | 40.0% | |
| ACAGCAAATCTATGTCCCTT+TGG | - | chr3.2:86906156-86906175 | None:intergenic | 40.0% | |
| AGCACGTTTATAAACAGGGT+CGG | - | chr3.2:86904830-86904849 | None:intergenic | 40.0% | |
| AGCTTCTCGAATTTCTCCTT+GGG | - | chr3.2:86903996-86904015 | None:intergenic | 40.0% | |
| ATGAAGAAGAGAAGCTAGAG+AGG | + | chr3.2:86907216-86907235 | MS.gene014948:CDS | 40.0% | |
| ATGCAACAGCTTCCATTCAT+TGG | - | chr3.2:86907198-86907217 | None:intergenic | 40.0% | |
| CAAACAAGGAATATGCTCCA+GGG | + | chr3.2:86904351-86904370 | MS.gene014948:CDS | 40.0% | |
| CATCGTCATCACTACATACA+TGG | - | chr3.2:86903896-86903915 | None:intergenic | 40.0% | |
| CATTGAGTACAATACTCCTC+AGG | + | chr3.2:86904121-86904140 | MS.gene014948:CDS | 40.0% | |
| CCATTACACATGACCATAGA+AGG | - | chr3.2:86905799-86905818 | None:intergenic | 40.0% | |
| CCTTCTACTGAAAAGTCCTT+GGG | + | chr3.2:86904089-86904108 | MS.gene014948:CDS | 40.0% | |
| CCTTCTATGGTCATGTGTAA+TGG | + | chr3.2:86905796-86905815 | MS.gene014948:intron | 40.0% | |
| CTATTAAAGAGGATGGTCTC+TGG | + | chr3.2:86904054-86904073 | MS.gene014948:CDS | 40.0% | |
| CTCAACTTGAAGGATCTCTT+TGG | - | chr3.2:86907327-86907346 | None:intergenic | 40.0% | |
| CTCCCATAATCCTAATATGG+TGG | - | chr3.2:86904424-86904443 | None:intergenic | 40.0% | |
| CTGGAGTTTGATTCTGGATT+TGG | + | chr3.2:86903936-86903955 | MS.gene014948:CDS | 40.0% | |
| CTTACCAAGGTTGAAGATCA+TGG | + | chr3.2:86906473-86906492 | MS.gene014948:intron | 40.0% | |
| CTTGCTAAAGAGAAGACTCA+AGG | + | chr3.2:86904236-86904255 | MS.gene014948:CDS | 40.0% | |
| GAAAGAAGATTGGGACAAGT+GGG | + | chr3.2:86907172-86907191 | MS.gene014948:CDS | 40.0% | |
| GAAGACAAAGCTTTGCTTCT+CGG | + | chr3.2:86903727-86903746 | MS.gene014948:CDS | 40.0% | |
| GAAGACTCAAGGATACAAAC+TGG | + | chr3.2:86904247-86904266 | MS.gene014948:CDS | 40.0% | |
| GCAGGATTGAAAGGTTTCAA+TGG | + | chr3.2:86906324-86906343 | MS.gene014948:CDS | 40.0% | |
| GGTCTCCCATAATCCTAATA+TGG | - | chr3.2:86904427-86904446 | None:intergenic | 40.0% | |
| GTAGGGTCTTGAAAGAAGAT+TGG | + | chr3.2:86907162-86907181 | MS.gene014948:CDS | 40.0% | |
| GTTACCAAATACTTCTCACC+AGG | - | chr3.2:86905228-86905247 | None:intergenic | 40.0% | |
| TAATCTACCTGTTGTTCCCA+AGG | + | chr3.2:86903977-86903996 | MS.gene014948:CDS | 40.0% | |
| TAGTATCTACTCTATGCGGA+CGG | + | chr3.2:86906206-86906225 | MS.gene014948:CDS | 40.0% | |
