Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32742.t1 | XP_003603240.2 | 99 | 717 | 6 | 1 | 1 | 717 | 1 | 716 | 0.00E+00 | 1437.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32742.t1 | P56821 | 78.1 | 718 | 153 | 3 | 1 | 716 | 1 | 716 | 0.0e+00 | 1146.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32742.t1 | G7J950 | 99.0 | 717 | 6 | 1 | 1 | 717 | 1 | 716 | 0.0e+00 | 1437.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene32742 | 0.806583 | 7.67E-50 | -1.69E-46 |
| MS.gene049807 | MS.gene32742 | 0.814279 | 1.67E-51 | -1.69E-46 |
| MS.gene049887 | MS.gene32742 | 0.812579 | 3.95E-51 | -1.69E-46 |
| MS.gene050551 | MS.gene32742 | 0.833737 | 4.49E-56 | -1.69E-46 |
| MS.gene050838 | MS.gene32742 | 0.845327 | 4.35E-59 | -1.69E-46 |
| MS.gene051102 | MS.gene32742 | 0.820803 | 5.65E-53 | -1.69E-46 |
| MS.gene051234 | MS.gene32742 | 0.803487 | 3.41E-49 | -1.69E-46 |
| MS.gene051381 | MS.gene32742 | 0.81965 | 1.04E-52 | -1.69E-46 |
| MS.gene051642 | MS.gene32742 | 0.808151 | 3.57E-50 | -1.69E-46 |
| MS.gene051885 | MS.gene32742 | 0.826908 | 2.10E-54 | -1.69E-46 |
| MS.gene052307 | MS.gene32742 | 0.837536 | 4.90E-57 | -1.69E-46 |
| MS.gene052373 | MS.gene32742 | 0.808 | 3.84E-50 | -1.69E-46 |
| MS.gene052609 | MS.gene32742 | 0.882998 | 6.51E-71 | -1.69E-46 |
| MS.gene052732 | MS.gene32742 | 0.804916 | 1.72E-49 | -1.69E-46 |
| MS.gene053143 | MS.gene32742 | 0.877648 | 5.31E-69 | -1.69E-46 |
| MS.gene053144 | MS.gene32742 | 0.813071 | 3.08E-51 | -1.69E-46 |
| MS.gene05315 | MS.gene32742 | 0.809495 | 1.84E-50 | -1.69E-46 |
| MS.gene054584 | MS.gene32742 | 0.816391 | 5.66E-52 | -1.69E-46 |
| MS.gene054585 | MS.gene32742 | 0.834713 | 2.56E-56 | -1.69E-46 |
| MS.gene054824 | MS.gene32742 | 0.852104 | 5.74E-61 | -1.69E-46 |
| MS.gene055469 | MS.gene32742 | 0.85958 | 3.75E-63 | -1.69E-46 |
| MS.gene055513 | MS.gene32742 | 0.839074 | 1.97E-57 | -1.69E-46 |
| MS.gene055975 | MS.gene32742 | 0.819117 | 1.37E-52 | -1.69E-46 |
| MS.gene056043 | MS.gene32742 | -0.80076 | 1.24E-48 | -1.69E-46 |
| MS.gene056308 | MS.gene32742 | 0.822229 | 2.65E-53 | -1.69E-46 |
| MS.gene056507 | MS.gene32742 | 0.840623 | 7.78E-58 | -1.69E-46 |
| MS.gene058638 | MS.gene32742 | 0.826439 | 2.71E-54 | -1.69E-46 |
| MS.gene058639 | MS.gene32742 | 0.827946 | 1.18E-54 | -1.69E-46 |
| MS.gene058649 | MS.gene32742 | 0.833604 | 4.85E-56 | -1.69E-46 |
| MS.gene058668 | MS.gene32742 | 0.835454 | 1.66E-56 | -1.69E-46 |
| MS.gene058852 | MS.gene32742 | 0.806012 | 1.01E-49 | -1.69E-46 |
| MS.gene059171 | MS.gene32742 | 0.827371 | 1.62E-54 | -1.69E-46 |
| MS.gene059778 | MS.gene32742 | 0.802182 | 6.33E-49 | -1.69E-46 |
| MS.gene061006 | MS.gene32742 | 0.860911 | 1.48E-63 | -1.69E-46 |
| MS.gene061100 | MS.gene32742 | 0.8141 | 1.83E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene42649 | MS.gene32742 | PPI |
| MS.gene02692 | MS.gene32742 | PPI |
| MS.gene32742 | MS.gene014948 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32742.t1 | MTR_3g105430 | 99.024 | 717 | 6 | 1 | 1 | 717 | 1 | 716 | 0.0 | 1458 |
| MS.gene32742.t1 | MTR_7g056267 | 82.474 | 97 | 17 | 0 | 603 | 699 | 10 | 106 | 3.98e-45 | 159 |
| MS.gene32742.t1 | MTR_4g087280 | 24.000 | 400 | 265 | 14 | 225 | 615 | 51 | 420 | 3.30e-22 | 101 |
| MS.gene32742.t1 | MTR_4g087280 | 24.000 | 400 | 265 | 14 | 225 | 615 | 51 | 420 | 3.86e-22 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32742.t1 | AT5G27640 | 76.056 | 710 | 169 | 1 | 5 | 713 | 1 | 710 | 0.0 | 1155 |
| MS.gene32742.t1 | AT5G27640 | 76.056 | 710 | 169 | 1 | 5 | 713 | 1 | 710 | 0.0 | 1155 |
| MS.gene32742.t1 | AT5G25780 | 76.361 | 698 | 164 | 1 | 17 | 713 | 14 | 711 | 0.0 | 1147 |
| MS.gene32742.t1 | AT5G27640 | 73.370 | 736 | 169 | 2 | 5 | 713 | 1 | 736 | 0.0 | 1142 |
| MS.gene32742.t1 | AT1G49015 | 50.885 | 226 | 91 | 5 | 311 | 535 | 3 | 209 | 8.37e-66 | 217 |
| MS.gene32742.t1 | AT1G73180 | 22.931 | 423 | 290 | 11 | 195 | 610 | 18 | 411 | 2.57e-24 | 107 |
| MS.gene32742.t1 | AT1G73180 | 22.931 | 423 | 290 | 11 | 195 | 610 | 18 | 411 | 2.97e-24 | 107 |
Find 162 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGAAGGATCACTTCTTTC+AGG | 0.197022 | 3.1:-83238308 | MS.gene32742:intron |
| TCAGTTCATGAAATGGAAAA+TGG | 0.213561 | 3.1:-83238373 | MS.gene32742:CDS |
| TTGCCTGAGTTCTTCTTTGC+TGG | 0.214747 | 3.1:+83239076 | None:intergenic |
| TTCAATATATATAGTTCTTA+TGG | 0.217744 | 3.1:-83237999 | MS.gene32742:intron |
| CTGGAGTTTGATTCTGGATT+TGG | 0.226852 | 3.1:-83241066 | MS.gene32742:CDS |
| ACATACTCACAGAAAATATA+TGG | 0.231895 | 3.1:+83240725 | None:intergenic |
| GAGAATCTGGAGTTTGATTC+TGG | 0.241775 | 3.1:-83241072 | MS.gene32742:CDS |
| TTCACCTGGTGAGAAGTATT+TGG | 0.260721 | 3.1:-83239781 | MS.gene32742:CDS |
| TTTGAAGGTTGAAAATATAA+TGG | 0.262529 | 3.1:-83239326 | MS.gene32742:CDS |
| GAAGACAAAGCTTTGCTTCT+CGG | 0.279856 | 3.1:-83241275 | MS.gene32742:CDS |
| CTCGAGGATTGCTTGGTTCA+TGG | 0.280093 | 3.1:+83239745 | None:intergenic |
| CCTGGAGCATATTCCTTGTT+TGG | 0.282373 | 3.1:+83240652 | None:intergenic |
| TGGAAAATGGATTCAATATA+TGG | 0.298256 | 3.1:-83238360 | MS.gene32742:CDS |
| CTTACAGCACGTTTATAAAC+AGG | 0.307612 | 3.1:+83240170 | None:intergenic |
| GTATGTCACGTTCCTTTATA+CGG | 0.318455 | 3.1:+83238931 | None:intergenic |
| TGCCTGAGTTCTTCTTTGCT+GGG | 0.335374 | 3.1:+83239077 | None:intergenic |
| CATAGATTTGCTGTTATTCA+TGG | 0.340404 | 3.1:-83238840 | MS.gene32742:CDS |
