Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015254.t1 | XP_003611587.1 | 100 | 276 | 0 | 0 | 1 | 276 | 1 | 276 | 3.80E-147 | 530.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015254.t1 | Q9FJX3 | 66.3 | 276 | 93 | 0 | 1 | 276 | 1 | 276 | 6.2e-106 | 385.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015254.t1 | G7K2J4 | 100.0 | 276 | 0 | 0 | 1 | 276 | 1 | 276 | 2.7e-147 | 530.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene015254 | MS.gene030985 | PPI |
| MS.gene74761 | MS.gene015254 | PPI |
| MS.gene043298 | MS.gene015254 | PPI |
| MS.gene021652 | MS.gene015254 | PPI |
| MS.gene015254 | MS.gene20480 | PPI |
| MS.gene015254 | MS.gene79650 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015254.t1 | MTR_5g015580 | 100.000 | 276 | 0 | 0 | 1 | 276 | 1 | 276 | 0.0 | 546 |
| MS.gene015254.t1 | MTR_1g018205 | 56.727 | 275 | 119 | 0 | 2 | 276 | 3 | 277 | 5.49e-111 | 322 |
| MS.gene015254.t1 | MTR_6g011390 | 49.281 | 278 | 139 | 1 | 1 | 276 | 1 | 278 | 2.21e-92 | 275 |
| MS.gene015254.t1 | MTR_7g009330 | 50.182 | 275 | 137 | 0 | 2 | 276 | 3 | 277 | 4.15e-91 | 271 |
| MS.gene015254.t1 | MTR_8g469150 | 41.304 | 276 | 162 | 0 | 1 | 276 | 1 | 276 | 2.64e-76 | 233 |
| MS.gene015254.t1 | MTR_4g128300 | 42.652 | 279 | 157 | 2 | 1 | 276 | 1 | 279 | 1.45e-74 | 229 |
| MS.gene015254.t1 | MTR_8g469150 | 40.075 | 267 | 160 | 0 | 1 | 267 | 1 | 267 | 8.15e-71 | 219 |
| MS.gene015254.t1 | MTR_4g107840 | 26.148 | 283 | 163 | 5 | 1 | 276 | 1 | 244 | 1.59e-28 | 109 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015254.t1 | AT5G67500 | 66.304 | 276 | 93 | 0 | 1 | 276 | 1 | 276 | 3.23e-140 | 395 |
| MS.gene015254.t1 | AT5G67500 | 60.396 | 303 | 93 | 1 | 1 | 276 | 1 | 303 | 2.19e-134 | 382 |
| MS.gene015254.t1 | AT5G67500 | 65.918 | 267 | 91 | 0 | 1 | 267 | 1 | 267 | 4.39e-134 | 381 |
| MS.gene015254.t1 | AT5G15090 | 50.000 | 278 | 133 | 2 | 1 | 276 | 1 | 274 | 9.60e-90 | 268 |
| MS.gene015254.t1 | AT5G15090 | 50.000 | 278 | 133 | 2 | 1 | 276 | 1 | 274 | 9.60e-90 | 268 |
| MS.gene015254.t1 | AT3G01280 | 48.551 | 276 | 142 | 0 | 1 | 276 | 1 | 276 | 5.78e-88 | 263 |
| MS.gene015254.t1 | AT5G57490 | 46.377 | 276 | 146 | 1 | 1 | 276 | 1 | 274 | 1.07e-83 | 252 |
| MS.gene015254.t1 | AT3G49920 | 47.826 | 276 | 94 | 3 | 1 | 276 | 1 | 226 | 3.86e-81 | 244 |
| MS.gene015254.t1 | AT3G49920 | 64.634 | 82 | 29 | 0 | 1 | 82 | 1 | 82 | 1.73e-28 | 106 |
| MS.gene015254.t1 | AT3G49920 | 64.634 | 82 | 29 | 0 | 1 | 82 | 1 | 82 | 1.73e-28 | 106 |
| MS.gene015254.t1 | AT3G49920 | 67.123 | 73 | 24 | 0 | 1 | 73 | 1 | 73 | 3.01e-28 | 104 |
Find 74 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGGATTAGTTTCACGAAAT+TGG | 0.171691 | 5.4:-9144660 | MS.gene015254:CDS |
| AAGTCAGTGCTGACTATTTC+TGG | 0.215709 | 5.4:-9144305 | MS.gene015254:CDS |
| TCTTCTTGATTTGGTCTAGA+TGG | 0.272788 | 5.4:+9144483 | None:intergenic |
| CAGCAGCACTCTTCTTGATT+TGG | 0.283867 | 5.4:+9144474 | None:intergenic |
| AAGCTGCCTGATTATAGTTC+TGG | 0.319469 | 5.4:-9144935 | MS.gene015254:CDS |
| CCGGGTCTCTACTCCGATAT+TGG | 0.330823 | 5.4:-9148656 | MS.gene015254:CDS |
| AAGAAAGGAGGACTCTCAAC+TGG | 0.374633 | 5.4:-9145164 | MS.gene015254:CDS |
| TTTGGCTTTCTTGCCAATAT+CGG | 0.377017 | 5.4:+9148643 | None:intergenic |
| TCGTCTTTGTGGATGGAAAA+AGG | 0.380002 | 5.4:+9144969 | None:intergenic |
| TCTGATTTGTTGAGAACCTT+CGG | 0.383141 | 5.4:+9144438 | None:intergenic |
| GGTTCTCCAACCCTTGCATT+TGG | 0.392286 | 5.4:-9144734 | MS.gene015254:CDS |
| AATTGAAGCTATCGTCTTTG+TGG | 0.392722 | 5.4:+9144958 | None:intergenic |
| GTGGCAGAAACATCAAAGAT+AGG | 0.400234 | 5.4:+9144761 | None:intergenic |
| CTGATTTGTTGAGAACCTTC+GGG | 0.400674 | 5.4:+9144439 | None:intergenic |
| CAGTGTAGCGACTGAGGTTA+AGG | 0.410879 | 5.4:+9144793 | None:intergenic |
| GAAATAGTCAGCACTGACTT+TGG | 0.413358 | 5.4:+9144308 | None:intergenic |
| AAATAGTCAGCACTGACTTT+GGG | 0.425846 | 5.4:+9144309 | None:intergenic |
| AGCAATGGCCAACCCAAACT+TGG | 0.435980 | 5.4:+9144250 | None:intergenic |
| CTTGCATTTGGTGCTGAGGC+AGG | 0.440987 | 5.4:-9144722 | MS.gene015254:CDS |
| ACTTCAACTGCTTTGAAGAA+AGG | 0.441282 | 5.4:-9145179 | MS.gene015254:CDS |
| AACAAATCAGAACACTATTA+CGG | 0.464512 | 5.4:-9144426 | MS.gene015254:CDS |
| GTTTCATCTTACAGCACTAC+TGG | 0.464789 | 5.4:-9148501 | MS.gene015254:CDS |
| TCAACAATCAAGGAAAGGTT+GGG | 0.467034 | 5.4:-9144355 | MS.gene015254:CDS |
| GCAGGCTATGATACTAAATC+TGG | 0.479364 | 5.4:-9144704 | MS.gene015254:CDS |
| ATCGAAGATGAGCAAGGGAC+CGG | 0.481251 | 5.4:-9148675 | None:intergenic |
| TCTTGATTTGGTCTAGATGG+TGG | 0.484846 | 5.4:+9144486 | None:intergenic |
