Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02692.t1 | XP_003603240.2 | 99 | 717 | 6 | 1 | 1 | 717 | 1 | 716 | 0.00E+00 | 1439.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02692.t1 | P56821 | 78.0 | 718 | 154 | 3 | 1 | 716 | 1 | 716 | 0.0e+00 | 1146.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02692.t1 | G7J950 | 99.0 | 717 | 6 | 1 | 1 | 717 | 1 | 716 | 0.0e+00 | 1439.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene02692 | MS.gene014948 | PPI |
| MS.gene02692 | MS.gene32742 | PPI |
| MS.gene42649 | MS.gene02692 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02692.t1 | MTR_3g105430 | 99.024 | 717 | 6 | 1 | 1 | 717 | 1 | 716 | 0.0 | 1459 |
| MS.gene02692.t1 | MTR_7g056267 | 83.505 | 97 | 16 | 0 | 603 | 699 | 10 | 106 | 8.48e-46 | 160 |
| MS.gene02692.t1 | MTR_4g087280 | 24.000 | 400 | 265 | 14 | 225 | 615 | 51 | 420 | 2.91e-22 | 101 |
| MS.gene02692.t1 | MTR_4g087280 | 24.000 | 400 | 265 | 14 | 225 | 615 | 51 | 420 | 3.86e-22 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02692.t1 | AT5G27640 | 76.197 | 710 | 168 | 1 | 5 | 713 | 1 | 710 | 0.0 | 1157 |
| MS.gene02692.t1 | AT5G27640 | 76.197 | 710 | 168 | 1 | 5 | 713 | 1 | 710 | 0.0 | 1157 |
| MS.gene02692.t1 | AT5G25780 | 76.504 | 698 | 163 | 1 | 17 | 713 | 14 | 711 | 0.0 | 1150 |
| MS.gene02692.t1 | AT5G27640 | 73.505 | 736 | 168 | 2 | 5 | 713 | 1 | 736 | 0.0 | 1143 |
| MS.gene02692.t1 | AT1G49015 | 50.885 | 226 | 91 | 5 | 311 | 535 | 3 | 209 | 7.62e-66 | 217 |
| MS.gene02692.t1 | AT1G73180 | 22.931 | 423 | 290 | 11 | 195 | 610 | 18 | 411 | 2.26e-24 | 107 |
| MS.gene02692.t1 | AT1G73180 | 22.931 | 423 | 290 | 11 | 195 | 610 | 18 | 411 | 2.57e-24 | 107 |
Find 162 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGAAGGATCACTTCTTTC+AGG | 0.197022 | 3.3:-86605557 | MS.gene02692:intron |
| TCAGTTCATGAAATGGAAAA+TGG | 0.213561 | 3.3:-86605622 | MS.gene02692:CDS |
| TTGCCTGAGTTCTTCTTTGC+TGG | 0.214747 | 3.3:+86606325 | None:intergenic |
| TTCAATATATATAGTTCTTA+TGG | 0.217744 | 3.3:-86605248 | MS.gene02692:intron |
| CTGGAGTTTGATTCTGGATT+TGG | 0.226852 | 3.3:-86608316 | MS.gene02692:CDS |
| ACATACTCACAGAAAATATA+TGG | 0.231895 | 3.3:+86607974 | None:intergenic |
| GAGAATCTGGAGTTTGATTC+TGG | 0.241775 | 3.3:-86608322 | MS.gene02692:CDS |
| TTCACCTGGTGAGAAGTATT+TGG | 0.260721 | 3.3:-86607030 | MS.gene02692:CDS |
| TTTGAAGGTTGAAAATATAA+TGG | 0.262529 | 3.3:-86606575 | MS.gene02692:CDS |
| GAAGACAAAGCTTTGCTTCT+CGG | 0.279856 | 3.3:-86608525 | MS.gene02692:CDS |
| CTCGAGGATTGCTTGGTTCA+TGG | 0.280093 | 3.3:+86606994 | None:intergenic |
| CCTGGAGCATATTCCTTGTT+TGG | 0.282373 | 3.3:+86607901 | None:intergenic |
| TGGAAAATGGATTCAATATA+TGG | 0.298256 | 3.3:-86605609 | MS.gene02692:CDS |
| CTTACAGCACGTTTATAAAC+AGG | 0.307612 | 3.3:+86607419 | None:intergenic |
| GTATGTCACGTTCCTTTATA+CGG | 0.318455 | 3.3:+86606180 | None:intergenic |
| TGCCTGAGTTCTTCTTTGCT+GGG | 0.335374 | 3.3:+86606326 | None:intergenic |
| CATAGATTTGCTGTTATTCA+TGG | 0.340404 | 3.3:-86606089 | MS.gene02692:CDS |
| GTCACCTTTGGGTACTTACT+TGG | 0.345166 | 3.3:-86607267 | MS.gene02692:CDS |
| TCAATGGCAAACATCTTTAT+CGG | 0.350253 | 3.3:-86605582 | MS.gene02692:CDS |
| ATGCAACAGCTTCCATTCAT+TGG | 0.362435 | 3.3:+86605056 | None:intergenic |
| TTCCTCAACTTCAATGTCCT+TGG | 0.368351 | 3.3:+86604963 | None:intergenic |
| TGACATACCTATTGAAGTTC+TGG | 0.372905 | 3.3:-86606165 | MS.gene02692:CDS |
| AGTCAAGAAAGAGGCTGGTC+TGG | 0.374540 | 3.3:+86605221 | None:intergenic |
| AGCAGGCAAATGCTTTGTTT+TGG | 0.385029 | 3.3:-86605977 | MS.gene02692:CDS |
| TAGATACTAATATCAGGCTT+AGG | 0.385115 | 3.3:+86606059 | None:intergenic |
| CTCAACTTGAAGGATCTCTT+TGG | 0.396493 | 3.3:+86604927 | None:intergenic |
| TCCTTCTACTGAAAAGTCCT+TGG | 0.402875 | 3.3:-86608164 | MS.gene02692:CDS |
| AGGAACAAACAATGAAATGA+TGG | 0.426468 | 3.3:+86606528 | None:intergenic |
| ATAGAGTAGATACTAATATC+AGG | 0.429014 | 3.3:+86606053 | None:intergenic |
| TGTTATTCAAGAGGAGAATC+TGG | 0.430382 | 3.3:-86608335 | MS.gene02692:CDS |
| TCGAGCTCCAGAACTTCAAT+AGG | 0.431350 | 3.3:+86606158 | None:intergenic |
| TCATTGTTTGTTCCTGAGAC+AGG | 0.434027 | 3.3:-86606520 | MS.gene02692:CDS |
| ATAAGATCATTGCATTTGCT+TGG | 0.434886 | 3.3:-86606124 | MS.gene02692:CDS |
| CTCTTTCTTGACTGCTGAGA+AGG | 0.436026 | 3.3:-86605211 | MS.gene02692:CDS |
| GAAAGGTTTCAATGGACTGT+TGG | 0.438764 | 3.3:-86605919 | MS.gene02692:CDS |
| GGAGGAGGAGCCCACTCGTC+TGG | 0.438943 | 3.3:+86607922 | None:intergenic |
| AATTTCTCCTTGGGAACAAC+AGG | 0.441899 | 3.3:+86608268 | None:intergenic |
| AAGCTTCTCGAATTTCTCCT+TGG | 0.445814 | 3.3:+86608258 | None:intergenic |
| TAAGATCATTGCATTTGCTT+GGG | 0.448404 | 3.3:-86606123 | MS.gene02692:CDS |
| CTTGGCAACAGTTCACCGTC+AGG | 0.449567 | 3.3:-86607249 | MS.gene02692:CDS |
| CTATTAAAGAGGATGGTCTC+TGG | 0.450216 | 3.3:-86608198 | MS.gene02692:CDS |
| AGAGAGATGTACTTGAAAAC+AGG | 0.450761 | 3.3:+86606773 | None:intergenic |
| GGAGCATATTCCTTGTTTGG+AGG | 0.451980 | 3.3:+86607904 | None:intergenic |
| ACAGCAAATCTATGTCCCTT+TGG | 0.453395 | 3.3:+86606098 | None:intergenic |
| AGCTTCTCGAATTTCTCCTT+GGG | 0.454211 | 3.3:+86608259 | None:intergenic |
