Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79650.t1 | XP_003621109.1 | 98.6 | 277 | 4 | 0 | 1 | 277 | 1 | 277 | 1.30E-150 | 542.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79650.t1 | P42054 | 81.0 | 274 | 52 | 0 | 4 | 277 | 3 | 276 | 1.2e-128 | 460.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79650.t1 | G7KYU2 | 98.6 | 277 | 4 | 0 | 1 | 277 | 1 | 277 | 9.1e-151 | 542.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04918 | MS.gene79650 | -0.801193 | 1.01E-48 | -1.69E-46 |
| MS.gene049385 | MS.gene79650 | 0.831526 | 1.59E-55 | -1.69E-46 |
| MS.gene049419 | MS.gene79650 | 0.827811 | 1.27E-54 | -1.69E-46 |
| MS.gene049499 | MS.gene79650 | -0.818841 | 1.59E-52 | -1.69E-46 |
| MS.gene051019 | MS.gene79650 | -0.808398 | 3.16E-50 | -1.69E-46 |
| MS.gene053272 | MS.gene79650 | 0.83597 | 1.23E-56 | -1.69E-46 |
| MS.gene054651 | MS.gene79650 | -0.809538 | 1.80E-50 | -1.69E-46 |
| MS.gene057102 | MS.gene79650 | -0.812027 | 5.21E-51 | -1.69E-46 |
| MS.gene057208 | MS.gene79650 | -0.806903 | 6.56E-50 | -1.69E-46 |
| MS.gene058159 | MS.gene79650 | -0.806881 | 6.63E-50 | -1.69E-46 |
| MS.gene059338 | MS.gene79650 | 0.804007 | 2.66E-49 | -1.69E-46 |
| MS.gene05985 | MS.gene79650 | 0.835864 | 1.31E-56 | -1.69E-46 |
| MS.gene060935 | MS.gene79650 | -0.812406 | 4.31E-51 | -1.69E-46 |
| MS.gene060937 | MS.gene79650 | -0.827331 | 1.66E-54 | -1.69E-46 |
| MS.gene061188 | MS.gene79650 | -0.810025 | 1.41E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene20294 | MS.gene79650 | PPI |
| MS.gene43545 | MS.gene79650 | PPI |
| MS.gene015254 | MS.gene79650 | PPI |
| MS.gene79650 | MS.gene09596 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79650.t1 | MTR_7g009330 | 98.556 | 277 | 4 | 0 | 1 | 277 | 1 | 277 | 0.0 | 556 |
| MS.gene79650.t1 | MTR_6g011390 | 69.314 | 277 | 83 | 1 | 3 | 277 | 2 | 278 | 3.60e-144 | 406 |
| MS.gene79650.t1 | MTR_8g469150 | 58.029 | 274 | 115 | 0 | 4 | 277 | 3 | 276 | 2.04e-116 | 335 |
| MS.gene79650.t1 | MTR_8g469150 | 57.736 | 265 | 112 | 0 | 4 | 268 | 3 | 267 | 1.17e-111 | 323 |
| MS.gene79650.t1 | MTR_5g015580 | 50.545 | 275 | 136 | 0 | 3 | 277 | 2 | 276 | 7.75e-91 | 270 |
| MS.gene79650.t1 | MTR_1g018205 | 42.238 | 277 | 160 | 0 | 1 | 277 | 1 | 277 | 1.31e-75 | 232 |
| MS.gene79650.t1 | MTR_4g128300 | 42.446 | 278 | 157 | 2 | 3 | 277 | 2 | 279 | 1.95e-74 | 229 |
| MS.gene79650.t1 | MTR_4g107840 | 34.043 | 282 | 140 | 6 | 3 | 277 | 2 | 244 | 7.47e-48 | 159 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79650.t1 | AT3G01280 | 61.314 | 274 | 106 | 0 | 4 | 277 | 3 | 276 | 1.60e-127 | 363 |
| MS.gene79650.t1 | AT5G15090 | 59.854 | 274 | 108 | 1 | 4 | 277 | 3 | 274 | 4.86e-124 | 355 |
| MS.gene79650.t1 | AT5G15090 | 59.854 | 274 | 108 | 1 | 4 | 277 | 3 | 274 | 4.86e-124 | 355 |
| MS.gene79650.t1 | AT5G67500 | 48.000 | 275 | 143 | 0 | 3 | 277 | 2 | 276 | 1.70e-89 | 267 |
| MS.gene79650.t1 | AT5G67500 | 46.992 | 266 | 141 | 0 | 3 | 268 | 2 | 267 | 5.63e-84 | 254 |
| MS.gene79650.t1 | AT5G67500 | 43.709 | 302 | 143 | 1 | 3 | 277 | 2 | 303 | 1.97e-83 | 253 |
| MS.gene79650.t1 | AT5G57490 | 44.118 | 272 | 150 | 1 | 6 | 277 | 5 | 274 | 8.12e-81 | 245 |
| MS.gene79650.t1 | AT3G49920 | 37.091 | 275 | 123 | 4 | 3 | 277 | 2 | 226 | 7.84e-48 | 159 |
| MS.gene79650.t1 | AT3G49920 | 44.262 | 122 | 59 | 2 | 3 | 115 | 2 | 123 | 3.28e-23 | 92.4 |
| MS.gene79650.t1 | AT3G49920 | 44.262 | 122 | 59 | 2 | 3 | 115 | 2 | 123 | 3.28e-23 | 92.4 |
| MS.gene79650.t1 | AT3G49920 | 52.632 | 76 | 36 | 0 | 3 | 78 | 2 | 77 | 8.08e-20 | 82.8 |
| MS.gene79650.t1 | AT5G37610 | 31.081 | 148 | 98 | 2 | 112 | 257 | 2 | 147 | 6.71e-19 | 82.0 |
Find 69 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAATGGTGATGAGTGATTT+AGG | 0.306493 | 7.3:-88589626 | None:intergenic |
| GGAACTAATGCTCTTGCATT+TGG | 0.326707 | 7.3:+88588697 | MS.gene79650:CDS |
| AACCCAGTTGTCAACTTATC+TGG | 0.362397 | 7.3:+88588667 | MS.gene79650:CDS |
| TGCTAAGGTTGGATTGAGTT+TGG | 0.368402 | 7.3:+88589682 | MS.gene79650:CDS |
| ACACCAGATAAGTTGACAAC+TGG | 0.376037 | 7.3:-88588670 | None:intergenic |
| AAAATTCCTGATCCAGCATC+TGG | 0.377161 | 7.3:+88588419 | MS.gene79650:CDS |
| GACGCCACTCGTGCTGGATA+AGG | 0.393225 | 7.3:-88589604 | None:intergenic |
| AGGTAGAGACGGTAAACTTC+TGG | 0.407388 | 7.3:-88585729 | None:intergenic |