| TCAAAGCTCACTACTCTGAA+AGG | + | chr3.2:86906249-86906268 | MS.gene014948:CDS | 40.0% | |
| TCAGCAGCAATGAAACATCT+TGG | - | chr3.2:86907121-86907140 | None:intergenic | 40.0% | |
| TCATTGTTTGTTCCTGAGAC+AGG | + | chr3.2:86905731-86905750 | MS.gene014948:CDS | 40.0% | |
| TCCTTCTACTGAAAAGTCCT+TGG | + | chr3.2:86904088-86904107 | MS.gene014948:CDS | 40.0% | |
| TGAAAGAAGATTGGGACAAG+TGG | + | chr3.2:86907171-86907190 | MS.gene014948:CDS | 40.0% | |
| TGAAGAAGAGAAGCTAGAGA+GGG | + | chr3.2:86907217-86907236 | MS.gene014948:CDS | 40.0% | |
| TGGGATTGTGAATCCATTGT+TGG | + | chr3.2:86906821-86906840 | MS.gene014948:intron | 40.0% | |
| TTCCTCAACTTCAATGTCCT+TGG | - | chr3.2:86907291-86907310 | None:intergenic | 40.0% | |
| ! | GAGAATCTGGAGTTTGATTC+TGG | + | chr3.2:86903930-86903949 | MS.gene014948:CDS | 40.0% |
| ! | GTTCAGATACTGAGGTTTTG+TGG | + | chr3.2:86904782-86904801 | MS.gene014948:CDS | 40.0% |
| ! | TCTGTTTTCCTTCCCTTCTA+TGG | + | chr3.2:86905783-86905802 | MS.gene014948:intron | 40.0% |
| ! | TGTTGATGAGCTTGAAACCA+TGG | + | chr3.2:86906365-86906384 | MS.gene014948:CDS | 40.0% |
| !! | CAAAGAGATCCTTCAAGTTG+AGG | + | chr3.2:86907325-86907344 | MS.gene014948:CDS | 40.0% |
| !! | GAAAGGTTTCAATGGACTGT+TGG | + | chr3.2:86906332-86906351 | MS.gene014948:CDS | 40.0% |
| !! | GAGTAGTGAGCTTTGAAACT+CGG | - | chr3.2:86906245-86906264 | None:intergenic | 40.0% |
| !! | TTCACCTGGTGAGAAGTATT+TGG | + | chr3.2:86905221-86905240 | MS.gene014948:CDS | 40.0% |
| !!! | AGCAGGCAAATGCTTTGTTT+TGG | + | chr3.2:86906274-86906293 | MS.gene014948:CDS | 40.0% |
| !!! | GTTTTACCATCGGTTTGATG+AGG | + | chr3.2:86904181-86904200 | MS.gene014948:intron | 40.0% |
| AACCAGCACGAATCACAAAC+TGG | - | chr3.2:86904765-86904784 | None:intergenic | 45.0% | |
| ACACATGACCATAGAAGGGA+AGG | - | chr3.2:86905794-86905813 | None:intergenic | 45.0% | |
| ACACTCACATTAGCATCTCG+AGG | - | chr3.2:86905276-86905295 | None:intergenic | 45.0% | |
| AGAAATTTACCCTAGCAGGC+TGG | - | chr3.2:86905766-86905785 | None:intergenic | 45.0% | |
| AGAAGCTAGTGATGAGGAAG+AGG | + | chr3.2:86907256-86907275 | MS.gene014948:CDS | 45.0% | |
| AGCCAAGGACATTGAAGTTG+AGG | + | chr3.2:86907286-86907305 | MS.gene014948:CDS | 45.0% | |
| AGCTAGAGAGGGAAAATCTG+AGG | + | chr3.2:86907228-86907247 | MS.gene014948:CDS | 45.0% | |
| CCAAACAAGGAATATGCTCC+AGG | + | chr3.2:86904350-86904369 | MS.gene014948:CDS | 45.0% | |
