Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015363.t1 | XP_003611401.2 | 99.5 | 398 | 2 | 0 | 3 | 400 | 115 | 512 | 3.90E-209 | 737.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015363.t1 | Q8RY73 | 77.7 | 349 | 78 | 0 | 52 | 400 | 185 | 533 | 8.6e-165 | 581.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015363.t1 | G7JYM5 | 99.5 | 398 | 2 | 0 | 3 | 400 | 115 | 512 | 2.8e-209 | 737.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene015363 | MS.gene025936 | PPI |
| MS.gene015363 | MS.gene050621 | PPI |
| MS.gene015363 | MS.gene76412 | PPI |
| MS.gene87461 | MS.gene015363 | PPI |
| MS.gene015363 | MS.gene024471 | PPI |
| MS.gene015363 | MS.gene22822 | PPI |
| MS.gene012007 | MS.gene015363 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015363.t1 | MTR_5g013580 | 99.250 | 400 | 3 | 0 | 1 | 400 | 113 | 512 | 0.0 | 841 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015363.t1 | AT4G17620 | 73.632 | 402 | 101 | 2 | 1 | 400 | 135 | 533 | 0.0 | 585 |
| MS.gene015363.t1 | AT4G17620 | 73.134 | 402 | 103 | 2 | 1 | 400 | 135 | 533 | 0.0 | 579 |
| MS.gene015363.t1 | AT4G17620 | 72.139 | 402 | 99 | 3 | 1 | 400 | 135 | 525 | 0.0 | 563 |
Find 94 sgRNAs with CRISPR-Local
Find 307 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGCTCTCCGTCTGCTCTTC+TGG | 0.061101 | 5.4:-7461483 | None:intergenic |
| AAATCACTTTGTGGTCTTTC+TGG | 0.112221 | 5.4:-7460887 | None:intergenic |
| CATATATTTGTATAGGATTT+AGG | 0.156099 | 5.4:+7461958 | MS.gene015363:CDS |
| TTCTGTGATTAAGACAAAAT+TGG | 0.167983 | 5.4:+7461538 | MS.gene015363:CDS |
| TTTGGCAATTAGATGTTATC+TGG | 0.198464 | 5.4:+7461427 | MS.gene015363:intron |
| TATCCTCAGAGGCAGAATTT+TGG | 0.221848 | 5.4:+7458688 | MS.gene015363:CDS |
| GAGAGAAACTGCTAAAGTTT+TGG | 0.230993 | 5.4:+7461802 | MS.gene015363:CDS |
| TATTCTCTGTGTAATATCTT+TGG | 0.238375 | 5.4:-7462190 | None:intergenic |
| CTAAATCCTATACAAATATA+TGG | 0.300599 | 5.4:-7461957 | None:intergenic |
| CGCCATATCACTGAAGATAT+TGG | 0.313720 | 5.4:+7460209 | MS.gene015363:CDS |
| GTTGATTACCTACCACAAAA+TGG | 0.317863 | 5.4:-7460489 | None:intergenic |
| GGCTCTCCGTCTGCTCTTCT+GGG | 0.318433 | 5.4:-7461482 | None:intergenic |
| CGCGCCACCTTTCAACCGTT+TGG | 0.326781 | 5.4:+7462684 | MS.gene015363:CDS |
| GAGGTATTATGCTGGCTTTA+TGG | 0.328410 | 5.4:+7462510 | MS.gene015363:CDS |
| CTCCAATATCTTCAGTGATA+TGG | 0.332949 | 5.4:-7460211 | None:intergenic |
| TCTGTGATTAAGACAAAATT+GGG | 0.335148 | 5.4:+7461539 | MS.gene015363:CDS |
| CTTGCAGATTCAGTCATTCC+TGG | 0.335151 | 5.4:+7461926 | MS.gene015363:intron |
| CCGGGTTGTTCGTATTATTA+CGG | 0.353547 | 5.4:-7458582 | None:intergenic |
| CGCCATGAGCCTTGGGAAAT+GGG | 0.358477 | 5.4:+7460818 | MS.gene015363:CDS |
| TCGCCATGAGCCTTGGGAAA+TGG | 0.363810 | 5.4:+7460817 | MS.gene015363:CDS |
| AGGTGACTTGTTATTACATC+TGG | 0.374070 | 5.4:-7462730 | None:intergenic |
| CTTATATTCGCCATGAGCCT+TGG | 0.404077 | 5.4:+7460810 | MS.gene015363:CDS |
| GCTGGCATTCTTCCGCGTCC+TGG | 0.412844 | 5.4:+7458661 | MS.gene015363:CDS |
| AAATTCTGCCTCTGAGGATA+AGG | 0.415076 | 5.4:-7458685 | None:intergenic |
| TTGGCAGGGTGGAGTGTGCC+TGG | 0.423068 | 5.4:+7462476 | MS.gene015363:intron |
| GTGCCTGGCGTTTGCGGACG+AGG | 0.428434 | 5.4:+7462491 | MS.gene015363:CDS |
| ATGATGCAGGCCGTCTTGTT+CGG | 0.436710 | 5.4:+7462151 | MS.gene015363:CDS |
| AAATATATGGAACGCCTGCC+AGG | 0.440933 | 5.4:-7461944 | None:intergenic |
| CTGCGATCTAAATCACTTTG+TGG | 0.446570 | 5.4:-7460896 | None:intergenic |
| TTATATTCGCCATGAGCCTT+GGG | 0.449517 | 5.4:+7460811 | MS.gene015363:CDS |
| GCTATAGTCGTGCAGAAGGC+GGG | 0.453075 | 5.4:+7460031 | MS.gene015363:CDS |
| GGCGTTCCATATATTTGTAT+AGG | 0.453770 | 5.4:+7461951 | MS.gene015363:CDS |
| CGAAGATGGAAGACTATGTC+TGG | 0.462093 | 5.4:+7458120 | None:intergenic |
| GACTTAGGCTCAGAAGGTTA+TGG | 0.475541 | 5.4:+7460418 | MS.gene015363:intron |
| TGGAGTGTGCCTGGCGTTTG+CGG | 0.481068 | 5.4:+7462485 | MS.gene015363:CDS |
| GTTGTTCGTATTATTACGGA+TGG | 0.484281 | 5.4:-7458578 | None:intergenic |
| TTCTGGGATCTTCAGTGGCA+AGG | 0.495567 | 5.4:-7461466 | None:intergenic |
| GCCTTCTGCACGACTATAGC+AGG | 0.501287 | 5.4:-7460028 | None:intergenic |
| GGGGTGGTGGACGTGGTCGT+TGG | 0.505862 | 5.4:+7458611 | MS.gene015363:CDS |
| TTGTGTACTCCCATTTCCCA+AGG | 0.506004 | 5.4:-7460827 | None:intergenic |
| TTGGCAATTAGATGTTATCT+GGG | 0.506474 | 5.4:+7461428 | MS.gene015363:intron |
| CAGCATAATGATAGAGGAGC+TGG | 0.510421 | 5.4:+7458643 | MS.gene015363:CDS |
| TGCTATAGTCGTGCAGAAGG+CGG | 0.514503 | 5.4:+7460030 | MS.gene015363:CDS |
| TGAAGAAACTCTGTCAAGAA+AGG | 0.514756 | 5.4:+7458780 | MS.gene015363:CDS |
| GGACGTGGTCGTTGGCAACA+AGG | 0.516272 | 5.4:+7458619 | MS.gene015363:CDS |
| CTCCCATTTCCCAAGGCTCA+TGG | 0.517450 | 5.4:-7460820 | None:intergenic |
| CAAGGGCAGCATAATGATAG+AGG | 0.517610 | 5.4:+7458637 | MS.gene015363:CDS |
| AATACGAACAACCCGGGAAG+AGG | 0.518689 | 5.4:+7458589 | MS.gene015363:CDS |