| TTTCTTATGATACCAAACTT+AGG | 0.414471 | 7.3:+88588728 | MS.gene79650:CDS |
| ACGCCACTCGTGCTGGATAA+GGG | 0.420370 | 7.3:-88589603 | None:intergenic |
| TTCTTATGATACCAAACTTA+GGG | 0.427175 | 7.3:+88588729 | MS.gene79650:CDS |
| ACCTTCCCAGATGCTGGATC+AGG | 0.441747 | 7.3:-88588425 | None:intergenic |
| GGCACTTGCCTTGGCTGAGT+TGG | 0.447115 | 7.3:-88589582 | None:intergenic |
| CTGGAGTAAGCGGCAACATT+GGG | 0.447370 | 7.3:+88588635 | MS.gene79650:CDS |
| CACTGCTGTTGGTGTTGACA+TGG | 0.447929 | 7.3:+88589472 | MS.gene79650:CDS |
| GGTGTCTAGCTCAGTAGAAA+TGG | 0.457756 | 7.3:-88589642 | None:intergenic |
| AAAGAAAGGTGAACTGTTTG+TGG | 0.462533 | 7.3:+88587829 | MS.gene79650:CDS |
| ATTTAGGACGCCACTCGTGC+TGG | 0.462631 | 7.3:-88589610 | None:intergenic |
| TATCTTACCTTCCCAGATGC+TGG | 0.465903 | 7.3:-88588431 | None:intergenic |
| GCTGGAGTAAGCGGCAACAT+TGG | 0.466742 | 7.3:+88588634 | MS.gene79650:CDS |
| CTTCACACCAGGAGCAGGTT+CGG | 0.471845 | 7.3:-88588381 | None:intergenic |
| CTGGATAAGGGCACTTGCCT+TGG | 0.473358 | 7.3:-88589591 | None:intergenic |
| CGACCCTTCAATGTTGTCAA+TGG | 0.474649 | 7.3:-88589554 | None:intergenic |
| TTTATCAAAGATGACTTGCT+TGG | 0.483885 | 7.3:+88588781 | MS.gene79650:CDS |
| GAATCAAGCTATGGCTGCTA+AGG | 0.489854 | 7.3:+88585187 | None:intergenic |
| CTACAGGCTATCACATCATC+AGG | 0.489864 | 7.3:+88587803 | MS.gene79650:intron |
| GAGCTAACAAAATCTAATGT+TGG | 0.491591 | 7.3:+88588751 | MS.gene79650:CDS |
| GGATCCATTGACAACATTGA+AGG | 0.493835 | 7.3:+88589550 | MS.gene79650:CDS |
| CAATACTTGCATGACTATGC+TGG | 0.495247 | 7.3:+88588616 | MS.gene79650:CDS |
| ACATCATCAGGTACAAAGAA+AGG | 0.517422 | 7.3:+88587815 | MS.gene79650:CDS |
| CCAACAGCAGTGTTGGTCAC+GGG | 0.519304 | 7.3:-88589461 | None:intergenic |
| ACTGTCACCGAACCTGCTCC+TGG | 0.528554 | 7.3:+88588374 | MS.gene79650:CDS |
| GTCTCTACCTACTCACCCAC+TGG | 0.537192 | 7.3:+88585742 | MS.gene79650:CDS |
| ACTAATGCTCTTGCATTTGG+TGG | 0.539456 | 7.3:+88588700 | MS.gene79650:CDS |
| AAGAAAGGTGAACTGTTTGT+GGG | 0.540867 | 7.3:+88587830 | MS.gene79650:CDS |
| CACCAGATAAGTTGACAACT+GGG | 0.545239 | 7.3:-88588669 | None:intergenic |
| GCCGATGTCAGAGTAGAGAC+CGG | 0.550627 | 7.3:-88585213 | None:intergenic |
| CTTATAATAGCCTTCACACC+AGG | 0.553164 | 7.3:-88588392 | None:intergenic |
| ACTTGGTGTCCAACATGCAT+TGG | 0.554631 | 7.3:+88589529 | MS.gene79650:CDS |
| CCGATGTCAGAGTAGAGACC+GGG | 0.556425 | 7.3:-88585212 | None:intergenic |
| GTCAACACCAACAGCAGTGT+TGG | 0.558396 | 7.3:-88589468 | None:intergenic |
| ATAGCCTTCACACCAGGAGC+AGG | 0.561752 | 7.3:-88588386 | None:intergenic |
| GATCCATTGACAACATTGAA+GGG | 0.562746 | 7.3:+88589551 | MS.gene79650:CDS |
| CCCGGTCTCTACTCTGACAT+CGG | 0.568162 | 7.3:+88585212 | MS.gene79650:CDS |
| GCTATGGCTGCTAAGGGTCC+CGG | 0.572243 | 7.3:+88585194 | None:intergenic |
| CATGACTATGCTGGAGTAAG+CGG | 0.575977 | 7.3:+88588625 | MS.gene79650:CDS |
| ACCAACAGCAGTGTTGGTCA+CGG | 0.576428 | 7.3:-88589462 | None:intergenic |
| CGAACCTGCTCCTGGTGTGA+AGG | 0.577083 | 7.3:+88588382 | MS.gene79650:CDS |
| AGCAGGTTCGGTGACAGTGA+TGG | 0.580030 | 7.3:-88588369 | None:intergenic |
| AAATTCCTGATCCAGCATCT+GGG | 0.591189 | 7.3:+88588420 | MS.gene79650:CDS |
| GGCCATTGAAAAGAGTGCTA+AGG | 0.593327 | 7.3:+88589667 | MS.gene79650:CDS |
| ATTGAAAAGAGTGCTAAGGT+TGG | 0.595148 | 7.3:+88589671 | MS.gene79650:CDS |
| TTTGTGTGCAGGAATGAGAA+AGG | 0.601343 | 7.3:+88589401 | MS.gene79650:intron |
| GTGCCCTTATCCAGCACGAG+TGG | 0.606194 | 7.3:+88589600 | MS.gene79650:CDS |
| TCCTGATCCAGCATCTGGGA+AGG | 0.609354 | 7.3:+88588424 | MS.gene79650:CDS |
| CCCGTGACCAACACTGCTGT+TGG | 0.613752 | 7.3:+88589461 | MS.gene79650:CDS |
| CAACAGCAGTGTTGGTCACG+GGG | 0.615828 | 7.3:-88589460 | None:intergenic |
| TCGTATCACCAACTCAGCCA+AGG | 0.624155 | 7.3:+88589574 | MS.gene79650:CDS |
| TCAATGGATCCAATGCATGT+TGG | 0.627022 | 7.3:-88589538 | None:intergenic |
| AGAGAGAACAACTTCACACT+TGG | 0.632696 | 7.3:+88589512 | MS.gene79650:CDS |
| AATTCAACTCACAACTCCAG+TGG | 0.636676 | 7.3:-88585758 | None:intergenic |
| AATCAAGCTATGGCTGCTAA+GGG | 0.637442 | 7.3:+88585188 | None:intergenic |
| ATTCAACTCACAACTCCAGT+GGG | 0.637670 | 7.3:-88585757 | None:intergenic |
| AGTGGGTGAGTAGGTAGAGA+CGG | 0.638121 | 7.3:-88585740 | None:intergenic |
| TGTGTCTACTTTGAAGTCAG+CGG | 0.653058 | 7.3:-88587888 | None:intergenic |
| GACATCGGCAAGAAAGCTAG+AGG | 0.653085 | 7.3:+88585227 | MS.gene79650:CDS |