| GTCACCTTTGGGTACTTACT+TGG | 0.345166 | 3.1:-83240018 | MS.gene32742:CDS |
| TCAATGGCAAACATCTTTAT+CGG | 0.350253 | 3.1:-83238333 | MS.gene32742:CDS |
| ATGCAACAGCTTCCATTCAT+TGG | 0.362435 | 3.1:+83237807 | None:intergenic |
| TTCCTCAACTTCAATGTCCT+TGG | 0.368351 | 3.1:+83237714 | None:intergenic |
| TGACATACCTATTGAAGTTC+TGG | 0.372905 | 3.1:-83238916 | MS.gene32742:CDS |
| AGTCAAGAAAGAGGCTGGTC+TGG | 0.374540 | 3.1:+83237972 | None:intergenic |
| AGCAGGCAAATGCTTTGTTT+TGG | 0.385029 | 3.1:-83238728 | MS.gene32742:CDS |
| TAGATACTAATATCAGGCTT+AGG | 0.385115 | 3.1:+83238810 | None:intergenic |
| CTCAACTTGAAGGATCTCTT+TGG | 0.396493 | 3.1:+83237678 | None:intergenic |
| TCCTTCTACTGAAAAGTCCT+TGG | 0.402875 | 3.1:-83240914 | MS.gene32742:CDS |
| AGGAACAAACAATGAAATGA+TGG | 0.426468 | 3.1:+83239279 | None:intergenic |
| ATAGAGTAGATACTAATATC+AGG | 0.429014 | 3.1:+83238804 | None:intergenic |
| TGTTATTCAAGAGGAGAATC+TGG | 0.430382 | 3.1:-83241085 | MS.gene32742:CDS |
| TCGAGCTCCAGAACTTCAAT+AGG | 0.431350 | 3.1:+83238909 | None:intergenic |
| TCATTGTTTGTTCCTGAGAC+AGG | 0.434027 | 3.1:-83239271 | MS.gene32742:CDS |
| ATAAGATCATTGCATTTGCT+TGG | 0.434886 | 3.1:-83238875 | MS.gene32742:CDS |
| CTCTTTCTTGACTGCTGAGA+AGG | 0.436026 | 3.1:-83237962 | MS.gene32742:CDS |
| GAAAGGTTTCAATGGACTGT+TGG | 0.438764 | 3.1:-83238670 | MS.gene32742:CDS |
| GGAGGAGGAGCCCACTCGTC+TGG | 0.438943 | 3.1:+83240673 | None:intergenic |
| AATTTCTCCTTGGGAACAAC+AGG | 0.441899 | 3.1:+83241018 | None:intergenic |
| AAGCTTCTCGAATTTCTCCT+TGG | 0.445814 | 3.1:+83241008 | None:intergenic |
| TAAGATCATTGCATTTGCTT+GGG | 0.448404 | 3.1:-83238874 | MS.gene32742:CDS |
| CTTGGCAACAGTTCACCGTC+AGG | 0.449567 | 3.1:-83240000 | MS.gene32742:CDS |
| CTATTAAAGAGGATGGTCTC+TGG | 0.450216 | 3.1:-83240948 | MS.gene32742:CDS |
| AGAGAGATGTACTTGAAAAC+AGG | 0.450761 | 3.1:+83239524 | None:intergenic |
| GGAGCATATTCCTTGTTTGG+AGG | 0.451980 | 3.1:+83240655 | None:intergenic |
| ACAGCAAATCTATGTCCCTT+TGG | 0.453395 | 3.1:+83238849 | None:intergenic |
| AGCTTCTCGAATTTCTCCTT+GGG | 0.454211 | 3.1:+83241009 | None:intergenic |
| TTCAATATATGGTCTTTCAA+TGG | 0.455846 | 3.1:-83238349 | MS.gene32742:CDS |
| AACCAGCACGAATCACAAAC+TGG | 0.455853 | 3.1:+83240240 | None:intergenic |
| GAAGACTCAAGGATACAAAC+TGG | 0.456776 | 3.1:-83240755 | MS.gene32742:CDS |
| TTTATGCAACTGATGTTGAA+TGG | 0.458529 | 3.1:-83238599 | MS.gene32742:CDS |
| TGTAACTTCAGTTCATGAAA+TGG | 0.459413 | 3.1:-83238380 | MS.gene32742:CDS |
| TGATAAGTACTTTGCAAGGA+TGG | 0.459925 | 3.1:-83239407 | MS.gene32742:CDS |
| CCTTCTACTGAAAAGTCCTT+GGG | 0.460856 | 3.1:-83240913 | MS.gene32742:CDS |
| CCAAACAAGGAATATGCTCC+AGG | 0.464666 | 3.1:-83240652 | MS.gene32742:CDS |
| GTCAAGAAAGAGGCTGGTCT+GGG | 0.472650 | 3.1:+83237973 | None:intergenic |
| TTTGTACAATGGTCACCTTT+GGG | 0.473131 | 3.1:-83240029 | MS.gene32742:CDS |
| CATGCGTTACGCACATCCTC+AGG | 0.475971 | 3.1:-83239937 | MS.gene32742:intron |
| GGAGGTACTGGAGGTGTCAC+TGG | 0.476252 | 3.1:-83239557 | MS.gene32742:CDS |
| TGAAAGAAGATTGGGACAAG+TGG | 0.476327 | 3.1:-83237831 | MS.gene32742:CDS |
| CATTGAAGTTGAGGAAATAG+TGG | 0.477980 | 3.1:-83237707 | MS.gene32742:CDS |
| TGCATTTGCTTGGGAGCCAA+AGG | 0.480773 | 3.1:-83238865 | MS.gene32742:CDS |
| AAAATATAATGGATTTCAGC+TGG | 0.484915 | 3.1:-83239315 | MS.gene32742:CDS |
| GAGTAGTGAGCTTTGAAACT+CGG | 0.485051 | 3.1:+83238760 | None:intergenic |
| GCTAATACTCCTCAACTTGA+AGG | 0.487202 | 3.1:+83237668 | None:intergenic |
| CAAAGGAAAATCTGCAACAA+TGG | 0.488176 | 3.1:-83240286 | MS.gene32742:intron |
| AAACAGAAATTTACCCTAGC+AGG | 0.488817 | 3.1:+83239235 | None:intergenic |
| GGGACAAGTGGGCCAATGAA+TGG | 0.489541 | 3.1:-83237819 | MS.gene32742:CDS |
| AGAAGCTAGTGATGAGGAAG+AGG | 0.489836 | 3.1:-83237746 | MS.gene32742:CDS |
| TTATGCAACTGATGTTGAAT+GGG | 0.491113 | 3.1:-83238598 | MS.gene32742:CDS |
| TGGTTACCACCTCCTGTCTC+AGG | 0.491207 | 3.1:+83239259 | None:intergenic |
| GTAGGGTCTTGAAAGAAGAT+TGG | 0.493073 | 3.1:-83237840 | MS.gene32742:CDS |
| GCATATTCCTTGTTTGGAGG+AGG | 0.495988 | 3.1:+83240658 | None:intergenic |
| ATGAAGAAGAGAAGCTAGAG+AGG | 0.497330 | 3.1:-83237786 | MS.gene32742:CDS |
| AGATACTAATATCAGGCTTA+GGG | 0.497798 | 3.1:+83238811 | None:intergenic |
| GACCAGTTTGTGATTCGTGC+TGG | 0.499072 | 3.1:-83240242 | MS.gene32742:CDS |
| GCAGGATTGAAAGGTTTCAA+TGG | 0.500217 | 3.1:-83238678 | MS.gene32742:CDS |
| AGGATTCCGCAGTTGTCACC+TGG | 0.502357 | 3.1:+83241209 | None:intergenic |
| GCACGTTTATAAACAGGGTC+GGG | 0.503903 | 3.1:+83240176 | None:intergenic |
| GAGGTGGTAACCAGCCTGCT+AGG | 0.506612 | 3.1:-83239249 | MS.gene32742:CDS |
| TTAGCATCTCGAGGATTGCT+TGG | 0.508363 | 3.1:+83239738 | None:intergenic |
| TAGGGTCTTGAAAGAAGATT+GGG | 0.508845 | 3.1:-83237839 | MS.gene32742:CDS |
| AACAAGAGCGTGAGAAGCGT+AGG | 0.510887 | 3.1:-83237858 | MS.gene32742:CDS |
| GGAACAAACAATGAAATGAT+GGG | 0.513266 | 3.1:+83239280 | None:intergenic |
| GATTCCATTCACCTTCCTCC+AGG | 0.514429 | 3.1:-83241227 | MS.gene32742:CDS |
| GGTCGCTTCATTGTACTAGC+AGG | 0.518685 | 3.1:-83238696 | MS.gene32742:CDS |
| GATGTTGAATGGGATCCAAC+TGG | 0.519724 | 3.1:-83238588 | MS.gene32742:CDS |
| CACTACTCTGAAAGGCAAGC+AGG | 0.520325 | 3.1:-83238745 | MS.gene32742:CDS |
| GCCTGAGTTCTTCTTTGCTG+GGG | 0.521347 | 3.1:+83239078 | None:intergenic |
| CATACTCACAGAAAATATAT+GGG | 0.522843 | 3.1:+83240726 | None:intergenic |
| TCAGCAGCAATGAAACATCT+TGG | 0.522882 | 3.1:+83237884 | None:intergenic |