| TGCCTCTGAGGATAAGGTCC+AGG | 0.524197 | 5.4:-7458679 | None:intergenic |
| TATCTTGATGGGTGCTGAGA+TGG | 0.529076 | 5.4:+7461571 | MS.gene015363:CDS |
| CAGATTCAGTCATTCCTGGC+AGG | 0.531148 | 5.4:+7461930 | MS.gene015363:intron |
| TGCTGTGATACGACTACTGA+TGG | 0.531330 | 5.4:+7461596 | MS.gene015363:CDS |
| GGGAAATGGGAGTACACAAA+AGG | 0.545125 | 5.4:+7460831 | MS.gene015363:CDS |
| ATACGAACAACCCGGGAAGA+GGG | 0.552800 | 5.4:+7458590 | MS.gene015363:CDS |
| GGGGCTCACCGTATCTTGAT+GGG | 0.555557 | 5.4:+7461560 | MS.gene015363:CDS |
| ATACCTCGTCCGCAAACGCC+AGG | 0.556805 | 5.4:-7462494 | None:intergenic |
| AGAAGTTCCAAACGGTTGAA+AGG | 0.557237 | 5.4:-7462691 | None:intergenic |
| CTGTCATACAGGGATGATGC+AGG | 0.560137 | 5.4:+7462138 | MS.gene015363:intron |
| AAAACAGACTTAGGCTCAGA+AGG | 0.561278 | 5.4:+7460412 | MS.gene015363:intron |
| TTGCGGACGAGGTATTATGC+TGG | 0.562925 | 5.4:+7462502 | MS.gene015363:CDS |
| ACGAACAACCCGGGAAGAGG+GGG | 0.566118 | 5.4:+7458592 | MS.gene015363:CDS |
| TGCTCTTCTGGGATCTTCAG+TGG | 0.571759 | 5.4:-7461471 | None:intergenic |
| CACAAAGTGATTTAGATCGC+AGG | 0.574140 | 5.4:+7460897 | MS.gene015363:CDS |
| TGAGGATAAGGTCCAGGACG+CGG | 0.577599 | 5.4:-7458673 | None:intergenic |
| CTATAGTCGTGCAGAAGGCG+GGG | 0.578781 | 5.4:+7460032 | MS.gene015363:CDS |
| GACGTGGTCGTTGGCAACAA+GGG | 0.579752 | 5.4:+7458620 | MS.gene015363:CDS |
| GAAGATCCCAGAAGAGCAGA+CGG | 0.581979 | 5.4:+7461476 | MS.gene015363:CDS |
| ATTGGAGCTGATTTGAACGA+AGG | 0.584782 | 5.4:+7460227 | MS.gene015363:CDS |
| CTATAGCAGGCAAGTTCACA+AGG | 0.584854 | 5.4:-7460015 | None:intergenic |
| TACGAACAACCCGGGAAGAG+GGG | 0.585770 | 5.4:+7458591 | MS.gene015363:CDS |
| CACAGAACAAAATTCAACAT+TGG | 0.586435 | 5.4:-7461522 | None:intergenic |
| GCCTGCTATAGTCGTGCAGA+AGG | 0.591701 | 5.4:+7460027 | MS.gene015363:CDS |
| GAGCTTGCAGAAGTTCCAAA+CGG | 0.601546 | 5.4:-7462699 | None:intergenic |
| TACCCAAAATTCTGCCTCTG+AGG | 0.603135 | 5.4:-7458691 | None:intergenic |
| TCTCAGCACCCATCAAGATA+CGG | 0.605709 | 5.4:-7461568 | None:intergenic |
| TTGGCATCAACATCATGTAT+CGG | 0.605933 | 5.4:-7461503 | None:intergenic |
| CCGTAATAATACGAACAACC+CGG | 0.607451 | 5.4:+7458582 | MS.gene015363:CDS |
| AGATGTAATAACAAGTCACC+TGG | 0.607473 | 5.4:+7462732 | MS.gene015363:CDS |
| TTCGTATTATTACGGATGGG+AGG | 0.610071 | 5.4:-7458574 | None:intergenic |
| TTGTTCGTATTATTACGGAT+GGG | 0.612923 | 5.4:-7458577 | None:intergenic |
| TTACCTTGTTCAGATTGTTG+CGG | 0.618634 | 5.4:-7460619 | None:intergenic |
| TATGGTAATAGGTTTCAGAA+TGG | 0.620990 | 5.4:+7458712 | MS.gene015363:CDS |
| CTGTGATTAAGACAAAATTG+GGG | 0.629784 | 5.4:+7461540 | MS.gene015363:CDS |
| AGTTCCAAACGGTTGAAAGG+TGG | 0.634627 | 5.4:-7462688 | None:intergenic |
| GCATTTCAGTCCGAACAAGA+CGG | 0.638960 | 5.4:-7462161 | None:intergenic |
| ATGGGAGTACACAAAAGGAA+TGG | 0.640999 | 5.4:+7460836 | MS.gene015363:CDS |
| CGTAATAATACGAACAACCC+GGG | 0.655412 | 5.4:+7458583 | MS.gene015363:CDS |
| AGACAAAACGTTCATCGCGG+TGG | 0.657013 | 5.4:-7458735 | None:intergenic |
| GTCCTGGACCTTATCCTCAG+AGG | 0.674041 | 5.4:+7458677 | MS.gene015363:CDS |
| TGTGATTAAGACAAAATTGG+GGG | 0.674231 | 5.4:+7461541 | MS.gene015363:CDS |
| AAAGTGATTTAGATCGCAGG+AGG | 0.695618 | 5.4:+7460900 | MS.gene015363:CDS |
| GTACCGCAACAATCTGAACA+AGG | 0.701773 | 5.4:+7460616 | MS.gene015363:CDS |
| GCAGTTGAATTATCATAACG+AGG | 0.728754 | 5.4:+7461767 | MS.gene015363:intron |
| CAGAGACAAAACGTTCATCG+CGG | 0.738071 | 5.4:-7458738 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTACTTGAAAAAAATTA+TGG | - | chr5.4:7461191-7461210 | None:intergenic | 10.0% |
| !! | ATCATCATTTAAAAAATTAA+TGG | - | chr5.4:7458353-7458372 | None:intergenic | 10.0% |
| !!! | ATAATTTTTTTCAAGTAAAT+TGG | + | chr5.4:7461190-7461209 | MS.gene015363:intron | 10.0% |
| !! | ATATAATAAAAAACTTAGCA+TGG | + | chr5.4:7458309-7458328 | MS.gene015363:intron | 15.0% |
| !! | ATCATAAATTAAATTACCAA+TGG | - | chr5.4:7460560-7460579 | None:intergenic | 15.0% |
| !! | TTTAAATGATGATAAATCAA+CGG | + | chr5.4:7458360-7458379 | MS.gene015363:intron | 15.0% |
| !!! | ATAAATAAGATACCTTTTTT+GGG | - | chr5.4:7460269-7460288 | None:intergenic | 15.0% |
| !!! | ATTGGTAATTTAATTTATGA+TGG | + | chr5.4:7460559-7460578 | MS.gene015363:intron | 15.0% |
| !! | AATCATCATATAGCTAATTA+AGG | + | chr5.4:7462359-7462378 | MS.gene015363:intron | 20.0% |
| !! | ATGTCTTAAAATAATCATGA+AGG | - | chr5.4:7459928-7459947 | None:intergenic | 20.0% |
| !! | CATATATTTGTATAGGATTT+AGG | + | chr5.4:7461958-7461977 | MS.gene015363:CDS | 20.0% |
| !! | CTAAATCCTATACAAATATA+TGG | - | chr5.4:7461960-7461979 | None:intergenic | 20.0% |
| !! | GAAAACTATATAATCTGAAA+TGG | + | chr5.4:7462424-7462443 | MS.gene015363:intron | 20.0% |
| !! | GAGAGAAAAAAAAAAATGAA+TGG | - | chr5.4:7460524-7460543 | None:intergenic | 20.0% |
| !! | TAAAAAGTCTCTAAATAAAC+AGG | - | chr5.4:7460187-7460206 | None:intergenic | 20.0% |
