Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015761.t1 | XP_003630778.3 | 94.4 | 521 | 29 | 0 | 1 | 521 | 1 | 521 | 2.30E-280 | 974.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015761.t1 | Q9SZD1 | 58.7 | 487 | 159 | 7 | 35 | 505 | 103 | 563 | 1.4e-145 | 518.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015761.t1 | A0A396GR76 | 94.4 | 521 | 29 | 0 | 1 | 521 | 1 | 521 | 1.6e-280 | 974.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene015761.t1 | TF | CPP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene015761 | MS.gene61350 | PPI |
| MS.gene015761 | MS.gene04747 | PPI |
| MS.gene015761 | MS.gene042998 | PPI |
| MS.gene015761 | MS.gene69135 | PPI |
| MS.gene015761 | MS.gene05904 | PPI |
| MS.gene015761 | MS.gene69136 | PPI |
| MS.gene015761 | MS.gene059637 | PPI |
| MS.gene015761 | MS.gene049110 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015761.t1 | MTR_8g103320 | 97.689 | 476 | 11 | 0 | 1 | 476 | 1 | 476 | 0.0 | 967 |
| MS.gene015761.t1 | MTR_6g087590 | 65.025 | 609 | 150 | 11 | 1 | 560 | 1 | 595 | 0.0 | 736 |
| MS.gene015761.t1 | MTR_3g110122 | 42.387 | 486 | 247 | 13 | 36 | 512 | 101 | 562 | 1.81e-108 | 339 |
| MS.gene015761.t1 | MTR_5g006530 | 41.447 | 152 | 83 | 2 | 61 | 211 | 247 | 393 | 4.36e-29 | 122 |
| MS.gene015761.t1 | MTR_1g012020 | 40.462 | 173 | 95 | 5 | 50 | 218 | 469 | 637 | 4.97e-29 | 123 |
| MS.gene015761.t1 | MTR_5g006530 | 41.447 | 152 | 83 | 2 | 61 | 211 | 471 | 617 | 6.63e-29 | 122 |
| MS.gene015761.t1 | MTR_1g103230 | 33.898 | 118 | 77 | 1 | 95 | 211 | 450 | 567 | 3.16e-14 | 76.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015761.t1 | AT4G29000 | 65.207 | 434 | 138 | 7 | 61 | 489 | 109 | 534 | 0.0 | 554 |
| MS.gene015761.t1 | AT2G20110 | 49.913 | 577 | 198 | 16 | 1 | 528 | 1 | 535 | 1.71e-174 | 508 |
| MS.gene015761.t1 | AT2G20110 | 50.714 | 560 | 182 | 15 | 1 | 508 | 1 | 518 | 3.54e-174 | 506 |
| MS.gene015761.t1 | AT2G20110 | 49.315 | 584 | 198 | 17 | 1 | 528 | 1 | 542 | 2.16e-171 | 500 |
| MS.gene015761.t1 | AT5G25790 | 42.377 | 446 | 194 | 12 | 47 | 476 | 50 | 448 | 1.95e-103 | 322 |
| MS.gene015761.t1 | AT5G25790 | 42.534 | 442 | 199 | 11 | 47 | 476 | 50 | 448 | 3.76e-103 | 322 |
| MS.gene015761.t1 | AT5G25790 | 42.152 | 446 | 191 | 13 | 47 | 476 | 50 | 444 | 4.46e-101 | 315 |