| GTCACCTGGAGGAAGGTGAA+TGG | 0.523301 | 3.1:+83241223 | None:intergenic |
| TTTGTTCCTGAGACAGGAGG+TGG | 0.523334 | 3.1:-83239265 | MS.gene32742:CDS |
| GTGACAACTGCGGAATCCTC+AGG | 0.526265 | 3.1:-83241205 | MS.gene32742:intron |
| ATTTGGCAATATTATTGTAG+TGG | 0.528989 | 3.1:-83241049 | MS.gene32742:CDS |
| ATGCGGACGGCTCAGAACAC+TGG | 0.531191 | 3.1:-83238783 | MS.gene32742:CDS |
| CTTCTCAGCAGTCAAGAAAG+AGG | 0.535616 | 3.1:+83237963 | None:intergenic |
| CAAAGAGATCCTTCAAGTTG+AGG | 0.540194 | 3.1:-83237677 | MS.gene32742:CDS |
| CGCAGTTGTCACCTGGAGGA+AGG | 0.540787 | 3.1:+83241216 | None:intergenic |
| AATGGAATCGAGATCGATAG+AGG | 0.542175 | 3.1:+83241241 | None:intergenic |
| ATTGTACTAGCAGGATTGAA+AGG | 0.547734 | 3.1:-83238687 | MS.gene32742:CDS |
| TAGATAATATACCTTCCAGT+TGG | 0.547750 | 3.1:+83238573 | None:intergenic |
| TCAGCAGTCAAGAAAGAGGC+TGG | 0.549593 | 3.1:+83237967 | None:intergenic |
| AGCACGTTTATAAACAGGGT+CGG | 0.550976 | 3.1:+83240175 | None:intergenic |
| ACAAAGAAAAGCACATTCAC+AGG | 0.551860 | 3.1:-83238966 | MS.gene32742:CDS |
| CATTGAGTACAATACTCCTC+AGG | 0.551994 | 3.1:-83240881 | MS.gene32742:intron |
| GCATTTGCTTGGGAGCCAAA+GGG | 0.553319 | 3.1:-83238864 | MS.gene32742:CDS |
| AGCCAAGGACATTGAAGTTG+AGG | 0.555326 | 3.1:-83237716 | MS.gene32742:CDS |
| TAATCTACCTGTTGTTCCCA+AGG | 0.563226 | 3.1:-83241025 | MS.gene32742:CDS |
| AACATATTTGATGTGAGGAC+TGG | 0.564013 | 3.1:-83239626 | MS.gene32742:CDS |
| ACATCTTTATCGGATATTGA+AGG | 0.564648 | 3.1:-83238323 | MS.gene32742:CDS |
| TTTCTTGACTGCTGAGAAGG+AGG | 0.564955 | 3.1:-83237959 | MS.gene32742:CDS |
| TCAGTGACTGCAAGATGTAC+TGG | 0.566940 | 3.1:-83239037 | MS.gene32742:CDS |
| AGCTAGAGAGGGAAGATCTG+AGG | 0.568066 | 3.1:-83237774 | MS.gene32742:CDS |
| AGTACAATGAAGCGACCTGC+TGG | 0.569021 | 3.1:+83238702 | None:intergenic |
| AAAATGTTCAGTATTAGCCA+TGG | 0.570734 | 3.1:+83238620 | None:intergenic |
| TCAGATTGGTGCTATTAAAG+AGG | 0.572204 | 3.1:-83240959 | MS.gene32742:CDS |
| ACAATGGCTTACTGATGCTA+AGG | 0.574787 | 3.1:-83240270 | MS.gene32742:CDS |
| TTGTTTGTTCCTGAGACAGG+AGG | 0.576213 | 3.1:-83239268 | MS.gene32742:CDS |
| GATAAGTACTTTGCAAGGAT+GGG | 0.579491 | 3.1:-83239406 | MS.gene32742:CDS |
| TCAAAGCTCACTACTCTGAA+AGG | 0.580014 | 3.1:-83238753 | MS.gene32742:CDS |
| ATTGGTGCTATTAAAGAGGA+TGG | 0.581702 | 3.1:-83240955 | MS.gene32742:CDS |
| TTGGCAACAGTTCACCGTCA+GGG | 0.582074 | 3.1:-83239999 | MS.gene32742:CDS |
| GCTAGAGAGGGAAGATCTGA+GGG | 0.583255 | 3.1:-83237773 | MS.gene32742:CDS |
| GTAACGCATGAGACGATTGA+AGG | 0.583285 | 3.1:+83239950 | None:intergenic |
| AGAAATTTACCCTAGCAGGC+TGG | 0.583948 | 3.1:+83239239 | None:intergenic |
| CATGAAAGTGCCAGACGAGT+GGG | 0.584342 | 3.1:-83240683 | MS.gene32742:CDS |
| GTGGGCTCCTCCTCCAAACA+AGG | 0.584356 | 3.1:-83240665 | MS.gene32742:CDS |
| AATGAAATGATGGGATCAGT+TGG | 0.584945 | 3.1:+83239289 | None:intergenic |
| TCCCCAGCAAAGAAGAACTC+AGG | 0.587881 | 3.1:-83239079 | MS.gene32742:CDS |
| TGACGATGATGTTATTCAAG+AGG | 0.592706 | 3.1:-83241094 | MS.gene32742:CDS |
| GAGGTGTCACTGGAGTGTCA+TGG | 0.597067 | 3.1:-83239547 | MS.gene32742:CDS |
| TCATGAAAGTGCCAGACGAG+TGG | 0.602382 | 3.1:-83240684 | MS.gene32742:CDS |
| AGGTGGTAACCAGCCTGCTA+GGG | 0.602403 | 3.1:-83239248 | MS.gene32742:intron |
| AAGATGATAAGTACTTTGCA+AGG | 0.602451 | 3.1:-83239411 | MS.gene32742:CDS |
| TTTGCTATCGGAGGTACTGG+AGG | 0.604919 | 3.1:-83239566 | MS.gene32742:CDS |
| GAAAGAAGATTGGGACAAGT+GGG | 0.605311 | 3.1:-83237830 | MS.gene32742:CDS |
| TTTCTTTGCAGATGGAGTGG+TGG | 0.605394 | 3.1:-83239436 | MS.gene32742:intron |
| GGAAGAGGAATATGAAGCCA+AGG | 0.609071 | 3.1:-83237731 | MS.gene32742:CDS |
| CTTGCTAAAGAGAAGACTCA+AGG | 0.612535 | 3.1:-83240766 | MS.gene32742:CDS |
| CAAACAAGGAATATGCTCCA+GGG | 0.614249 | 3.1:-83240651 | MS.gene32742:CDS |
| TCGTGCTGGTTCAGATACTG+AGG | 0.620611 | 3.1:-83240228 | MS.gene32742:CDS |
| AACGATCAACATTAACAGCA+AGG | 0.625990 | 3.1:+83238997 | None:intergenic |
| GGACGGAGAAGCTAGTGATG+AGG | 0.627430 | 3.1:-83237752 | MS.gene32742:CDS |
| GTTACCAAATACTTCTCACC+AGG | 0.628866 | 3.1:+83239777 | None:intergenic |
| TGGCAACAGTTCACCGTCAG+GGG | 0.629158 | 3.1:-83239998 | MS.gene32742:CDS |
| AAGATGTACTGGCAGAGCAA+TGG | 0.630702 | 3.1:-83239026 | MS.gene32742:CDS |
| GAGAGGGAAGATCTGAGGGA+CGG | 0.631285 | 3.1:-83237769 | MS.gene32742:CDS |
| TAGTATCTACTCTATGCGGA+CGG | 0.640265 | 3.1:-83238796 | MS.gene32742:CDS |
| CTCAATGAAGCAGTAACCCA+AGG | 0.644342 | 3.1:+83240897 | None:intergenic |
| GGCAACAGTTCACCGTCAGG+GGG | 0.645973 | 3.1:-83239997 | MS.gene32742:CDS |
| TTGAATGGGATCCAACTGGA+AGG | 0.646444 | 3.1:-83238584 | MS.gene32742:intron |
| TGAAGAAGAGAAGCTAGAGA+GGG | 0.653533 | 3.1:-83237785 | MS.gene32742:CDS |
| ACAAGAGCGTGAGAAGCGTA+GGG | 0.657658 | 3.1:-83237857 | MS.gene32742:CDS |
| AAACAAGGAATATGCTCCAG+GGG | 0.658157 | 3.1:-83240650 | MS.gene32742:intron |
| TGATAAACATATTTGATGTG+AGG | 0.659557 | 3.1:-83239631 | MS.gene32742:CDS |
| TGTTGATGAGCTTGAAACCA+TGG | 0.663924 | 3.1:-83238637 | MS.gene32742:CDS |
| ACACTCACATTAGCATCTCG+AGG | 0.667806 | 3.1:+83239729 | None:intergenic |
| TTACAGCACGTTTATAAACA+GGG | 0.671673 | 3.1:+83240171 | None:intergenic |
| ACGCATGAGACGATTGAAGG+TGG | 0.677518 | 3.1:+83239953 | None:intergenic |
| CTTCCTCCAGGTGACAACTG+CGG | 0.689197 | 3.1:-83241215 | MS.gene32742:CDS |
| ATTCCGCAGTTGTCACCTGG+AGG | 0.690949 | 3.1:+83241212 | None:intergenic |