| CACAACTCCAGTGGGTGAGT+AGG | 0.656486 | 7.3:-88585749 | None:intergenic |
| ACTGCTGTTGGTGTTGACAT+GGG | 0.661896 | 7.3:+88589473 | MS.gene79650:CDS |
| TTCTACTGAGCTAGACACCA+AGG | 0.676467 | 7.3:+88589646 | MS.gene79650:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTATGATATTTGAAAT+TGG | + | chr7.3:88585471-88585490 | MS.gene79650:intron | 10.0% |
| !! | ATAATCTTCAAAAGTAAATA+AGG | - | chr7.3:88586846-88586865 | None:intergenic | 15.0% |
| !! | TTATTTGAAAATGAAAGAAA+TGG | + | chr7.3:88585985-88586004 | MS.gene79650:intron | 15.0% |
| !! | TTGACAAATTTATTTGATAA+AGG | + | chr7.3:88587432-88587451 | MS.gene79650:intron | 15.0% |
| !!! | AAGTTTTGATTTTTCTTTTT+GGG | + | chr7.3:88585369-88585388 | MS.gene79650:intron | 15.0% |
| !!! | ATTTACTTTTGAAGATTATT+GGG | + | chr7.3:88586847-88586866 | MS.gene79650:intron | 15.0% |
| !!! | ATTTATGTTTTAACCATTTT+TGG | + | chr7.3:88586483-88586502 | MS.gene79650:intron | 15.0% |
| !!! | GTTTGATGAAATTTTTTTAT+GGG | + | chr7.3:88585659-88585678 | MS.gene79650:intron | 15.0% |
| !!! | GTTTGTTTTTTTTTTTTGTT+GGG | + | chr7.3:88585608-88585627 | MS.gene79650:intron | 15.0% |
| !!! | TATTTACTTTTGAAGATTAT+TGG | + | chr7.3:88586846-88586865 | MS.gene79650:intron | 15.0% |
| !!! | TGTTTGATGAAATTTTTTTA+TGG | + | chr7.3:88585658-88585677 | MS.gene79650:intron | 15.0% |
| !!! | TGTTTGTTTTTTTTTTTTGT+TGG | + | chr7.3:88585607-88585626 | MS.gene79650:intron | 15.0% |
| !!! | TTATTGATGAATTTTGTTAT+GGG | + | chr7.3:88585565-88585584 | MS.gene79650:intron | 15.0% |
| !!! | TTTATTGATGAATTTTGTTA+TGG | + | chr7.3:88585564-88585583 | MS.gene79650:intron | 15.0% |
| !!! | TTTTGTTTATTTCATTTTCA+TGG | + | chr7.3:88587083-88587102 | MS.gene79650:intron | 15.0% |
| !!! | TTTTTTATTTATTTGCTGAA+TGG | + | chr7.3:88586068-88586087 | MS.gene79650:intron | 15.0% |
| !!! | TTTTTTGTTGGAAATTTTTA+GGG | + | chr7.3:88585283-88585302 | MS.gene79650:intron | 15.0% |
| !!! | TTTTTTTGTTGGAAATTTTT+AGG | + | chr7.3:88585282-88585301 | MS.gene79650:intron | 15.0% |
| !! | AAATTAATATTGACACATAG+TGG | + | chr7.3:88588923-88588942 | MS.gene79650:intron | 20.0% |
| !! | AATTATTTATTGCTAAACAG+AGG | - | chr7.3:88587756-88587775 | None:intergenic | 20.0% |
| !! | ATAAAACAATTCAATGTCAA+AGG | - | chr7.3:88588073-88588092 | None:intergenic | 20.0% |
| !! | ATTAAGAGTAACAATAATCA+AGG | + | chr7.3:88585852-88585871 | MS.gene79650:intron | 20.0% |
| !! | GTTTATGTAATGTAATGTAT+CGG | + | chr7.3:88587710-88587729 | MS.gene79650:intron | 20.0% |
| !!! | AAATTTTCGAGTTTTAGTTT+TGG | + | chr7.3:88585512-88585531 | MS.gene79650:intron | 20.0% |
| !!! | AATCAAGTTTAGTTTATACT+AGG | - | chr7.3:88586466-88586485 | None:intergenic | 20.0% |
| !!! | AATTTTCGAGTTTTAGTTTT+GGG | + | chr7.3:88585513-88585532 | MS.gene79650:intron | 20.0% |
| !!! | ATGTATTTCTTTTGTTGAAA+AGG | + | chr7.3:88586176-88586195 | MS.gene79650:intron | 20.0% |
| !!! | ATTGGTTTTTTTTGTTTTGT+TGG | + | chr7.3:88585489-88585508 | MS.gene79650:intron | 20.0% |
| !!! | CATGTTATGTTCTTTAAAAT+GGG | + | chr7.3:88586210-88586229 | MS.gene79650:intron | 20.0% |
| !!! | GAAATTTTTTTTTTGTTTGC+AGG | - | chr7.3:88586774-88586793 | None:intergenic | 20.0% |
| !!! | GAAGTTTTGATTTTTCTTTT+TGG | + | chr7.3:88585368-88585387 | MS.gene79650:intron | 20.0% |
| !!! | TAGATTGTAGTTTTTTTGTT+CGG | + | chr7.3:88586325-88586344 | MS.gene79650:intron | 20.0% |
| !!! | TCAATCAATGTTTTTTTTGT+TGG | + | chr7.3:88585271-88585290 | MS.gene79650:intron | 20.0% |
| !!! | TTTTACTTATGAATGGTTAT+TGG | + | chr7.3:88585632-88585651 | MS.gene79650:intron | 20.0% |
| !!! | TTTTCCATGAAAATTCTAAT+GGG | + | chr7.3:88585394-88585413 | MS.gene79650:intron | 20.0% |
| !!! | TTTTCTTTACGTATTGTAAT+TGG | + | chr7.3:88585439-88585458 | MS.gene79650:intron | 20.0% |
| !!! | TTTTTCCATGAAAATTCTAA+TGG | + | chr7.3:88585393-88585412 | MS.gene79650:intron | 20.0% |
| !!! | TTTTTTGTTCGGATAAAAAA+TGG | + | chr7.3:88586336-88586355 | MS.gene79650:intron | 20.0% |
| ! | ACAAAAAAAACCTAAAGTGA+AGG | - | chr7.3:88587069-88587088 | None:intergenic | 25.0% |
| ! | ACAAAAACAGGTATACTTAA+GGG | - | chr7.3:88589150-88589169 | None:intergenic | 25.0% |
| ! | AGTAGAACTATCATATGTAA+TGG | - | chr7.3:88588899-88588918 | None:intergenic | 25.0% |
| ! | ATAAAATCAAAATGCAACTG+AGG | - | chr7.3:88585926-88585945 | None:intergenic | 25.0% |
| ! | ATGCAACTAAAGAAACATTT+AGG | - | chr7.3:88586390-88586409 | None:intergenic | 25.0% |