| TTTGATGTTTCTGCCACTGT+TGG | 0.487886 | 5.4:-9144755 | MS.gene015254:CDS |
| TGGCAGAAACATCAAAGATA+GGG | 0.491347 | 5.4:+9144762 | None:intergenic |
| AACCCTTGCATTTGGTGCTG+AGG | 0.491987 | 5.4:-9144726 | MS.gene015254:CDS |
| TTCAACAATCAAGGAAAGGT+TGG | 0.493974 | 5.4:-9144356 | MS.gene015254:CDS |
| AGGACTCTCAACTGGGGATG+TGG | 0.494637 | 5.4:-9145156 | MS.gene015254:CDS |
| CTTTCCTATCAGTGGCGACA+AGG | 0.504369 | 5.4:-9144534 | MS.gene015254:intron |
| AAAGCTAGGTTCAACAATCA+AGG | 0.508554 | 5.4:-9144365 | MS.gene015254:CDS |
| CTCTCAACTGGGGATGTGGC+AGG | 0.509688 | 5.4:-9145152 | MS.gene015254:CDS |
| CAAGAAGAGTGCTGCTGTTG+TGG | 0.509776 | 5.4:-9144468 | MS.gene015254:CDS |
| ACCTTGCCAGAACTATAATC+AGG | 0.517672 | 5.4:+9144929 | None:intergenic |
| AGTAGTGCTGTAAGATGAAA+CGG | 0.520738 | 5.4:+9148503 | None:intergenic |
| TGATTTGGTCTAGATGGTGG+AGG | 0.521733 | 5.4:+9144489 | None:intergenic |
| GAAGCTATCGTCTTTGTGGA+TGG | 0.527003 | 5.4:+9144962 | None:intergenic |
| TGAGGTTGATACCAAGGCCC+TGG | 0.529736 | 5.4:-9144282 | MS.gene015254:CDS |
| CAGAACACTATTACGGTTGG+AGG | 0.533154 | 5.4:-9144419 | MS.gene015254:CDS |
| TTGGGAAGAGCTCGTGCTGT+AGG | 0.540312 | 5.4:+9144327 | None:intergenic |
| TCTAAAATCGAAGATGAGCA+AGG | 0.548154 | 5.4:-9148681 | None:intergenic |
| CTGCCTCAGCACCAAATGCA+AGG | 0.548233 | 5.4:+9144723 | None:intergenic |
| AATCAGAACACTATTACGGT+TGG | 0.550635 | 5.4:-9144422 | MS.gene015254:CDS |
| AGGTTAAGGTAGCATGGTCG+TGG | 0.557344 | 5.4:+9144807 | None:intergenic |
| TCAGCACCAAATGCAAGGGT+TGG | 0.562271 | 5.4:+9144728 | None:intergenic |
| CCAATATCGGAGTAGAGACC+CGG | 0.566055 | 5.4:+9148656 | None:intergenic |
| GCAATGGCCAACCCAAACTT+GGG | 0.566984 | 5.4:+9144251 | None:intergenic |
| ACTTCAAGGTTTGAGAGCAA+TGG | 0.567035 | 5.4:+9144235 | None:intergenic |
| AGAAAGGAGGACTCTCAACT+GGG | 0.567353 | 5.4:-9145163 | MS.gene015254:CDS |
| TTCTGGTGAGGTTGATACCA+AGG | 0.578817 | 5.4:-9144288 | MS.gene015254:CDS |
| TCGAAGATGAGCAAGGGACC+GGG | 0.581110 | 5.4:-9148674 | None:intergenic |
| CTAGCTTTGATCTGTGTCAG+AGG | 0.591430 | 5.4:+9144380 | None:intergenic |
| AGTGCTGACTATTTCTGGTG+AGG | 0.600743 | 5.4:-9144300 | MS.gene015254:CDS |
| CAACAATCAAGGAAAGGTTG+GGG | 0.608378 | 5.4:-9144354 | MS.gene015254:CDS |
| TGCCTCAGCACCAAATGCAA+GGG | 0.611427 | 5.4:+9144724 | None:intergenic |
| TAGGTTCAACAATCAAGGAA+AGG | 0.612340 | 5.4:-9144360 | MS.gene015254:CDS |
| TCAACTGCTTTGAAGAAAGG+AGG | 0.613940 | 5.4:-9145176 | MS.gene015254:CDS |
| CGACTGAGGTTAAGGTAGCA+TGG | 0.618567 | 5.4:+9144801 | None:intergenic |
| TTGCTTCAGTGTAGCGACTG+AGG | 0.620374 | 5.4:+9144787 | None:intergenic |
| GCCTGATTATAGTTCTGGCA+AGG | 0.623753 | 5.4:-9144930 | MS.gene015254:intron |
| GGCAGAAACATCAAAGATAG+GGG | 0.624754 | 5.4:+9144763 | None:intergenic |
| TTTCCTATCAGTGGCGACAA+GGG | 0.625564 | 5.4:-9144533 | MS.gene015254:intron |
| CTAAAATCGAAGATGAGCAA+GGG | 0.627918 | 5.4:-9148680 | None:intergenic |
| CTCTGACACAGATCAAAGCT+AGG | 0.632557 | 5.4:-9144379 | MS.gene015254:CDS |
| TAGCTTTGATCTGTGTCAGA+GGG | 0.634327 | 5.4:+9144381 | None:intergenic |
| TGAAACGGTAAGCTTCTGAT+CGG | 0.639844 | 5.4:+9148518 | None:intergenic |
| GATATTGGCAAGAAAGCCAA+AGG | 0.654162 | 5.4:-9148641 | MS.gene015254:intron |
| CTGTTGTGGATATTACCCGA+AGG | 0.654620 | 5.4:-9144454 | MS.gene015254:CDS |
| AGAACACTATTACGGTTGGA+GGG | 0.671397 | 5.4:-9144418 | MS.gene015254:CDS |
| AACAATCAAGGAAAGGTTGG+GGG | 0.680087 | 5.4:-9144353 | MS.gene015254:CDS |
| GAAAGGAGGACTCTCAACTG+GGG | 0.714176 | 5.4:-9145162 | MS.gene015254:CDS |
| AAGGGTTGGAGAACCAACAG+TGG | 0.718653 | 5.4:+9144742 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATTATCAGAATAAT+TGG | + | chr5.4:9144331-9144350 | None:intergenic | 10.0% |
| !! | ATACATTAAAATAAAAAGAT+AGG | + | chr5.4:9145166-9145185 | None:intergenic | 10.0% |
| !! | ATGTAGAATATAATTTAAAA+AGG | - | chr5.4:9146342-9146361 | MS.gene015254:intron | 10.0% |
| !! | TAATAATAAAAAGTAAGAAA+GGG | + | chr5.4:9147120-9147139 | None:intergenic | 10.0% |
| !! | TGTAGAATATAATTTAAAAA+GGG | - | chr5.4:9146343-9146362 | MS.gene015254:intron | 10.0% |
| !! | TTAATAATAAAAAGTAAGAA+AGG | + | chr5.4:9147121-9147140 | None:intergenic | 10.0% |
| !! | TTATTAATTATAAATTGTAG+TGG | + | chr5.4:9144452-9144471 | None:intergenic | 10.0% |
| !!! | AAAGTGTTATAATAAAATAA+AGG | + | chr5.4:9146072-9146091 | None:intergenic | 10.0% |
| !!! | AATTTTCAAAAAAGAATTAA+TGG | + | chr5.4:9145033-9145052 | None:intergenic | 10.0% |
| !!! | ACAGTTTTATTTTTTTAATA+CGG | - | chr5.4:9147466-9147485 | MS.gene015254:intron | 10.0% |