| GTTGCCAAGTAAGTACCCAA+AGG | 0.691070 | 3.1:+83240014 | None:intergenic |
| ATATTAGTATCTACTCTATG+CGG | 0.708759 | 3.1:-83238800 | MS.gene32742:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTTAATATCTTTTACT+TGG | - | chr3.1:83238622-83238641 | MS.gene32742:CDS | 10.0% |
| !! | TTCAATATATATAGTTCTTA+TGG | - | chr3.1:83240975-83240994 | MS.gene32742:CDS | 15.0% |
| !! | TTTGGTATAAAATTAACAAA+AGG | + | chr3.1:83238420-83238439 | None:intergenic | 15.0% |
| !!! | AATCATAAAATCTGAAATTA+TGG | + | chr3.1:83237829-83237848 | None:intergenic | 15.0% |
| !!! | ATTTTATACCAAAAACAAAT+AGG | - | chr3.1:83238427-83238446 | MS.gene32742:intron | 15.0% |
| !!! | TATTTTTTGAATTACAGTTT+TGG | - | chr3.1:83238913-83238932 | MS.gene32742:CDS | 15.0% |
| !! | AAAAAATATGACAACCATAA+AGG | + | chr3.1:83238901-83238920 | None:intergenic | 20.0% |
| !! | AAAAATATGACAACCATAAA+GGG | + | chr3.1:83238900-83238919 | None:intergenic | 20.0% |
| !! | AAAGAAAAAAAAAAAACCTG+AGG | + | chr3.1:83239056-83239075 | None:intergenic | 20.0% |
| !! | AGAAAAATTTATAGTCAGAT+TGG | - | chr3.1:83238001-83238020 | MS.gene32742:intron | 20.0% |
| !! | AGTATATGAATATAAATCTC+AGG | - | chr3.1:83239154-83239173 | MS.gene32742:intron | 20.0% |
| !! | ATCATATTTGTAATTCTACA+AGG | + | chr3.1:83238536-83238555 | None:intergenic | 20.0% |
| !! | ATTAAGAGATTAATGATCAA+AGG | + | chr3.1:83238877-83238896 | None:intergenic | 20.0% |
| !! | TGTAGAATTACAAATATGAT+TGG | - | chr3.1:83238536-83238555 | MS.gene32742:intron | 20.0% |
| !! | TTAAGAGATTAATGATCAAA+GGG | + | chr3.1:83238876-83238895 | None:intergenic | 20.0% |
| !! | TTTGAAGGTTGAAAATATAA+TGG | - | chr3.1:83239648-83239667 | MS.gene32742:intron | 20.0% |
| !!! | AAATATTGTACAGCAATTTT+TGG | + | chr3.1:83240930-83240949 | None:intergenic | 20.0% |
| !!! | ATGGTTATAGTTTTTTTACA+TGG | - | chr3.1:83240773-83240792 | MS.gene32742:CDS | 20.0% |
| !!! | GTAAATAGATACTCTTTTTT+AGG | - | chr3.1:83238115-83238134 | MS.gene32742:intron | 20.0% |
| !!! | TGGTTATAGTTTTTTTACAT+GGG | - | chr3.1:83240774-83240793 | MS.gene32742:CDS | 20.0% |
| !!! | TGTATTATTTGATGTTTTCT+AGG | - | chr3.1:83238849-83238868 | MS.gene32742:CDS | 20.0% |
| !!! | TTTTTAATTTCTGTTCTTGA+TGG | - | chr3.1:83239848-83239867 | MS.gene32742:intron | 20.0% |
| ! | AAGTCAACATTTAATAGCTA+CGG | + | chr3.1:83240507-83240526 | None:intergenic | 25.0% |
| ! | AATAAATACATACACACATG+AGG | + | chr3.1:83239826-83239845 | None:intergenic | 25.0% |
| ! | AATCACTATGTTCTTAAATC+TGG | - | chr3.1:83238585-83238604 | MS.gene32742:CDS | 25.0% |
| ! | ACATACTCACAGAAAATATA+TGG | + | chr3.1:83238252-83238271 | None:intergenic | 25.0% |
| ! | ATAGAGTAGATACTAATATC+AGG | + | chr3.1:83240173-83240192 | None:intergenic | 25.0% |
| ! | ATATTAGTATCTACTCTATG+CGG | - | chr3.1:83240174-83240193 | MS.gene32742:intron | 25.0% |
| ! | ATGCAAATTCATCACTAAAT+TGG | + | chr3.1:83239515-83239534 | None:intergenic | 25.0% |
| ! | ATGGATAACCAATATAAACA+TGG | + | chr3.1:83240547-83240566 | None:intergenic | 25.0% |
| ! | ATTTGGCAATATTATTGTAG+TGG | - | chr3.1:83237925-83237944 | MS.gene32742:CDS | 25.0% |
| ! | CATACTCACAGAAAATATAT+GGG | + | chr3.1:83238251-83238270 | None:intergenic | 25.0% |
| ! | CTATGTTTAGTGATTCTTAA+TGG | - | chr3.1:83238652-83238671 | MS.gene32742:CDS | 25.0% |
| ! | GTAGTTAGATACTTAGATTA+AGG | - | chr3.1:83238481-83238500 | MS.gene32742:intron | 25.0% |
| ! | TAAGAATCACTAAACATAGA+AGG | + | chr3.1:83238651-83238670 | None:intergenic | 25.0% |
| ! | TGATAAACATATTTGATGTG+AGG | - | chr3.1:83239343-83239362 | MS.gene32742:CDS | 25.0% |
| ! | TGGATAACCAATATAAACAT+GGG | + | chr3.1:83240546-83240565 | None:intergenic | 25.0% |
| ! | TTAATCTCTTAATCCCTTTA+TGG | - | chr3.1:83238884-83238903 | MS.gene32742:CDS | 25.0% |
| ! | TTAGTAAAGCTACTGAAAAA+AGG | + | chr3.1:83240885-83240904 | None:intergenic | 25.0% |
| ! | TTCAATATATGGTCTTTCAA+TGG | - | chr3.1:83240625-83240644 | MS.gene32742:intron | 25.0% |
| ! | TTGGATGTACAATGTTTATA+TGG | - | chr3.1:83240754-83240773 | MS.gene32742:CDS | 25.0% |
| !! | AAAGTGATGAGAGATTTTAA+GGG | - | chr3.1:83239372-83239391 | MS.gene32742:CDS | 25.0% |
| !! | ATTTTATCCGTGTATTACAA+TGG | - | chr3.1:83240716-83240735 | MS.gene32742:CDS | 25.0% |
| !! | TAAAGTGATGAGAGATTTTA+AGG | - | chr3.1:83239371-83239390 | MS.gene32742:CDS | 25.0% |
| !! | TGGAAAATGGATTCAATATA+TGG | - | chr3.1:83240614-83240633 | MS.gene32742:intron | 25.0% |
| !!! | AAAATATAATGGATTTCAGC+TGG | - | chr3.1:83239659-83239678 | MS.gene32742:intron | 25.0% |
| !!! | ACAAATATGATTGGTTTACT+TGG | - | chr3.1:83238545-83238564 | MS.gene32742:intron | 25.0% |
| !!! | TAAATTGCAATGGCTATTTT+AGG | - | chr3.1:83238177-83238196 | MS.gene32742:intron | 25.0% |
| !!! | TTCAATGTTTGTTTTACCAT+CGG | - | chr3.1:83238143-83238162 | MS.gene32742:intron | 25.0% |
| !!! | TTTTGAATTACAGTTTTGGA+CGG | - | chr3.1:83238917-83238936 | MS.gene32742:CDS | 25.0% |
| AAAATGTTCAGTATTAGCCA+TGG | + | chr3.1:83240357-83240376 | None:intergenic | 30.0% | |
| AACATACCTGTCGTATAAAA+TGG | + | chr3.1:83240566-83240585 | None:intergenic | 30.0% | |
| AAGATGATAAGTACTTTGCA+AGG | - | chr3.1:83239563-83239582 | MS.gene32742:CDS | 30.0% | |
| AAGCAATATCAACACACATT+TGG | + | chr3.1:83240428-83240447 | None:intergenic | 30.0% | |
| ACATCTTTATCGGATATTGA+AGG | - | chr3.1:83240651-83240670 | MS.gene32742:CDS | 30.0% | |
| AGAGAAAGAATGTTGTAGTT+AGG | + | chr3.1:83239314-83239333 | None:intergenic | 30.0% | |
| AGATACTAATATCAGGCTTA+GGG | + | chr3.1:83240166-83240185 | None:intergenic | 30.0% | |