| CCTGGAGCATATTCCTTGTT+TGG | - | chr3.2:86904353-86904372 | None:intergenic | 45.0% | |
| CTCAATGAAGCAGTAACCCA+AGG | - | chr3.2:86904108-86904127 | None:intergenic | 45.0% | |
| CTCTTTCTTGACTGCTGAGA+AGG | + | chr3.2:86907040-86907059 | MS.gene014948:CDS | 45.0% | |
| CTTCTCAGCAGTCAAGAAAG+AGG | - | chr3.2:86907042-86907061 | None:intergenic | 45.0% | |
| GATGTTGAATGGGATCCAAC+TGG | + | chr3.2:86906414-86906433 | MS.gene014948:CDS | 45.0% | |
| GCACGTTTATAAACAGGGTC+GGG | - | chr3.2:86904829-86904848 | None:intergenic | 45.0% | |
| GCTAGAGAGGGAAAATCTGA+GGG | + | chr3.2:86907229-86907248 | MS.gene014948:CDS | 45.0% | |
| GGAAGAGGAATATGAAGCCA+AGG | + | chr3.2:86907271-86907290 | MS.gene014948:CDS | 45.0% | |
| GTAACGCATGAGACGATTGA+AGG | - | chr3.2:86905055-86905074 | None:intergenic | 45.0% | |
| GTCACCTTTGGGTACTTACT+TGG | + | chr3.2:86904984-86905003 | MS.gene014948:CDS | 45.0% | |
| GTTGCCAAGTAAGTACCCAA+AGG | - | chr3.2:86904991-86905010 | None:intergenic | 45.0% | |
| TCAGTGACTGCAAGATGTAC+TGG | + | chr3.2:86905965-86905984 | MS.gene014948:CDS | 45.0% | |
| TCGAGCTCCAGAACTTCAAT+AGG | - | chr3.2:86906096-86906115 | None:intergenic | 45.0% | |
| TGCCTGAGTTCTTCTTTGCT+GGG | - | chr3.2:86905928-86905947 | None:intergenic | 45.0% | |
| TTAGCATCTCGAGGATTGCT+TGG | - | chr3.2:86905267-86905286 | None:intergenic | 45.0% | |
| TTGAATGGGATCCAACTGGA+AGG | + | chr3.2:86906418-86906437 | MS.gene014948:CDS | 45.0% | |
| TTGCCTGAGTTCTTCTTTGC+TGG | - | chr3.2:86905929-86905948 | None:intergenic | 45.0% | |
| TTGTTTGTTCCTGAGACAGG+AGG | + | chr3.2:86905734-86905753 | MS.gene014948:CDS | 45.0% | |
| TTTCTTGACTGCTGAGAAGG+AGG | + | chr3.2:86907043-86907062 | MS.gene014948:CDS | 45.0% | |
| TTTCTTTGCAGATGGAGTGG+TGG | + | chr3.2:86905566-86905585 | MS.gene014948:intron | 45.0% | |
| ! | AAGATGTACTGGCAGAGCAA+TGG | + | chr3.2:86905976-86905995 | MS.gene014948:CDS | 45.0% |
| ! | CCCAAGGACTTTTCAGTAGA+AGG | - | chr3.2:86904092-86904111 | None:intergenic | 45.0% |
| ! | GCATATTCCTTGTTTGGAGG+AGG | - | chr3.2:86904347-86904366 | None:intergenic | 45.0% |
| ! | GGAGCATATTCCTTGTTTGG+AGG | - | chr3.2:86904350-86904369 | None:intergenic | 45.0% |
| !! | GATTTTGCTATCGGAGGTAC+TGG | + | chr3.2:86905433-86905452 | MS.gene014948:CDS | 45.0% |
| !! | GCTGATGATTTTGCTATCGG+AGG | + | chr3.2:86905427-86905446 | MS.gene014948:CDS | 45.0% |
| !! | GGACGGAGAGTTTTGTACAA+TGG | + | chr3.2:86904962-86904981 | MS.gene014948:CDS | 45.0% |