| !! | TAATTGAATATCATCTTTAG+AGG | + | chr5.4:7462383-7462402 | MS.gene015363:intron | 20.0% |
| !! | TTATCTATAAATAAACTGCT+GGG | + | chr5.4:7460285-7460304 | MS.gene015363:intron | 20.0% |
| !! | TTTATCTATAAATAAACTGC+TGG | + | chr5.4:7460284-7460303 | MS.gene015363:intron | 20.0% |
| !!! | AAAAAATGAATGGTTTTATC+TGG | - | chr5.4:7460514-7460533 | None:intergenic | 20.0% |
| !!! | AATTTTGTTTTATAATCCCA+CGG | - | chr5.4:7458277-7458296 | None:intergenic | 20.0% |
| !!! | ATAACAAACTCTATTTTGAT+TGG | - | chr5.4:7462587-7462606 | None:intergenic | 20.0% |
| !!! | GATAAATAAGATACCTTTTT+TGG | - | chr5.4:7460270-7460289 | None:intergenic | 20.0% |
| !!! | TAAAAGAAATTTTAGCACAT+GGG | - | chr5.4:7460772-7460791 | None:intergenic | 20.0% |
| !!! | TAATATGCTTTAACTAGTTT+TGG | + | chr5.4:7462025-7462044 | MS.gene015363:intron | 20.0% |
| !!! | TATGACATTTAGTGTTATTA+TGG | + | chr5.4:7459891-7459910 | MS.gene015363:intron | 20.0% |
| !!! | TCATTATCAACATAATTTGT+TGG | + | chr5.4:7462457-7462476 | MS.gene015363:intron | 20.0% |
| !!! | TCTATAGTTTTAATATTTCG+TGG | + | chr5.4:7459726-7459745 | MS.gene015363:intron | 20.0% |
| !!! | TTTCTTGATTCGTTTTTTTA+TGG | + | chr5.4:7458523-7458542 | MS.gene015363:intron | 20.0% |
| !!! | TTTGACTTGGATATTAATTA+GGG | + | chr5.4:7459365-7459384 | MS.gene015363:intron | 20.0% |
| !!! | TTTTATCTACAAGGTAATTT+AGG | + | chr5.4:7458202-7458221 | MS.gene015363:intron | 20.0% |
| !!! | TTTTTTTCAAGTAAATTGGT+TGG | + | chr5.4:7461194-7461213 | MS.gene015363:intron | 20.0% |
| ! | AAAAAGTGAAACCATAAAGT+GGG | - | chr5.4:7461374-7461393 | None:intergenic | 25.0% |
| ! | AAATACTTTCTTTGAGCAAT+AGG | - | chr5.4:7461079-7461098 | None:intergenic | 25.0% |
| ! | AAGAATTCGACAAATTGTTA+TGG | + | chr5.4:7458944-7458963 | MS.gene015363:intron | 25.0% |
| ! | ACACAGAGAATAAAAATGAA+GGG | + | chr5.4:7462201-7462220 | MS.gene015363:CDS | 25.0% |
| ! | ACTTGAAAAAAATTATGGCT+CGG | - | chr5.4:7461186-7461205 | None:intergenic | 25.0% |
| ! | AGGATACTAATGCAATAAAA+AGG | + | chr5.4:7461235-7461254 | MS.gene015363:intron | 25.0% |
| ! | AGGGATAGACTAAAATTATT+AGG | - | chr5.4:7459278-7459297 | None:intergenic | 25.0% |
| ! | AGTCTTAAAGTATATGTCTT+TGG | + | chr5.4:7461409-7461428 | MS.gene015363:intron | 25.0% |
| ! | ATAATCAGAACATATACATC+TGG | - | chr5.4:7459973-7459992 | None:intergenic | 25.0% |
| ! | ATAATCATGAAGGATGAAAA+AGG | - | chr5.4:7459918-7459937 | None:intergenic | 25.0% |
| ! | CAATAAACAAACATTAACAG+AGG | - | chr5.4:7462635-7462654 | None:intergenic | 25.0% |
| ! | CCAACATAAAACTATTCAAA+AGG | - | chr5.4:7461715-7461734 | None:intergenic | 25.0% |
| ! | CTACTTAAAAACACAAAAAG+TGG | - | chr5.4:7459176-7459195 | None:intergenic | 25.0% |
| ! | CTCTGTTAATGTTTGTTTAT+TGG | + | chr5.4:7462633-7462652 | MS.gene015363:intron | 25.0% |
| ! | CTCTTAATATTATAAGCCAT+TGG | + | chr5.4:7460541-7460560 | MS.gene015363:intron | 25.0% |
| ! | GGATTATAAAACAAAATTGC+GGG | + | chr5.4:7458279-7458298 | MS.gene015363:intron | 25.0% |
| ! | GGGATAGACTAAAATTATTA+GGG | - | chr5.4:7459277-7459296 | None:intergenic | 25.0% |
| ! | GGGATTATAAAACAAAATTG+CGG | + | chr5.4:7458278-7458297 | MS.gene015363:intron | 25.0% |
| ! | TAAAAAGTGAAACCATAAAG+TGG | - | chr5.4:7461375-7461394 | None:intergenic | 25.0% |
| ! | TACACAGAGAATAAAAATGA+AGG | + | chr5.4:7462200-7462219 | MS.gene015363:CDS | 25.0% |
| ! | TATTCTCTGTGTAATATCTT+TGG | - | chr5.4:7462193-7462212 | None:intergenic | 25.0% |
| ! | TCTGTGATTAAGACAAAATT+GGG | + | chr5.4:7461539-7461558 | MS.gene015363:CDS | 25.0% |
| ! | TTAACTGTTGGACAAATTAA+TGG | + | chr5.4:7461341-7461360 | MS.gene015363:intron | 25.0% |
| ! | TTCAAAAGGAAAACTAAATC+TGG | - | chr5.4:7461701-7461720 | None:intergenic | 25.0% |
| ! | TTCAAATTAACAGTGGAAAT+AGG | - | chr5.4:7462286-7462305 | None:intergenic | 25.0% |
| ! | TTCATATTGAGTTTGAATGT+TGG | + | chr5.4:7459631-7459650 | MS.gene015363:intron | 25.0% |
| ! | TTCTGTGATTAAGACAAAAT+TGG | + | chr5.4:7461538-7461557 | MS.gene015363:CDS | 25.0% |
| ! | TTTCTTCATTATGTTGAAAC+TGG | + | chr5.4:7458998-7459017 | MS.gene015363:intron | 25.0% |
| !! | AAGTACGAATTTTCATTGTA+AGG | - | chr5.4:7462082-7462101 | None:intergenic | 25.0% |
| !! | GAGCTTTTATTATATGTGTA+TGG | + | chr5.4:7459702-7459721 | MS.gene015363:intron | 25.0% |
| !! | GATAAAATGAAGTACCATTA+TGG | - | chr5.4:7458189-7458208 | None:intergenic | 25.0% |
| !! | TTTGACTCGAGTATTAATTA+CGG | + | chr5.4:7459076-7459095 | MS.gene015363:intron | 25.0% |
| !!! | ATGGTTTCACTTTTTATGAT+TGG | + | chr5.4:7461379-7461398 | MS.gene015363:intron | 25.0% |
| !!! | CCTTTTGAATAGTTTTATGT+TGG | + | chr5.4:7461712-7461731 | MS.gene015363:intron | 25.0% |
| !!! | GTAAAAGAAATTTTAGCACA+TGG | - | chr5.4:7460773-7460792 | None:intergenic | 25.0% |
| !!! | GTTTGACTTGGATATTAATT+AGG | + | chr5.4:7459364-7459383 | MS.gene015363:intron | 25.0% |
| !!! | GTTTTAATATTTCGTGGTTT+TGG | + | chr5.4:7459732-7459751 | MS.gene015363:intron | 25.0% |