| AGATCACCATATTAGGATTA+TGG | - | chr3.1:83238390-83238409 | MS.gene32742:CDS | 30.0% | |
| AGGAACAAACAATGAAATGA+TGG | + | chr3.1:83239698-83239717 | None:intergenic | 30.0% | |
| ATAAGATCATTGCATTTGCT+TGG | - | chr3.1:83240099-83240118 | MS.gene32742:intron | 30.0% | |
| ATTTCACGAAAAGCTCAAAA+TGG | + | chr3.1:83239287-83239306 | None:intergenic | 30.0% | |
| CGTTGACAAAAAATCTTTGA+AGG | - | chr3.1:83239633-83239652 | MS.gene32742:CDS | 30.0% | |
| GATCACCATATTAGGATTAT+GGG | - | chr3.1:83238391-83238410 | MS.gene32742:CDS | 30.0% | |
| GGAACAAACAATGAAATGAT+GGG | + | chr3.1:83239697-83239716 | None:intergenic | 30.0% | |
| GGATAACCAATATAAACATG+GGG | + | chr3.1:83240545-83240564 | None:intergenic | 30.0% | |
| TAAGATCATTGCATTTGCTT+GGG | - | chr3.1:83240100-83240119 | MS.gene32742:intron | 30.0% | |
| TACAACATTCTTTCTCTAGA+GGG | - | chr3.1:83239317-83239336 | MS.gene32742:CDS | 30.0% | |
| TACATCCAAAAGTCATTCTT+TGG | + | chr3.1:83240743-83240762 | None:intergenic | 30.0% | |
| TAGATAATATACCTTCCAGT+TGG | + | chr3.1:83240404-83240423 | None:intergenic | 30.0% | |
| TAGATACTAATATCAGGCTT+AGG | + | chr3.1:83240167-83240186 | None:intergenic | 30.0% | |
| TCAATGGCAAACATCTTTAT+CGG | - | chr3.1:83240641-83240660 | MS.gene32742:intron | 30.0% | |
| TCAGTTCATGAAATGGAAAA+TGG | - | chr3.1:83240601-83240620 | MS.gene32742:intron | 30.0% | |
| TGTAACTTCAGTTCATGAAA+TGG | - | chr3.1:83240594-83240613 | MS.gene32742:intron | 30.0% | |
| TTACAGCACGTTTATAAACA+GGG | + | chr3.1:83238806-83238825 | None:intergenic | 30.0% | |
| TTATGCAACTGATGTTGAAT+GGG | - | chr3.1:83240376-83240395 | MS.gene32742:intron | 30.0% | |
| TTGATGAGGTTAAATTGCAA+TGG | - | chr3.1:83238167-83238186 | MS.gene32742:intron | 30.0% | |
| TTTATGCAACTGATGTTGAA+TGG | - | chr3.1:83240375-83240394 | MS.gene32742:intron | 30.0% | |
| ! | AAAACTTTTACAGCCAACAA+TGG | + | chr3.1:83240809-83240828 | None:intergenic | 30.0% |
| ! | ATGGTCTTTATTTCTCTCAA+AGG | - | chr3.1:83238671-83238690 | MS.gene32742:CDS | 30.0% |
| ! | TCATTTGAGATCACCATATT+AGG | - | chr3.1:83238383-83238402 | MS.gene32742:CDS | 30.0% |
| !! | AAAAAAGGCTTTTGGAAACA+AGG | + | chr3.1:83240870-83240889 | None:intergenic | 30.0% |
| !! | AAAAAGGCTTTTGGAAACAA+GGG | + | chr3.1:83240869-83240888 | None:intergenic | 30.0% |
| !! | AAAGAGTATCTATTTACCTG+AGG | + | chr3.1:83238112-83238131 | None:intergenic | 30.0% |
| !! | AGCATTGATTAATATACCTG+AGG | + | chr3.1:83237788-83237807 | None:intergenic | 30.0% |
| !! | CATAGATTTGCTGTTATTCA+TGG | - | chr3.1:83240134-83240153 | MS.gene32742:intron | 30.0% |
| !!! | AAGCTTATTGATTTTTCACC+TGG | - | chr3.1:83239179-83239198 | MS.gene32742:intron | 30.0% |
| !!! | TACAGCAATTTTTGGTTTGT+GGG | + | chr3.1:83240922-83240941 | None:intergenic | 30.0% |
| !!! | TGCATTTTTTTCTTTGCAGA+TGG | - | chr3.1:83239530-83239549 | MS.gene32742:intron | 30.0% |
| AAACAGAAATTTACCCTAGC+AGG | + | chr3.1:83239742-83239761 | None:intergenic | 35.0% | |
| AACATAGTGATTGAACGTTG+GGG | + | chr3.1:83238577-83238596 | None:intergenic | 35.0% | |
| AACATATTTGATGTGAGGAC+TGG | - | chr3.1:83239348-83239367 | MS.gene32742:CDS | 35.0% | |
| AACGATCAACATTAACAGCA+AGG | + | chr3.1:83239980-83239999 | None:intergenic | 35.0% | |
| ACTGATCCCCATGTTTATAT+TGG | - | chr3.1:83240536-83240555 | MS.gene32742:intron | 35.0% | |
| AGAACATAGTGATTGAACGT+TGG | + | chr3.1:83238579-83238598 | None:intergenic | 35.0% | |
| AGAGAGATGTACTTGAAAAC+AGG | + | chr3.1:83239453-83239472 | None:intergenic | 35.0% | |
| AGAGATATAATCATTACCCC+TGG | + | chr3.1:83238343-83238362 | None:intergenic | 35.0% | |
| ATTGAAGGATCACTTCTTTC+AGG | - | chr3.1:83240666-83240685 | MS.gene32742:CDS | 35.0% | |
| ATTGTACTAGCAGGATTGAA+AGG | - | chr3.1:83240287-83240306 | MS.gene32742:intron | 35.0% | |
| ATTTAACCTCATCAAACCGA+TGG | + | chr3.1:83238162-83238181 | None:intergenic | 35.0% | |
| CAAAGGAAAATCTGCAACAA+TGG | - | chr3.1:83238688-83238707 | MS.gene32742:CDS | 35.0% | |
| CATTACACATGACCATAGAA+GGG | + | chr3.1:83239770-83239789 | None:intergenic | 35.0% | |
| CATTGAAGTTGAGGAAATAG+TGG | - | chr3.1:83241267-83241286 | MS.gene32742:CDS | 35.0% | |
| CTACAACATTCTTTCTCTAG+AGG | - | chr3.1:83239316-83239335 | MS.gene32742:CDS | 35.0% | |
| CTTACAGCACGTTTATAAAC+AGG | + | chr3.1:83238807-83238826 | None:intergenic | 35.0% | |
| CTTTGGACCATTGTAATACA+CGG | + | chr3.1:83240726-83240745 | None:intergenic | 35.0% | |
| GAACATAGTGATTGAACGTT+GGG | + | chr3.1:83238578-83238597 | None:intergenic | 35.0% | |
| GATAAGTACTTTGCAAGGAT+GGG | - | chr3.1:83239568-83239587 | MS.gene32742:CDS | 35.0% | |
| GTATGTCACGTTCCTTTATA+CGG | + | chr3.1:83240046-83240065 | None:intergenic | 35.0% | |
| TAGGGTCTTGAAAGAAGATT+GGG | - | chr3.1:83241135-83241154 | MS.gene32742:intron | 35.0% | |
| TGACATACCTATTGAAGTTC+TGG | - | chr3.1:83240058-83240077 | MS.gene32742:intron | 35.0% | |
| TGACGATGATGTTATTCAAG+AGG | - | chr3.1:83237880-83237899 | MS.gene32742:CDS | 35.0% | |
| TGATAAGTACTTTGCAAGGA+TGG | - | chr3.1:83239567-83239586 | MS.gene32742:CDS | 35.0% | |
| TGTTATTCAAGAGGAGAATC+TGG | - | chr3.1:83237889-83237908 | MS.gene32742:CDS | 35.0% | |
| TTATCCATGATCTTCAACCT+TGG | + | chr3.1:83240452-83240471 | None:intergenic | 35.0% | |
| TTGTAATTCTACAAGGAGTG+TGG | + | chr3.1:83238529-83238548 | None:intergenic | 35.0% | |
| TTTGTACAATGGTCACCTTT+GGG | - | chr3.1:83238945-83238964 | MS.gene32742:CDS | 35.0% | |