| ACAACCAAGTAGCACGCAAG+TGG | - | chr3.2:86904483-86904502 | None:intergenic | 50.0% | |
| ACGCATGAGACGATTGAAGG+TGG | - | chr3.2:86905052-86905071 | None:intergenic | 50.0% | |
| AGTACAATGAAGCGACCTGC+TGG | - | chr3.2:86906303-86906322 | None:intergenic | 50.0% | |
| CTCGAGGATTGCTTGGTTCA+TGG | - | chr3.2:86905260-86905279 | None:intergenic | 50.0% | |
| GACCAGTTTGTGATTCGTGC+TGG | + | chr3.2:86904760-86904779 | MS.gene014948:CDS | 50.0% | |
| GAGAGGGAAAATCTGAGGGA+CGG | + | chr3.2:86907233-86907252 | MS.gene014948:CDS | 50.0% | |
| GATTCCATTCACCTTCCTCC+AGG | + | chr3.2:86903775-86903794 | MS.gene014948:CDS | 50.0% | |
| GCATTTGCTTGGGAGCCAAA+GGG | + | chr3.2:86906138-86906157 | MS.gene014948:CDS | 50.0% | |
| GCCTGAGTTCTTCTTTGCTG+GGG | - | chr3.2:86905927-86905946 | None:intergenic | 50.0% | |
| GGTCGCTTCATTGTACTAGC+AGG | + | chr3.2:86906306-86906325 | MS.gene014948:CDS | 50.0% | |
| TCAGCAGTCAAGAAAGAGGC+TGG | - | chr3.2:86907038-86907057 | None:intergenic | 50.0% | |
| TCCCCAGCAAAGAAGAACTC+AGG | + | chr3.2:86905923-86905942 | MS.gene014948:CDS | 50.0% | |
| TGCATTTGCTTGGGAGCCAA+AGG | + | chr3.2:86906137-86906156 | MS.gene014948:CDS | 50.0% | |
| TTGGCAACAGTTCACCGTCA+GGG | + | chr3.2:86905003-86905022 | MS.gene014948:CDS | 50.0% | |
| TTTGTTCCTGAGACAGGAGG+TGG | + | chr3.2:86905737-86905756 | MS.gene014948:CDS | 50.0% | |
| ! | AACAAGAGCGTGAGAAGCGT+AGG | + | chr3.2:86907144-86907163 | MS.gene014948:CDS | 50.0% |
| ! | ACAAGAGCGTGAGAAGCGTA+GGG | + | chr3.2:86907145-86907164 | MS.gene014948:CDS | 50.0% |
| ! | AGTCAAGAAAGAGGCTGGTC+TGG | - | chr3.2:86907033-86907052 | None:intergenic | 50.0% |
| ! | CACTACTCTGAAAGGCAAGC+AGG | + | chr3.2:86906257-86906276 | MS.gene014948:CDS | 50.0% |
| !! | CATGAAAGTGCCAGACGAGT+GGG | + | chr3.2:86904319-86904338 | MS.gene014948:CDS | 50.0% |
| !! | GTCAAGAAAGAGGCTGGTCT+GGG | - | chr3.2:86907032-86907051 | None:intergenic | 50.0% |
| !! | TCATGAAAGTGCCAGACGAG+TGG | + | chr3.2:86904318-86904337 | MS.gene014948:CDS | 50.0% |
| !! | TCGTGCTGGTTCAGATACTG+AGG | + | chr3.2:86904774-86904793 | MS.gene014948:CDS | 50.0% |
| !! | TTTGCTATCGGAGGTACTGG+AGG | + | chr3.2:86905436-86905455 | MS.gene014948:CDS | 50.0% |
| !!! | GCTTTGTTTTGGTCACCAGC+AGG | + | chr3.2:86906285-86906304 | MS.gene014948:CDS | 50.0% |
| AGGATTCCGCAGTTGTCACC+TGG | - | chr3.2:86903796-86903815 | None:intergenic | 55.0% | |