| TTCAATATATGGTCTTTCAA+TGG | 0.455846 | 3.3:-86605598 | MS.gene02692:CDS |
| AACCAGCACGAATCACAAAC+TGG | 0.455853 | 3.3:+86607489 | None:intergenic |
| GAAGACTCAAGGATACAAAC+TGG | 0.456776 | 3.3:-86608004 | MS.gene02692:CDS |
| TTTATGCAACTGATGTTGAA+TGG | 0.458529 | 3.3:-86605848 | MS.gene02692:CDS |
| TGTAACTTCAGTTCATGAAA+TGG | 0.459413 | 3.3:-86605629 | MS.gene02692:CDS |
| TGATAAGTACTTTGCAAGGA+TGG | 0.459925 | 3.3:-86606656 | MS.gene02692:CDS |
| CCTTCTACTGAAAAGTCCTT+GGG | 0.460856 | 3.3:-86608163 | MS.gene02692:CDS |
| CCAAACAAGGAATATGCTCC+AGG | 0.464666 | 3.3:-86607901 | MS.gene02692:CDS |
| GTCAAGAAAGAGGCTGGTCT+GGG | 0.472650 | 3.3:+86605222 | None:intergenic |
| TTTGTACAATGGTCACCTTT+GGG | 0.473131 | 3.3:-86607278 | MS.gene02692:CDS |
| CATGCGTTACGCACATCCTC+AGG | 0.475971 | 3.3:-86607186 | MS.gene02692:intron |
| GGAGGTACTGGAGGTGTCAC+TGG | 0.476252 | 3.3:-86606806 | MS.gene02692:CDS |
| TGAAAGAAGATTGGGACAAG+TGG | 0.476327 | 3.3:-86605080 | MS.gene02692:CDS |
| CATTGAAGTTGAGGAAATAG+TGG | 0.477980 | 3.3:-86604956 | MS.gene02692:CDS |
| TGCATTTGCTTGGGAGCCAA+AGG | 0.480773 | 3.3:-86606114 | MS.gene02692:CDS |
| AAAATATAATGGATTTCAGC+TGG | 0.484915 | 3.3:-86606564 | MS.gene02692:CDS |
| GAGTAGTGAGCTTTGAAACT+CGG | 0.485051 | 3.3:+86606009 | None:intergenic |
| GCTAATACTCCTCAACTTGA+AGG | 0.487202 | 3.3:+86604917 | None:intergenic |
| CAAAGGAAAATCTGCAACAA+TGG | 0.488176 | 3.3:-86607535 | MS.gene02692:intron |
| AAACAGAAATTTACCCTAGC+AGG | 0.488817 | 3.3:+86606484 | None:intergenic |
| GGGACAAGTGGGCCAATGAA+TGG | 0.489541 | 3.3:-86605068 | MS.gene02692:CDS |
| AGAAGCTAGTGATGAGGAAG+AGG | 0.489836 | 3.3:-86604995 | MS.gene02692:CDS |
| TTATGCAACTGATGTTGAAT+GGG | 0.491113 | 3.3:-86605847 | MS.gene02692:CDS |
| TGGTTACCACCTCCTGTCTC+AGG | 0.491207 | 3.3:+86606508 | None:intergenic |
| GTAGGGTCTTGAAAGAAGAT+TGG | 0.493073 | 3.3:-86605089 | MS.gene02692:CDS |
| GCATATTCCTTGTTTGGAGG+AGG | 0.495988 | 3.3:+86607907 | None:intergenic |
| ATGAAGAAGAGAAGCTAGAG+AGG | 0.497330 | 3.3:-86605035 | MS.gene02692:CDS |
| AGATACTAATATCAGGCTTA+GGG | 0.497798 | 3.3:+86606060 | None:intergenic |
| GACCAGTTTGTGATTCGTGC+TGG | 0.499072 | 3.3:-86607491 | MS.gene02692:CDS |
| GCAGGATTGAAAGGTTTCAA+TGG | 0.500217 | 3.3:-86605927 | MS.gene02692:CDS |
| AGGATTCCGCAGTTGTCACC+TGG | 0.502357 | 3.3:+86608459 | None:intergenic |
| GCACGTTTATAAACAGGGTC+GGG | 0.503903 | 3.3:+86607425 | None:intergenic |
| GAGGTGGTAACCAGCCTGCT+AGG | 0.506612 | 3.3:-86606498 | MS.gene02692:CDS |
| TTAGCATCTCGAGGATTGCT+TGG | 0.508363 | 3.3:+86606987 | None:intergenic |
| TAGGGTCTTGAAAGAAGATT+GGG | 0.508845 | 3.3:-86605088 | MS.gene02692:CDS |
| AACAAGAGCGTGAGAAGCGT+AGG | 0.510887 | 3.3:-86605107 | MS.gene02692:CDS |
| GGAACAAACAATGAAATGAT+GGG | 0.513266 | 3.3:+86606529 | None:intergenic |
| GATTCCATTCACCTTCCTCC+AGG | 0.514429 | 3.3:-86608477 | MS.gene02692:CDS |
| GGTCGCTTCATTGTACTAGC+AGG | 0.518685 | 3.3:-86605945 | MS.gene02692:CDS |
| GATGTTGAATGGGATCCAAC+TGG | 0.519724 | 3.3:-86605837 | MS.gene02692:CDS |
| CACTACTCTGAAAGGCAAGC+AGG | 0.520325 | 3.3:-86605994 | MS.gene02692:CDS |
| GCCTGAGTTCTTCTTTGCTG+GGG | 0.521347 | 3.3:+86606327 | None:intergenic |
| CATACTCACAGAAAATATAT+GGG | 0.522843 | 3.3:+86607975 | None:intergenic |
| TCAGCAGCAATGAAACATCT+TGG | 0.522882 | 3.3:+86605133 | None:intergenic |
| GTCACCTGGAGGAAGGTGAA+TGG | 0.523301 | 3.3:+86608473 | None:intergenic |
| TTTGTTCCTGAGACAGGAGG+TGG | 0.523334 | 3.3:-86606514 | MS.gene02692:CDS |
| GTGACAACTGCGGAATCCTC+AGG | 0.526265 | 3.3:-86608455 | MS.gene02692:intron |
| ATGCGGACGGCTCAGAACAC+TGG | 0.531191 | 3.3:-86606032 | MS.gene02692:CDS |
| CTTCTCAGCAGTCAAGAAAG+AGG | 0.535616 | 3.3:+86605212 | None:intergenic |
| CAAAGAGATCCTTCAAGTTG+AGG | 0.540194 | 3.3:-86604926 | MS.gene02692:CDS |
| CGCAGTTGTCACCTGGAGGA+AGG | 0.540787 | 3.3:+86608466 | None:intergenic |
| AATGGAATCGAGATCGATAG+AGG | 0.542175 | 3.3:+86608491 | None:intergenic |
| ATTGTACTAGCAGGATTGAA+AGG | 0.547734 | 3.3:-86605936 | MS.gene02692:CDS |
| TAGATAATATACCTTCCAGT+TGG | 0.547750 | 3.3:+86605822 | None:intergenic |
| TCAGCAGTCAAGAAAGAGGC+TGG | 0.549593 | 3.3:+86605216 | None:intergenic |
| AGCACGTTTATAAACAGGGT+CGG | 0.550976 | 3.3:+86607424 | None:intergenic |
| ACAAAGAAAAGCACATTCAC+AGG | 0.551860 | 3.3:-86606215 | MS.gene02692:CDS |
| CATTGAGTACAATACTCCTC+AGG | 0.551994 | 3.3:-86608131 | MS.gene02692:intron |
| GCATTTGCTTGGGAGCCAAA+GGG | 0.553319 | 3.3:-86606113 | MS.gene02692:CDS |
| ATTTGGCAATATTATTGTCG+TGG | 0.553330 | 3.3:-86608299 | MS.gene02692:CDS |
| AGCCAAGGACATTGAAGTTG+AGG | 0.555326 | 3.3:-86604965 | MS.gene02692:CDS |
| TAATCTACCTGTTGTTCCCA+AGG | 0.563226 | 3.3:-86608275 | MS.gene02692:CDS |
| AACATATTTGATGTGAGGAC+TGG | 0.564013 | 3.3:-86606875 | MS.gene02692:CDS |
| ACATCTTTATCGGATATTGA+AGG | 0.564648 | 3.3:-86605572 | MS.gene02692:CDS |
| TTTCTTGACTGCTGAGAAGG+AGG | 0.564955 | 3.3:-86605208 | MS.gene02692:CDS |
| TCAGTGACTGCAAGATGTAC+TGG | 0.566940 | 3.3:-86606286 | MS.gene02692:CDS |
| AGCTAGAGAGGGAAAATCTG+AGG | 0.568066 | 3.3:-86605023 | MS.gene02692:CDS |
| AGTACAATGAAGCGACCTGC+TGG | 0.569021 | 3.3:+86605951 | None:intergenic |