| !!! | ATTTTCAAAAAAGAATTAAT+GGG | + | chr5.4:9145032-9145051 | None:intergenic | 10.0% |
| !! | AGAGAAAAAATAATAAAAGA+GGG | + | chr5.4:9145651-9145670 | None:intergenic | 15.0% |
| !! | GTAGAATATAATTTAAAAAG+GGG | - | chr5.4:9146344-9146363 | MS.gene015254:intron | 15.0% |
| !! | TAGAATATAATTTAAAAAGG+GGG | - | chr5.4:9146345-9146364 | MS.gene015254:intron | 15.0% |
| !!! | ACAATAACTCTTTTTATATA+GGG | + | chr5.4:9144871-9144890 | None:intergenic | 15.0% |
| !!! | AGCTTTATAAATTAATTATC+TGG | - | chr5.4:9146553-9146572 | MS.gene015254:intron | 15.0% |
| !!! | AGTTTTATTTTTTTAATACG+GGG | - | chr5.4:9147468-9147487 | MS.gene015254:intron | 15.0% |
| !!! | ATTTACATTTTATTACTTAC+AGG | + | chr5.4:9145823-9145842 | None:intergenic | 15.0% |
| !!! | CAGTTTTATTTTTTTAATAC+GGG | - | chr5.4:9147467-9147486 | MS.gene015254:intron | 15.0% |
| !!! | TACATTTTCATAATTCATTT+TGG | - | chr5.4:9147161-9147180 | MS.gene015254:intron | 15.0% |
| !!! | TATTTTGAATTCATAAATGT+TGG | - | chr5.4:9146869-9146888 | MS.gene015254:intron | 15.0% |
| !!! | TTTACATTTTATTACTTACA+GGG | + | chr5.4:9145822-9145841 | None:intergenic | 15.0% |
| !!! | TTTTCAAAAAAGAATTAATG+GGG | + | chr5.4:9145031-9145050 | None:intergenic | 15.0% |
| !! | AGAATATAATTTAAAAAGGG+GGG | - | chr5.4:9146346-9146365 | MS.gene015254:intron | 20.0% |
| !! | ATAAAATGTAAATGCAATGT+AGG | - | chr5.4:9145830-9145849 | MS.gene015254:intron | 20.0% |
| !! | ATCTAATGTTCATTTCAATA+TGG | - | chr5.4:9147684-9147703 | MS.gene015254:intron | 20.0% |
| !! | ATGCTTATTACCTAAAATTT+GGG | - | chr5.4:9147002-9147021 | MS.gene015254:intron | 20.0% |
| !! | CTTATGTTCAATTAATTCTT+GGG | - | chr5.4:9144632-9144651 | MS.gene015254:intron | 20.0% |
| !! | GAGAGAAAAAATAATAAAAG+AGG | + | chr5.4:9145652-9145671 | None:intergenic | 20.0% |
| !! | TAAACAAAATAGCAATATCT+TGG | - | chr5.4:9146097-9146116 | MS.gene015254:intron | 20.0% |
| !! | TAAGAAAAATCACAAATCAA+TGG | - | chr5.4:9146601-9146620 | MS.gene015254:intron | 20.0% |
| !! | TTATGTTCAATTAATTCTTG+GGG | - | chr5.4:9144633-9144652 | MS.gene015254:intron | 20.0% |
| !!! | AACGAAATATTTTGATATCA+AGG | + | chr5.4:9144767-9144786 | None:intergenic | 20.0% |
| !!! | ACTTATTGGCTAAAAAATTA+GGG | - | chr5.4:9147213-9147232 | MS.gene015254:intron | 20.0% |
| !!! | ATGATCAATTGATTTATCTA+AGG | - | chr5.4:9146840-9146859 | MS.gene015254:intron | 20.0% |
| !!! | CACAATAACTCTTTTTATAT+AGG | + | chr5.4:9144872-9144891 | None:intergenic | 20.0% |
| !!! | TACTTATTGGCTAAAAAATT+AGG | - | chr5.4:9147212-9147231 | MS.gene015254:intron | 20.0% |
| !!! | TACTTTTGTGAATTTAGTTT+TGG | - | chr5.4:9145936-9145955 | MS.gene015254:intron | 20.0% |
| !!! | TCTTTTTTGAAAATTTTGAC+CGG | - | chr5.4:9145038-9145057 | MS.gene015254:intron | 20.0% |
| !!! | TGATCAATTGATTTATCTAA+GGG | - | chr5.4:9146841-9146860 | MS.gene015254:intron | 20.0% |
| !!! | TTAGAATTTTGATACATTGA+AGG | - | chr5.4:9144958-9144977 | MS.gene015254:CDS | 20.0% |
| !!! | TTGAAATTTTGATACATTGA+GGG | + | chr5.4:9144706-9144725 | None:intergenic | 20.0% |
| !!! | TTTGAAATTTTGATACATTG+AGG | + | chr5.4:9144707-9144726 | None:intergenic | 20.0% |
| ! | AAAAAGTAAGAAAGGGATAA+AGG | + | chr5.4:9147113-9147132 | None:intergenic | 25.0% |
| ! | AAAAGAAACTGAATGTTTAG+AGG | - | chr5.4:9146171-9146190 | MS.gene015254:intron | 25.0% |
| ! | AAACGATTTATGAGCATAAA+TGG | + | chr5.4:9146462-9146481 | None:intergenic | 25.0% |
| ! | AACAAATCAGAACACTATTA+CGG | - | chr5.4:9148480-9148499 | MS.gene015254:intron | 25.0% |
| ! | AAGAGTTATTGTGAGTATTA+AGG | - | chr5.4:9144879-9144898 | MS.gene015254:intron | 25.0% |
| ! | AATACTATATGAACAATGTC+TGG | - | chr5.4:9146141-9146160 | MS.gene015254:intron | 25.0% |
| ! | ACAATAAGTAAGTACGTATA+AGG | + | chr5.4:9144839-9144858 | None:intergenic | 25.0% |
| ! | AGAAATTCCAAAAGGAATTA+TGG | + | chr5.4:9146962-9146981 | None:intergenic | 25.0% |
| ! | AGAGTTATTGTGAGTATTAA+GGG | - | chr5.4:9144880-9144899 | MS.gene015254:intron | 25.0% |
| ! | ATAATCATCAATAACGTACA+AGG | - | chr5.4:9147378-9147397 | MS.gene015254:intron | 25.0% |
| ! | ATACTATATGAACAATGTCT+GGG | - | chr5.4:9146142-9146161 | MS.gene015254:intron | 25.0% |
| ! | CATGCTTATTACCTAAAATT+TGG | - | chr5.4:9147001-9147020 | MS.gene015254:intron | 25.0% |
| ! | GAGTATTAAGGGATTATTTA+AGG | - | chr5.4:9144891-9144910 | MS.gene015254:intron | 25.0% |
| ! | GCTTATGTTCAATTAATTCT+TGG | - | chr5.4:9144631-9144650 | MS.gene015254:intron | 25.0% |
| ! | TGCTTATTACCTAAAATTTG+GGG | - | chr5.4:9147003-9147022 | MS.gene015254:intron | 25.0% |
| ! | TTATGTACAGACTAAAATAC+TGG | + | chr5.4:9145731-9145750 | None:intergenic | 25.0% |