| ! | CAATAATGCACATTTAATCT+CGG | + | chr7.3:88589091-88589110 | MS.gene79650:intron | 25.0% |
| ! | CACAGAAAATTATGCAAAAA+AGG | - | chr7.3:88587357-88587376 | None:intergenic | 25.0% |
| ! | CGAAAACTTATGATGTAAAA+TGG | - | chr7.3:88588462-88588481 | None:intergenic | 25.0% |
| ! | CTACTTGTAAAATCCAAAAA+TGG | - | chr7.3:88586499-88586518 | None:intergenic | 25.0% |
| ! | GTGAAAAGATTATAGGAATA+TGG | - | chr7.3:88588309-88588328 | None:intergenic | 25.0% |
| ! | TAAAGAAACATTTAGGGAAA+AGG | - | chr7.3:88586383-88586402 | None:intergenic | 25.0% |
| ! | TACAAAAACAGGTATACTTA+AGG | - | chr7.3:88589151-88589170 | None:intergenic | 25.0% |
| ! | TGCAACTAAAGAAACATTTA+GGG | - | chr7.3:88586389-88586408 | None:intergenic | 25.0% |
| ! | TTCTTATGATACCAAACTTA+GGG | + | chr7.3:88588729-88588748 | MS.gene79650:CDS | 25.0% |
| ! | TTTAATGTAAATGCAAAGTC+TGG | + | chr7.3:88586544-88586563 | MS.gene79650:intron | 25.0% |
| ! | TTTCTTATGATACCAAACTT+AGG | + | chr7.3:88588728-88588747 | MS.gene79650:CDS | 25.0% |
| ! | TTTGTGTTGGATTATAGTAT+GGG | + | chr7.3:88589203-88589222 | MS.gene79650:intron | 25.0% |
| !! | AAAACCCATTAGAATTTTCA+TGG | - | chr7.3:88585401-88585420 | None:intergenic | 25.0% |
| !! | GCATGTTATGTTCTTTAAAA+TGG | + | chr7.3:88586209-88586228 | MS.gene79650:intron | 25.0% |
| !! | TTTGCATAATTTTCTGTGTT+TGG | + | chr7.3:88587359-88587378 | MS.gene79650:intron | 25.0% |
| !! | TTTGTTCTGTTTTATGAAAC+AGG | + | chr7.3:88588585-88588604 | MS.gene79650:intron | 25.0% |
| !! | TTTTGTGTTGGATTATAGTA+TGG | + | chr7.3:88589202-88589221 | MS.gene79650:intron | 25.0% |
| !!! | AATTTTGTTATGGGTATTGT+TGG | + | chr7.3:88585574-88585593 | MS.gene79650:intron | 25.0% |
| !!! | CATTTTTAGCTATAGTTTGT+TGG | + | chr7.3:88587009-88587028 | MS.gene79650:intron | 25.0% |
| !!! | GGAAATTTTTAGGGTTTTAT+TGG | + | chr7.3:88585292-88585311 | MS.gene79650:intron | 25.0% |
| !!! | GTTCTTTAAAATGGGAAAAA+GGG | + | chr7.3:88586218-88586237 | MS.gene79650:intron | 25.0% |
| !!! | GTTTTGATGAAATCTGTAAT+GGG | + | chr7.3:88585328-88585347 | MS.gene79650:intron | 25.0% |
| !!! | TGTTCTTTAAAATGGGAAAA+AGG | + | chr7.3:88586217-88586236 | MS.gene79650:intron | 25.0% |
| !!! | TGTTTTGATGAAATCTGTAA+TGG | + | chr7.3:88585327-88585346 | MS.gene79650:intron | 25.0% |
| AAAACCACATAAACACACAA+AGG | - | chr7.3:88586025-88586044 | None:intergenic | 30.0% | |
| AAAGCGATATGAATACAATG+TGG | - | chr7.3:88587602-88587621 | None:intergenic | 30.0% | |
| AACAAACAATTTAACAGCCA+TGG | - | chr7.3:88588571-88588590 | None:intergenic | 30.0% | |
| AGGAAATCAATGCAAATTAC+AGG | - | chr7.3:88587271-88587290 | None:intergenic | 30.0% | |
| ATCCAACACAAACAAAACAT+TGG | - | chr7.3:88589277-88589296 | None:intergenic | 30.0% | |
| ATGTTTCTTTAGTTGCATGA+TGG | + | chr7.3:88586392-88586411 | MS.gene79650:intron | 30.0% | |
| CAAATATCAAAACGTGCTTT+AGG | + | chr7.3:88586820-88586839 | MS.gene79650:intron | 30.0% | |
| CACTTCAGTGAAAAGATTAT+AGG | - | chr7.3:88588316-88588335 | None:intergenic | 30.0% | |
| CTACATTATAAGTGCAACAA+CGG | - | chr7.3:88587152-88587171 | None:intergenic | 30.0% | |
| GAGCTAACAAAATCTAATGT+TGG | + | chr7.3:88588751-88588770 | MS.gene79650:CDS | 30.0% | |
| GTACAAAATTGCACAAATTC+AGG | + | chr7.3:88586982-88587001 | MS.gene79650:intron | 30.0% | |
| GTTTGTGTTGGATTATAGTA+TGG | + | chr7.3:88589284-88589303 | MS.gene79650:intron | 30.0% | |
| TGAACAATGTGTACAAAAAC+AGG | - | chr7.3:88589162-88589181 | None:intergenic | 30.0% | |
| TGATAAGAACAGATTGACTA+GGG | - | chr7.3:88588132-88588151 | None:intergenic | 30.0% | |
| TTAATCGTTTCGGATTGTTA+TGG | + | chr7.3:88587541-88587560 | MS.gene79650:intron | 30.0% | |
| TTTCACACTAACATGATTGT+TGG | + | chr7.3:88588873-88588892 | MS.gene79650:intron | 30.0% | |
| TTTGCATGTAAAGGAAAAAC+CGG | - | chr7.3:88588211-88588230 | None:intergenic | 30.0% | |
| ! | AAACTGCAATTTTCCATGAT+TGG | + | chr7.3:88589068-88589087 | MS.gene79650:intron | 30.0% |
| ! | ATAGAAGTTGATCTATCAAG+AGG | - | chr7.3:88587322-88587341 | None:intergenic | 30.0% |
| ! | GTAGTTTTTGTTCTTCAACT+GGG | - | chr7.3:88587867-88587886 | None:intergenic | 30.0% |
| ! | GTTGGGTTTTTACTTATGAA+TGG | + | chr7.3:88585625-88585644 | MS.gene79650:intron | 30.0% |
| ! | TACCAAAAGTACAAGAACTT+TGG | - | chr7.3:88588240-88588259 | None:intergenic | 30.0% |
| ! | TAGAAGTTGATCTATCAAGA+GGG | - | chr7.3:88587321-88587340 | None:intergenic | 30.0% |