| !!! | TATTGCTCAAAGAAAGTATT+TGG | + | chr5.4:7461078-7461097 | MS.gene015363:intron | 25.0% |
| !!! | TCATATGATTTTGTTTGACT+TGG | + | chr5.4:7459352-7459371 | MS.gene015363:intron | 25.0% |
| !!! | TTTCACTTTTTATGATTGGT+TGG | + | chr5.4:7461383-7461402 | MS.gene015363:intron | 25.0% |
| AATGTAACCAATACAACAAC+AGG | + | chr5.4:7461035-7461054 | MS.gene015363:intron | 30.0% | |
| AATTACCAGTGTTTCCTTTA+CGG | + | chr5.4:7458239-7458258 | MS.gene015363:intron | 30.0% | |
| ACAATGAAAATTCGTACTTC+TGG | + | chr5.4:7462083-7462102 | MS.gene015363:intron | 30.0% | |
| ACAGCTGAATTAAACTGAAA+TGG | - | chr5.4:7460737-7460756 | None:intergenic | 30.0% | |
| ACTGGTAATTGTTTCCTATA+AGG | - | chr5.4:7458229-7458248 | None:intergenic | 30.0% | |
| AGCCATGTAAATCATGTAAA+TGG | + | chr5.4:7460959-7460978 | MS.gene015363:intron | 30.0% | |
| AGTCAAACAGTATACAATAG+TGG | + | chr5.4:7459206-7459225 | MS.gene015363:intron | 30.0% | |
| CAAAAAGTTCAAACAACAGA+TGG | - | chr5.4:7459586-7459605 | None:intergenic | 30.0% | |
| CAAAGAAAGTGAGTATTACT+AGG | + | chr5.4:7462539-7462558 | MS.gene015363:intron | 30.0% | |
| CACAGAACAAAATTCAACAT+TGG | - | chr5.4:7461525-7461544 | None:intergenic | 30.0% | |
| CATGAATCAGGATACAATAT+GGG | + | chr5.4:7460990-7461009 | MS.gene015363:intron | 30.0% | |
| CCAAACAAAATGTATTACAG+TGG | + | chr5.4:7458149-7458168 | MS.gene015363:intron | 30.0% | |
| CTAATACCTAAAACAGACTT+AGG | + | chr5.4:7460403-7460422 | MS.gene015363:intron | 30.0% | |
| CTGCAATTTCAAATTAACAG+TGG | - | chr5.4:7462293-7462312 | None:intergenic | 30.0% | |
| CTGTGATTAAGACAAAATTG+GGG | + | chr5.4:7461540-7461559 | MS.gene015363:CDS | 30.0% | |
| GATACATACATTCCCAAAAA+AGG | + | chr5.4:7460254-7460273 | MS.gene015363:CDS | 30.0% | |
| GATGGAAAGGCTAAAATATT+AGG | - | chr5.4:7459568-7459587 | None:intergenic | 30.0% | |
| GGAGAAGATATTGACAATAT+AGG | + | chr5.4:7461215-7461234 | MS.gene015363:intron | 30.0% | |
| GTAAATCATGTAAATGGCAA+TGG | + | chr5.4:7460965-7460984 | MS.gene015363:intron | 30.0% | |
| TATAAAACAAAATTGCGGGA+GGG | + | chr5.4:7458283-7458302 | MS.gene015363:intron | 30.0% | |
| TATGGTAATAGGTTTCAGAA+TGG | + | chr5.4:7458712-7458731 | MS.gene015363:CDS | 30.0% | |
| TCATGAATCAGGATACAATA+TGG | + | chr5.4:7460989-7461008 | MS.gene015363:intron | 30.0% | |
| TGTGATTAAGACAAAATTGG+GGG | + | chr5.4:7461541-7461560 | MS.gene015363:CDS | 30.0% | |
| TTATAAAACAAAATTGCGGG+AGG | + | chr5.4:7458282-7458301 | MS.gene015363:intron | 30.0% | |
| TTGAATATCTTGTGCCATAA+TGG | + | chr5.4:7458172-7458191 | MS.gene015363:intron | 30.0% | |
| TTGATCGGTTATTACAACTT+TGG | + | chr5.4:7458408-7458427 | MS.gene015363:intron | 30.0% | |
| TTGGCAATTAGATGTTATCT+GGG | + | chr5.4:7461428-7461447 | MS.gene015363:intron | 30.0% | |
| TTGTTCGTATTATTACGGAT+GGG | - | chr5.4:7458580-7458599 | None:intergenic | 30.0% | |
| TTTGGCAATTAGATGTTATC+TGG | + | chr5.4:7461427-7461446 | MS.gene015363:intron | 30.0% | |
| ! | AAGGTAATTTAGGACCTTAT+AGG | + | chr5.4:7458212-7458231 | MS.gene015363:intron | 30.0% |
| ! | AGAGAAACTGCTAAAGTTTT+GGG | + | chr5.4:7461803-7461822 | MS.gene015363:CDS | 30.0% |
| ! | AGGATGTGTGATTTTGTAAA+TGG | + | chr5.4:7461255-7461274 | MS.gene015363:intron | 30.0% |
| ! | ATGGAATTTTTCCCACTTTA+TGG | + | chr5.4:7461360-7461379 | MS.gene015363:intron | 30.0% |
| ! | ATGTGTGATTTTGTAAATGG+AGG | + | chr5.4:7461258-7461277 | MS.gene015363:intron | 30.0% |
| ! | CCACTGTAATACATTTTGTT+TGG | - | chr5.4:7458152-7458171 | None:intergenic | 30.0% |
| ! | GGTACTTCATTTTATCTACA+AGG | + | chr5.4:7458193-7458212 | MS.gene015363:intron | 30.0% |
| ! | TAATTTGTCCAACAGTTAAG+TGG | - | chr5.4:7461340-7461359 | None:intergenic | 30.0% |
| ! | TATACTGCTTTAGCGTTTTA+GGG | + | chr5.4:7459795-7459814 | MS.gene015363:intron | 30.0% |
| ! | TCTTCAAAACATCCATTTTG+TGG | + | chr5.4:7460477-7460496 | MS.gene015363:CDS | 30.0% |
| ! | TGATGGAAAGAGATTTTATG+TGG | + | chr5.4:7461613-7461632 | MS.gene015363:CDS | 30.0% |
| ! | TGCCATTTACATGATTTACA+TGG | - | chr5.4:7460964-7460983 | None:intergenic | 30.0% |
| ! | TTTAACTTCTGTGAAGTGTA+TGG | + | chr5.4:7462240-7462259 | MS.gene015363:intron | 30.0% |
| ! | TTTGAAATGTGTTTGCTCTT+AGG | + | chr5.4:7460652-7460671 | MS.gene015363:intron | 30.0% |
| !! | AAAGGTTATTGCTTTTCAAG+AGG | + | chr5.4:7458798-7458817 | MS.gene015363:CDS | 30.0% |
| !! | AGAATTTTGGGTATGGTAAT+AGG | + | chr5.4:7458701-7458720 | MS.gene015363:CDS | 30.0% |
| !! | ATCAACATAATTTGTTGGCA+GGG | + | chr5.4:7462462-7462481 | MS.gene015363:intron | 30.0% |
| !! | GGTTATTACAACTTTGGAAT+AGG | + | chr5.4:7458414-7458433 | MS.gene015363:intron | 30.0% |
| !! | TATCAACATAATTTGTTGGC+AGG | + | chr5.4:7462461-7462480 | MS.gene015363:intron | 30.0% |
| !! | TATTGCTTTTCAAGAGGTAT+GGG | + | chr5.4:7458804-7458823 | MS.gene015363:intron | 30.0% |
| !! | TTATTGCTTTTCAAGAGGTA+TGG | + | chr5.4:7458803-7458822 | MS.gene015363:intron | 30.0% |