| !! | CTGATTCATATTTTATTACG+TGG | - | chr5.4:9145754-9145773 | MS.gene015254:intron | 25.0% |
| !! | GTGATTTTTCATCTTTTGTA+TGG | - | chr5.4:9148002-9148021 | MS.gene015254:intron | 25.0% |
| !! | GTTCTTTTTAAATTCATGTC+TGG | - | chr5.4:9147551-9147570 | MS.gene015254:intron | 25.0% |
| !! | TACATTTCCATAATTCCTTT+TGG | - | chr5.4:9146952-9146971 | MS.gene015254:intron | 25.0% |
| !! | TTCTGTATAAACTTGTTTCA+CGG | - | chr5.4:9145908-9145927 | MS.gene015254:intron | 25.0% |
| !! | TTGTACGTTATTGATGATTA+TGG | + | chr5.4:9147379-9147398 | None:intergenic | 25.0% |
| !!! | ACTGTTTACGATGTTTTTAA+AGG | + | chr5.4:9145141-9145160 | None:intergenic | 25.0% |
| !!! | CTCAATTTTGACATCAATAA+GGG | + | chr5.4:9147800-9147819 | None:intergenic | 25.0% |
| !!! | TCTCAATTTTGACATCAATA+AGG | + | chr5.4:9147801-9147820 | None:intergenic | 25.0% |
| !!! | TGTTTTAGATCTTTTGACAA+AGG | - | chr5.4:9144356-9144375 | MS.gene015254:CDS | 25.0% |
| !!! | TTACGATGTTTTTAAAGGAA+CGG | + | chr5.4:9145136-9145155 | None:intergenic | 25.0% |
| !!! | TTATTTTTTTAATACGGGGA+TGG | - | chr5.4:9147472-9147491 | MS.gene015254:intron | 25.0% |
| !!! | TTTTCATGTCTGAAATACTT+GGG | - | chr5.4:9146417-9146436 | MS.gene015254:intron | 25.0% |
| AATAAACATCAGCCTTAAGA+AGG | + | chr5.4:9145783-9145802 | None:intergenic | 30.0% | |
| ACTAACAAAATGCACAATCA+GGG | + | chr5.4:9144735-9144754 | None:intergenic | 30.0% | |
| ACTAACAAAGTAGACAATCA+GGG | - | chr5.4:9144929-9144948 | MS.gene015254:intron | 30.0% | |
| ATGTAAGGAGAAATTCCAAA+AGG | + | chr5.4:9146970-9146989 | None:intergenic | 30.0% | |
| ATTCTGTATAAGTGCGATAA+TGG | + | chr5.4:9146045-9146064 | None:intergenic | 30.0% | |
| CAAATACTAAGAATGTGCTA+TGG | - | chr5.4:9147607-9147626 | MS.gene015254:intron | 30.0% | |
| CAACTTGGATGGATAAAATT+TGG | + | chr5.4:9145525-9145544 | None:intergenic | 30.0% | |
| CATAGCACATTCTTAGTATT+TGG | + | chr5.4:9147609-9147628 | None:intergenic | 30.0% | |
| CTTAAGTAAATCATCTCATG+TGG | - | chr5.4:9147873-9147892 | MS.gene015254:intron | 30.0% | |
| GAGATTTGTAACAGAAATCT+TGG | + | chr5.4:9148311-9148330 | None:intergenic | 30.0% | |
| GGAATTATGGAAATGTACAA+TGG | + | chr5.4:9146949-9146968 | None:intergenic | 30.0% | |
| TAATTGCATTATCAGATGTC+AGG | - | chr5.4:9144500-9144519 | MS.gene015254:CDS | 30.0% | |
| TATGAAGCTTAGATATAGAC+AGG | + | chr5.4:9145086-9145105 | None:intergenic | 30.0% | |
| TTTCTGTTACAAATCTCTAG+CGG | - | chr5.4:9148314-9148333 | MS.gene015254:intron | 30.0% | |
| ! | ACAAGTTTATACAGAAGCAT+TGG | + | chr5.4:9145904-9145923 | None:intergenic | 30.0% |
| ! | TAATCACACATCAGAAGTAT+CGG | + | chr5.4:9144604-9144623 | None:intergenic | 30.0% |
| ! | TAATGGGGTAATAGTCATTT+TGG | + | chr5.4:9145016-9145035 | None:intergenic | 30.0% |
| ! | TGTTTTGTCTATAGACAAAG+CGG | + | chr5.4:9145591-9145610 | None:intergenic | 30.0% |
| !! | ATTAATTTGTTAGCCGTTGT+CGG | - | chr5.4:9144568-9144587 | MS.gene015254:intron | 30.0% |
| !! | GTTTTCATGTCTGAAATACT+TGG | - | chr5.4:9146416-9146435 | MS.gene015254:intron | 30.0% |
| !! | TTATACAGAAGCATTGGATT+TGG | + | chr5.4:9145898-9145917 | None:intergenic | 30.0% |
| AAAAAGGTCAGTGAATGTGA+GGG | + | chr5.4:9147924-9147943 | None:intergenic | 35.0% | |
| AAACAAACTAACACACGACA+TGG | + | chr5.4:9145459-9145478 | None:intergenic | 35.0% | |
| AAAGCTAGGTTCAACAATCA+AGG | - | chr5.4:9148541-9148560 | MS.gene015254:CDS | 35.0% | |
| AACATGTTCTTTCCTATCAG+TGG | - | chr5.4:9148364-9148383 | MS.gene015254:intron | 35.0% | |
| AATCAGAACACTATTACGGT+TGG | - | chr5.4:9148484-9148503 | MS.gene015254:intron | 35.0% | |
| AATTGAAGCTATCGTCTTTG+TGG | + | chr5.4:9147951-9147970 | None:intergenic | 35.0% | |
| ACTGAATGTTTAGAGGCAAT+TGG | - | chr5.4:9146178-9146197 | MS.gene015254:intron | 35.0% | |
| AGTAGTGCTGTAAGATGAAA+CGG | + | chr5.4:9144406-9144425 | None:intergenic | 35.0% | |
| ATTATCAGATGTCAGGTTAC+TGG | - | chr5.4:9144507-9144526 | MS.gene015254:CDS | 35.0% | |
| ATTGTACTTCCTGGTTATCA+TGG | - | chr5.4:9147576-9147595 | MS.gene015254:intron | 35.0% | |
| CAATATGGTTTCTTCCTTTC+AGG | - | chr5.4:9147699-9147718 | MS.gene015254:intron | 35.0% | |
| CAATGGCAACACTAATCATT+TGG | + | chr5.4:9146932-9146951 | None:intergenic | 35.0% | |
| CAATTGGATTGAATGTAGAC+AGG | - | chr5.4:9146194-9146213 | MS.gene015254:intron | 35.0% | |
| GACTAACAAAATGCACAATC+AGG | + | chr5.4:9144736-9144755 | None:intergenic | 35.0% | |
| GACTAACAAAGTAGACAATC+AGG | - | chr5.4:9144928-9144947 | MS.gene015254:intron | 35.0% | |
| GATATTCAGCCTAACAATGT+CGG | + | chr5.4:9145403-9145422 | None:intergenic | 35.0% | |