| AGGTGGTAACCAGCCTGCTA+GGG | + | chr3.2:86905754-86905773 | MS.gene014948:CDS | 55.0% | |
| ATTCCGCAGTTGTCACCTGG+AGG | - | chr3.2:86903793-86903812 | None:intergenic | 55.0% | |
| CATGCGTTACGCACATCCTC+AGG | + | chr3.2:86905065-86905084 | MS.gene014948:CDS | 55.0% | |
| CTTCCTCCAGGTGACAACTG+CGG | + | chr3.2:86903787-86903806 | MS.gene014948:CDS | 55.0% | |
| CTTGGCAACAGTTCACCGTC+AGG | + | chr3.2:86905002-86905021 | MS.gene014948:CDS | 55.0% | |
| GGACGGAGAAGCTAGTGATG+AGG | + | chr3.2:86907250-86907269 | MS.gene014948:CDS | 55.0% | |
| GGGACAAGTGGGCCAATGAA+TGG | + | chr3.2:86907183-86907202 | MS.gene014948:CDS | 55.0% | |
| GTCACCTGGAGGAAGGTGAA+TGG | - | chr3.2:86903782-86903801 | None:intergenic | 55.0% | |
| GTGACAACTGCGGAATCCTC+AGG | + | chr3.2:86903797-86903816 | MS.gene014948:CDS | 55.0% | |
| TGGCAACAGTTCACCGTCAG+GGG | + | chr3.2:86905004-86905023 | MS.gene014948:CDS | 55.0% | |
| TGGTTACCACCTCCTGTCTC+AGG | - | chr3.2:86905746-86905765 | None:intergenic | 55.0% | |
| !! | GAGGTGTCACTGGAGTGTCA+TGG | + | chr3.2:86905455-86905474 | MS.gene014948:CDS | 55.0% |
| ATGCGGACGGCTCAGAACAC+TGG | + | chr3.2:86906219-86906238 | MS.gene014948:CDS | 60.0% | |
| CGCAGTTGTCACCTGGAGGA+AGG | - | chr3.2:86903789-86903808 | None:intergenic | 60.0% | |
| GAGGTGGTAACCAGCCTGCT+AGG | + | chr3.2:86905753-86905772 | MS.gene014948:CDS | 60.0% | |
| GGCAACAGTTCACCGTCAGG+GGG | + | chr3.2:86905005-86905024 | MS.gene014948:CDS | 60.0% | |
| GTGGGCTCCTCCTCCAAACA+AGG | + | chr3.2:86904337-86904356 | MS.gene014948:CDS | 60.0% | |
| ! | GGCACCACTTGCGTGCTACT+TGG | + | chr3.2:86904476-86904495 | MS.gene014948:intron | 60.0% |
| !! | GGAGGTACTGGAGGTGTCAC+TGG | + | chr3.2:86905445-86905464 | MS.gene014948:CDS | 60.0% |
| ACCGTCAGGGGGCAGCAGTT+TGG | + | chr3.2:86905016-86905035 | MS.gene014948:CDS | 65.0% | |
| CCCAAACTGCTGCCCCCTGA+CGG | - | chr3.2:86905020-86905039 | None:intergenic | 65.0% | |
| CCGTCAGGGGGCAGCAGTTT+GGG | + | chr3.2:86905017-86905036 | MS.gene014948:CDS | 65.0% | |
| CGTCAGGGGGCAGCAGTTTG+GGG | + | chr3.2:86905018-86905037 | MS.gene014948:CDS | 65.0% | |
| CAGGGGGCAGCAGTTTGGGG+AGG | + | chr3.2:86905021-86905040 | MS.gene014948:CDS | 70.0% | |
| GGAGGAGGAGCCCACTCGTC+TGG | - | chr3.2:86904332-86904351 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 86903697 | 86907355 | 86903697 | ID=MS.gene014948 |