| ! | TGTAGTTTTTGTTCTTCAAC+TGG | - | chr7.3:88587868-88587887 | None:intergenic | 30.0% |
| ! | TTTTGTAGATCTGTTGTTCA+AGG | + | chr7.3:88585693-88585712 | MS.gene79650:intron | 30.0% |
| !! | ACTTTTGAAGATTATTGGGT+CGG | + | chr7.3:88586851-88586870 | MS.gene79650:intron | 30.0% |
| !! | ATTCATATCGCTTTTAAGTG+TGG | + | chr7.3:88587608-88587627 | MS.gene79650:intron | 30.0% |
| !! | CTTGTTTCTTTTGTTTCAAC+CGG | + | chr7.3:88588189-88588208 | MS.gene79650:intron | 30.0% |
| !! | TTAGGTTGAAGTTTACGTAA+TGG | + | chr7.3:88587683-88587702 | MS.gene79650:intron | 30.0% |
| !! | TTTATCAAAGATGACTTGCT+TGG | + | chr7.3:88588781-88588800 | MS.gene79650:CDS | 30.0% |
| !!! | AATGGGTTTTGTTTGTTCAT+TGG | + | chr7.3:88585411-88585430 | MS.gene79650:intron | 30.0% |
| !!! | ATGGGTTTTGTTTGTTTTGT+TGG | + | chr7.3:88585346-88585365 | MS.gene79650:intron | 30.0% |
| !!! | TCTCTGTATGTTGTTTTAGT+TGG | + | chr7.3:88586117-88586136 | MS.gene79650:intron | 30.0% |
| !!! | TTCCAATGTTTTGTTTGTGT+TGG | + | chr7.3:88589272-88589291 | MS.gene79650:intron | 30.0% |
| AAAAACCTAAAGTGAAGGCT+AGG | - | chr7.3:88587064-88587083 | None:intergenic | 35.0% | |
| AAAACAGGTATACTTAAGGG+AGG | - | chr7.3:88589147-88589166 | None:intergenic | 35.0% | |
| AAAGAAAGGTGAACTGTTTG+TGG | + | chr7.3:88587829-88587848 | MS.gene79650:CDS | 35.0% | |
| AAAGTACAAGAACTTTGGTC+TGG | - | chr7.3:88588235-88588254 | None:intergenic | 35.0% | |
| AACCGATAAACACACTCTTA+AGG | - | chr7.3:88588016-88588035 | None:intergenic | 35.0% | |
| AACCTTATTCCATCAACAAG+TGG | - | chr7.3:88587492-88587511 | None:intergenic | 35.0% | |
| AAGAAAGGTGAACTGTTTGT+GGG | + | chr7.3:88587830-88587849 | MS.gene79650:CDS | 35.0% | |
| ACATCATCAGGTACAAAGAA+AGG | + | chr7.3:88587815-88587834 | MS.gene79650:CDS | 35.0% | |
| ACCGATAAACACACTCTTAA+GGG | - | chr7.3:88588015-88588034 | None:intergenic | 35.0% | |
| ACTTTGCAATACGAATGCTT+AGG | + | chr7.3:88587665-88587684 | MS.gene79650:intron | 35.0% | |
| AGCATTCGTATTGCAAAGTA+TGG | - | chr7.3:88587664-88587683 | None:intergenic | 35.0% | |
| ATATAATCAAAATGCCACCG+AGG | - | chr7.3:88586158-88586177 | None:intergenic | 35.0% | |
| ATGTGCATTATTGCCAATCA+TGG | - | chr7.3:88589084-88589103 | None:intergenic | 35.0% | |
| CAAAGTAGAGTGTAGTTCAA+CGG | + | chr7.3:88586703-88586722 | MS.gene79650:intron | 35.0% | |
| CCAACGCAAAAACAAAACAT+TGG | - | chr7.3:88589359-88589378 | None:intergenic | 35.0% | |
| GATCCATTGACAACATTGAA+GGG | + | chr7.3:88589551-88589570 | MS.gene79650:CDS | 35.0% | |
| GCATTCGTATTGCAAAGTAT+GGG | - | chr7.3:88587663-88587682 | None:intergenic | 35.0% | |
| GTATGCGTGTTTAATCGTTT+CGG | + | chr7.3:88587531-88587550 | MS.gene79650:intron | 35.0% | |
| GTATGCTATTACTGTATGCA+AGG | + | chr7.3:88586601-88586620 | MS.gene79650:intron | 35.0% | |
| GTGATAAGAACAGATTGACT+AGG | - | chr7.3:88588133-88588152 | None:intergenic | 35.0% | |
| TAGTTTGACAATTCTGTACG+AGG | - | chr7.3:88587964-88587983 | None:intergenic | 35.0% | |
| TATTGCAAAGTATGGGATAC+AGG | - | chr7.3:88587656-88587675 | None:intergenic | 35.0% | |
| TGAACAGTGAGTACAAAAAC+AGG | - | chr7.3:88589246-88589265 | None:intergenic | 35.0% | |
| TGTTCCTTTGTGTGTTTATG+TGG | + | chr7.3:88586018-88586037 | MS.gene79650:intron | 35.0% | |
| ! | AAATTACAGGAAGCGCAAAA+AGG | - | chr7.3:88587258-88587277 | None:intergenic | 35.0% |
| ! | AACCTTAGCACTCTTTTCAA+TGG | - | chr7.3:88589672-88589691 | None:intergenic | 35.0% |
| ! | ACCCTTAAGAGTGTGTTTAT+CGG | + | chr7.3:88588011-88588030 | MS.gene79650:intron | 35.0% |
| ! | ATTCTATTTGATTTCCCAGC+AGG | + | chr7.3:88587172-88587191 | MS.gene79650:intron | 35.0% |
| ! | GAAATGGTGATGAGTGATTT+AGG | - | chr7.3:88589629-88589648 | None:intergenic | 35.0% |
| ! | GACCAAAGTTCTTGTACTTT+TGG | + | chr7.3:88588235-88588254 | MS.gene79650:intron | 35.0% |
| ! | GTCAACTTATCTGGTGTTTT+TGG | + | chr7.3:88588676-88588695 | MS.gene79650:CDS | 35.0% |
| ! | GTTCTGTTTTATGAAACAGG+TGG | + | chr7.3:88588588-88588607 | MS.gene79650:intron | 35.0% |
| ! | GTTTATTGTCCACTTGTTGA+TGG | + | chr7.3:88587480-88587499 | MS.gene79650:intron | 35.0% |
| ! | TTCTATTTGATTTCCCAGCA+GGG | + | chr7.3:88587173-88587192 | MS.gene79650:intron | 35.0% |
| ! | TTGTGCAATTTTGTACTGCA+AGG | - | chr7.3:88586978-88586997 | None:intergenic | 35.0% |
| ! | TTTTGTTAGCTCCCTAAGTT+TGG | - | chr7.3:88588743-88588762 | None:intergenic | 35.0% |