| MS.gene015761.t1 | AT3G16160 | 31.291 | 457 | 193 | 14 | 24 | 470 | 17 | 362 | 2.13e-41 | 154 |
| MS.gene015761.t1 | AT3G22760 | 44.172 | 163 | 82 | 5 | 61 | 219 | 184 | 341 | 2.96e-34 | 137 |
| MS.gene015761.t1 | AT3G22760 | 44.172 | 163 | 82 | 5 | 61 | 219 | 307 | 464 | 7.33e-34 | 137 |
| MS.gene015761.t1 | AT4G14770 | 44.776 | 134 | 67 | 3 | 83 | 212 | 375 | 505 | 7.49e-32 | 131 |
| MS.gene015761.t1 | AT4G14770 | 44.776 | 134 | 67 | 3 | 83 | 212 | 356 | 486 | 7.64e-32 | 131 |
| MS.gene015761.t1 | AT4G14770 | 44.776 | 134 | 67 | 3 | 83 | 212 | 355 | 485 | 9.04e-32 | 131 |
| MS.gene015761.t1 | AT3G22780 | 44.030 | 134 | 68 | 3 | 83 | 212 | 401 | 531 | 6.64e-31 | 129 |
| MS.gene015761.t1 | AT3G04850 | 45.736 | 129 | 69 | 1 | 83 | 210 | 453 | 581 | 3.33e-30 | 126 |
Find 162 sgRNAs with CRISPR-Local
Find 402 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAGTCTTGTTTCAGAAAA+TGG | 0.136929 | 4.3:-2240199 | MS.gene015761:CDS |
| GACTTTGATTTAGGAGATTC+TGG | 0.202009 | 4.3:+2245450 | None:intergenic |
| TTGGGTCTTGACTTTGATTT+AGG | 0.219084 | 4.3:+2245441 | None:intergenic |
| TCTTAATAGGGTTATCACTA+TGG | 0.229357 | 4.3:-2241127 | MS.gene015761:CDS |
| GGAGACATTGGCCTCCCTTT+TGG | 0.278244 | 4.3:+2241324 | None:intergenic |
| TCTCCCCATCAGCTTCCTTT+TGG | 0.283654 | 4.3:+2241430 | None:intergenic |
| TTGAGTCTCTAACTCACTTC+TGG | 0.285807 | 4.3:+2240585 | None:intergenic |
| GGAAGTGTCGGCGGTGGTTG+TGG | 0.289843 | 4.3:+2245893 | None:intergenic |
| CAGCTCGATTTCAACGCTTT+TGG | 0.295923 | 4.3:-2245950 | MS.gene015761:CDS |
| TGCTTTGCCGACGTTATTAC+AGG | 0.297076 | 4.3:+2240492 | None:intergenic |
| ACATCTTCACAATTGCCTTA+TGG | 0.308433 | 4.3:-2241213 | MS.gene015761:CDS |
| GCAGCCAATGCTGCTATAAC+TGG | 0.312657 | 4.3:-2243793 | MS.gene015761:CDS |
| ATCACTATGGGCGAAATAAA+TGG | 0.314147 | 4.3:-2241114 | MS.gene015761:intron |
| GAAGTGTCGGCGGTGGTTGT+GGG | 0.336832 | 4.3:+2245894 | None:intergenic |
| CGGAACTCTGGCCGTCCATC+AGG | 0.341120 | 4.3:-2243714 | MS.gene015761:CDS |
| TATATCTATTGTTCGACCTT+CGG | 0.358406 | 4.3:+2240166 | None:intergenic |
| GCAGTCTTGTTTCAGAAAAT+GGG | 0.359660 | 4.3:-2240198 | MS.gene015761:CDS |
| GGCGGTGGTTGTGGGTGTTC+CGG | 0.362076 | 4.3:+2245902 | None:intergenic |
| TGCCATCACTTCAACGCCTT+TGG | 0.368657 | 4.3:-2240263 | MS.gene015761:CDS |
| TGCCATCACTTCAACGCCTT+TGG | 0.368657 | 4.3:-2240296 | MS.gene015761:CDS |