| !! | TTTTAGGTATTAGCAGCAAA+AGG | - | chr5.4:7460396-7460415 | None:intergenic | 30.0% |
| !!! | CAAAATGGATGTTTTGAAGA+TGG | - | chr5.4:7460477-7460496 | None:intergenic | 30.0% |
| AAAGTGAAATTGTTCGGTCT+CGG | - | chr5.4:7462610-7462629 | None:intergenic | 35.0% | |
| AAATCACTTTGTGGTCTTTC+TGG | - | chr5.4:7460890-7460909 | None:intergenic | 35.0% | |
| AGATGTAATAACAAGTCACC+TGG | + | chr5.4:7462732-7462751 | MS.gene015363:CDS | 35.0% | |
| AGTTCAAACAACAGATGGAA+AGG | - | chr5.4:7459581-7459600 | None:intergenic | 35.0% | |
| ATAGTCTCTTTACCTAGTCA+TGG | + | chr5.4:7461137-7461156 | MS.gene015363:intron | 35.0% | |
| ATTAACCGTAAAGGAAACAC+TGG | - | chr5.4:7458247-7458266 | None:intergenic | 35.0% | |
| CAGAACATATACATCTGGAA+GGG | - | chr5.4:7459968-7459987 | None:intergenic | 35.0% | |
| CTCCAATATCTTCAGTGATA+TGG | - | chr5.4:7460214-7460233 | None:intergenic | 35.0% | |
| GAATAAAAATGAAGGGCTAC+TGG | + | chr5.4:7462208-7462227 | MS.gene015363:CDS | 35.0% | |
| GAGGCAAAAGTGAAATTGTT+CGG | - | chr5.4:7462616-7462635 | None:intergenic | 35.0% | |
| GCAGTTGAATTATCATAACG+AGG | + | chr5.4:7461767-7461786 | MS.gene015363:intron | 35.0% | |
| GGAGTTAAAAACAAGTTACG+AGG | + | chr5.4:7461634-7461653 | MS.gene015363:CDS | 35.0% | |
| GGCGTTCCATATATTTGTAT+AGG | + | chr5.4:7461951-7461970 | MS.gene015363:CDS | 35.0% | |
| GGTTAACCAATTAACCGTAA+AGG | - | chr5.4:7458256-7458275 | None:intergenic | 35.0% | |
| GTATTAGCAGCAAAAGGAAA+AGG | - | chr5.4:7460390-7460409 | None:intergenic | 35.0% | |
| GTGTTTCCTTTACGGTTAAT+TGG | + | chr5.4:7458247-7458266 | MS.gene015363:intron | 35.0% | |
| GTTGATTACCTACCACAAAA+TGG | - | chr5.4:7460492-7460511 | None:intergenic | 35.0% | |
| GTTGTTCGTATTATTACGGA+TGG | - | chr5.4:7458581-7458600 | None:intergenic | 35.0% | |
| TACTTCTTCCACTTAACTGT+TGG | + | chr5.4:7461329-7461348 | MS.gene015363:intron | 35.0% | |
| TCAAAAGTCCAAACAACAGA+GGG | - | chr5.4:7459297-7459316 | None:intergenic | 35.0% | |
| TCAGAACATATACATCTGGA+AGG | - | chr5.4:7459969-7459988 | None:intergenic | 35.0% | |
| TCATGACATGCAAGTGAAAA+AGG | - | chr5.4:7461883-7461902 | None:intergenic | 35.0% | |
| TGAAGAAACTCTGTCAAGAA+AGG | + | chr5.4:7458780-7458799 | MS.gene015363:CDS | 35.0% | |
| TGAGTTTAGTAGTGTAGTGA+TGG | + | chr5.4:7460711-7460730 | MS.gene015363:intron | 35.0% | |
| TGCATGTCATGATTTCAACA+AGG | + | chr5.4:7461891-7461910 | MS.gene015363:intron | 35.0% | |
| TGCGTCATGCAATTTAAGTA+GGG | + | chr5.4:7458857-7458876 | MS.gene015363:intron | 35.0% | |
| TGGAAAGCCAAAAAAACAGA+TGG | - | chr5.4:7462567-7462586 | None:intergenic | 35.0% | |
| TGGAAATAGGAAACCAATAC+AGG | - | chr5.4:7462273-7462292 | None:intergenic | 35.0% | |
| TTACCTTGTTCAGATTGTTG+CGG | - | chr5.4:7460622-7460641 | None:intergenic | 35.0% | |
| TTGCGTCATGCAATTTAAGT+AGG | + | chr5.4:7458856-7458875 | MS.gene015363:intron | 35.0% | |
| TTGGCATCAACATCATGTAT+CGG | - | chr5.4:7461506-7461525 | None:intergenic | 35.0% | |
| TTGGTATCAAGCTGATTGTA+GGG | + | chr5.4:7461097-7461116 | MS.gene015363:intron | 35.0% | |
| TTTGGTATCAAGCTGATTGT+AGG | + | chr5.4:7461096-7461115 | MS.gene015363:intron | 35.0% | |
| ! | AGGAGCTTATGGTAATGAAA+AGG | - | chr5.4:7461863-7461882 | None:intergenic | 35.0% |
| ! | CAAAACATCCATTTTGTGGT+AGG | + | chr5.4:7460481-7460500 | MS.gene015363:intron | 35.0% |
| ! | CTATACTGCTTTAGCGTTTT+AGG | + | chr5.4:7459794-7459813 | MS.gene015363:intron | 35.0% |
| ! | GAGAGAAACTGCTAAAGTTT+TGG | + | chr5.4:7461802-7461821 | MS.gene015363:CDS | 35.0% |
| ! | GATGCTATTTGTCTACTGTT+TGG | - | chr5.4:7459501-7459520 | None:intergenic | 35.0% |
| ! | TAGGACACTATCGAGATTTT+AGG | - | chr5.4:7459549-7459568 | None:intergenic | 35.0% |
| !! | ACACTATCGAGATTTTAGGA+TGG | - | chr5.4:7459545-7459564 | None:intergenic | 35.0% |
| !! | AGGTGACTTGTTATTACATC+TGG | - | chr5.4:7462733-7462752 | None:intergenic | 35.0% |
| !! | TTTTACGCAGATACTTGCTA+CGG | + | chr5.4:7460787-7460806 | MS.gene015363:intron | 35.0% |
| !!! | GTATTTTGATGATCGTAGCT+TGG | + | chr5.4:7460059-7460078 | MS.gene015363:CDS | 35.0% |
| AAAACAGACTTAGGCTCAGA+AGG | + | chr5.4:7460412-7460431 | MS.gene015363:intron | 40.0% | |
| AAACTGGCGAGGAAATCAAA+AGG | + | chr5.4:7459014-7459033 | MS.gene015363:intron | 40.0% | |
| AAAGTGATTTAGATCGCAGG+AGG | + | chr5.4:7460900-7460919 | MS.gene015363:CDS | 40.0% | |
| AAATTGCAGTAATCACCCAG+CGG | + | chr5.4:7462304-7462323 | MS.gene015363:intron | 40.0% | |
| AACTTCTGTGAAGTGTATGG+TGG | + | chr5.4:7462243-7462262 | MS.gene015363:intron | 40.0% | |
| ACAACAACAGGTAGCTGTTA+GGG | + | chr5.4:7461047-7461066 | MS.gene015363:intron | 40.0% | |
| ACAGCTACCTGTTGTTGTAT+TGG | - | chr5.4:7461045-7461064 | None:intergenic | 40.0% | |
| ACGGTTAATTGGTTAACCGT+GGG | + | chr5.4:7458258-7458277 | MS.gene015363:intron | 40.0% | |
| AGAAGTTCCAAACGGTTGAA+AGG | - | chr5.4:7462694-7462713 | None:intergenic | 40.0% | |