| !! | ATTGAAAAGAGTGCTAAGGT+TGG | + | chr7.3:88589671-88589690 | MS.gene79650:CDS | 35.0% |
| !! | GCTTCATAGACATTTGTTGT+TGG | + | chr7.3:88587386-88587405 | MS.gene79650:intron | 35.0% |
| !! | GCTTTTGGTGATTGATCTTT+GGG | + | chr7.3:88587294-88587313 | MS.gene79650:intron | 35.0% |
| !!! | CATTGATTTCCTTTCGCTTT+TGG | + | chr7.3:88587279-88587298 | MS.gene79650:intron | 35.0% |
| !!! | CCAATGTTTTGTTTTTGCGT+TGG | + | chr7.3:88589356-88589375 | MS.gene79650:intron | 35.0% |
| !!! | GCTTATGTTTCTGTTGCTTT+TGG | + | chr7.3:88586240-88586259 | MS.gene79650:intron | 35.0% |
| !!! | TATGATTTGCTTTTGTGTGC+AGG | + | chr7.3:88589390-88589409 | MS.gene79650:intron | 35.0% |
| AAAATTCCTGATCCAGCATC+TGG | + | chr7.3:88588419-88588438 | MS.gene79650:CDS | 40.0% | |
| AAACCTAGTGCCAAAATGGT+AGG | - | chr7.3:88587213-88587232 | None:intergenic | 40.0% | |
| AAATTCCTGATCCAGCATCT+GGG | + | chr7.3:88588420-88588439 | MS.gene79650:CDS | 40.0% | |
| AACCCAGTTGTCAACTTATC+TGG | + | chr7.3:88588667-88588686 | MS.gene79650:CDS | 40.0% | |
| AATTCAACTCACAACTCCAG+TGG | - | chr7.3:88585761-88585780 | None:intergenic | 40.0% | |
| ACTAATGCTCTTGCATTTGG+TGG | + | chr7.3:88588700-88588719 | MS.gene79650:CDS | 40.0% | |
| AGACACTGTCTTCATTGTAG+CGG | + | chr7.3:88587576-88587595 | MS.gene79650:intron | 40.0% | |
| AGAGAGAACAACTTCACACT+TGG | + | chr7.3:88589512-88589531 | MS.gene79650:CDS | 40.0% | |
| AGTAGCTAGAGTGAGAACAT+TGG | + | chr7.3:88586677-88586696 | MS.gene79650:intron | 40.0% | |
| ATTATAAGTGCAACAACGGC+AGG | - | chr7.3:88587148-88587167 | None:intergenic | 40.0% | |
| ATTCAACTCACAACTCCAGT+GGG | - | chr7.3:88585760-88585779 | None:intergenic | 40.0% | |
| CAAAGTATGGGATACAGGTT+AGG | - | chr7.3:88587651-88587670 | None:intergenic | 40.0% | |
| CAATACTTGCATGACTATGC+TGG | + | chr7.3:88588616-88588635 | MS.gene79650:CDS | 40.0% | |
| CTATTACTGTATGCAAGGTC+TGG | + | chr7.3:88586606-88586625 | MS.gene79650:intron | 40.0% | |
| CTTATAATAGCCTTCACACC+AGG | - | chr7.3:88588395-88588414 | None:intergenic | 40.0% | |
| GATAAACACACTCTTAAGGG+TGG | - | chr7.3:88588012-88588031 | None:intergenic | 40.0% | |
| GATCAATCACCAAAAGCGAA+AGG | - | chr7.3:88587291-88587310 | None:intergenic | 40.0% | |
| GGAACTAATGCTCTTGCATT+TGG | + | chr7.3:88588697-88588716 | MS.gene79650:CDS | 40.0% | |
| GGATACAGGTTAGGAACATA+AGG | - | chr7.3:88587642-88587661 | None:intergenic | 40.0% | |
| GGATCCATTGACAACATTGA+AGG | + | chr7.3:88589550-88589569 | MS.gene79650:CDS | 40.0% | |
| GTCACTAAAGTCCTTGCTTT+CGG | + | chr7.3:88586748-88586767 | MS.gene79650:intron | 40.0% | |
| TCAATGGATCCAATGCATGT+TGG | - | chr7.3:88589541-88589560 | None:intergenic | 40.0% | |
| TCGCATTAGATAGCATGTTG+CGG | - | chr7.3:88588997-88589016 | None:intergenic | 40.0% | |
| TGCAAAACCTAGTGCCAAAA+TGG | - | chr7.3:88587217-88587236 | None:intergenic | 40.0% | |
| TGCTAAGGTTGGATTGAGTT+TGG | + | chr7.3:88589682-88589701 | MS.gene79650:CDS | 40.0% | |
| TGCTTGTGTACTCTGCATAT+AGG | + | chr7.3:88586916-88586935 | MS.gene79650:intron | 40.0% | |
| TTAGATGCGTTCAGAACAGA+GGG | - | chr7.3:88587110-88587129 | None:intergenic | 40.0% | |
| TTTAACAGCCATGGAGTAAG+AGG | - | chr7.3:88588562-88588581 | None:intergenic | 40.0% | |
| TTTGTGTGCAGGAATGAGAA+AGG | + | chr7.3:88589401-88589420 | MS.gene79650:intron | 40.0% | |
| ! | ACACCAGATAAGTTGACAAC+TGG | - | chr7.3:88588673-88588692 | None:intergenic | 40.0% |
| ! | CACCAGATAAGTTGACAACT+GGG | - | chr7.3:88588672-88588691 | None:intergenic | 40.0% |
| ! | GCATGATGGAAATGAGATAC+TGG | + | chr7.3:88586406-88586425 | MS.gene79650:intron | 40.0% |
| ! | GTCCACTTGTTGATGGAATA+AGG | + | chr7.3:88587487-88587506 | MS.gene79650:intron | 40.0% |
| !! | CGCTTTTGGTGATTGATCTT+TGG | + | chr7.3:88587293-88587312 | MS.gene79650:intron | 40.0% |
| !! | TGTGTCTACTTTGAAGTCAG+CGG | - | chr7.3:88587891-88587910 | None:intergenic | 40.0% |
| !!! | TGGTCTGGTTTTGCATGTAA+AGG | - | chr7.3:88588220-88588239 | None:intergenic | 40.0% |
| AAAATGGTAGGCAGGGGAAA+AGG | - | chr7.3:88587201-88587220 | None:intergenic | 45.0% | |
| AAATGGTAGGCAGGGGAAAA+GGG | - | chr7.3:88587200-88587219 | None:intergenic | 45.0% | |
| ACTTTAGTGACTTTGCCCTG+GGG | - | chr7.3:88586739-88586758 | None:intergenic | 45.0% | |
| AGAGTGTAGTTCAACGGATC+AGG | + | chr7.3:88586709-88586728 | MS.gene79650:intron | 45.0% | |