| CGTGTTGGACCTTCAACATT+AGG | 0.374824 | 4.3:-2242689 | MS.gene015761:CDS |
| GCTGCTATAACTGGAGCTAT+TGG | 0.378616 | 4.3:-2243784 | MS.gene015761:CDS |
| CACCATCACTTCAACACCTT+TGG | 0.384125 | 4.3:-2240329 | MS.gene015761:CDS |
| CACCATCACTTCAACACCTT+TGG | 0.384125 | 4.3:-2240395 | MS.gene015761:CDS |
| TCCGGCAGAGGTGCAGTTAC+CGG | 0.392618 | 4.3:+2245920 | None:intergenic |
| AAACAGAGCAAAGCTCCTTC+AGG | 0.392877 | 4.3:+2242525 | None:intergenic |
| TCTTTCGTTCCTTGTCCATA+AGG | 0.397871 | 4.3:+2241198 | None:intergenic |
| TTTCAGTGCGATTGATGATT+GGG | 0.398288 | 4.3:+2240557 | None:intergenic |
| TGGAGATCAAAACAACAATA+TGG | 0.398327 | 4.3:-2243830 | MS.gene015761:CDS |
| CACATCAATGCTAAAGTTCC+AGG | 0.399973 | 4.3:+2241303 | None:intergenic |
| CTGCCTAGCAAGCTTCTTAA+CGG | 0.406846 | 4.3:+2245970 | None:intergenic |
| GAAGGTCCAACACGAGGTAC+TGG | 0.411988 | 4.3:+2242698 | None:intergenic |
| AACGCAATCCAAATGCCTTT+AGG | 0.412558 | 4.3:-2245133 | MS.gene015761:CDS |
| ACTGGAGCTATTGGTTCCTC+TGG | 0.415396 | 4.3:-2243775 | MS.gene015761:CDS |
| CACCATCACTTCAGCACCTA+TGG | 0.418273 | 4.3:-2240461 | MS.gene015761:CDS |
| TCCATCAGGGATCCATCGTT+TGG | 0.418364 | 4.3:-2243700 | MS.gene015761:CDS |
| CCTCTTCCTGCACCCAAAGT+GGG | 0.422177 | 4.3:-2245869 | MS.gene015761:CDS |
| AAAGAAAAGGTTCGGAACTC+TGG | 0.425606 | 4.3:-2243726 | MS.gene015761:CDS |
| CGTCACTTCAACAACACCTT+TGG | 0.427483 | 4.3:-2240227 | MS.gene015761:CDS |
| TTTGAAGGGCCTAATGTTGA+AGG | 0.430598 | 4.3:+2242680 | None:intergenic |
| GCCCTTCAAAATTTATGTAC+AGG | 0.435578 | 4.3:-2242667 | MS.gene015761:intron |
| CTTAATAGGGTTATCACTAT+GGG | 0.444084 | 4.3:-2241126 | MS.gene015761:CDS |
| CAGAACAAAGAATGTTGGCT+TGG | 0.445420 | 4.3:+2243917 | None:intergenic |
| CCTAAGACTGACCCCACTTT+GGG | 0.446599 | 4.3:+2245857 | None:intergenic |
| GCCTAAGACTGACCCCACTT+TGG | 0.446742 | 4.3:+2245856 | None:intergenic |
| AACATCAGCACCATCTGAAC+TGG | 0.452271 | 4.3:+2241347 | None:intergenic |
| AAAGGGAGGCCAATGTCTCC+TGG | 0.459213 | 4.3:-2241321 | MS.gene015761:CDS |
| GGCAGCGCAACAGCAAGGAC+TGG | 0.462015 | 4.3:-2240521 | MS.gene015761:CDS |
| GAGCGACAGGCTTTGTTCCA+TGG | 0.463378 | 4.3:-2243850 | MS.gene015761:CDS |
| GCCGGTAACTGCACCTCTGC+CGG | 0.463775 | 4.3:-2245921 | MS.gene015761:CDS |
| CTGTTGCGCTGCCTCAGTAC+TGG | 0.464401 | 4.3:+2240531 | None:intergenic |