| ! | AATGAAATGATGGGATCAGT+TGG | + | chr3.1:83239688-83239707 | None:intergenic | 35.0% |
| ! | ACAAAGAAAAGCACATTCAC+AGG | - | chr3.1:83240008-83240027 | MS.gene32742:CDS | 35.0% |
| ! | AGCTACTGAAAAAAGGCTTT+TGG | + | chr3.1:83240878-83240897 | None:intergenic | 35.0% |
| ! | ATGGTCCAAAGAATGACTTT+TGG | - | chr3.1:83240735-83240754 | MS.gene32742:CDS | 35.0% |
| ! | CTTTGAGCTTTTCCGTATAA+AGG | - | chr3.1:83240031-83240050 | MS.gene32742:CDS | 35.0% |
| ! | GAATGTGCTTTTCTTTGTCT+TGG | + | chr3.1:83240006-83240025 | None:intergenic | 35.0% |
| ! | GGCAATTTCATGTTTTCTCA+TGG | - | chr3.1:83238502-83238521 | MS.gene32742:intron | 35.0% |
| ! | GGTTATCCATTTTATACGAC+AGG | - | chr3.1:83240557-83240576 | MS.gene32742:intron | 35.0% |
| ! | TGTGTTGATATTGCTTACCA+AGG | - | chr3.1:83240432-83240451 | MS.gene32742:intron | 35.0% |
| ! | TTTTCAGTAGAAGGATCAAC+AGG | + | chr3.1:83238055-83238074 | None:intergenic | 35.0% |
| ! | TTTTGTACAATGGTCACCTT+TGG | - | chr3.1:83238944-83238963 | MS.gene32742:CDS | 35.0% |
| !! | AAGTGGTGCCTATTTGTTTT+TGG | + | chr3.1:83238438-83238457 | None:intergenic | 35.0% |
| !! | ATTGGTGCTATTAAAGAGGA+TGG | - | chr3.1:83238019-83238038 | MS.gene32742:intron | 35.0% |
| !! | TCAGATTGGTGCTATTAAAG+AGG | - | chr3.1:83238015-83238034 | MS.gene32742:intron | 35.0% |
| !! | TCTGTTCTTGATGGATTTGT+AGG | - | chr3.1:83239857-83239876 | MS.gene32742:intron | 35.0% |
| !!! | AGTGCTGATGATTTTGCTAT+CGG | - | chr3.1:83239396-83239415 | MS.gene32742:CDS | 35.0% |
| !!! | GTACAGCAATTTTTGGTTTG+TGG | + | chr3.1:83240923-83240942 | None:intergenic | 35.0% |
| !!! | TTTTTTCTTTGCAGATGGAG+TGG | - | chr3.1:83239535-83239554 | MS.gene32742:intron | 35.0% |
| AAACAAGGAATATGCTCCAG+GGG | - | chr3.1:83238324-83238343 | MS.gene32742:CDS | 40.0% | |
| AAGCTTCTCGAATTTCTCCT+TGG | + | chr3.1:83237969-83237988 | None:intergenic | 40.0% | |
| AATGGAATCGAGATCGATAG+AGG | + | chr3.1:83237736-83237755 | None:intergenic | 40.0% | |
| AATTTCTCCTTGGGAACAAC+AGG | + | chr3.1:83237959-83237978 | None:intergenic | 40.0% | |
| ACAATGGCTTACTGATGCTA+AGG | - | chr3.1:83238704-83238723 | MS.gene32742:CDS | 40.0% | |
| ACAGCAAATCTATGTCCCTT+TGG | + | chr3.1:83240128-83240147 | None:intergenic | 40.0% | |
| AGCACGTTTATAAACAGGGT+CGG | + | chr3.1:83238802-83238821 | None:intergenic | 40.0% | |
| AGCTTCTCGAATTTCTCCTT+GGG | + | chr3.1:83237968-83237987 | None:intergenic | 40.0% | |
| ATGAAGAAGAGAAGCTAGAG+AGG | - | chr3.1:83241188-83241207 | MS.gene32742:intron | 40.0% | |
| ATGCAACAGCTTCCATTCAT+TGG | + | chr3.1:83241170-83241189 | None:intergenic | 40.0% | |
| CAAACAAGGAATATGCTCCA+GGG | - | chr3.1:83238323-83238342 | MS.gene32742:CDS | 40.0% | |
| CATCGTCATCACTACATACA+TGG | + | chr3.1:83237868-83237887 | None:intergenic | 40.0% | |
| CATTGAGTACAATACTCCTC+AGG | - | chr3.1:83238093-83238112 | MS.gene32742:intron | 40.0% | |
| CCATTACACATGACCATAGA+AGG | + | chr3.1:83239771-83239790 | None:intergenic | 40.0% | |
| CCTTCTACTGAAAAGTCCTT+GGG | - | chr3.1:83238061-83238080 | MS.gene32742:intron | 40.0% | |
| CCTTCTATGGTCATGTGTAA+TGG | - | chr3.1:83239768-83239787 | MS.gene32742:CDS | 40.0% | |
| CTATTAAAGAGGATGGTCTC+TGG | - | chr3.1:83238026-83238045 | MS.gene32742:intron | 40.0% | |
| CTCAACTTGAAGGATCTCTT+TGG | + | chr3.1:83241299-83241318 | None:intergenic | 40.0% | |
| CTGGAGTTTGATTCTGGATT+TGG | - | chr3.1:83237908-83237927 | MS.gene32742:CDS | 40.0% | |
| CTTACCAAGGTTGAAGATCA+TGG | - | chr3.1:83240445-83240464 | MS.gene32742:intron | 40.0% | |
| CTTGCTAAAGAGAAGACTCA+AGG | - | chr3.1:83238208-83238227 | MS.gene32742:intron | 40.0% | |
| GAAAGAAGATTGGGACAAGT+GGG | - | chr3.1:83241144-83241163 | MS.gene32742:intron | 40.0% | |
| GAAGACAAAGCTTTGCTTCT+CGG | - | chr3.1:83237699-83237718 | MS.gene32742:CDS | 40.0% | |
| GAAGACTCAAGGATACAAAC+TGG | - | chr3.1:83238219-83238238 | MS.gene32742:intron | 40.0% | |
| GCAGGATTGAAAGGTTTCAA+TGG | - | chr3.1:83240296-83240315 | MS.gene32742:intron | 40.0% | |
| GGTCTCCCATAATCCTAATA+TGG | + | chr3.1:83238399-83238418 | None:intergenic | 40.0% | |
| GTAGGGTCTTGAAAGAAGAT+TGG | - | chr3.1:83241134-83241153 | MS.gene32742:intron | 40.0% | |
| GTTACCAAATACTTCTCACC+AGG | + | chr3.1:83239200-83239219 | None:intergenic | 40.0% | |
| TAATCTACCTGTTGTTCCCA+AGG | - | chr3.1:83237949-83237968 | MS.gene32742:CDS | 40.0% | |
| TAGTATCTACTCTATGCGGA+CGG | - | chr3.1:83240178-83240197 | MS.gene32742:CDS | 40.0% | |
| TCAAAGCTCACTACTCTGAA+AGG | - | chr3.1:83240221-83240240 | MS.gene32742:CDS | 40.0% | |
| TCAGCAGCAATGAAACATCT+TGG | + | chr3.1:83241093-83241112 | None:intergenic | 40.0% | |
| TCATTGTTTGTTCCTGAGAC+AGG | - | chr3.1:83239703-83239722 | MS.gene32742:intron | 40.0% | |
| TCCTTCTACTGAAAAGTCCT+TGG | - | chr3.1:83238060-83238079 | MS.gene32742:intron | 40.0% | |
| TGAAAGAAGATTGGGACAAG+TGG | - | chr3.1:83241143-83241162 | MS.gene32742:intron | 40.0% | |
| TGAAGAAGAGAAGCTAGAGA+GGG | - | chr3.1:83241189-83241208 | MS.gene32742:intron | 40.0% | |
| TGGGATTGTGAATCCATTGT+TGG | - | chr3.1:83240793-83240812 | MS.gene32742:intron | 40.0% | |
| TTCCTCAACTTCAATGTCCT+TGG | + | chr3.1:83241263-83241282 | None:intergenic | 40.0% | |
| ! | GAGAATCTGGAGTTTGATTC+TGG | - | chr3.1:83237902-83237921 | MS.gene32742:CDS | 40.0% |
| ! | GTTCAGATACTGAGGTTTTG+TGG | - | chr3.1:83238754-83238773 | MS.gene32742:CDS | 40.0% |
| ! | TCTGTTTTCCTTCCCTTCTA+TGG | - | chr3.1:83239755-83239774 | MS.gene32742:CDS | 40.0% |
| ! | TGTTGATGAGCTTGAAACCA+TGG | - | chr3.1:83240337-83240356 | MS.gene32742:intron | 40.0% |