| AAAATGTTCAGTATTAGCCA+TGG | 0.570734 | 3.3:+86605869 | None:intergenic |
| TCAGATTGGTGCTATTAAAG+AGG | 0.572204 | 3.3:-86608209 | MS.gene02692:CDS |
| ACAATGGCTTACTGATGCTA+AGG | 0.574787 | 3.3:-86607519 | MS.gene02692:CDS |
| TTGTTTGTTCCTGAGACAGG+AGG | 0.576213 | 3.3:-86606517 | MS.gene02692:CDS |
| GATAAGTACTTTGCAAGGAT+GGG | 0.579491 | 3.3:-86606655 | MS.gene02692:CDS |
| TCAAAGCTCACTACTCTGAA+AGG | 0.580014 | 3.3:-86606002 | MS.gene02692:CDS |
| ATTGGTGCTATTAAAGAGGA+TGG | 0.581702 | 3.3:-86608205 | MS.gene02692:CDS |
| TTGGCAACAGTTCACCGTCA+GGG | 0.582074 | 3.3:-86607248 | MS.gene02692:CDS |
| GTAACGCATGAGACGATTGA+AGG | 0.583285 | 3.3:+86607199 | None:intergenic |
| AGAAATTTACCCTAGCAGGC+TGG | 0.583948 | 3.3:+86606488 | None:intergenic |
| CATGAAAGTGCCAGACGAGT+GGG | 0.584342 | 3.3:-86607932 | MS.gene02692:CDS |
| GTGGGCTCCTCCTCCAAACA+AGG | 0.584356 | 3.3:-86607914 | MS.gene02692:CDS |
| AATGAAATGATGGGATCAGT+TGG | 0.584945 | 3.3:+86606538 | None:intergenic |
| TCCCCAGCAAAGAAGAACTC+AGG | 0.587881 | 3.3:-86606328 | MS.gene02692:CDS |
| TGACGATGATGTTATTCAAG+AGG | 0.592706 | 3.3:-86608344 | MS.gene02692:CDS |
| GAGGTGTCACTGGAGTGTCA+TGG | 0.597067 | 3.3:-86606796 | MS.gene02692:CDS |
| TCATGAAAGTGCCAGACGAG+TGG | 0.602382 | 3.3:-86607933 | MS.gene02692:CDS |
| AGGTGGTAACCAGCCTGCTA+GGG | 0.602403 | 3.3:-86606497 | MS.gene02692:intron |
| AAGATGATAAGTACTTTGCA+AGG | 0.602451 | 3.3:-86606660 | MS.gene02692:CDS |
| TTTGCTATCGGAGGTACTGG+AGG | 0.604919 | 3.3:-86606815 | MS.gene02692:CDS |
| GAAAGAAGATTGGGACAAGT+GGG | 0.605311 | 3.3:-86605079 | MS.gene02692:CDS |
| TTTCTTTGCAGATGGAGTGG+TGG | 0.605394 | 3.3:-86606685 | MS.gene02692:intron |
| TGATAAACATATTTGATGTG+AGG | 0.607112 | 3.3:-86606880 | MS.gene02692:CDS |
| GGAAGAGGAATATGAAGCCA+AGG | 0.609071 | 3.3:-86604980 | MS.gene02692:CDS |
| CTTGCTAAAGAGAAGACTCA+AGG | 0.612535 | 3.3:-86608015 | MS.gene02692:CDS |
| CAAACAAGGAATATGCTCCA+GGG | 0.614249 | 3.3:-86607900 | MS.gene02692:CDS |
| GAGAGGGAAAATCTGAGGGA+CGG | 0.615059 | 3.3:-86605018 | MS.gene02692:CDS |
| TCGTGCTGGTTCAGATACTG+AGG | 0.620611 | 3.3:-86607477 | MS.gene02692:CDS |
| AACGATCAACATTAACAGCA+AGG | 0.625990 | 3.3:+86606246 | None:intergenic |
| GGACGGAGAAGCTAGTGATG+AGG | 0.627430 | 3.3:-86605001 | MS.gene02692:CDS |
| GTTACCAAATACTTCTCACC+AGG | 0.628866 | 3.3:+86607026 | None:intergenic |
| TGGCAACAGTTCACCGTCAG+GGG | 0.629158 | 3.3:-86607247 | MS.gene02692:CDS |
| GCTAGAGAGGGAAAATCTGA+GGG | 0.630478 | 3.3:-86605022 | MS.gene02692:CDS |
| AAGATGTACTGGCAGAGCAA+TGG | 0.630702 | 3.3:-86606275 | MS.gene02692:CDS |
| TAGTATCTACTCTATGCGGA+CGG | 0.640265 | 3.3:-86606045 | MS.gene02692:CDS |
| CTCAATGAAGCAGTAACCCA+AGG | 0.644342 | 3.3:+86608147 | None:intergenic |
| GGCAACAGTTCACCGTCAGG+GGG | 0.645973 | 3.3:-86607246 | MS.gene02692:CDS |
| TTGAATGGGATCCAACTGGA+AGG | 0.646444 | 3.3:-86605833 | MS.gene02692:intron |
| ACAAGAGCGTGAGAAGCGTA+GGG | 0.657658 | 3.3:-86605106 | MS.gene02692:CDS |
| AAACAAGGAATATGCTCCAG+GGG | 0.658157 | 3.3:-86607899 | MS.gene02692:intron |
| TGTTGATGAGCTTGAAACCA+TGG | 0.663924 | 3.3:-86605886 | MS.gene02692:CDS |
| TGAAGAAGAGAAGCTAGAGA+GGG | 0.666164 | 3.3:-86605034 | MS.gene02692:CDS |
| ACACTCACATTAGCATCTCG+AGG | 0.667806 | 3.3:+86606978 | None:intergenic |
| TTACAGCACGTTTATAAACA+GGG | 0.671673 | 3.3:+86607420 | None:intergenic |
| ACGCATGAGACGATTGAAGG+TGG | 0.677518 | 3.3:+86607202 | None:intergenic |
| CTTCCTCCAGGTGACAACTG+CGG | 0.689197 | 3.3:-86608465 | MS.gene02692:CDS |
| ATTCCGCAGTTGTCACCTGG+AGG | 0.690949 | 3.3:+86608462 | None:intergenic |
| GTTGCCAAGTAAGTACCCAA+AGG | 0.691070 | 3.3:+86607263 | None:intergenic |
| ATATTAGTATCTACTCTATG+CGG | 0.708759 | 3.3:-86606049 | MS.gene02692:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAATAGATACTTTTTTTTT+AGG | - | chr3.3:86605365-86605384 | MS.gene02692:intron | 10.0% |
| !!! | TTAATTTAATATCTTTTACT+TGG | - | chr3.3:86605872-86605891 | MS.gene02692:CDS | 10.0% |
| !! | TTCAATATATATAGTTCTTA+TGG | - | chr3.3:86608225-86608244 | MS.gene02692:CDS | 15.0% |
| !! | TTTGGTATAAAATTAACAAA+AGG | + | chr3.3:86605670-86605689 | None:intergenic | 15.0% |
| !!! | AATCATAAAATCTGAAATTA+TGG | + | chr3.3:86605078-86605097 | None:intergenic | 15.0% |
| !!! | ATTTTATACCAAAAACAAAT+AGG | - | chr3.3:86605677-86605696 | MS.gene02692:intron | 15.0% |
| !!! | TATTTTTTGAATTACAGTTT+TGG | - | chr3.3:86606163-86606182 | MS.gene02692:CDS | 15.0% |
| !! | AAAAAATATGACAACCATAA+AGG | + | chr3.3:86606151-86606170 | None:intergenic | 20.0% |
| !! | AAAAATATGACAACCATAAA+GGG | + | chr3.3:86606150-86606169 | None:intergenic | 20.0% |
| !! | AAAGAAAAAAAAAAAACCTG+AGG | + | chr3.3:86606306-86606325 | None:intergenic | 20.0% |
| !! | AGAAAAATTTATAGTCAGAT+TGG | - | chr3.3:86605250-86605269 | MS.gene02692:intron | 20.0% |
| !! | AGTATATGAATATAAATCTC+AGG | - | chr3.3:86606404-86606423 | MS.gene02692:intron | 20.0% |
| !! | ATCATATTTGTAATTCTACA+AGG | + | chr3.3:86605786-86605805 | None:intergenic | 20.0% |
| !! | ATTAAGAGATTAATGATCAA+AGG | + | chr3.3:86606127-86606146 | None:intergenic | 20.0% |
| !! | TGTAGAATTACAAATATGAT+TGG | - | chr3.3:86605786-86605805 | MS.gene02692:intron | 20.0% |