| GTTGCATACTGCATACTTAT+TGG | - | chr5.4:9147199-9147218 | MS.gene015254:intron | 35.0% | |
| TAATTTCCAGACACAAAGCT+TGG | + | chr5.4:9147528-9147547 | None:intergenic | 35.0% | |
| TACCTAAAATTTGGGGATAG+TGG | - | chr5.4:9147010-9147029 | MS.gene015254:intron | 35.0% | |
| TACTATTCGTTCCTCATTCA+GGG | + | chr5.4:9144675-9144694 | None:intergenic | 35.0% | |
| TAGGTTCAACAATCAAGGAA+AGG | - | chr5.4:9148546-9148565 | MS.gene015254:intron | 35.0% | |
| TATTGAGTGGCCTATACAAA+AGG | + | chr5.4:9146898-9146917 | None:intergenic | 35.0% | |
| TCAACAATCAAGGAAAGGTT+GGG | - | chr5.4:9148551-9148570 | MS.gene015254:intron | 35.0% | |
| TGGAGAAAAAACCCAAGTTT+GGG | - | chr5.4:9148644-9148663 | MS.gene015254:CDS | 35.0% | |
| TGGCAGAAACATCAAAGATA+GGG | + | chr5.4:9148147-9148166 | None:intergenic | 35.0% | |
| TTACTATTCGTTCCTCATTC+AGG | + | chr5.4:9144676-9144695 | None:intergenic | 35.0% | |
| TTCAACAATCAAGGAAAGGT+TGG | - | chr5.4:9148550-9148569 | MS.gene015254:intron | 35.0% | |
| TTTAAAAAGGGGGGAATTCT+TGG | - | chr5.4:9146355-9146374 | MS.gene015254:intron | 35.0% | |
| TTTCAACTTGGTTGTTCTGA+AGG | - | chr5.4:9147268-9147287 | MS.gene015254:intron | 35.0% | |
| ! | AATATCTTTTGTGCTCTCCT+TGG | - | chr5.4:9145417-9145436 | MS.gene015254:intron | 35.0% |
| ! | ATCCACTATCCCCAAATTTT+AGG | + | chr5.4:9147015-9147034 | None:intergenic | 35.0% |
| ! | ATGTTGGAAGCCTTTTGTAT+AGG | - | chr5.4:9146885-9146904 | MS.gene015254:intron | 35.0% |
| ! | GAATCGATTCAATTCACCTT+TGG | + | chr5.4:9144284-9144303 | None:intergenic | 35.0% |
| ! | GATTTGTCATTTGCAGTTAG+AGG | - | chr5.4:9148066-9148085 | MS.gene015254:intron | 35.0% |
| ! | TTTATCCATCCAAGTTGAGT+CGG | - | chr5.4:9145528-9145547 | MS.gene015254:intron | 35.0% |
| ! | TTTGTTGTCTATAGACGAAG+CGG | + | chr5.4:9145489-9145508 | None:intergenic | 35.0% |
| !! | AAATAGTCAGCACTGACTTT+GGG | + | chr5.4:9148600-9148619 | None:intergenic | 35.0% |
| !! | ACTTCAACTGCTTTGAAGAA+AGG | - | chr5.4:9147727-9147746 | MS.gene015254:intron | 35.0% |
| !! | TCTGATTTGTTGAGAACCTT+CGG | + | chr5.4:9148471-9148490 | None:intergenic | 35.0% |
| !! | TCTTCTTGATTTGGTCTAGA+TGG | + | chr5.4:9148426-9148445 | None:intergenic | 35.0% |
| !! | TGGGATTAGTTTCACGAAAT+TGG | - | chr5.4:9148246-9148265 | MS.gene015254:intron | 35.0% |
| !! | TGGTTTTCAAGACATGTTGT+TGG | - | chr5.4:9145988-9146007 | MS.gene015254:intron | 35.0% |
| !! | TGTATAAGTGCGATAATGGA+TGG | + | chr5.4:9146041-9146060 | None:intergenic | 35.0% |
| !! | TTTGGCTTTCTTGCCAATAT+CGG | + | chr5.4:9144266-9144285 | None:intergenic | 35.0% |
| !!! | AAACTTGGGTTTTTTCTCCA+GGG | + | chr5.4:9148644-9148663 | None:intergenic | 35.0% |
| !!! | ATGGTTTTAGGAATCAGACA+TGG | - | chr5.4:9146293-9146312 | MS.gene015254:intron | 35.0% |
| AACAATCAAGGAAAGGTTGG+GGG | - | chr5.4:9148553-9148572 | MS.gene015254:intron | 40.0% | |
| AAGCTGCCTGATTATAGTTC+TGG | - | chr5.4:9147971-9147990 | MS.gene015254:intron | 40.0% | |
| AATTGAGACAGCGTCAATTG+TGG | - | chr5.4:9147813-9147832 | MS.gene015254:intron | 40.0% | |
| ACCTTGCCAGAACTATAATC+AGG | + | chr5.4:9147980-9147999 | None:intergenic | 40.0% | |
| AGAACACTATTACGGTTGGA+GGG | - | chr5.4:9148488-9148507 | MS.gene015254:intron | 40.0% | |
| AGACAGGAACTTTGACAGAA+GGG | - | chr5.4:9146210-9146229 | MS.gene015254:intron | 40.0% | |
| AGGCTCAGAAAAATTGTTGG+TGG | - | chr5.4:9146641-9146660 | MS.gene015254:intron | 40.0% | |
| ATTACGTGGTCACCTTCTTA+AGG | - | chr5.4:9145768-9145787 | MS.gene015254:intron | 40.0% | |
| ATTGAGACAGCGTCAATTGT+GGG | - | chr5.4:9147814-9147833 | MS.gene015254:intron | 40.0% | |
| CAACAATCAAGGAAAGGTTG+GGG | - | chr5.4:9148552-9148571 | MS.gene015254:intron | 40.0% | |
| CAGAGGCTCAGAAAAATTGT+TGG | - | chr5.4:9146638-9146657 | MS.gene015254:intron | 40.0% | |
| CTCCACACTTAAACGTGATT+TGG | - | chr5.4:9145229-9145248 | MS.gene015254:intron | 40.0% | |
| CTGGAGAAAAAACCCAAGTT+TGG | - | chr5.4:9148643-9148662 | MS.gene015254:CDS | 40.0% | |
| CTTTCTGCTAGTCATAAGAG+CGG | - | chr5.4:9145959-9145978 | MS.gene015254:intron | 40.0% | |
| GAAAAAACCCAAGTTTGGGT+TGG | - | chr5.4:9148648-9148667 | MS.gene015254:CDS | 40.0% | |
| GAAAAAGGTCAGTGAATGTG+AGG | + | chr5.4:9147925-9147944 | None:intergenic | 40.0% | |
| GAGATTGAGTGATTGATCAC+TGG | - | chr5.4:9146726-9146745 | MS.gene015254:intron | 40.0% | |
| GATATTGGCAAGAAAGCCAA+AGG | - | chr5.4:9144265-9144284 | MS.gene015254:CDS | 40.0% | |
| GCAGGCTATGATACTAAATC+TGG | - | chr5.4:9148202-9148221 | MS.gene015254:intron | 40.0% | |
| GCGATAATACCGACATTGTT+AGG | - | chr5.4:9145391-9145410 | MS.gene015254:intron | 40.0% | |
| GGCAGAAACATCAAAGATAG+GGG | + | chr5.4:9148146-9148165 | None:intergenic | 40.0% | |