| CACCATCACTTCAACACCTT+CGG | 0.466974 | 4.3:-2240362 | MS.gene015761:CDS |
| CCCACTTTGGGTGCAGGAAG+AGG | 0.467373 | 4.3:+2245869 | None:intergenic |
| TGGTAATTGCTCTTGATTTG+AGG | 0.468628 | 4.3:+2241455 | None:intergenic |
| TGAGCCATCGACGCAGTTGA+GGG | 0.478336 | 4.3:+2241246 | None:intergenic |
| GCAGCGCAACAGCAAGGACT+GGG | 0.486221 | 4.3:-2240520 | MS.gene015761:CDS |
| AGCTCCAGTTATAGCAGCAT+TGG | 0.488511 | 4.3:+2243789 | None:intergenic |
| GATGGTGCTGATGTTCCAAA+AGG | 0.490293 | 4.3:-2241339 | MS.gene015761:CDS |
| GTTTGGAAAGCTAGGACAAC+AGG | 0.490764 | 4.3:-2243683 | MS.gene015761:intron |
| AAAGATGAAGAGGGTGCTGC+AGG | 0.491726 | 4.3:+2242731 | None:intergenic |
| CACCATCACTTCAACACCTA+TGG | 0.496104 | 4.3:-2240428 | MS.gene015761:CDS |
| GGTTGTGGGTGTTCCGGCAG+AGG | 0.497560 | 4.3:+2245908 | None:intergenic |
| TCCTCTTCCTGCACCCAAAG+TGG | 0.499712 | 4.3:-2245870 | MS.gene015761:CDS |
| CGATCGAATGGGTGAAGGTG+AGG | 0.502201 | 4.3:-2246029 | None:intergenic |
| TTCTGAAAACTGTAAATGCA+TGG | 0.504558 | 4.3:-2243899 | MS.gene015761:CDS |
| ACTGACCCCACTTTGGGTGC+AGG | 0.507298 | 4.3:+2245863 | None:intergenic |
| ATATAAATGTAGGAGGAGAC+TGG | 0.511871 | 4.3:-2244021 | MS.gene015761:intron |
| TGAAGGAAGTGAAGAGCGAC+AGG | 0.515256 | 4.3:-2243863 | MS.gene015761:CDS |
| GACTGGGGAAGTTAAAGTAT+TGG | 0.517867 | 4.3:-2244004 | MS.gene015761:CDS |
| GACCAAAGGCGTTGAAGTGA+TGG | 0.518047 | 4.3:+2240261 | None:intergenic |
| GACCAAAGGCGTTGAAGTGA+TGG | 0.518047 | 4.3:+2240294 | None:intergenic |
| ATGAGCCATCGACGCAGTTG+AGG | 0.519656 | 4.3:+2241245 | None:intergenic |
| CAGTCTTGTTTCAGAAAATG+GGG | 0.524569 | 4.3:-2240197 | MS.gene015761:CDS |
| GATCGAATGGGTGAAGGTGA+GGG | 0.528000 | 4.3:-2246028 | None:intergenic |
| AAGTGAGTTAGAGACTCAAA+AGG | 0.529599 | 4.3:-2240581 | MS.gene015761:CDS |
| AGAGCAATTACCAAACCAAA+AGG | 0.531316 | 4.3:-2241445 | MS.gene015761:CDS |
| GCGTTCTAAAGTTGCCTCAA+CGG | 0.532916 | 4.3:+2245151 | None:intergenic |
| GGTGCTGCAGGACCTCTGAC+AGG | 0.533479 | 4.3:+2242743 | None:intergenic |
| GCAGGAAGAGGAGGAAGTGT+CGG | 0.537059 | 4.3:+2245881 | None:intergenic |
| CTCTTCCTGCACCCAAAGTG+GGG | 0.540427 | 4.3:-2245868 | MS.gene015761:intron |
| GGAACTCTGGCCGTCCATCA+GGG | 0.541188 | 4.3:-2243713 | MS.gene015761:CDS |
| AGATCTATGCAGAGCAAGAG+AGG | 0.541580 | 4.3:-2241176 | MS.gene015761:CDS |