| !! | TTAAGAGATTAATGATCAAA+GGG | + | chr3.3:86606126-86606145 | None:intergenic | 20.0% |
| !! | TTTGAAGGTTGAAAATATAA+TGG | - | chr3.3:86606898-86606917 | MS.gene02692:intron | 20.0% |
| !!! | AAATATTGTACAGCAATTTT+TGG | + | chr3.3:86608180-86608199 | None:intergenic | 20.0% |
| !!! | ATGGTTATAGTTTTTTTACA+TGG | - | chr3.3:86608023-86608042 | MS.gene02692:CDS | 20.0% |
| !!! | TGGTTATAGTTTTTTTACAT+GGG | - | chr3.3:86608024-86608043 | MS.gene02692:CDS | 20.0% |
| !!! | TGTATTATTTGATGTTTTCT+AGG | - | chr3.3:86606099-86606118 | MS.gene02692:CDS | 20.0% |
| !!! | TTTTTAATTTCTGTTCTTGA+TGG | - | chr3.3:86607098-86607117 | MS.gene02692:intron | 20.0% |
| ! | AAGTCAACATTTAATAGCTA+CGG | + | chr3.3:86607757-86607776 | None:intergenic | 25.0% |
| ! | AATAAATACATACACACATG+AGG | + | chr3.3:86607076-86607095 | None:intergenic | 25.0% |
| ! | AATCACTATGTTCTTAAATC+TGG | - | chr3.3:86605835-86605854 | MS.gene02692:CDS | 25.0% |
| ! | ACATACTCACAGAAAATATA+TGG | + | chr3.3:86605502-86605521 | None:intergenic | 25.0% |
| ! | ATAGAGTAGATACTAATATC+AGG | + | chr3.3:86607423-86607442 | None:intergenic | 25.0% |
| ! | ATATTAGTATCTACTCTATG+CGG | - | chr3.3:86607424-86607443 | MS.gene02692:CDS | 25.0% |
| ! | ATGCAAATTCATCACTAAAT+TGG | + | chr3.3:86606765-86606784 | None:intergenic | 25.0% |
| ! | ATGGATAACCAATATAAACA+TGG | + | chr3.3:86607797-86607816 | None:intergenic | 25.0% |
| ! | CATACTCACAGAAAATATAT+GGG | + | chr3.3:86605501-86605520 | None:intergenic | 25.0% |
| ! | CTATGTTTAGTGATTCTTAA+TGG | - | chr3.3:86605902-86605921 | MS.gene02692:CDS | 25.0% |
| ! | GTAGTTAGATACTTAGATTA+AGG | - | chr3.3:86605731-86605750 | MS.gene02692:intron | 25.0% |
| ! | TAAGAATCACTAAACATAGA+AGG | + | chr3.3:86605901-86605920 | None:intergenic | 25.0% |
| ! | TGATAAACATATTTGATGTG+AGG | - | chr3.3:86606593-86606612 | MS.gene02692:CDS | 25.0% |
| ! | TGGATAACCAATATAAACAT+GGG | + | chr3.3:86607796-86607815 | None:intergenic | 25.0% |
| ! | TTAATCTCTTAATCCCTTTA+TGG | - | chr3.3:86606134-86606153 | MS.gene02692:CDS | 25.0% |
| ! | TTAGTAAAGCTACTGAAAAA+AGG | + | chr3.3:86608135-86608154 | None:intergenic | 25.0% |
| ! | TTCAATATATGGTCTTTCAA+TGG | - | chr3.3:86607875-86607894 | MS.gene02692:intron | 25.0% |
| ! | TTGGATGTACAATGTTTATA+TGG | - | chr3.3:86608004-86608023 | MS.gene02692:CDS | 25.0% |
| !! | AAAGTGATGAGAGATTTTAA+GGG | - | chr3.3:86606622-86606641 | MS.gene02692:CDS | 25.0% |
| !! | ATTTTATCCGTGTATTACAA+TGG | - | chr3.3:86607966-86607985 | MS.gene02692:CDS | 25.0% |
| !! | TAAAGTGATGAGAGATTTTA+AGG | - | chr3.3:86606621-86606640 | MS.gene02692:CDS | 25.0% |
| !! | TGGAAAATGGATTCAATATA+TGG | - | chr3.3:86607864-86607883 | MS.gene02692:intron | 25.0% |
| !!! | AAAAAGTATCTATTTACCTG+AGG | + | chr3.3:86605361-86605380 | None:intergenic | 25.0% |
| !!! | AAAATATAATGGATTTCAGC+TGG | - | chr3.3:86606909-86606928 | MS.gene02692:intron | 25.0% |
| !!! | TAAATTGCAATGGCTATTTT+AGG | - | chr3.3:86605427-86605446 | MS.gene02692:intron | 25.0% |
| !!! | TTCAATGTTTGTTTTACCAT+CGG | - | chr3.3:86605393-86605412 | MS.gene02692:intron | 25.0% |
| !!! | TTTTGAATTACAGTTTTGGA+CGG | - | chr3.3:86606167-86606186 | MS.gene02692:CDS | 25.0% |
| AAAATGTTCAGTATTAGCCA+TGG | + | chr3.3:86607607-86607626 | None:intergenic | 30.0% | |
| AACATACCTGTCGTATAAAA+TGG | + | chr3.3:86607816-86607835 | None:intergenic | 30.0% | |
| AAGATGATAAGTACTTTGCA+AGG | - | chr3.3:86606813-86606832 | MS.gene02692:CDS | 30.0% | |
| AAGCAATATCAACACACATT+TGG | + | chr3.3:86607678-86607697 | None:intergenic | 30.0% | |
| ACATCTTTATCGGATATTGA+AGG | - | chr3.3:86607901-86607920 | MS.gene02692:CDS | 30.0% | |
| AGAGAAAGAATGTTGTAGTT+AGG | + | chr3.3:86606564-86606583 | None:intergenic | 30.0% | |
| AGATACTAATATCAGGCTTA+GGG | + | chr3.3:86607416-86607435 | None:intergenic | 30.0% | |
| AGGAACAAACAATGAAATGA+TGG | + | chr3.3:86606948-86606967 | None:intergenic | 30.0% | |
| ATAAGATCATTGCATTTGCT+TGG | - | chr3.3:86607349-86607368 | MS.gene02692:intron | 30.0% | |
| ATTTCACGAAAAGCTCAAAA+TGG | + | chr3.3:86606537-86606556 | None:intergenic | 30.0% | |
| ATTTGGCAATATTATTGTCG+TGG | - | chr3.3:86605174-86605193 | MS.gene02692:CDS | 30.0% | |
| CGTTGACAAAAAATCTTTGA+AGG | - | chr3.3:86606883-86606902 | MS.gene02692:CDS | 30.0% | |
| GGAACAAACAATGAAATGAT+GGG | + | chr3.3:86606947-86606966 | None:intergenic | 30.0% | |
| GGATAACCAATATAAACATG+GGG | + | chr3.3:86607795-86607814 | None:intergenic | 30.0% | |
| TAAGATCATTGCATTTGCTT+GGG | - | chr3.3:86607350-86607369 | MS.gene02692:intron | 30.0% | |
| TACAACATTCTTTCTCTAGA+GGG | - | chr3.3:86606567-86606586 | MS.gene02692:CDS | 30.0% | |
| TACATCCAAAAGTCATTCTT+TGG | + | chr3.3:86607993-86608012 | None:intergenic | 30.0% | |
| TAGATAATATACCTTCCAGT+TGG | + | chr3.3:86607654-86607673 | None:intergenic | 30.0% | |
| TAGATACTAATATCAGGCTT+AGG | + | chr3.3:86607417-86607436 | None:intergenic | 30.0% | |
| TCAATGGCAAACATCTTTAT+CGG | - | chr3.3:86607891-86607910 | MS.gene02692:intron | 30.0% | |
| TCAGTTCATGAAATGGAAAA+TGG | - | chr3.3:86607851-86607870 | MS.gene02692:intron | 30.0% | |