| !! | CAAAGAGATCCTTCAAGTTG+AGG | - | chr3.1:83241297-83241316 | MS.gene32742:CDS | 40.0% |
| !! | GAAAGGTTTCAATGGACTGT+TGG | - | chr3.1:83240304-83240323 | MS.gene32742:intron | 40.0% |
| !! | GAGTAGTGAGCTTTGAAACT+CGG | + | chr3.1:83240217-83240236 | None:intergenic | 40.0% |
| !! | TTCACCTGGTGAGAAGTATT+TGG | - | chr3.1:83239193-83239212 | MS.gene32742:intron | 40.0% |
| !!! | AGCAGGCAAATGCTTTGTTT+TGG | - | chr3.1:83240246-83240265 | MS.gene32742:CDS | 40.0% |
| !!! | GTTTTACCATCGGTTTGATG+AGG | - | chr3.1:83238153-83238172 | MS.gene32742:intron | 40.0% |
| AACCAGCACGAATCACAAAC+TGG | + | chr3.1:83238737-83238756 | None:intergenic | 45.0% | |
| ACACATGACCATAGAAGGGA+AGG | + | chr3.1:83239766-83239785 | None:intergenic | 45.0% | |
| ACACTCACATTAGCATCTCG+AGG | + | chr3.1:83239248-83239267 | None:intergenic | 45.0% | |
| AGAAATTTACCCTAGCAGGC+TGG | + | chr3.1:83239738-83239757 | None:intergenic | 45.0% | |
| AGAAGCTAGTGATGAGGAAG+AGG | - | chr3.1:83241228-83241247 | MS.gene32742:CDS | 45.0% | |
| AGCCAAGGACATTGAAGTTG+AGG | - | chr3.1:83241258-83241277 | MS.gene32742:CDS | 45.0% | |
| CCAAACAAGGAATATGCTCC+AGG | - | chr3.1:83238322-83238341 | MS.gene32742:CDS | 45.0% | |
| CCTGGAGCATATTCCTTGTT+TGG | + | chr3.1:83238325-83238344 | None:intergenic | 45.0% | |
| CTCAATGAAGCAGTAACCCA+AGG | + | chr3.1:83238080-83238099 | None:intergenic | 45.0% | |
| CTCTTTCTTGACTGCTGAGA+AGG | - | chr3.1:83241012-83241031 | MS.gene32742:CDS | 45.0% | |
| CTTCTCAGCAGTCAAGAAAG+AGG | + | chr3.1:83241014-83241033 | None:intergenic | 45.0% | |
| GATGTTGAATGGGATCCAAC+TGG | - | chr3.1:83240386-83240405 | MS.gene32742:intron | 45.0% | |
| GCACGTTTATAAACAGGGTC+GGG | + | chr3.1:83238801-83238820 | None:intergenic | 45.0% | |
| GGAAGAGGAATATGAAGCCA+AGG | - | chr3.1:83241243-83241262 | MS.gene32742:CDS | 45.0% | |
| GTAACGCATGAGACGATTGA+AGG | + | chr3.1:83239027-83239046 | None:intergenic | 45.0% | |
| GTCACCTTTGGGTACTTACT+TGG | - | chr3.1:83238956-83238975 | MS.gene32742:CDS | 45.0% | |
| GTTGCCAAGTAAGTACCCAA+AGG | + | chr3.1:83238963-83238982 | None:intergenic | 45.0% | |
| TCAGTGACTGCAAGATGTAC+TGG | - | chr3.1:83239937-83239956 | MS.gene32742:intron | 45.0% | |
| TCGAGCTCCAGAACTTCAAT+AGG | + | chr3.1:83240068-83240087 | None:intergenic | 45.0% | |
| TGCCTGAGTTCTTCTTTGCT+GGG | + | chr3.1:83239900-83239919 | None:intergenic | 45.0% | |
| TTAGCATCTCGAGGATTGCT+TGG | + | chr3.1:83239239-83239258 | None:intergenic | 45.0% | |
| TTGAATGGGATCCAACTGGA+AGG | - | chr3.1:83240390-83240409 | MS.gene32742:intron | 45.0% | |
| TTGCCTGAGTTCTTCTTTGC+TGG | + | chr3.1:83239901-83239920 | None:intergenic | 45.0% | |
| TTGTTTGTTCCTGAGACAGG+AGG | - | chr3.1:83239706-83239725 | MS.gene32742:intron | 45.0% | |
| TTTCTTGACTGCTGAGAAGG+AGG | - | chr3.1:83241015-83241034 | MS.gene32742:CDS | 45.0% | |
| TTTCTTTGCAGATGGAGTGG+TGG | - | chr3.1:83239538-83239557 | MS.gene32742:CDS | 45.0% | |
| ! | AAGATGTACTGGCAGAGCAA+TGG | - | chr3.1:83239948-83239967 | MS.gene32742:CDS | 45.0% |
| ! | CCCAAGGACTTTTCAGTAGA+AGG | + | chr3.1:83238064-83238083 | None:intergenic | 45.0% |
| ! | GCATATTCCTTGTTTGGAGG+AGG | + | chr3.1:83238319-83238338 | None:intergenic | 45.0% |
| ! | GGAGCATATTCCTTGTTTGG+AGG | + | chr3.1:83238322-83238341 | None:intergenic | 45.0% |
| !! | GATTTTGCTATCGGAGGTAC+TGG | - | chr3.1:83239405-83239424 | MS.gene32742:CDS | 45.0% |
| !! | GCTGATGATTTTGCTATCGG+AGG | - | chr3.1:83239399-83239418 | MS.gene32742:CDS | 45.0% |
| !! | GGACGGAGAGTTTTGTACAA+TGG | - | chr3.1:83238934-83238953 | MS.gene32742:CDS | 45.0% |
| ACAACCAAGTAGCACGCAAG+TGG | + | chr3.1:83238455-83238474 | None:intergenic | 50.0% | |
| ACGCATGAGACGATTGAAGG+TGG | + | chr3.1:83239024-83239043 | None:intergenic | 50.0% | |
| AGCTAGAGAGGGAAGATCTG+AGG | - | chr3.1:83241200-83241219 | MS.gene32742:intron | 50.0% | |
| AGTACAATGAAGCGACCTGC+TGG | + | chr3.1:83240275-83240294 | None:intergenic | 50.0% | |
| CTCGAGGATTGCTTGGTTCA+TGG | + | chr3.1:83239232-83239251 | None:intergenic | 50.0% | |
| GACCAGTTTGTGATTCGTGC+TGG | - | chr3.1:83238732-83238751 | MS.gene32742:CDS | 50.0% | |
| GATTCCATTCACCTTCCTCC+AGG | - | chr3.1:83237747-83237766 | MS.gene32742:CDS | 50.0% | |
| GCATTTGCTTGGGAGCCAAA+GGG | - | chr3.1:83240110-83240129 | MS.gene32742:intron | 50.0% | |
| GCCTGAGTTCTTCTTTGCTG+GGG | + | chr3.1:83239899-83239918 | None:intergenic | 50.0% | |
| GCTAGAGAGGGAAGATCTGA+GGG | - | chr3.1:83241201-83241220 | MS.gene32742:intron | 50.0% | |
| GGTCGCTTCATTGTACTAGC+AGG | - | chr3.1:83240278-83240297 | MS.gene32742:CDS | 50.0% | |
| TCAGCAGTCAAGAAAGAGGC+TGG | + | chr3.1:83241010-83241029 | None:intergenic | 50.0% | |
| TCCCCAGCAAAGAAGAACTC+AGG | - | chr3.1:83239895-83239914 | MS.gene32742:intron | 50.0% | |
| TGCATTTGCTTGGGAGCCAA+AGG | - | chr3.1:83240109-83240128 | MS.gene32742:intron | 50.0% | |
| TTGGCAACAGTTCACCGTCA+GGG | - | chr3.1:83238975-83238994 | MS.gene32742:CDS | 50.0% | |
| TTTGTTCCTGAGACAGGAGG+TGG | - | chr3.1:83239709-83239728 | MS.gene32742:intron | 50.0% | |
| ! | AACAAGAGCGTGAGAAGCGT+AGG | - | chr3.1:83241116-83241135 | MS.gene32742:intron | 50.0% |
| ! | ACAAGAGCGTGAGAAGCGTA+GGG | - | chr3.1:83241117-83241136 | MS.gene32742:intron | 50.0% |
| ! | AGTCAAGAAAGAGGCTGGTC+TGG | + | chr3.1:83241005-83241024 | None:intergenic | 50.0% |
| ! | CACTACTCTGAAAGGCAAGC+AGG | - | chr3.1:83240229-83240248 | MS.gene32742:CDS | 50.0% |