| GGTGATTCAAACGTATTGAG+TGG | + | chr5.4:9146911-9146930 | None:intergenic | 40.0% | |
| GTGGCAGAAACATCAAAGAT+AGG | + | chr5.4:9148148-9148167 | None:intergenic | 40.0% | |
| GTTTCATCTTACAGCACTAC+TGG | - | chr5.4:9144405-9144424 | MS.gene015254:CDS | 40.0% | |
| TAGACAGGAACTTTGACAGA+AGG | - | chr5.4:9146209-9146228 | MS.gene015254:intron | 40.0% | |
| TATGCAGTATGCAACATGTG+AGG | + | chr5.4:9147194-9147213 | None:intergenic | 40.0% | |
| TCAGACATGGAAGAAACAGA+TGG | - | chr5.4:9146306-9146325 | MS.gene015254:intron | 40.0% | |
| TCGTCTTTGTGGATGGAAAA+AGG | + | chr5.4:9147940-9147959 | None:intergenic | 40.0% | |
| TCTGATGTGTGATTAGTGTC+TGG | - | chr5.4:9144609-9144628 | MS.gene015254:intron | 40.0% | |
| TGAAACGGTAAGCTTCTGAT+CGG | + | chr5.4:9144391-9144410 | None:intergenic | 40.0% | |
| TGCCAAATCACGTTTAAGTG+TGG | + | chr5.4:9145234-9145253 | None:intergenic | 40.0% | |
| TGTCTATAGACAAAGCGGTT+TGG | + | chr5.4:9145586-9145605 | None:intergenic | 40.0% | |
| TTGAGAAATCTGTAGAGGAC+AGG | - | chr5.4:9146758-9146777 | MS.gene015254:intron | 40.0% | |
| TTGTTGTCTATAGACGAAGC+GGG | + | chr5.4:9145488-9145507 | None:intergenic | 40.0% | |
| TTTCAGCTTGGTTGTTCTGA+AGG | - | chr5.4:9147058-9147077 | MS.gene015254:intron | 40.0% | |
| ! | ATGTGAGGGTTGTATTGATC+TGG | + | chr5.4:9147910-9147929 | None:intergenic | 40.0% |
| ! | GACTACTTGCTACACATTCA+GGG | - | chr5.4:9144989-9145008 | MS.gene015254:CDS | 40.0% |
| ! | GCAATGAAAGCTTTTCAGCT+TGG | - | chr5.4:9147046-9147065 | MS.gene015254:intron | 40.0% |
| ! | GCTCGCTTTAAATGTTTCTG+AGG | + | chr5.4:9145707-9145726 | None:intergenic | 40.0% |
| ! | GGTTGTATTGATCTGGAAGA+GGG | + | chr5.4:9147903-9147922 | None:intergenic | 40.0% |
| ! | GTGAGTTGAGAAATCTGTAG+AGG | - | chr5.4:9146753-9146772 | MS.gene015254:intron | 40.0% |
| ! | TGACTACTTGCTACACATTC+AGG | - | chr5.4:9144988-9145007 | MS.gene015254:CDS | 40.0% |
| ! | TTTGATGTTTCTGCCACTGT+TGG | - | chr5.4:9148151-9148170 | MS.gene015254:intron | 40.0% |
| !! | AAGTCAGTGCTGACTATTTC+TGG | - | chr5.4:9148601-9148620 | MS.gene015254:intron | 40.0% |
| !! | ACACTGTCTCTGAAATTGTG+TGG | - | chr5.4:9148043-9148062 | MS.gene015254:intron | 40.0% |
| !! | CACTGTCTCTGAAATTGTGT+GGG | - | chr5.4:9148044-9148063 | MS.gene015254:intron | 40.0% |
| !! | CTGATTTGTTGAGAACCTTC+GGG | + | chr5.4:9148470-9148489 | None:intergenic | 40.0% |
| !! | GAAATAGTCAGCACTGACTT+TGG | + | chr5.4:9148601-9148620 | None:intergenic | 40.0% |
| !! | GCGCATTTGATGATGATTGT+CGG | - | chr5.4:9145110-9145129 | MS.gene015254:CDS | 40.0% |
| !! | TAGCTTTGATCTGTGTCAGA+GGG | + | chr5.4:9148528-9148547 | None:intergenic | 40.0% |
| !! | TCAACTGCTTTGAAGAAAGG+AGG | - | chr5.4:9147730-9147749 | MS.gene015254:intron | 40.0% |
| !! | TCTTGATTTGGTCTAGATGG+TGG | + | chr5.4:9148423-9148442 | None:intergenic | 40.0% |
| !!! | CAAACTTGGGTTTTTTCTCC+AGG | + | chr5.4:9148645-9148664 | None:intergenic | 40.0% |
| AAAACCATCCAAGCCTCCAA+GGG | + | chr5.4:9146281-9146300 | None:intergenic | 45.0% | |
| AAGAAAGGAGGACTCTCAAC+TGG | - | chr5.4:9147742-9147761 | MS.gene015254:intron | 45.0% | |
| AAGAATGTGCTATGGTTCCC+AGG | - | chr5.4:9147615-9147634 | MS.gene015254:intron | 45.0% | |
| AGAAAGGAGGACTCTCAACT+GGG | - | chr5.4:9147743-9147762 | MS.gene015254:intron | 45.0% | |
| AGAATGTGCTATGGTTCCCA+GGG | - | chr5.4:9147616-9147635 | MS.gene015254:intron | 45.0% | |
| AGACAGGACACAACATAGAC+AGG | + | chr5.4:9145070-9145089 | None:intergenic | 45.0% | |
| AGTCATAAGAGCGGAGCATA+TGG | - | chr5.4:9145968-9145987 | MS.gene015254:intron | 45.0% | |
| AGTTGAAGTGAGTGCCTGAA+AGG | + | chr5.4:9147716-9147735 | None:intergenic | 45.0% | |
| ATGCATGTTGACAGCAACGT+AGG | - | chr5.4:9147243-9147262 | MS.gene015254:intron | 45.0% | |
| CAAGCCTATTCCCACTAAGT+GGG | + | chr5.4:9145318-9145337 | None:intergenic | 45.0% | |
| CAGAACACTATTACGGTTGG+AGG | - | chr5.4:9148487-9148506 | MS.gene015254:intron | 45.0% | |
| CAGCAGCACTCTTCTTGATT+TGG | + | chr5.4:9148435-9148454 | None:intergenic | 45.0% | |
| CATGCAGTACGCATCATGTA+AGG | + | chr5.4:9146985-9147004 | None:intergenic | 45.0% | |
| CTATTCCCACTAAGTGGGAT+GGG | + | chr5.4:9145313-9145332 | None:intergenic | 45.0% | |
| CTCTGACACAGATCAAAGCT+AGG | - | chr5.4:9148527-9148546 | MS.gene015254:CDS | 45.0% | |
| CTGTTGTGGATATTACCCGA+AGG | - | chr5.4:9148452-9148471 | MS.gene015254:intron | 45.0% | |
| GAAGCTATCGTCTTTGTGGA+TGG | + | chr5.4:9147947-9147966 | None:intergenic | 45.0% | |
| GACAGGACACAACATAGACA+GGG | + | chr5.4:9145069-9145088 | None:intergenic | 45.0% | |