| TGTAACTTCAGTTCATGAAA+TGG | - | chr3.3:86607844-86607863 | MS.gene02692:intron | 30.0% | |
| TTACAGCACGTTTATAAACA+GGG | + | chr3.3:86606056-86606075 | None:intergenic | 30.0% | |
| TTATGCAACTGATGTTGAAT+GGG | - | chr3.3:86607626-86607645 | MS.gene02692:intron | 30.0% | |
| TTGATGAGGTTAAATTGCAA+TGG | - | chr3.3:86605417-86605436 | MS.gene02692:intron | 30.0% | |
| TTTATGCAACTGATGTTGAA+TGG | - | chr3.3:86607625-86607644 | MS.gene02692:intron | 30.0% | |
| ! | AAAACTTTTACAGCCAACAA+TGG | + | chr3.3:86608059-86608078 | None:intergenic | 30.0% |
| ! | ATGGTCTTTATTTCTCTCAA+AGG | - | chr3.3:86605921-86605940 | MS.gene02692:CDS | 30.0% |
| !! | AAAAAAGGCTTTTGGAAACA+AGG | + | chr3.3:86608120-86608139 | None:intergenic | 30.0% |
| !! | AAAAAGGCTTTTGGAAACAA+GGG | + | chr3.3:86608119-86608138 | None:intergenic | 30.0% |
| !! | ACAAATATGATTGGTTTACG+TGG | - | chr3.3:86605795-86605814 | MS.gene02692:intron | 30.0% |
| !! | AGCATTGATTAATATACCTG+AGG | + | chr3.3:86605037-86605056 | None:intergenic | 30.0% |
| !! | CATAGATTTGCTGTTATTCA+TGG | - | chr3.3:86607384-86607403 | MS.gene02692:intron | 30.0% |
| !!! | AAGCTTATTGATTTTTCACC+TGG | - | chr3.3:86606429-86606448 | MS.gene02692:intron | 30.0% |
| !!! | TACAGCAATTTTTGGTTTGT+GGG | + | chr3.3:86608172-86608191 | None:intergenic | 30.0% |
| !!! | TGCATTTTTTTCTTTGCAGA+TGG | - | chr3.3:86606780-86606799 | MS.gene02692:intron | 30.0% |
| AAACAGAAATTTACCCTAGC+AGG | + | chr3.3:86606992-86607011 | None:intergenic | 35.0% | |
| AACATAGTGATTGAACGTTG+GGG | + | chr3.3:86605827-86605846 | None:intergenic | 35.0% | |
| AACATATTTGATGTGAGGAC+TGG | - | chr3.3:86606598-86606617 | MS.gene02692:CDS | 35.0% | |
| AACGATCAACATTAACAGCA+AGG | + | chr3.3:86607230-86607249 | None:intergenic | 35.0% | |
| ACTGATCCCCATGTTTATAT+TGG | - | chr3.3:86607786-86607805 | MS.gene02692:intron | 35.0% | |
| AGAACATAGTGATTGAACGT+TGG | + | chr3.3:86605829-86605848 | None:intergenic | 35.0% | |
| AGACCACCATATTAGGATTA+TGG | - | chr3.3:86605640-86605659 | MS.gene02692:CDS | 35.0% | |
| AGAGAGATGTACTTGAAAAC+AGG | + | chr3.3:86606703-86606722 | None:intergenic | 35.0% | |
| AGAGATATAATCATTACCCC+TGG | + | chr3.3:86605593-86605612 | None:intergenic | 35.0% | |
| ATTGAAGGATCACTTCTTTC+AGG | - | chr3.3:86607916-86607935 | MS.gene02692:CDS | 35.0% | |
| ATTGTACTAGCAGGATTGAA+AGG | - | chr3.3:86607537-86607556 | MS.gene02692:intron | 35.0% | |
| ATTTAACCTCATCAAACCGA+TGG | + | chr3.3:86605412-86605431 | None:intergenic | 35.0% | |
| CAAAGGAAAATCTGCAACAA+TGG | - | chr3.3:86605938-86605957 | MS.gene02692:CDS | 35.0% | |
| CATTACACATGACCATAGAA+GGG | + | chr3.3:86607020-86607039 | None:intergenic | 35.0% | |
| CATTGAAGTTGAGGAAATAG+TGG | - | chr3.3:86608517-86608536 | MS.gene02692:CDS | 35.0% | |
| CTACAACATTCTTTCTCTAG+AGG | - | chr3.3:86606566-86606585 | MS.gene02692:CDS | 35.0% | |
| CTTACAGCACGTTTATAAAC+AGG | + | chr3.3:86606057-86606076 | None:intergenic | 35.0% | |
| CTTTGGACCATTGTAATACA+CGG | + | chr3.3:86607976-86607995 | None:intergenic | 35.0% | |
| GAACATAGTGATTGAACGTT+GGG | + | chr3.3:86605828-86605847 | None:intergenic | 35.0% | |
| GACCACCATATTAGGATTAT+GGG | - | chr3.3:86605641-86605660 | MS.gene02692:CDS | 35.0% | |
| GATAAGTACTTTGCAAGGAT+GGG | - | chr3.3:86606818-86606837 | MS.gene02692:CDS | 35.0% | |
| GTATGTCACGTTCCTTTATA+CGG | + | chr3.3:86607296-86607315 | None:intergenic | 35.0% | |
| TAGGGTCTTGAAAGAAGATT+GGG | - | chr3.3:86608385-86608404 | MS.gene02692:intron | 35.0% | |
| TGACATACCTATTGAAGTTC+TGG | - | chr3.3:86607308-86607327 | MS.gene02692:intron | 35.0% | |
| TGACGATGATGTTATTCAAG+AGG | - | chr3.3:86605129-86605148 | MS.gene02692:CDS | 35.0% | |
| TGATAAGTACTTTGCAAGGA+TGG | - | chr3.3:86606817-86606836 | MS.gene02692:CDS | 35.0% | |
| TGTTATTCAAGAGGAGAATC+TGG | - | chr3.3:86605138-86605157 | MS.gene02692:CDS | 35.0% | |
| TTATCCATGATCTTCAACCT+TGG | + | chr3.3:86607702-86607721 | None:intergenic | 35.0% | |
| TTGTAATTCTACAAGGAGTG+TGG | + | chr3.3:86605779-86605798 | None:intergenic | 35.0% | |
| TTTGTACAATGGTCACCTTT+GGG | - | chr3.3:86606195-86606214 | MS.gene02692:CDS | 35.0% | |
| ! | AATGAAATGATGGGATCAGT+TGG | + | chr3.3:86606938-86606957 | None:intergenic | 35.0% |
| ! | ACAAAGAAAAGCACATTCAC+AGG | - | chr3.3:86607258-86607277 | MS.gene02692:CDS | 35.0% |
| ! | AGCTACTGAAAAAAGGCTTT+TGG | + | chr3.3:86608128-86608147 | None:intergenic | 35.0% |
| ! | ATGGTCCAAAGAATGACTTT+TGG | - | chr3.3:86607985-86608004 | MS.gene02692:CDS | 35.0% |
| ! | CTTTGAGCTTTTCCGTATAA+AGG | - | chr3.3:86607281-86607300 | MS.gene02692:CDS | 35.0% |
| ! | GAATGTGCTTTTCTTTGTCT+TGG | + | chr3.3:86607256-86607275 | None:intergenic | 35.0% |
| ! | GGCAATTTCATGTTTTCTCA+TGG | - | chr3.3:86605752-86605771 | MS.gene02692:intron | 35.0% |
| ! | GGTTATCCATTTTATACGAC+AGG | - | chr3.3:86607807-86607826 | MS.gene02692:intron | 35.0% |
| ! | TCATTTGAGACCACCATATT+AGG | - | chr3.3:86605633-86605652 | MS.gene02692:CDS | 35.0% |
| ! | TGTGTTGATATTGCTTACCA+AGG | - | chr3.3:86607682-86607701 | MS.gene02692:intron | 35.0% |
| ! | TTTTCAGTAGAAGGATCAAC+AGG | + | chr3.3:86605304-86605323 | None:intergenic | 35.0% |
| ! | TTTTGTACAATGGTCACCTT+TGG | - | chr3.3:86606194-86606213 | MS.gene02692:CDS | 35.0% |