| GTTGAAGTGATGGCATTGCA+AGG | 0.542129 | 4.3:+2240271 | None:intergenic |
| GTTGAAGTGATGGCATTGCA+AGG | 0.542129 | 4.3:+2240304 | None:intergenic |
| CAATATGGCGTATCTTCAGC+AGG | 0.547825 | 4.3:-2243815 | MS.gene015761:CDS |
| TTGAAGTGATGGTGTTGCAT+GGG | 0.553400 | 4.3:+2240338 | None:intergenic |
| TTGAAGTGATGGTGTTGCAT+GGG | 0.553400 | 4.3:+2240371 | None:intergenic |
| GCTAAAGTTCCAGGAGACAT+TGG | 0.554665 | 4.3:+2241312 | None:intergenic |
| CCTGTCCCAGTACCTCGTGT+TGG | 0.556568 | 4.3:-2242704 | MS.gene015761:CDS |
| AAAATTGCGAGCAGTCCTCA+TGG | 0.561710 | 4.3:-2245107 | MS.gene015761:CDS |
| TGGGGCGATCGAATGGGTGA+AGG | 0.561905 | 4.3:-2246034 | None:intergenic |
| TAACAATGTTGACAATGAAG+CGG | 0.562048 | 4.3:-2245186 | MS.gene015761:CDS |
| CCTGAAAATTCCAGTTCAGA+TGG | 0.562427 | 4.3:-2241357 | MS.gene015761:CDS |
| TATAAATGTAGGAGGAGACT+GGG | 0.563902 | 4.3:-2244020 | MS.gene015761:intron |
| GATCCATCGTTTGGAAAGCT+AGG | 0.564234 | 4.3:-2243691 | MS.gene015761:CDS |
| CCAACACGAGGTACTGGGAC+AGG | 0.566645 | 4.3:+2242704 | None:intergenic |
| CAAACCAAAAGGAAGCTGAT+GGG | 0.567376 | 4.3:-2241434 | MS.gene015761:CDS |
| ATTCCGTTAAGAAGCTTGCT+AGG | 0.570445 | 4.3:-2245973 | MS.gene015761:CDS |
| CCAAACCAAAAGGAAGCTGA+TGG | 0.575383 | 4.3:-2241435 | MS.gene015761:CDS |
| CAAAGCTCCTTCAGGTGCTG+TGG | 0.576488 | 4.3:+2242533 | None:intergenic |
| AGAGGAGGAAGTGTCGGCGG+TGG | 0.576611 | 4.3:+2245887 | None:intergenic |
| GTTGAAGTGATGGTGTTGCA+TGG | 0.579282 | 4.3:+2240337 | None:intergenic |
| GTTGAAGTGATGGTGTTGCA+TGG | 0.579282 | 4.3:+2240370 | None:intergenic |
| TCACAATTGCCTTATGGACA+AGG | 0.579807 | 4.3:-2241207 | MS.gene015761:CDS |
| TTTAGTGCTAGTATCTGGAC+AGG | 0.580606 | 4.3:-2242504 | MS.gene015761:CDS |
| ACGGTGTTGCAAGGGACCAA+AGG | 0.581749 | 4.3:+2240247 | None:intergenic |
| AATAACGTCGGCAAAGCAGT+TGG | 0.582782 | 4.3:-2240487 | MS.gene015761:CDS |
| TCCAAACGATGGATCCCTGA+TGG | 0.585261 | 4.3:+2243699 | None:intergenic |
| TAGATAAGCACACAGAAGAT+CGG | 0.590669 | 4.3:-2241497 | MS.gene015761:CDS |
| AGCCATCGACGCAGTTGAGG+GGG | 0.590783 | 4.3:+2241248 | None:intergenic |
| GTTGAAGTGACGGTGTTGCA+AGG | 0.590921 | 4.3:+2240238 | None:intergenic |
| GACAGGAGACAAAGATGAAG+AGG | 0.594341 | 4.3:+2242721 | None:intergenic |
| AAGGTCCAACACGAGGTACT+GGG | 0.595130 | 4.3:+2242699 | None:intergenic |