| GAGCCTCTGCTGTCTATTAT+TGG | + | chr5.4:9146627-9146646 | None:intergenic | 45.0% | |
| GATTTGGCAAGAGTAGTACC+TGG | - | chr5.4:9145245-9145264 | MS.gene015254:intron | 45.0% | |
| GCTGTTGAAAGTTATCACGC+AGG | - | chr5.4:9146386-9146405 | MS.gene015254:intron | 45.0% | |
| GTACTTCCTGGTTATCATGG+TGG | - | chr5.4:9147579-9147598 | MS.gene015254:intron | 45.0% | |
| TAAAACCATCCAAGCCTCCA+AGG | + | chr5.4:9146282-9146301 | None:intergenic | 45.0% | |
| TCGGTATTATCGCTTGTGCT+AGG | + | chr5.4:9145384-9145403 | None:intergenic | 45.0% | |
| TGGCCAATAATAGACAGCAG+AGG | - | chr5.4:9146621-9146640 | MS.gene015254:intron | 45.0% | |
| TGTCTGGCTATTGTACTTCC+TGG | - | chr5.4:9147567-9147586 | MS.gene015254:intron | 45.0% | |
| TTCTTAATGCCGTACTGCAG+CGG | - | chr5.4:9147417-9147436 | MS.gene015254:intron | 45.0% | |
| TTTCCAGACACAAAGCTTGG+AGG | + | chr5.4:9147525-9147544 | None:intergenic | 45.0% | |
| TTTCCTATCAGTGGCGACAA+GGG | - | chr5.4:9148373-9148392 | MS.gene015254:intron | 45.0% | |
| ! | CTTGGACAAGAGTTGAGTTG+AGG | - | chr5.4:9146115-9146134 | MS.gene015254:intron | 45.0% |
| ! | GAAGATCCTGGTTTGAACCA+AGG | + | chr5.4:9145437-9145456 | None:intergenic | 45.0% |
| ! | GCAACGTAGGCTTTTCAACT+TGG | - | chr5.4:9147256-9147275 | MS.gene015254:intron | 45.0% |
| ! | GGGTTGTATTGATCTGGAAG+AGG | + | chr5.4:9147904-9147923 | None:intergenic | 45.0% |
| ! | GTCACTTTAGTCCCTGAATG+AGG | - | chr5.4:9144661-9144680 | MS.gene015254:CDS | 45.0% |
| ! | TTCATGTAGCCGACTCAACT+TGG | + | chr5.4:9145540-9145559 | None:intergenic | 45.0% |
| ! | TTGGAGGCTTGGATGGTTTT+AGG | - | chr5.4:9146281-9146300 | MS.gene015254:intron | 45.0% |
| ! | TTTCCTCCAAGCTTTGTGTC+TGG | - | chr5.4:9147519-9147538 | MS.gene015254:intron | 45.0% |
| !! | AGCGGTTTGGTTCAACACAA+TGG | + | chr5.4:9145573-9145592 | None:intergenic | 45.0% |
| !! | AGTGCTGACTATTTCTGGTG+AGG | - | chr5.4:9148606-9148625 | MS.gene015254:intron | 45.0% |
| !! | CGGTTTGGTTCAACACAATG+GGG | + | chr5.4:9145571-9145590 | None:intergenic | 45.0% |
| !! | CTAGCTTTGATCTGTGTCAG+AGG | + | chr5.4:9148529-9148548 | None:intergenic | 45.0% |
| !! | GCCTGATTATAGTTCTGGCA+AGG | - | chr5.4:9147976-9147995 | MS.gene015254:intron | 45.0% |
| !! | GCGATAATGGATGGTTCGTA+GGG | + | chr5.4:9146032-9146051 | None:intergenic | 45.0% |
| !! | GCGGTTTGGTTCAACACAAT+GGG | + | chr5.4:9145572-9145591 | None:intergenic | 45.0% |
| !! | TGATTTGGTCTAGATGGTGG+AGG | + | chr5.4:9148420-9148439 | None:intergenic | 45.0% |
| !! | TGCGATAATGGATGGTTCGT+AGG | + | chr5.4:9146033-9146052 | None:intergenic | 45.0% |
| !! | TTCTGGTGAGGTTGATACCA+AGG | - | chr5.4:9148618-9148637 | MS.gene015254:intron | 45.0% |
| AACATGAACCCGCTGCAGTA+CGG | + | chr5.4:9147429-9147448 | None:intergenic | 50.0% | |
| AAGGGTTGGAGAACCAACAG+TGG | + | chr5.4:9148167-9148186 | None:intergenic | 50.0% | |
| ACACACGACATGGAAGATCC+TGG | + | chr5.4:9145449-9145468 | None:intergenic | 50.0% | |
| ACCTGGATGTGTGACATCCT+AGG | - | chr5.4:9145262-9145281 | MS.gene015254:intron | 50.0% | |
| AGCAATGGCCAACCCAAACT+TGG | + | chr5.4:9148659-9148678 | None:intergenic | 50.0% | |
| AGGTTAAGGTAGCATGGTCG+TGG | + | chr5.4:9148102-9148121 | None:intergenic | 50.0% | |
| ATGCCAATGCGAGACTGACA+AGG | - | chr5.4:9146810-9146829 | MS.gene015254:intron | 50.0% | |
| CAGTGTAGCGACTGAGGTTA+AGG | + | chr5.4:9148116-9148135 | None:intergenic | 50.0% | |
| CCAAGCCTATTCCCACTAAG+TGG | + | chr5.4:9145319-9145338 | None:intergenic | 50.0% | |
| CCAATATCGGAGTAGAGACC+CGG | + | chr5.4:9144253-9144272 | None:intergenic | 50.0% | |
| CCACTTAGTGGGAATAGGCT+TGG | - | chr5.4:9145316-9145335 | MS.gene015254:intron | 50.0% | |
| CCATCCCACTTAGTGGGAAT+AGG | - | chr5.4:9145311-9145330 | MS.gene015254:intron | 50.0% | |
| CCTATTCCCACTAAGTGGGA+TGG | + | chr5.4:9145314-9145333 | None:intergenic | 50.0% | |
| CGACTGAGGTTAAGGTAGCA+TGG | + | chr5.4:9148108-9148127 | None:intergenic | 50.0% | |
| CTTAGTGGGAATAGGCTTGG+TGG | - | chr5.4:9145319-9145338 | MS.gene015254:intron | 50.0% | |
| CTTTCCTATCAGTGGCGACA+AGG | - | chr5.4:9148372-9148391 | MS.gene015254:intron | 50.0% | |
| GAAAGGAGGACTCTCAACTG+GGG | - | chr5.4:9147744-9147763 | MS.gene015254:intron | 50.0% | |
| GCAATGGCCAACCCAAACTT+GGG | + | chr5.4:9148658-9148677 | None:intergenic | 50.0% | |
| GGAAAGCCACCATGATAACC+AGG | + | chr5.4:9147588-9147607 | None:intergenic | 50.0% | |
| GGTTCTCCAACCCTTGCATT+TGG | - | chr5.4:9148172-9148191 | MS.gene015254:intron | 50.0% | |
| GTGCAACACAAGGACTTCCT+AGG | + | chr5.4:9145282-9145301 | None:intergenic | 50.0% | |
| TCAAAAAACAGCGCCACCCT+TGG | - | chr5.4:9146262-9146281 | MS.gene015254:intron | 50.0% | |