| !! | AAGTGGTGCCTATTTGTTTT+TGG | + | chr3.3:86605688-86605707 | None:intergenic | 35.0% |
| !! | ATTGGTGCTATTAAAGAGGA+TGG | - | chr3.3:86605268-86605287 | MS.gene02692:intron | 35.0% |
| !! | TCAGATTGGTGCTATTAAAG+AGG | - | chr3.3:86605264-86605283 | MS.gene02692:intron | 35.0% |
| !! | TCTGTTCTTGATGGATTTGT+AGG | - | chr3.3:86607107-86607126 | MS.gene02692:intron | 35.0% |
| !!! | AGTGCTGATGATTTTGCTAT+CGG | - | chr3.3:86606646-86606665 | MS.gene02692:CDS | 35.0% |
| !!! | GTACAGCAATTTTTGGTTTG+TGG | + | chr3.3:86608173-86608192 | None:intergenic | 35.0% |
| !!! | TTTTTTCTTTGCAGATGGAG+TGG | - | chr3.3:86606785-86606804 | MS.gene02692:CDS | 35.0% |
| AAACAAGGAATATGCTCCAG+GGG | - | chr3.3:86605574-86605593 | MS.gene02692:CDS | 40.0% | |
| AAGCTTCTCGAATTTCTCCT+TGG | + | chr3.3:86605218-86605237 | None:intergenic | 40.0% | |
| AATGGAATCGAGATCGATAG+AGG | + | chr3.3:86604985-86605004 | None:intergenic | 40.0% | |
| AATTTCTCCTTGGGAACAAC+AGG | + | chr3.3:86605208-86605227 | None:intergenic | 40.0% | |
| ACAATGGCTTACTGATGCTA+AGG | - | chr3.3:86605954-86605973 | MS.gene02692:CDS | 40.0% | |
| ACAGCAAATCTATGTCCCTT+TGG | + | chr3.3:86607378-86607397 | None:intergenic | 40.0% | |
| AGCACGTTTATAAACAGGGT+CGG | + | chr3.3:86606052-86606071 | None:intergenic | 40.0% | |
| AGCTTCTCGAATTTCTCCTT+GGG | + | chr3.3:86605217-86605236 | None:intergenic | 40.0% | |
| ATGAAGAAGAGAAGCTAGAG+AGG | - | chr3.3:86608438-86608457 | MS.gene02692:intron | 40.0% | |
| ATGCAACAGCTTCCATTCAT+TGG | + | chr3.3:86608420-86608439 | None:intergenic | 40.0% | |
| CAAACAAGGAATATGCTCCA+GGG | - | chr3.3:86605573-86605592 | MS.gene02692:CDS | 40.0% | |
| CATCGTCATCACTACATACA+TGG | + | chr3.3:86605117-86605136 | None:intergenic | 40.0% | |
| CATTGAGTACAATACTCCTC+AGG | - | chr3.3:86605342-86605361 | MS.gene02692:intron | 40.0% | |
| CCATTACACATGACCATAGA+AGG | + | chr3.3:86607021-86607040 | None:intergenic | 40.0% | |
| CCTTCTACTGAAAAGTCCTT+GGG | - | chr3.3:86605310-86605329 | MS.gene02692:intron | 40.0% | |
| CCTTCTATGGTCATGTGTAA+TGG | - | chr3.3:86607018-86607037 | MS.gene02692:CDS | 40.0% | |
| CTATTAAAGAGGATGGTCTC+TGG | - | chr3.3:86605275-86605294 | MS.gene02692:intron | 40.0% | |
| CTCAACTTGAAGGATCTCTT+TGG | + | chr3.3:86608549-86608568 | None:intergenic | 40.0% | |
| CTCCCATAATCCTAATATGG+TGG | + | chr3.3:86605646-86605665 | None:intergenic | 40.0% | |
| CTGGAGTTTGATTCTGGATT+TGG | - | chr3.3:86605157-86605176 | MS.gene02692:CDS | 40.0% | |
| CTTACCAAGGTTGAAGATCA+TGG | - | chr3.3:86607695-86607714 | MS.gene02692:intron | 40.0% | |
| CTTGCTAAAGAGAAGACTCA+AGG | - | chr3.3:86605458-86605477 | MS.gene02692:intron | 40.0% | |
| GAAAGAAGATTGGGACAAGT+GGG | - | chr3.3:86608394-86608413 | MS.gene02692:intron | 40.0% | |
| GAAGACAAAGCTTTGCTTCT+CGG | - | chr3.3:86604948-86604967 | MS.gene02692:CDS | 40.0% | |
| GAAGACTCAAGGATACAAAC+TGG | - | chr3.3:86605469-86605488 | MS.gene02692:intron | 40.0% | |
| GCAGGATTGAAAGGTTTCAA+TGG | - | chr3.3:86607546-86607565 | MS.gene02692:intron | 40.0% | |
| GGTCTCCCATAATCCTAATA+TGG | + | chr3.3:86605649-86605668 | None:intergenic | 40.0% | |
| GTAGGGTCTTGAAAGAAGAT+TGG | - | chr3.3:86608384-86608403 | MS.gene02692:intron | 40.0% | |
| GTTACCAAATACTTCTCACC+AGG | + | chr3.3:86606450-86606469 | None:intergenic | 40.0% | |
| TAATCTACCTGTTGTTCCCA+AGG | - | chr3.3:86605198-86605217 | MS.gene02692:CDS | 40.0% | |
| TAGTATCTACTCTATGCGGA+CGG | - | chr3.3:86607428-86607447 | MS.gene02692:CDS | 40.0% | |
| TCAAAGCTCACTACTCTGAA+AGG | - | chr3.3:86607471-86607490 | MS.gene02692:CDS | 40.0% | |
| TCAGCAGCAATGAAACATCT+TGG | + | chr3.3:86608343-86608362 | None:intergenic | 40.0% | |
| TCATTGTTTGTTCCTGAGAC+AGG | - | chr3.3:86606953-86606972 | MS.gene02692:intron | 40.0% | |
| TCCTTCTACTGAAAAGTCCT+TGG | - | chr3.3:86605309-86605328 | MS.gene02692:intron | 40.0% | |
| TGAAAGAAGATTGGGACAAG+TGG | - | chr3.3:86608393-86608412 | MS.gene02692:intron | 40.0% | |
| TGAAGAAGAGAAGCTAGAGA+GGG | - | chr3.3:86608439-86608458 | MS.gene02692:intron | 40.0% | |
| TGGGATTGTGAATCCATTGT+TGG | - | chr3.3:86608043-86608062 | MS.gene02692:intron | 40.0% | |
| TTCCTCAACTTCAATGTCCT+TGG | + | chr3.3:86608513-86608532 | None:intergenic | 40.0% | |
| ! | GAGAATCTGGAGTTTGATTC+TGG | - | chr3.3:86605151-86605170 | MS.gene02692:CDS | 40.0% |
| ! | GTTCAGATACTGAGGTTTTG+TGG | - | chr3.3:86606004-86606023 | MS.gene02692:CDS | 40.0% |
| ! | TCTGTTTTCCTTCCCTTCTA+TGG | - | chr3.3:86607005-86607024 | MS.gene02692:CDS | 40.0% |
| ! | TGTTGATGAGCTTGAAACCA+TGG | - | chr3.3:86607587-86607606 | MS.gene02692:intron | 40.0% |
| !! | CAAAGAGATCCTTCAAGTTG+AGG | - | chr3.3:86608547-86608566 | MS.gene02692:CDS | 40.0% |
| !! | GAAAGGTTTCAATGGACTGT+TGG | - | chr3.3:86607554-86607573 | MS.gene02692:intron | 40.0% |
| !! | GAGTAGTGAGCTTTGAAACT+CGG | + | chr3.3:86607467-86607486 | None:intergenic | 40.0% |
| !! | TTCACCTGGTGAGAAGTATT+TGG | - | chr3.3:86606443-86606462 | MS.gene02692:intron | 40.0% |
| !!! | AGCAGGCAAATGCTTTGTTT+TGG | - | chr3.3:86607496-86607515 | MS.gene02692:CDS | 40.0% |
| !!! | GTTTTACCATCGGTTTGATG+AGG | - | chr3.3:86605403-86605422 | MS.gene02692:intron | 40.0% |