| ATCTGTTTCAGCTTAGTCTC+TGG | + | chr5.4:7462052-7462071 | MS.gene015363:intron | 40.0% | |
| ATGGCAATGGATCATGAATC+AGG | + | chr5.4:7460978-7460997 | MS.gene015363:intron | 40.0% | |
| CACAAAGTGATTTAGATCGC+AGG | + | chr5.4:7460897-7460916 | MS.gene015363:CDS | 40.0% | |
| CAGTATAGCGAATAGTCGTA+TGG | - | chr5.4:7459782-7459801 | None:intergenic | 40.0% | |
| CCGGGTTGTTCGTATTATTA+CGG | - | chr5.4:7458585-7458604 | None:intergenic | 40.0% | |
| CCGTAATAATACGAACAACC+CGG | + | chr5.4:7458582-7458601 | MS.gene015363:CDS | 40.0% | |
| CGCCATATCACTGAAGATAT+TGG | + | chr5.4:7460209-7460228 | MS.gene015363:CDS | 40.0% | |
| CGTAATAATACGAACAACCC+GGG | + | chr5.4:7458583-7458602 | MS.gene015363:CDS | 40.0% | |
| CGTCATGCAATTTAAGTAGG+GGG | + | chr5.4:7458859-7458878 | MS.gene015363:intron | 40.0% | |
| CTGCGATCTAAATCACTTTG+TGG | - | chr5.4:7460899-7460918 | None:intergenic | 40.0% | |
| GAATCTGCAAGCAAGAATAG+AGG | - | chr5.4:7461917-7461936 | None:intergenic | 40.0% | |
| GCAAGTGAAAAAGGAGCTTA+TGG | - | chr5.4:7461874-7461893 | None:intergenic | 40.0% | |
| GCGTCATGCAATTTAAGTAG+GGG | + | chr5.4:7458858-7458877 | MS.gene015363:intron | 40.0% | |
| GTCAAAAGTCCAAACAACAG+AGG | - | chr5.4:7459298-7459317 | None:intergenic | 40.0% | |
| TACAACAACAGGTAGCTGTT+AGG | + | chr5.4:7461046-7461065 | MS.gene015363:intron | 40.0% | |
| TACGGTTAATTGGTTAACCG+TGG | + | chr5.4:7458257-7458276 | MS.gene015363:intron | 40.0% | |
| TACTCAAACACGCAAAGAAG+CGG | - | chr5.4:7459465-7459484 | None:intergenic | 40.0% | |
| TAGGATGGCTTCGTTTATTG+CGG | - | chr5.4:7459530-7459549 | None:intergenic | 40.0% | |
| TAGTCTATCCCTCTGTTGTT+TGG | + | chr5.4:7459286-7459305 | MS.gene015363:intron | 40.0% | |
| TCACTAATCGACAAACACCA+AGG | - | chr5.4:7458453-7458472 | None:intergenic | 40.0% | |
| TCATTATGTTGAAACTGGCG+AGG | + | chr5.4:7459003-7459022 | MS.gene015363:intron | 40.0% | |
| TCTCTTTACCTAGTCATGGT+TGG | + | chr5.4:7461141-7461160 | MS.gene015363:intron | 40.0% | |
| TTATATTCGCCATGAGCCTT+GGG | + | chr5.4:7460811-7460830 | MS.gene015363:CDS | 40.0% | |
| TTCGTATTATTACGGATGGG+AGG | - | chr5.4:7458577-7458596 | None:intergenic | 40.0% | |
| TTGTAGTCAATAGCAGCCAT+AGG | + | chr5.4:7459101-7459120 | MS.gene015363:intron | 40.0% | |
| ! | AAATTCTGCCTCTGAGGATA+AGG | - | chr5.4:7458688-7458707 | None:intergenic | 40.0% |
| ! | ATCCTCAGAGGCAGAATTTT+GGG | + | chr5.4:7458689-7458708 | MS.gene015363:CDS | 40.0% |
| ! | ATGGGAGTACACAAAAGGAA+TGG | + | chr5.4:7460836-7460855 | MS.gene015363:CDS | 40.0% |
| ! | TATCCTCAGAGGCAGAATTT+TGG | + | chr5.4:7458688-7458707 | MS.gene015363:CDS | 40.0% |
| ! | TCTGAGCCTAAGTCTGTTTT+AGG | - | chr5.4:7460412-7460431 | None:intergenic | 40.0% |
| ! | TGGCAAGATGTGATTTTCTC+TGG | + | chr5.4:7458543-7458562 | MS.gene015363:intron | 40.0% |
| !! | AACATAATTTGTTGGCAGGG+TGG | + | chr5.4:7462465-7462484 | MS.gene015363:intron | 40.0% |
| !! | ATTGGAGCTGATTTGAACGA+AGG | + | chr5.4:7460227-7460246 | MS.gene015363:CDS | 40.0% |
| !! | GAGGTATTATGCTGGCTTTA+TGG | + | chr5.4:7462510-7462529 | MS.gene015363:CDS | 40.0% |
| !!! | CTAGGCACCATCTGTTTTTT+TGG | + | chr5.4:7462557-7462576 | MS.gene015363:intron | 40.0% |
| AAAAATGAAGGGCTACTGGC+AGG | + | chr5.4:7462212-7462231 | MS.gene015363:CDS | 45.0% | |
| AAAACAAAATTGCGGGAGGG+TGG | + | chr5.4:7458286-7458305 | MS.gene015363:intron | 45.0% | |
| AAATATATGGAACGCCTGCC+AGG | - | chr5.4:7461947-7461966 | None:intergenic | 45.0% | |
| AGCAGCTATAGCAATGCCTA+TGG | - | chr5.4:7459120-7459139 | None:intergenic | 45.0% | |
| AGTTCCAAACGGTTGAAAGG+TGG | - | chr5.4:7462691-7462710 | None:intergenic | 45.0% | |
| ATGGCCACTCCATCAAAGTA+TGG | - | chr5.4:7459763-7459782 | None:intergenic | 45.0% | |
| CAACAACAGGTAGCTGTTAG+GGG | + | chr5.4:7461048-7461067 | MS.gene015363:intron | 45.0% | |
| CAAGGGCAGCATAATGATAG+AGG | + | chr5.4:7458637-7458656 | MS.gene015363:CDS | 45.0% | |
| CACTCCATCAAAGTATGGGA+AGG | - | chr5.4:7459758-7459777 | None:intergenic | 45.0% | |
| CAGAGACAAAACGTTCATCG+CGG | - | chr5.4:7458741-7458760 | None:intergenic | 45.0% | |
| CAGCACAAGATCACAGATTG+CGG | - | chr5.4:7462000-7462019 | None:intergenic | 45.0% | |
| CAGCATAATGATAGAGGAGC+TGG | + | chr5.4:7458643-7458662 | MS.gene015363:CDS | 45.0% | |
| CTATAGCAGGCAAGTTCACA+AGG | - | chr5.4:7460018-7460037 | None:intergenic | 45.0% | |
| CTTATATTCGCCATGAGCCT+TGG | + | chr5.4:7460810-7460829 | MS.gene015363:CDS | 45.0% | |
| CTTCCCATACTTTGATGGAG+TGG | + | chr5.4:7459756-7459775 | MS.gene015363:intron | 45.0% | |
| CTTGCAGATTCAGTCATTCC+TGG | + | chr5.4:7461926-7461945 | MS.gene015363:intron | 45.0% | |
| GACACTATCCAACCATGACT+AGG | - | chr5.4:7461152-7461171 | None:intergenic | 45.0% | |
| GACTTAGGCTCAGAAGGTTA+TGG | + | chr5.4:7460418-7460437 | MS.gene015363:intron | 45.0% | |
| GAGCTTGCAGAAGTTCCAAA+CGG | - | chr5.4:7462702-7462721 | None:intergenic | 45.0% | |
| GCATTTCAGTCCGAACAAGA+CGG | - | chr5.4:7462164-7462183 | None:intergenic | 45.0% | |