| AACGATGGATCCCTGATGGA+CGG | 0.596545 | 4.3:+2243703 | None:intergenic |
| ACAAGACTGCAAGGGACCAA+AGG | 0.597556 | 4.3:+2240211 | None:intergenic |
| GACCATAGGTGCTGAAGTGA+TGG | 0.600765 | 4.3:+2240459 | None:intergenic |
| GACCATAGGTGTTGAAGTGA+TGG | 0.600889 | 4.3:+2240426 | None:intergenic |
| ATGGTGCTGATGTTCCAAAA+GGG | 0.600938 | 4.3:-2241338 | MS.gene015761:CDS |
| GAGCCATCGACGCAGTTGAG+GGG | 0.602668 | 4.3:+2241247 | None:intergenic |
| ATGGTGTTGCAAGGGACCAT+AGG | 0.603345 | 4.3:+2240412 | None:intergenic |
| ATGGTGTTGCAAGGGACCAT+AGG | 0.603345 | 4.3:+2240445 | None:intergenic |
| TGTCCTAGCTTTCCAAACGA+TGG | 0.604497 | 4.3:+2243688 | None:intergenic |
| GACCAAAGGTGTTGAAGTGA+TGG | 0.604817 | 4.3:+2240327 | None:intergenic |
| AAACCAAAAGGAAGCTGATG+GGG | 0.605517 | 4.3:-2241433 | MS.gene015761:CDS |
| ATGGCATTGCAAGGGACCAA+AGG | 0.608714 | 4.3:+2240313 | None:intergenic |
| AGTATTGGTAAAGCACAACA+AGG | 0.610516 | 4.3:-2243989 | MS.gene015761:CDS |
| AACATTCACAGTACTTCTTG+AGG | 0.610779 | 4.3:+2243941 | None:intergenic |
| TTTGCCGACGTTATTACAGG+TGG | 0.614550 | 4.3:+2240495 | None:intergenic |
| ATGGCATTGCAAGGGACCAA+AGG | 0.615195 | 4.3:+2240280 | None:intergenic |
| TCATGGAACACGTGATAACA+AGG | 0.615546 | 4.3:-2245090 | MS.gene015761:intron |
| TTGAAGTGACGGTGTTGCAA+GGG | 0.618089 | 4.3:+2240239 | None:intergenic |
| GTATTGGTAAAGCACAACAA+GGG | 0.619872 | 4.3:-2243988 | MS.gene015761:CDS |
| ACTTTGGGTGCAGGAAGAGG+AGG | 0.619897 | 4.3:+2245872 | None:intergenic |
| AAATGGGGAAATTAAGCCGA+AGG | 0.620465 | 4.3:-2240182 | MS.gene015761:CDS |
| GACCAAAGGTGTTGAAGTGA+TGG | 0.620830 | 4.3:+2240393 | None:intergenic |
| GTTGAAGTGATGGTGTTGCA+AGG | 0.625625 | 4.3:+2240403 | None:intergenic |
| GTTGAAGTGATGGTGTTGCA+AGG | 0.625625 | 4.3:+2240436 | None:intergenic |
| GCGTCGGGGATATATTGCGA+TGG | 0.627790 | 4.3:-2245230 | MS.gene015761:CDS |
| TTGAAGTGATGGTGTTGCAA+GGG | 0.633210 | 4.3:+2240404 | None:intergenic |
| TTGAAGTGATGGTGTTGCAA+GGG | 0.633210 | 4.3:+2240437 | None:intergenic |
| ATGGTGTTGCATGGGACCGA+AGG | 0.633467 | 4.3:+2240346 | None:intergenic |
| GACCGAAGGTGTTGAAGTGA+TGG | 0.634904 | 4.3:+2240360 | None:intergenic |
| ACTGAGGCAGCGCAACAGCA+AGG | 0.636738 | 4.3:-2240526 | MS.gene015761:CDS |
| ATGGTGTTGCATGGGACCAA+AGG | 0.637170 | 4.3:+2240379 | None:intergenic |