| AACCAGCACGAATCACAAAC+TGG | + | chr3.3:86605987-86606006 | None:intergenic | 45.0% | |
| ACACATGACCATAGAAGGGA+AGG | + | chr3.3:86607016-86607035 | None:intergenic | 45.0% | |
| ACACTCACATTAGCATCTCG+AGG | + | chr3.3:86606498-86606517 | None:intergenic | 45.0% | |
| AGAAATTTACCCTAGCAGGC+TGG | + | chr3.3:86606988-86607007 | None:intergenic | 45.0% | |
| AGAAGCTAGTGATGAGGAAG+AGG | - | chr3.3:86608478-86608497 | MS.gene02692:CDS | 45.0% | |
| AGCCAAGGACATTGAAGTTG+AGG | - | chr3.3:86608508-86608527 | MS.gene02692:CDS | 45.0% | |
| AGCTAGAGAGGGAAAATCTG+AGG | - | chr3.3:86608450-86608469 | MS.gene02692:intron | 45.0% | |
| CCAAACAAGGAATATGCTCC+AGG | - | chr3.3:86605572-86605591 | MS.gene02692:CDS | 45.0% | |
| CCTGGAGCATATTCCTTGTT+TGG | + | chr3.3:86605575-86605594 | None:intergenic | 45.0% | |
| CTCAATGAAGCAGTAACCCA+AGG | + | chr3.3:86605329-86605348 | None:intergenic | 45.0% | |
| CTCTTTCTTGACTGCTGAGA+AGG | - | chr3.3:86608262-86608281 | MS.gene02692:CDS | 45.0% | |
| CTTCTCAGCAGTCAAGAAAG+AGG | + | chr3.3:86608264-86608283 | None:intergenic | 45.0% | |
| GATGTTGAATGGGATCCAAC+TGG | - | chr3.3:86607636-86607655 | MS.gene02692:intron | 45.0% | |
| GCACGTTTATAAACAGGGTC+GGG | + | chr3.3:86606051-86606070 | None:intergenic | 45.0% | |
| GCTAGAGAGGGAAAATCTGA+GGG | - | chr3.3:86608451-86608470 | MS.gene02692:intron | 45.0% | |
| GGAAGAGGAATATGAAGCCA+AGG | - | chr3.3:86608493-86608512 | MS.gene02692:CDS | 45.0% | |
| GTAACGCATGAGACGATTGA+AGG | + | chr3.3:86606277-86606296 | None:intergenic | 45.0% | |
| GTCACCTTTGGGTACTTACT+TGG | - | chr3.3:86606206-86606225 | MS.gene02692:CDS | 45.0% | |
| GTTGCCAAGTAAGTACCCAA+AGG | + | chr3.3:86606213-86606232 | None:intergenic | 45.0% | |
| TCAGTGACTGCAAGATGTAC+TGG | - | chr3.3:86607187-86607206 | MS.gene02692:CDS | 45.0% | |
| TCGAGCTCCAGAACTTCAAT+AGG | + | chr3.3:86607318-86607337 | None:intergenic | 45.0% | |
| TGCCTGAGTTCTTCTTTGCT+GGG | + | chr3.3:86607150-86607169 | None:intergenic | 45.0% | |
| TTAGCATCTCGAGGATTGCT+TGG | + | chr3.3:86606489-86606508 | None:intergenic | 45.0% | |
| TTGAATGGGATCCAACTGGA+AGG | - | chr3.3:86607640-86607659 | MS.gene02692:intron | 45.0% | |
| TTGCCTGAGTTCTTCTTTGC+TGG | + | chr3.3:86607151-86607170 | None:intergenic | 45.0% | |
| TTGTTTGTTCCTGAGACAGG+AGG | - | chr3.3:86606956-86606975 | MS.gene02692:intron | 45.0% | |
| TTTCTTGACTGCTGAGAAGG+AGG | - | chr3.3:86608265-86608284 | MS.gene02692:CDS | 45.0% | |
| TTTCTTTGCAGATGGAGTGG+TGG | - | chr3.3:86606788-86606807 | MS.gene02692:CDS | 45.0% | |
| ! | AAGATGTACTGGCAGAGCAA+TGG | - | chr3.3:86607198-86607217 | MS.gene02692:CDS | 45.0% |
| ! | CCCAAGGACTTTTCAGTAGA+AGG | + | chr3.3:86605313-86605332 | None:intergenic | 45.0% |
| ! | GCATATTCCTTGTTTGGAGG+AGG | + | chr3.3:86605569-86605588 | None:intergenic | 45.0% |
| ! | GGAGCATATTCCTTGTTTGG+AGG | + | chr3.3:86605572-86605591 | None:intergenic | 45.0% |
| !! | GATTTTGCTATCGGAGGTAC+TGG | - | chr3.3:86606655-86606674 | MS.gene02692:CDS | 45.0% |
| !! | GCTGATGATTTTGCTATCGG+AGG | - | chr3.3:86606649-86606668 | MS.gene02692:CDS | 45.0% |
| !! | GGACGGAGAGTTTTGTACAA+TGG | - | chr3.3:86606184-86606203 | MS.gene02692:CDS | 45.0% |
| ACAACCAAGTAGCACGCAAG+TGG | + | chr3.3:86605705-86605724 | None:intergenic | 50.0% | |
| ACGCATGAGACGATTGAAGG+TGG | + | chr3.3:86606274-86606293 | None:intergenic | 50.0% | |
| AGTACAATGAAGCGACCTGC+TGG | + | chr3.3:86607525-86607544 | None:intergenic | 50.0% | |
| CTCGAGGATTGCTTGGTTCA+TGG | + | chr3.3:86606482-86606501 | None:intergenic | 50.0% | |
| GACCAGTTTGTGATTCGTGC+TGG | - | chr3.3:86605982-86606001 | MS.gene02692:CDS | 50.0% | |
| GAGAGGGAAAATCTGAGGGA+CGG | - | chr3.3:86608455-86608474 | MS.gene02692:intron | 50.0% | |
| GATTCCATTCACCTTCCTCC+AGG | - | chr3.3:86604996-86605015 | MS.gene02692:CDS | 50.0% | |
| GCATTTGCTTGGGAGCCAAA+GGG | - | chr3.3:86607360-86607379 | MS.gene02692:intron | 50.0% | |
| GCCTGAGTTCTTCTTTGCTG+GGG | + | chr3.3:86607149-86607168 | None:intergenic | 50.0% | |
| GGTCGCTTCATTGTACTAGC+AGG | - | chr3.3:86607528-86607547 | MS.gene02692:CDS | 50.0% | |
| TCAGCAGTCAAGAAAGAGGC+TGG | + | chr3.3:86608260-86608279 | None:intergenic | 50.0% | |
| TCCCCAGCAAAGAAGAACTC+AGG | - | chr3.3:86607145-86607164 | MS.gene02692:intron | 50.0% | |
| TGCATTTGCTTGGGAGCCAA+AGG | - | chr3.3:86607359-86607378 | MS.gene02692:intron | 50.0% | |
| TTGGCAACAGTTCACCGTCA+GGG | - | chr3.3:86606225-86606244 | MS.gene02692:CDS | 50.0% | |
| TTTGTTCCTGAGACAGGAGG+TGG | - | chr3.3:86606959-86606978 | MS.gene02692:intron | 50.0% | |
| ! | AACAAGAGCGTGAGAAGCGT+AGG | - | chr3.3:86608366-86608385 | MS.gene02692:intron | 50.0% |
| ! | ACAAGAGCGTGAGAAGCGTA+GGG | - | chr3.3:86608367-86608386 | MS.gene02692:intron | 50.0% |
| ! | AGTCAAGAAAGAGGCTGGTC+TGG | + | chr3.3:86608255-86608274 | None:intergenic | 50.0% |
| ! | CACTACTCTGAAAGGCAAGC+AGG | - | chr3.3:86607479-86607498 | MS.gene02692:CDS | 50.0% |
| !! | CATGAAAGTGCCAGACGAGT+GGG | - | chr3.3:86605541-86605560 | MS.gene02692:intron | 50.0% |
| !! | GTCAAGAAAGAGGCTGGTCT+GGG | + | chr3.3:86608254-86608273 | None:intergenic | 50.0% |