| AGGTAGAGACGGTAAACTTC+TGG | - | chr7.3:88585732-88585751 | None:intergenic | 45.0% | |
| CAGTGATGGTTGTGAAAAGC+TGG | - | chr7.3:88588358-88588377 | None:intergenic | 45.0% | |
| CATGACTATGCTGGAGTAAG+CGG | + | chr7.3:88588625-88588644 | MS.gene79650:CDS | 45.0% | |
| CGACCCTTCAATGTTGTCAA+TGG | - | chr7.3:88589557-88589576 | None:intergenic | 45.0% | |
| CTACAGGCTATCACATCATC+AGG | + | chr7.3:88587803-88587822 | MS.gene79650:intron | 45.0% | |
| CTCACTGTGTATTGTGCTAC+AGG | + | chr7.3:88587787-88587806 | MS.gene79650:intron | 45.0% | |
| GACTTTAGTGACTTTGCCCT+GGG | - | chr7.3:88586740-88586759 | None:intergenic | 45.0% | |
| GAGTGTAGTTCAACGGATCA+GGG | + | chr7.3:88586710-88586729 | MS.gene79650:intron | 45.0% | |
| GATCTCTTCCTCTTACTCCA+TGG | + | chr7.3:88588551-88588570 | MS.gene79650:intron | 45.0% | |
| GGAAGATTTGTGTGCTTCCT+CGG | + | chr7.3:88586138-88586157 | MS.gene79650:intron | 45.0% | |
| GTTAGATGCGTTCAGAACAG+AGG | - | chr7.3:88587111-88587130 | None:intergenic | 45.0% | |
| TAGATGCGTTCAGAACAGAG+GGG | - | chr7.3:88587109-88587128 | None:intergenic | 45.0% | |
| TAGTGCCAAAATGGTAGGCA+GGG | - | chr7.3:88587208-88587227 | None:intergenic | 45.0% | |
| TATCTTACCTTCCCAGATGC+TGG | - | chr7.3:88588434-88588453 | None:intergenic | 45.0% | |
| TATGCTGTTACTGCGAAGTC+TGG | + | chr7.3:88586573-88586592 | MS.gene79650:intron | 45.0% | |
| TTCTACTGAGCTAGACACCA+AGG | + | chr7.3:88589646-88589665 | MS.gene79650:CDS | 45.0% | |
| ! | AGCACTCTTTTCAATGGCCT+TGG | - | chr7.3:88589666-88589685 | None:intergenic | 45.0% |
| ! | GGTGTCTAGCTCAGTAGAAA+TGG | - | chr7.3:88589645-88589664 | None:intergenic | 45.0% |
| ! | TTTTCCCCTGCCTACCATTT+TGG | + | chr7.3:88587200-88587219 | MS.gene79650:intron | 45.0% |
| !! | ACTGCTGTTGGTGTTGACAT+GGG | + | chr7.3:88589473-88589492 | MS.gene79650:CDS | 45.0% |
| !! | ACTTGGTGTCCAACATGCAT+TGG | + | chr7.3:88589529-88589548 | MS.gene79650:CDS | 45.0% |
| !! | CACTCTAAAACAGAGCACCT+GGG | - | chr7.3:88586890-88586909 | None:intergenic | 45.0% |
| !! | GGCCATTGAAAAGAGTGCTA+AGG | + | chr7.3:88589667-88589686 | MS.gene79650:CDS | 45.0% |
| !! | TCACTCTAAAACAGAGCACC+TGG | - | chr7.3:88586891-88586910 | None:intergenic | 45.0% |
| !! | TGCGAAGTGTTGTCAAACAG+AGG | + | chr7.3:88589012-88589031 | MS.gene79650:intron | 45.0% |
| !!! | TGCTCTGTTTTAGAGTGACC+TGG | + | chr7.3:88586893-88586912 | MS.gene79650:intron | 45.0% |
| !!! | ATTTTATGTTTTTTTTTTAA+AGG | + | chr7.3:88585939-88585958 | MS.gene79650:intron | 5.0% |
| AGATTTGTGTGCTTCCTCGG+TGG | + | chr7.3:88586141-88586160 | MS.gene79650:intron | 50.0% | |
| AGTGCCAAAATGGTAGGCAG+GGG | - | chr7.3:88587207-88587226 | None:intergenic | 50.0% | |
| AGTGGGTGAGTAGGTAGAGA+CGG | - | chr7.3:88585743-88585762 | None:intergenic | 50.0% | |
| ATGCAGAGTACACAAGCACC+AGG | - | chr7.3:88586914-88586933 | None:intergenic | 50.0% | |
| CTAGTGCCAAAATGGTAGGC+AGG | - | chr7.3:88587209-88587228 | None:intergenic | 50.0% | |
| CTGGAGTAAGCGGCAACATT+GGG | + | chr7.3:88588635-88588654 | MS.gene79650:CDS | 50.0% | |
| GAACGCATCTAACTTCCCCT+TGG | + | chr7.3:88587118-88587137 | MS.gene79650:intron | 50.0% | |
| GACATCGGCAAGAAAGCTAG+AGG | + | chr7.3:88585227-88585246 | MS.gene79650:CDS | 50.0% | |
| GGACTTTAGTGACTTTGCCC+TGG | - | chr7.3:88586741-88586760 | None:intergenic | 50.0% | |
| GTCAACACCAACAGCAGTGT+TGG | - | chr7.3:88589471-88589490 | None:intergenic | 50.0% | |
| TCGTATCACCAACTCAGCCA+AGG | + | chr7.3:88589574-88589593 | MS.gene79650:CDS | 50.0% | |
| TTGTTTGCAGGCCGAAAGCA+AGG | - | chr7.3:88586762-88586781 | None:intergenic | 50.0% | |
| ! | GCTAGCCTAGCCTTCACTTT+AGG | + | chr7.3:88587056-88587075 | MS.gene79650:intron | 50.0% |
| !! | ACCAACAGCAGTGTTGGTCA+CGG | - | chr7.3:88589465-88589484 | None:intergenic | 50.0% |
| !! | AGGAAGCGCAAAAAGGCATC+AGG | - | chr7.3:88587251-88587270 | None:intergenic | 50.0% |
| !! | CACTGCTGTTGGTGTTGACA+TGG | + | chr7.3:88589472-88589491 | MS.gene79650:CDS | 50.0% |
| !! | CTGCCTACCATTTTGGCACT+AGG | + | chr7.3:88587207-88587226 | MS.gene79650:intron | 50.0% |
| !! | GGAAGCGCAAAAAGGCATCA+GGG | - | chr7.3:88587250-88587269 | None:intergenic | 50.0% |
| !!! | GCTTTTGGTGCTTTGCTGTG+AGG | + | chr7.3:88586255-88586274 | MS.gene79650:intron | 50.0% |
| ACCTTCCCAGATGCTGGATC+AGG | - | chr7.3:88588428-88588447 | None:intergenic | 55.0% | |
| ACGCCACTCGTGCTGGATAA+GGG | - | chr7.3:88589606-88589625 | None:intergenic | 55.0% | |