| !! | CATGAAAGTGCCAGACGAGT+GGG | - | chr3.1:83238291-83238310 | MS.gene32742:intron | 50.0% |
| !! | GTCAAGAAAGAGGCTGGTCT+GGG | + | chr3.1:83241004-83241023 | None:intergenic | 50.0% |
| !! | TCATGAAAGTGCCAGACGAG+TGG | - | chr3.1:83238290-83238309 | MS.gene32742:intron | 50.0% |
| !! | TCGTGCTGGTTCAGATACTG+AGG | - | chr3.1:83238746-83238765 | MS.gene32742:CDS | 50.0% |
| !! | TTTGCTATCGGAGGTACTGG+AGG | - | chr3.1:83239408-83239427 | MS.gene32742:CDS | 50.0% |
| !!! | GCTTTGTTTTGGTCACCAGC+AGG | - | chr3.1:83240257-83240276 | MS.gene32742:CDS | 50.0% |
| AGGATTCCGCAGTTGTCACC+TGG | + | chr3.1:83237768-83237787 | None:intergenic | 55.0% | |
| AGGTGGTAACCAGCCTGCTA+GGG | - | chr3.1:83239726-83239745 | MS.gene32742:intron | 55.0% | |
| ATTCCGCAGTTGTCACCTGG+AGG | + | chr3.1:83237765-83237784 | None:intergenic | 55.0% | |
| CATGCGTTACGCACATCCTC+AGG | - | chr3.1:83239037-83239056 | MS.gene32742:CDS | 55.0% | |
| CTTCCTCCAGGTGACAACTG+CGG | - | chr3.1:83237759-83237778 | MS.gene32742:CDS | 55.0% | |
| CTTGGCAACAGTTCACCGTC+AGG | - | chr3.1:83238974-83238993 | MS.gene32742:CDS | 55.0% | |
| GAGAGGGAAGATCTGAGGGA+CGG | - | chr3.1:83241205-83241224 | MS.gene32742:intron | 55.0% | |
| GGACGGAGAAGCTAGTGATG+AGG | - | chr3.1:83241222-83241241 | MS.gene32742:CDS | 55.0% | |
| GGGACAAGTGGGCCAATGAA+TGG | - | chr3.1:83241155-83241174 | MS.gene32742:intron | 55.0% | |
| GTCACCTGGAGGAAGGTGAA+TGG | + | chr3.1:83237754-83237773 | None:intergenic | 55.0% | |
| GTGACAACTGCGGAATCCTC+AGG | - | chr3.1:83237769-83237788 | MS.gene32742:CDS | 55.0% | |
| TGGCAACAGTTCACCGTCAG+GGG | - | chr3.1:83238976-83238995 | MS.gene32742:CDS | 55.0% | |
| TGGTTACCACCTCCTGTCTC+AGG | + | chr3.1:83239718-83239737 | None:intergenic | 55.0% | |
| !! | GAGGTGTCACTGGAGTGTCA+TGG | - | chr3.1:83239427-83239446 | MS.gene32742:CDS | 55.0% |
| ATGCGGACGGCTCAGAACAC+TGG | - | chr3.1:83240191-83240210 | MS.gene32742:CDS | 60.0% | |
| CGCAGTTGTCACCTGGAGGA+AGG | + | chr3.1:83237761-83237780 | None:intergenic | 60.0% | |
| GAGGTGGTAACCAGCCTGCT+AGG | - | chr3.1:83239725-83239744 | MS.gene32742:intron | 60.0% | |
| GGCAACAGTTCACCGTCAGG+GGG | - | chr3.1:83238977-83238996 | MS.gene32742:CDS | 60.0% | |
| GTGGGCTCCTCCTCCAAACA+AGG | - | chr3.1:83238309-83238328 | MS.gene32742:CDS | 60.0% | |
| ! | GGCACCACTTGCGTGCTACT+TGG | - | chr3.1:83238448-83238467 | MS.gene32742:intron | 60.0% |
| !! | GGAGGTACTGGAGGTGTCAC+TGG | - | chr3.1:83239417-83239436 | MS.gene32742:CDS | 60.0% |
| ACCGTCAGGGGGCAGCAGTT+TGG | - | chr3.1:83238988-83239007 | MS.gene32742:CDS | 65.0% | |
| CCCAAACTGCTGCCCCCTGA+CGG | + | chr3.1:83238992-83239011 | None:intergenic | 65.0% | |
| CCGTCAGGGGGCAGCAGTTT+GGG | - | chr3.1:83238989-83239008 | MS.gene32742:CDS | 65.0% | |
| CGTCAGGGGGCAGCAGTTTG+GGG | - | chr3.1:83238990-83239009 | MS.gene32742:CDS | 65.0% | |
| CAGGGGGCAGCAGTTTGGGG+AGG | - | chr3.1:83238993-83239012 | MS.gene32742:CDS | 70.0% | |
| GGAGGAGGAGCCCACTCGTC+TGG | + | chr3.1:83238304-83238323 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 83237669 | 83241327 | 83237669 | ID=MS.gene32742 |
| chr3.1 | mRNA | 83237669 | 83241327 | 83237669 | ID=MS.gene32742.t1;Parent=MS.gene32742 |
| chr3.1 | exon | 83241206 | 83241327 | 83241206 | ID=MS.gene32742.t1.exon1;Parent=MS.gene32742.t1 |
| chr3.1 | CDS | 83241206 | 83241327 | 83241206 | ID=cds.MS.gene32742.t1;Parent=MS.gene32742.t1 |
| chr3.1 | exon | 83240882 | 83241119 | 83240882 | ID=MS.gene32742.t1.exon2;Parent=MS.gene32742.t1 |
| chr3.1 | CDS | 83240882 | 83241119 | 83240882 | ID=cds.MS.gene32742.t1;Parent=MS.gene32742.t1 |
| chr3.1 | exon | 83240651 | 83240797 | 83240651 | ID=MS.gene32742.t1.exon3;Parent=MS.gene32742.t1 |
| chr3.1 | CDS | 83240651 | 83240797 | 83240651 | ID=cds.MS.gene32742.t1;Parent=MS.gene32742.t1 |
| chr3.1 | exon | 83240175 | 83240303 | 83240175 | ID=MS.gene32742.t1.exon4;Parent=MS.gene32742.t1 |
| chr3.1 | CDS | 83240175 | 83240303 | 83240175 | ID=cds.MS.gene32742.t1;Parent=MS.gene32742.t1 |
| chr3.1 | exon | 83239938 | 83240066 | 83239938 | ID=MS.gene32742.t1.exon5;Parent=MS.gene32742.t1 |
| chr3.1 | CDS | 83239938 | 83240066 | 83239938 | ID=cds.MS.gene32742.t1;Parent=MS.gene32742.t1 |
| chr3.1 | exon | 83239737 | 83239820 | 83239737 | ID=MS.gene32742.t1.exon6;Parent=MS.gene32742.t1 |
| chr3.1 | CDS | 83239737 | 83239820 | 83239737 | ID=cds.MS.gene32742.t1;Parent=MS.gene32742.t1 |
| chr3.1 | exon | 83239536 | 83239660 | 83239536 | ID=MS.gene32742.t1.exon7;Parent=MS.gene32742.t1 |
| chr3.1 | CDS | 83239536 | 83239660 | 83239536 | ID=cds.MS.gene32742.t1;Parent=MS.gene32742.t1 |
| chr3.1 | exon | 83239249 | 83239447 | 83239249 | ID=MS.gene32742.t1.exon8;Parent=MS.gene32742.t1 |
| chr3.1 | CDS | 83239249 | 83239447 | 83239249 | ID=cds.MS.gene32742.t1;Parent=MS.gene32742.t1 |
| chr3.1 | exon | 83238585 | 83239117 | 83238585 | ID=MS.gene32742.t1.exon9;Parent=MS.gene32742.t1 |
| chr3.1 | CDS | 83238585 | 83239117 | 83238585 | ID=cds.MS.gene32742.t1;Parent=MS.gene32742.t1 |
| chr3.1 | exon | 83238309 | 83238417 | 83238309 | ID=MS.gene32742.t1.exon10;Parent=MS.gene32742.t1 |
| chr3.1 | CDS | 83238309 | 83238417 | 83238309 | ID=cds.MS.gene32742.t1;Parent=MS.gene32742.t1 |
| chr3.1 | exon | 83237669 | 83238007 | 83237669 | ID=MS.gene32742.t1.exon11;Parent=MS.gene32742.t1 |
| chr3.1 | CDS | 83237669 | 83238007 | 83237669 | ID=cds.MS.gene32742.t1;Parent=MS.gene32742.t1 |
| Gene Sequence |
| Protein sequence |