| TCAGCACCAAATGCAAGGGT+TGG | + | chr5.4:9148181-9148200 | None:intergenic | 50.0% | |
| TCCTAGGATGTCACACATCC+AGG | + | chr5.4:9145266-9145285 | None:intergenic | 50.0% | |
| TCTTAATGCCGTACTGCAGC+GGG | - | chr5.4:9147418-9147437 | MS.gene015254:intron | 50.0% | |
| TGCCTCAGCACCAAATGCAA+GGG | + | chr5.4:9148185-9148204 | None:intergenic | 50.0% | |
| TGCTCTCCTTGGTTCAAACC+AGG | - | chr5.4:9145428-9145447 | MS.gene015254:intron | 50.0% | |
| TTGCTTCAGTGTAGCGACTG+AGG | + | chr5.4:9148122-9148141 | None:intergenic | 50.0% | |
| ! | TGTAGCCGACTCAACTTGGA+TGG | + | chr5.4:9145536-9145555 | None:intergenic | 50.0% |
| !! | AACCCTTGCATTTGGTGCTG+AGG | - | chr5.4:9148180-9148199 | MS.gene015254:intron | 50.0% |
| !! | CAAGAAGAGTGCTGCTGTTG+TGG | - | chr5.4:9148438-9148457 | MS.gene015254:intron | 50.0% |
| AAAAACAGCGCCACCCTTGG+AGG | - | chr5.4:9146265-9146284 | MS.gene015254:intron | 55.0% | |
| AGGACTCTCAACTGGGGATG+TGG | - | chr5.4:9147750-9147769 | MS.gene015254:intron | 55.0% | |
| CAACATAGACAGGGCGACAC+CGG | + | chr5.4:9145060-9145079 | None:intergenic | 55.0% | |
| CCGGGTCTCTACTCCGATAT+TGG | - | chr5.4:9144250-9144269 | MS.gene015254:CDS | 55.0% | |
| CTGCCTCAGCACCAAATGCA+AGG | + | chr5.4:9148186-9148205 | None:intergenic | 55.0% | |
| GCACCTTGTCAGTCTCGCAT+TGG | + | chr5.4:9146816-9146835 | None:intergenic | 55.0% | |
| TCACCCTTGTCGCCACTGAT+AGG | + | chr5.4:9148379-9148398 | None:intergenic | 55.0% | |
| TTCCCACTAAGTGGGATGGG+CGG | + | chr5.4:9145310-9145329 | None:intergenic | 55.0% | |
| TTGGGAAGAGCTCGTGCTGT+AGG | + | chr5.4:9148582-9148601 | None:intergenic | 55.0% | |
| ! | CAGCGGGTTCATGTTGAAGG+TGG | - | chr5.4:9147434-9147453 | MS.gene015254:intron | 55.0% |
| ! | CTGCAGCGGGTTCATGTTGA+AGG | - | chr5.4:9147431-9147450 | MS.gene015254:intron | 55.0% |
| !! | CGGTGCTACATAGCCGACAA+CGG | + | chr5.4:9144584-9144603 | None:intergenic | 55.0% |
| !! | CTTGCATTTGGTGCTGAGGC+AGG | - | chr5.4:9148184-9148203 | MS.gene015254:intron | 55.0% |
| !! | TGAGGTTGATACCAAGGCCC+TGG | - | chr5.4:9148624-9148643 | MS.gene015254:intron | 55.0% |
| !!! | GGGTTTTTTCTCCAGGGCCT+TGG | + | chr5.4:9148638-9148657 | None:intergenic | 55.0% |
| ACCATCCAAGCCTCCAAGGG+TGG | + | chr5.4:9146278-9146297 | None:intergenic | 60.0% | |
| CTCAGCTGAGTCGTGACCCT+GGG | + | chr5.4:9147635-9147654 | None:intergenic | 60.0% | |
| CTCTCAACTGGGGATGTGGC+AGG | - | chr5.4:9147754-9147773 | MS.gene015254:intron | 60.0% | |
| TCCCACTAAGTGGGATGGGC+GGG | + | chr5.4:9145309-9145328 | None:intergenic | 60.0% | |
| TCCCGCCCATCCCACTTAGT+GGG | - | chr5.4:9145305-9145324 | MS.gene015254:intron | 60.0% | |
| TCTCAGCTGAGTCGTGACCC+TGG | + | chr5.4:9147636-9147655 | None:intergenic | 60.0% | |
| CTAAGTGGGATGGGCGGGAG+AGG | + | chr5.4:9145304-9145323 | None:intergenic | 65.0% | |
| CTCCCGCCCATCCCACTTAG+TGG | - | chr5.4:9145304-9145323 | MS.gene015254:intron | 65.0% | |
| GCCACCCTTGGAGGCTTGGA+TGG | - | chr5.4:9146274-9146293 | MS.gene015254:intron | 65.0% | |
| ! | GGCGGGAGAGGTGCAACACA+AGG | + | chr5.4:9145292-9145311 | None:intergenic | 65.0% |
| CAGCGCCACCCTTGGAGGCT+TGG | - | chr5.4:9146270-9146289 | MS.gene015254:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 9144238 | 9148690 | 9144238 | ID=MS.gene015254 |
| chr5.4 | mRNA | 9144238 | 9148690 | 9144238 | ID=MS.gene015254.t1;Parent=MS.gene015254 |
| chr5.4 | exon | 9148642 | 9148690 | 9148642 | ID=MS.gene015254.t1.exon1;Parent=MS.gene015254.t1 |
| chr5.4 | CDS | 9148642 | 9148690 | 9148642 | ID=cds.MS.gene015254.t1;Parent=MS.gene015254.t1 |
| chr5.4 | exon | 9148497 | 9148564 | 9148497 | ID=MS.gene015254.t1.exon2;Parent=MS.gene015254.t1 |
| chr5.4 | CDS | 9148497 | 9148564 | 9148497 | ID=cds.MS.gene015254.t1;Parent=MS.gene015254.t1 |
| chr5.4 | exon | 9145097 | 9145207 | 9145097 | ID=MS.gene015254.t1.exon3;Parent=MS.gene015254.t1 |
| chr5.4 | CDS | 9145097 | 9145207 | 9145097 | ID=cds.MS.gene015254.t1;Parent=MS.gene015254.t1 |
| chr5.4 | exon | 9144931 | 9145017 | 9144931 | ID=MS.gene015254.t1.exon4;Parent=MS.gene015254.t1 |
| chr5.4 | CDS | 9144931 | 9145017 | 9144931 | ID=cds.MS.gene015254.t1;Parent=MS.gene015254.t1 |
| chr5.4 | exon | 9144638 | 9144846 | 9144638 | ID=MS.gene015254.t1.exon5;Parent=MS.gene015254.t1 |
| chr5.4 | CDS | 9144638 | 9144846 | 9144638 | ID=cds.MS.gene015254.t1;Parent=MS.gene015254.t1 |
| chr5.4 | exon | 9144238 | 9144544 | 9144238 | ID=MS.gene015254.t1.exon6;Parent=MS.gene015254.t1 |
| chr5.4 | CDS | 9144238 | 9144544 | 9144238 | ID=cds.MS.gene015254.t1;Parent=MS.gene015254.t1 |
| Gene Sequence |
| Protein sequence |