| ATAGCCTTCACACCAGGAGC+AGG | - | chr7.3:88588389-88588408 | None:intergenic | 55.0% | |
| CACAACTCCAGTGGGTGAGT+AGG | - | chr7.3:88585752-88585771 | None:intergenic | 55.0% | |
| CCCGGTCTCTACTCTGACAT+CGG | + | chr7.3:88585212-88585231 | MS.gene79650:CDS | 55.0% | |
| CCGATGTCAGAGTAGAGACC+GGG | - | chr7.3:88585215-88585234 | None:intergenic | 55.0% | |
| CTTCACACCAGGAGCAGGTT+CGG | - | chr7.3:88588384-88588403 | None:intergenic | 55.0% | |
| GCCGATGTCAGAGTAGAGAC+CGG | - | chr7.3:88585216-88585235 | None:intergenic | 55.0% | |
| GCTGGAGTAAGCGGCAACAT+TGG | + | chr7.3:88588634-88588653 | MS.gene79650:CDS | 55.0% | |
| GTCTCTACCTACTCACCCAC+TGG | + | chr7.3:88585742-88585761 | MS.gene79650:CDS | 55.0% | |
| TCCTGATCCAGCATCTGGGA+AGG | + | chr7.3:88588424-88588443 | MS.gene79650:CDS | 55.0% | |
| TTAGTGACTTTGCCCTGGGG+TGG | - | chr7.3:88586736-88586755 | None:intergenic | 55.0% | |
| TTATTGGGTCGGCCCTGCAA+CGG | + | chr7.3:88586862-88586881 | MS.gene79650:intron | 55.0% | |
| ! | ATTTAGGACGCCACTCGTGC+TGG | - | chr7.3:88589613-88589632 | None:intergenic | 55.0% |
| !! | AGCAGGTTCGGTGACAGTGA+TGG | - | chr7.3:88588372-88588391 | None:intergenic | 55.0% |
| !! | CAACAGCAGTGTTGGTCACG+GGG | - | chr7.3:88589463-88589482 | None:intergenic | 55.0% |
| !! | CCAACAGCAGTGTTGGTCAC+GGG | - | chr7.3:88589464-88589483 | None:intergenic | 55.0% |
| !! | CTGGATAAGGGCACTTGCCT+TGG | - | chr7.3:88589594-88589613 | None:intergenic | 55.0% |
| AACAACGGCAGGCGAGCCAA+GGG | - | chr7.3:88587137-88587156 | None:intergenic | 60.0% | |
| ACTGTCACCGAACCTGCTCC+TGG | + | chr7.3:88588374-88588393 | MS.gene79650:CDS | 60.0% | |
| AGCACCTGGGATCCGTTGCA+GGG | - | chr7.3:88586877-88586896 | None:intergenic | 60.0% | |
| AGGGGAAAAGGGACCCTGCT+GGG | - | chr7.3:88587189-88587208 | None:intergenic | 60.0% | |
| CCCGTGACCAACACTGCTGT+TGG | + | chr7.3:88589461-88589480 | MS.gene79650:CDS | 60.0% | |
| CGAACCTGCTCCTGGTGTGA+AGG | + | chr7.3:88588382-88588401 | MS.gene79650:CDS | 60.0% | |
| GACGCCACTCGTGCTGGATA+AGG | - | chr7.3:88589607-88589626 | None:intergenic | 60.0% | |
| GGCACTTGCCTTGGCTGAGT+TGG | - | chr7.3:88589585-88589604 | None:intergenic | 60.0% | |
| GTGCCCTTATCCAGCACGAG+TGG | + | chr7.3:88589600-88589619 | MS.gene79650:CDS | 60.0% | |
| AACGGATCAGGGCCACCCCA+GGG | + | chr7.3:88586721-88586740 | MS.gene79650:intron | 65.0% | |
| ACAACGGCAGGCGAGCCAAG+GGG | - | chr7.3:88587136-88587155 | None:intergenic | 65.0% | |
| CAACAACGGCAGGCGAGCCA+AGG | - | chr7.3:88587138-88587157 | None:intergenic | 65.0% | |
| CAGGGGAAAAGGGACCCTGC+TGG | - | chr7.3:88587190-88587209 | None:intergenic | 65.0% | |
| GAGCACCTGGGATCCGTTGC+AGG | - | chr7.3:88586878-88586897 | None:intergenic | 65.0% | |
| CAACGGATCAGGGCCACCCC+AGG | + | chr7.3:88586720-88586739 | MS.gene79650:intron | 70.0% | |
| TCGGCCCTGCAACGGATCCC+AGG | + | chr7.3:88586870-88586889 | MS.gene79650:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 88585197 | 88589718 | 88585197 | ID=MS.gene79650 |
| chr7.3 | mRNA | 88585197 | 88589718 | 88585197 | ID=MS.gene79650.t1;Parent=MS.gene79650 |
| chr7.3 | exon | 88585197 | 88585248 | 88585197 | ID=MS.gene79650.t1.exon1;Parent=MS.gene79650.t1 |
| chr7.3 | CDS | 88585197 | 88585248 | 88585197 | ID=cds.MS.gene79650.t1;Parent=MS.gene79650.t1 |
| chr7.3 | exon | 88585701 | 88585768 | 88585701 | ID=MS.gene79650.t1.exon2;Parent=MS.gene79650.t1 |
| chr7.3 | CDS | 88585701 | 88585768 | 88585701 | ID=cds.MS.gene79650.t1;Parent=MS.gene79650.t1 |
| chr7.3 | exon | 88587809 | 88587919 | 88587809 | ID=MS.gene79650.t1.exon3;Parent=MS.gene79650.t1 |
| chr7.3 | CDS | 88587809 | 88587919 | 88587809 | ID=cds.MS.gene79650.t1;Parent=MS.gene79650.t1 |
| chr7.3 | exon | 88588359 | 88588445 | 88588359 | ID=MS.gene79650.t1.exon4;Parent=MS.gene79650.t1 |
| chr7.3 | CDS | 88588359 | 88588445 | 88588359 | ID=cds.MS.gene79650.t1;Parent=MS.gene79650.t1 |
| chr7.3 | exon | 88588607 | 88588815 | 88588607 | ID=MS.gene79650.t1.exon5;Parent=MS.gene79650.t1 |
| chr7.3 | CDS | 88588607 | 88588815 | 88588607 | ID=cds.MS.gene79650.t1;Parent=MS.gene79650.t1 |
| chr7.3 | exon | 88589412 | 88589718 | 88589412 | ID=MS.gene79650.t1.exon6;Parent=MS.gene79650.t1 |
| chr7.3 | CDS | 88589412 | 88589718 | 88589412 | ID=cds.MS.gene79650.t1;Parent=MS.gene79650.t1 |
| Gene Sequence |
| Protein sequence |