| GTACCGCAACAATCTGAACA+AGG | + | chr5.4:7460616-7460635 | MS.gene015363:CDS | 45.0% | |
| GTATGGTGGCAAACCTGTAT+TGG | + | chr5.4:7462257-7462276 | MS.gene015363:intron | 45.0% | |
| TAATCGACAAACACCAAGGC+AGG | - | chr5.4:7458449-7458468 | None:intergenic | 45.0% | |
| TACCCAAAATTCTGCCTCTG+AGG | - | chr5.4:7458694-7458713 | None:intergenic | 45.0% | |
| TAGCTTGGTAAGCGCTAGTT+GGG | + | chr5.4:7460074-7460093 | MS.gene015363:intron | 45.0% | |
| TCATCCTATGCAGTCAATGG+TGG | - | chr5.4:7459842-7459861 | None:intergenic | 45.0% | |
| TCTCAGCACCCATCAAGATA+CGG | - | chr5.4:7461571-7461590 | None:intergenic | 45.0% | |
| TGCTGTGATACGACTACTGA+TGG | + | chr5.4:7461596-7461615 | MS.gene015363:CDS | 45.0% | |
| TGGCCACTCCATCAAAGTAT+GGG | - | chr5.4:7459762-7459781 | None:intergenic | 45.0% | |
| TTGTGTACTCCCATTTCCCA+AGG | - | chr5.4:7460830-7460849 | None:intergenic | 45.0% | |
| ! | CCATTGACTGCATAGGATGA+CGG | + | chr5.4:7459842-7459861 | MS.gene015363:intron | 45.0% |
| ! | CTATCCACCATTGACTGCAT+AGG | + | chr5.4:7459835-7459854 | MS.gene015363:intron | 45.0% |
| ! | GGGAAATGGGAGTACACAAA+AGG | + | chr5.4:7460831-7460850 | MS.gene015363:CDS | 45.0% |
| ! | TTGGCCTTCCCATACTTTGA+TGG | + | chr5.4:7459751-7459770 | MS.gene015363:intron | 45.0% |
| !! | CAGAGGCAGAATTTTGGGTA+TGG | + | chr5.4:7458694-7458713 | MS.gene015363:CDS | 45.0% |
| !! | CCTAGGGTGCTCTTTTTGAT+CGG | + | chr5.4:7458393-7458412 | MS.gene015363:intron | 45.0% |
| !! | TATCTTGATGGGTGCTGAGA+TGG | + | chr5.4:7461571-7461590 | MS.gene015363:CDS | 45.0% |
| !! | AAATTGTTAAATAAAAATAT+AGG | - | chr5.4:7461836-7461855 | None:intergenic | 5.0% |
| AATACGAACAACCCGGGAAG+AGG | + | chr5.4:7458589-7458608 | MS.gene015363:CDS | 50.0% | |
| ACGTGTTAATGCAGATCCGC+TGG | - | chr5.4:7462323-7462342 | None:intergenic | 50.0% | |
| AGACAAAACGTTCATCGCGG+TGG | - | chr5.4:7458738-7458757 | None:intergenic | 50.0% | |
| AGCCACTATAGCGACACCTA+TGG | - | chr5.4:7459409-7459428 | None:intergenic | 50.0% | |
| ATACGAACAACCCGGGAAGA+GGG | + | chr5.4:7458590-7458609 | MS.gene015363:CDS | 50.0% | |
| CAACGGTCGAGAGATTCCTA+GGG | + | chr5.4:7458377-7458396 | MS.gene015363:intron | 50.0% | |
| CAGATTCAGTCATTCCTGGC+AGG | + | chr5.4:7461930-7461949 | MS.gene015363:intron | 50.0% | |
| CCGTCATCCTATGCAGTCAA+TGG | - | chr5.4:7459845-7459864 | None:intergenic | 50.0% | |
| CGTGTTAATGCAGATCCGCT+GGG | - | chr5.4:7462322-7462341 | None:intergenic | 50.0% | |
| CTGTCATACAGGGATGATGC+AGG | + | chr5.4:7462138-7462157 | MS.gene015363:intron | 50.0% | |
| GAAGATCCCAGAAGAGCAGA+CGG | + | chr5.4:7461476-7461495 | MS.gene015363:CDS | 50.0% | |
| GTAGCTTGGTAAGCGCTAGT+TGG | + | chr5.4:7460073-7460092 | MS.gene015363:intron | 50.0% | |
| TCAACGGTCGAGAGATTCCT+AGG | + | chr5.4:7458376-7458395 | MS.gene015363:intron | 50.0% | |
| TGCTATAGTCGTGCAGAAGG+CGG | + | chr5.4:7460030-7460049 | MS.gene015363:CDS | 50.0% | |
| ! | ATGATGCAGGCCGTCTTGTT+CGG | + | chr5.4:7462151-7462170 | MS.gene015363:CDS | 50.0% |
| ! | TGGTGGATAGCAGAGCAAAG+TGG | - | chr5.4:7459825-7459844 | None:intergenic | 50.0% |
| ! | TTGCGGACGAGGTATTATGC+TGG | + | chr5.4:7462502-7462521 | MS.gene015363:CDS | 50.0% |
| !! | AGCCATAGGTGTCGCTATAG+TGG | + | chr5.4:7459404-7459423 | MS.gene015363:intron | 50.0% |
| !! | CCGATCAAAAAGAGCACCCT+AGG | - | chr5.4:7458396-7458415 | None:intergenic | 50.0% |
| !! | TGCTCTTCTGGGATCTTCAG+TGG | - | chr5.4:7461474-7461493 | None:intergenic | 50.0% |
| !! | TTCTGGGATCTTCAGTGGCA+AGG | - | chr5.4:7461469-7461488 | None:intergenic | 50.0% |
| CGCCATGAGCCTTGGGAAAT+GGG | + | chr5.4:7460818-7460837 | MS.gene015363:CDS | 55.0% | |
| CTATAGTCGTGCAGAAGGCG+GGG | + | chr5.4:7460032-7460051 | MS.gene015363:CDS | 55.0% | |
| CTCCCATTTCCCAAGGCTCA+TGG | - | chr5.4:7460823-7460842 | None:intergenic | 55.0% | |
| GACGTGGTCGTTGGCAACAA+GGG | + | chr5.4:7458620-7458639 | MS.gene015363:CDS | 55.0% | |
| GCCTGCTATAGTCGTGCAGA+AGG | + | chr5.4:7460027-7460046 | MS.gene015363:CDS | 55.0% | |
| GCCTTCTGCACGACTATAGC+AGG | - | chr5.4:7460031-7460050 | None:intergenic | 55.0% | |
| GCTATAGTCGTGCAGAAGGC+GGG | + | chr5.4:7460031-7460050 | MS.gene015363:CDS | 55.0% | |
| GGGGCTCACCGTATCTTGAT+GGG | + | chr5.4:7461560-7461579 | MS.gene015363:CDS | 55.0% | |
| GTCACCTGGAGCTGTTGTGA+TGG | + | chr5.4:7462746-7462765 | MS.gene015363:CDS | 55.0% | |
| GTCCTGGACCTTATCCTCAG+AGG | + | chr5.4:7458677-7458696 | MS.gene015363:CDS | 55.0% | |
| GTGTTTCATGTAGCGCCTGG+AGG | - | chr5.4:7459443-7459462 | None:intergenic | 55.0% | |
| TACGAACAACCCGGGAAGAG+GGG | + | chr5.4:7458591-7458610 | MS.gene015363:CDS | 55.0% | |
| TCGCCATGAGCCTTGGGAAA+TGG | + | chr5.4:7460817-7460836 | MS.gene015363:CDS | 55.0% | |
| TGAGGATAAGGTCCAGGACG+CGG | - | chr5.4:7458676-7458695 | None:intergenic | 55.0% | |
| ! | GAGTATCGTGTAGCGCCTAG+AGG | - | chr5.4:7459154-7459173 | None:intergenic | 55.0% |