| !! | TCATGAAAGTGCCAGACGAG+TGG | - | chr3.3:86605540-86605559 | MS.gene02692:intron | 50.0% |
| !! | TCGTGCTGGTTCAGATACTG+AGG | - | chr3.3:86605996-86606015 | MS.gene02692:CDS | 50.0% |
| !! | TTTGCTATCGGAGGTACTGG+AGG | - | chr3.3:86606658-86606677 | MS.gene02692:CDS | 50.0% |
| !!! | GCTTTGTTTTGGTCACCAGC+AGG | - | chr3.3:86607507-86607526 | MS.gene02692:CDS | 50.0% |
| AGGATTCCGCAGTTGTCACC+TGG | + | chr3.3:86605017-86605036 | None:intergenic | 55.0% | |
| AGGTGGTAACCAGCCTGCTA+GGG | - | chr3.3:86606976-86606995 | MS.gene02692:intron | 55.0% | |
| ATTCCGCAGTTGTCACCTGG+AGG | + | chr3.3:86605014-86605033 | None:intergenic | 55.0% | |
| CATGCGTTACGCACATCCTC+AGG | - | chr3.3:86606287-86606306 | MS.gene02692:CDS | 55.0% | |
| CTTCCTCCAGGTGACAACTG+CGG | - | chr3.3:86605008-86605027 | MS.gene02692:CDS | 55.0% | |
| CTTGGCAACAGTTCACCGTC+AGG | - | chr3.3:86606224-86606243 | MS.gene02692:CDS | 55.0% | |
| GGACGGAGAAGCTAGTGATG+AGG | - | chr3.3:86608472-86608491 | MS.gene02692:CDS | 55.0% | |
| GGGACAAGTGGGCCAATGAA+TGG | - | chr3.3:86608405-86608424 | MS.gene02692:intron | 55.0% | |
| GTCACCTGGAGGAAGGTGAA+TGG | + | chr3.3:86605003-86605022 | None:intergenic | 55.0% | |
| GTGACAACTGCGGAATCCTC+AGG | - | chr3.3:86605018-86605037 | MS.gene02692:CDS | 55.0% | |
| TGGCAACAGTTCACCGTCAG+GGG | - | chr3.3:86606226-86606245 | MS.gene02692:CDS | 55.0% | |
| TGGTTACCACCTCCTGTCTC+AGG | + | chr3.3:86606968-86606987 | None:intergenic | 55.0% | |
| !! | GAGGTGTCACTGGAGTGTCA+TGG | - | chr3.3:86606677-86606696 | MS.gene02692:CDS | 55.0% |
| ATGCGGACGGCTCAGAACAC+TGG | - | chr3.3:86607441-86607460 | MS.gene02692:CDS | 60.0% | |
| CGCAGTTGTCACCTGGAGGA+AGG | + | chr3.3:86605010-86605029 | None:intergenic | 60.0% | |
| GAGGTGGTAACCAGCCTGCT+AGG | - | chr3.3:86606975-86606994 | MS.gene02692:intron | 60.0% | |
| GGCAACAGTTCACCGTCAGG+GGG | - | chr3.3:86606227-86606246 | MS.gene02692:CDS | 60.0% | |
| GTGGGCTCCTCCTCCAAACA+AGG | - | chr3.3:86605559-86605578 | MS.gene02692:CDS | 60.0% | |
| ! | GGCACCACTTGCGTGCTACT+TGG | - | chr3.3:86605698-86605717 | MS.gene02692:intron | 60.0% |
| !! | GGAGGTACTGGAGGTGTCAC+TGG | - | chr3.3:86606667-86606686 | MS.gene02692:CDS | 60.0% |
| ACCGTCAGGGGGCAGCAGTT+TGG | - | chr3.3:86606238-86606257 | MS.gene02692:CDS | 65.0% | |
| CCCAAACTGCTGCCCCCTGA+CGG | + | chr3.3:86606242-86606261 | None:intergenic | 65.0% | |
| CCGTCAGGGGGCAGCAGTTT+GGG | - | chr3.3:86606239-86606258 | MS.gene02692:CDS | 65.0% | |
| CGTCAGGGGGCAGCAGTTTG+GGG | - | chr3.3:86606240-86606259 | MS.gene02692:CDS | 65.0% | |
| CAGGGGGCAGCAGTTTGGGG+AGG | - | chr3.3:86606243-86606262 | MS.gene02692:CDS | 70.0% | |
| GGAGGAGGAGCCCACTCGTC+TGG | + | chr3.3:86605554-86605573 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 86604918 | 86608577 | 86604918 | ID=MS.gene02692 |
| chr3.3 | mRNA | 86604918 | 86608577 | 86604918 | ID=MS.gene02692.t1;Parent=MS.gene02692 |
| chr3.3 | exon | 86608456 | 86608577 | 86608456 | ID=MS.gene02692.t1.exon1;Parent=MS.gene02692.t1 |
| chr3.3 | CDS | 86608456 | 86608577 | 86608456 | ID=cds.MS.gene02692.t1;Parent=MS.gene02692.t1 |
| chr3.3 | exon | 86608132 | 86608369 | 86608132 | ID=MS.gene02692.t1.exon2;Parent=MS.gene02692.t1 |
| chr3.3 | CDS | 86608132 | 86608369 | 86608132 | ID=cds.MS.gene02692.t1;Parent=MS.gene02692.t1 |
| chr3.3 | exon | 86607900 | 86608046 | 86607900 | ID=MS.gene02692.t1.exon3;Parent=MS.gene02692.t1 |
| chr3.3 | CDS | 86607900 | 86608046 | 86607900 | ID=cds.MS.gene02692.t1;Parent=MS.gene02692.t1 |
| chr3.3 | exon | 86607424 | 86607552 | 86607424 | ID=MS.gene02692.t1.exon4;Parent=MS.gene02692.t1 |
| chr3.3 | CDS | 86607424 | 86607552 | 86607424 | ID=cds.MS.gene02692.t1;Parent=MS.gene02692.t1 |
| chr3.3 | exon | 86607187 | 86607315 | 86607187 | ID=MS.gene02692.t1.exon5;Parent=MS.gene02692.t1 |
| chr3.3 | CDS | 86607187 | 86607315 | 86607187 | ID=cds.MS.gene02692.t1;Parent=MS.gene02692.t1 |
| chr3.3 | exon | 86606986 | 86607069 | 86606986 | ID=MS.gene02692.t1.exon6;Parent=MS.gene02692.t1 |
| chr3.3 | CDS | 86606986 | 86607069 | 86606986 | ID=cds.MS.gene02692.t1;Parent=MS.gene02692.t1 |
| chr3.3 | exon | 86606785 | 86606909 | 86606785 | ID=MS.gene02692.t1.exon7;Parent=MS.gene02692.t1 |
| chr3.3 | CDS | 86606785 | 86606909 | 86606785 | ID=cds.MS.gene02692.t1;Parent=MS.gene02692.t1 |
| chr3.3 | exon | 86606498 | 86606696 | 86606498 | ID=MS.gene02692.t1.exon8;Parent=MS.gene02692.t1 |
| chr3.3 | CDS | 86606498 | 86606696 | 86606498 | ID=cds.MS.gene02692.t1;Parent=MS.gene02692.t1 |
| chr3.3 | exon | 86605834 | 86606366 | 86605834 | ID=MS.gene02692.t1.exon9;Parent=MS.gene02692.t1 |
| chr3.3 | CDS | 86605834 | 86606366 | 86605834 | ID=cds.MS.gene02692.t1;Parent=MS.gene02692.t1 |
| chr3.3 | exon | 86605558 | 86605666 | 86605558 | ID=MS.gene02692.t1.exon10;Parent=MS.gene02692.t1 |
| chr3.3 | CDS | 86605558 | 86605666 | 86605558 | ID=cds.MS.gene02692.t1;Parent=MS.gene02692.t1 |
| chr3.3 | exon | 86604918 | 86605256 | 86604918 | ID=MS.gene02692.t1.exon11;Parent=MS.gene02692.t1 |
| chr3.3 | CDS | 86604918 | 86605256 | 86604918 | ID=cds.MS.gene02692.t1;Parent=MS.gene02692.t1 |
| Gene Sequence |
| Protein sequence |