| chr3.2 | mRNA | 86903697 | 86907355 | 86903697 | ID=MS.gene014948.t1;Parent=MS.gene014948 |
| chr3.2 | exon | 86903697 | 86903818 | 86903697 | ID=MS.gene014948.t1.exon1;Parent=MS.gene014948.t1 |
| chr3.2 | CDS | 86903697 | 86903818 | 86903697 | ID=cds.MS.gene014948.t1;Parent=MS.gene014948.t1 |
| chr3.2 | exon | 86903905 | 86904142 | 86903905 | ID=MS.gene014948.t1.exon2;Parent=MS.gene014948.t1 |
| chr3.2 | CDS | 86903905 | 86904142 | 86903905 | ID=cds.MS.gene014948.t1;Parent=MS.gene014948.t1 |
| chr3.2 | exon | 86904227 | 86904373 | 86904227 | ID=MS.gene014948.t1.exon3;Parent=MS.gene014948.t1 |
| chr3.2 | CDS | 86904227 | 86904373 | 86904227 | ID=cds.MS.gene014948.t1;Parent=MS.gene014948.t1 |
| chr3.2 | exon | 86904721 | 86904849 | 86904721 | ID=MS.gene014948.t1.exon4;Parent=MS.gene014948.t1 |
| chr3.2 | CDS | 86904721 | 86904849 | 86904721 | ID=cds.MS.gene014948.t1;Parent=MS.gene014948.t1 |
| chr3.2 | exon | 86904958 | 86905086 | 86904958 | ID=MS.gene014948.t1.exon5;Parent=MS.gene014948.t1 |
| chr3.2 | CDS | 86904958 | 86905086 | 86904958 | ID=cds.MS.gene014948.t1;Parent=MS.gene014948.t1 |
| chr3.2 | exon | 86905204 | 86905287 | 86905204 | ID=MS.gene014948.t1.exon6;Parent=MS.gene014948.t1 |
| chr3.2 | CDS | 86905204 | 86905287 | 86905204 | ID=cds.MS.gene014948.t1;Parent=MS.gene014948.t1 |
| chr3.2 | exon | 86905364 | 86905488 | 86905364 | ID=MS.gene014948.t1.exon7;Parent=MS.gene014948.t1 |
| chr3.2 | CDS | 86905364 | 86905488 | 86905364 | ID=cds.MS.gene014948.t1;Parent=MS.gene014948.t1 |
| chr3.2 | exon | 86905577 | 86905775 | 86905577 | ID=MS.gene014948.t1.exon8;Parent=MS.gene014948.t1 |
| chr3.2 | CDS | 86905577 | 86905775 | 86905577 | ID=cds.MS.gene014948.t1;Parent=MS.gene014948.t1 |
| chr3.2 | exon | 86905907 | 86906439 | 86905907 | ID=MS.gene014948.t1.exon9;Parent=MS.gene014948.t1 |
| chr3.2 | CDS | 86905907 | 86906439 | 86905907 | ID=cds.MS.gene014948.t1;Parent=MS.gene014948.t1 |
| chr3.2 | exon | 86906607 | 86906715 | 86906607 | ID=MS.gene014948.t1.exon10;Parent=MS.gene014948.t1 |
| chr3.2 | CDS | 86906607 | 86906715 | 86906607 | ID=cds.MS.gene014948.t1;Parent=MS.gene014948.t1 |
| chr3.2 | exon | 86907017 | 86907355 | 86907017 | ID=MS.gene014948.t1.exon11;Parent=MS.gene014948.t1 |
| chr3.2 | CDS | 86907017 | 86907355 | 86907017 | ID=cds.MS.gene014948.t1;Parent=MS.gene014948.t1 |
| Gene Sequence |
| Protein sequence |