| ! | GCTATAGCTGCTTTGCGCTG+TGG | + | chr5.4:7459128-7459147 | MS.gene015363:intron | 55.0% |
| ! | TGCCTCTGAGGATAAGGTCC+AGG | - | chr5.4:7458682-7458701 | None:intergenic | 55.0% |
| ACGAACAACCCGGGAAGAGG+GGG | + | chr5.4:7458592-7458611 | MS.gene015363:CDS | 60.0% | |
| ATACCTCGTCCGCAAACGCC+AGG | - | chr5.4:7462497-7462516 | None:intergenic | 60.0% | |
| CGCGCCACCTTTCAACCGTT+TGG | + | chr5.4:7462684-7462703 | MS.gene015363:CDS | 60.0% | |
| GCGGTGTTTCATGTAGCGCC+TGG | - | chr5.4:7459446-7459465 | None:intergenic | 60.0% | |
| GGACGTGGTCGTTGGCAACA+AGG | + | chr5.4:7458619-7458638 | MS.gene015363:CDS | 60.0% | |
| GGCTCTCCGTCTGCTCTTCT+GGG | - | chr5.4:7461485-7461504 | None:intergenic | 60.0% | |
| GGGGGCTCACCGTATCTTGA+TGG | + | chr5.4:7461559-7461578 | MS.gene015363:CDS | 60.0% | |
| TAGGCGCTTGTGTCCTGCCT+TGG | + | chr5.4:7458433-7458452 | MS.gene015363:intron | 60.0% | |
| TGCTTTGCGCTGTGGCCTCT+AGG | + | chr5.4:7459136-7459155 | MS.gene015363:intron | 60.0% | |
| TGGAGTGTGCCTGGCGTTTG+CGG | + | chr5.4:7462485-7462504 | MS.gene015363:CDS | 60.0% | |
| AACAACCCGGGAAGAGGGGG+TGG | + | chr5.4:7458595-7458614 | MS.gene015363:CDS | 65.0% | |
| CGGCTCTCCGTCTGCTCTTC+TGG | - | chr5.4:7461486-7461505 | None:intergenic | 65.0% | |
| GCTGGCATTCTTCCGCGTCC+TGG | + | chr5.4:7458661-7458680 | MS.gene015363:CDS | 65.0% | |
| GGCTTTGCGCTGTAGCCTCC+AGG | + | chr5.4:7459425-7459444 | MS.gene015363:intron | 65.0% | |
| TTGGCAGGGTGGAGTGTGCC+TGG | + | chr5.4:7462476-7462495 | MS.gene015363:intron | 65.0% | |
| AACCCGGGAAGAGGGGGTGG+TGG | + | chr5.4:7458598-7458617 | MS.gene015363:CDS | 70.0% | |
| CGTCCACCACCCCCTCTTCC+CGG | - | chr5.4:7458604-7458623 | None:intergenic | 70.0% | |
| GTCCACCACCCCCTCTTCCC+GGG | - | chr5.4:7458603-7458622 | None:intergenic | 70.0% | |
| GTGCCTGGCGTTTGCGGACG+AGG | + | chr5.4:7462491-7462510 | MS.gene015363:CDS | 70.0% | |
| !! | GGAAGAGGGGGTGGTGGACG+TGG | + | chr5.4:7458604-7458623 | MS.gene015363:CDS | 70.0% |
| !! | GGGGTGGTGGACGTGGTCGT+TGG | + | chr5.4:7458611-7458630 | MS.gene015363:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 7458135 | 7462765 | 7458135 | ID=MS.gene015363 |
| chr5.4 | mRNA | 7458135 | 7462765 | 7458135 | ID=MS.gene015363.t1;Parent=MS.gene015363 |
| chr5.4 | exon | 7458135 | 7458141 | 7458135 | ID=MS.gene015363.t1.exon1;Parent=MS.gene015363.t1 |
| chr5.4 | CDS | 7458135 | 7458141 | 7458135 | ID=cds.MS.gene015363.t1;Parent=MS.gene015363.t1 |
| chr5.4 | exon | 7458569 | 7458819 | 7458569 | ID=MS.gene015363.t1.exon2;Parent=MS.gene015363.t1 |
| chr5.4 | CDS | 7458569 | 7458819 | 7458569 | ID=cds.MS.gene015363.t1;Parent=MS.gene015363.t1 |
| chr5.4 | exon | 7460015 | 7460080 | 7460015 | ID=MS.gene015363.t1.exon3;Parent=MS.gene015363.t1 |
| chr5.4 | CDS | 7460015 | 7460080 | 7460015 | ID=cds.MS.gene015363.t1;Parent=MS.gene015363.t1 |
| chr5.4 | exon | 7460197 | 7460275 | 7460197 | ID=MS.gene015363.t1.exon4;Parent=MS.gene015363.t1 |
| chr5.4 | CDS | 7460197 | 7460275 | 7460197 | ID=cds.MS.gene015363.t1;Parent=MS.gene015363.t1 |
| chr5.4 | exon | 7460419 | 7460498 | 7460419 | ID=MS.gene015363.t1.exon5;Parent=MS.gene015363.t1 |
| chr5.4 | CDS | 7460419 | 7460498 | 7460419 | ID=cds.MS.gene015363.t1;Parent=MS.gene015363.t1 |
| chr5.4 | exon | 7460614 | 7460637 | 7460614 | ID=MS.gene015363.t1.exon6;Parent=MS.gene015363.t1 |
| chr5.4 | CDS | 7460614 | 7460637 | 7460614 | ID=cds.MS.gene015363.t1;Parent=MS.gene015363.t1 |
| chr5.4 | exon | 7460797 | 7460921 | 7460797 | ID=MS.gene015363.t1.exon7;Parent=MS.gene015363.t1 |
| chr5.4 | CDS | 7460797 | 7460921 | 7460797 | ID=cds.MS.gene015363.t1;Parent=MS.gene015363.t1 |
| chr5.4 | exon | 7461439 | 7461655 | 7461439 | ID=MS.gene015363.t1.exon8;Parent=MS.gene015363.t1 |
| chr5.4 | CDS | 7461439 | 7461655 | 7461439 | ID=cds.MS.gene015363.t1;Parent=MS.gene015363.t1 |
| chr5.4 | exon | 7461771 | 7461824 | 7461771 | ID=MS.gene015363.t1.exon9;Parent=MS.gene015363.t1 |
| chr5.4 | CDS | 7461771 | 7461824 | 7461771 | ID=cds.MS.gene015363.t1;Parent=MS.gene015363.t1 |
| chr5.4 | exon | 7461933 | 7461979 | 7461933 | ID=MS.gene015363.t1.exon10;Parent=MS.gene015363.t1 |
| chr5.4 | CDS | 7461933 | 7461979 | 7461933 | ID=cds.MS.gene015363.t1;Parent=MS.gene015363.t1 |
| chr5.4 | exon | 7462149 | 7462233 | 7462149 | ID=MS.gene015363.t1.exon11;Parent=MS.gene015363.t1 |
| chr5.4 | CDS | 7462149 | 7462233 | 7462149 | ID=cds.MS.gene015363.t1;Parent=MS.gene015363.t1 |
| chr5.4 | exon | 7462483 | 7462546 | 7462483 | ID=MS.gene015363.t1.exon12;Parent=MS.gene015363.t1 |
| chr5.4 | CDS | 7462483 | 7462546 | 7462483 | ID=cds.MS.gene015363.t1;Parent=MS.gene015363.t1 |
| chr5.4 | exon | 7462662 | 7462765 | 7462662 | ID=MS.gene015363.t1.exon13;Parent=MS.gene015363.t1 |
| chr5.4 | CDS | 7462662 | 7462765 | 7462662 | ID=cds.MS.gene015363.t1;Parent=MS.gene015363.t1 |
| Gene Sequence |
| Protein sequence |