| GGCAAGACGAGAAGCCGTTG+AGG | 0.638829 | 4.3:-2245165 | MS.gene015761:CDS |
| TTGAAGTGATGGCATTGCAA+GGG | 0.640906 | 4.3:+2240272 | None:intergenic |
| TTGAAGTGATGGCATTGCAA+GGG | 0.640906 | 4.3:+2240305 | None:intergenic |
| CAAAGGTGTTGTTGAAGTGA+CGG | 0.642763 | 4.3:+2240228 | None:intergenic |
| CATACAACCACAGCACCTGA+AGG | 0.646661 | 4.3:-2242540 | MS.gene015761:CDS |
| ACAGGAGACAAAGATGAAGA+GGG | 0.650680 | 4.3:+2242722 | None:intergenic |
| GGAAGAGGAGGAAGTGTCGG+CGG | 0.650685 | 4.3:+2245884 | None:intergenic |
| TATCAGGCAAATCCTGTCAG+AGG | 0.651141 | 4.3:-2242755 | MS.gene015761:intron |
| TATTGGTAAAGCACAACAAG+GGG | 0.652902 | 4.3:-2243987 | MS.gene015761:CDS |
| GTGCTGATGTTCCAAAAGGG+AGG | 0.653307 | 4.3:-2241335 | MS.gene015761:CDS |
| AGCTGATGGGGAGAAAGTTG+TGG | 0.668913 | 4.3:-2241421 | MS.gene015761:CDS |
| TTGTTATCACGTGTTCCATG+AGG | 0.679705 | 4.3:+2245092 | None:intergenic |
| TTTCTGAAACAAGACTGCAA+GGG | 0.692177 | 4.3:+2240203 | None:intergenic |
| GGATCCACCTGTAATAACGT+CGG | 0.698709 | 4.3:-2240499 | MS.gene015761:CDS |
| CACTGAAAATACCAGTACTG+AGG | 0.701584 | 4.3:-2240542 | MS.gene015761:CDS |
| AATGTTGAAGGTCCAACACG+AGG | 0.707406 | 4.3:+2242692 | None:intergenic |
| TGGTGGTGATGAATAACCAG+AGG | 0.718034 | 4.3:+2243759 | None:intergenic |
| ATAAATGTAGGAGGAGACTG+GGG | 0.722595 | 4.3:-2244019 | MS.gene015761:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAAAAAATTAATATATGT+GGG | + | chr4.3:2241762-2241781 | None:intergenic | 10.0% |
| !!! | ATTAAGAAAAAAATAGATTT+TGG | - | chr4.3:2241454-2241473 | MS.gene015761:CDS | 10.0% |
| !! | AAAAGGAAAAAATGTAAATA+AGG | + | chr4.3:2241835-2241854 | None:intergenic | 15.0% |
| !! | AAGTAAAAAAAAATTAAAGC+CGG | - | chr4.3:2242055-2242074 | MS.gene015761:intron | 15.0% |
| !! | ACAAAAAATTAATATATGTG+GGG | + | chr4.3:2241761-2241780 | None:intergenic | 15.0% |
| !! | GAACAAAAAATTAATATATG+TGG | + | chr4.3:2241763-2241782 | None:intergenic | 15.0% |
| !! | TCTTATTATAATTGAATGAA+TGG | - | chr4.3:2243212-2243231 | MS.gene015761:intron | 15.0% |
| !!! | AAATGATTTTTTTAGCAAAA+TGG | - | chr4.3:2241514-2241533 | MS.gene015761:CDS | 15.0% |
| !!! | AATTACTTCATTTTAAATTG+TGG | + | chr4.3:2241903-2241922 | None:intergenic | 15.0% |
| !!! | ACTGAATATTTTTTGAAAAT+TGG | + | chr4.3:2245239-2245258 | None:intergenic | 15.0% |
| !!! | ATATTTTTTTTTACTCCTAA+TGG | + | chr4.3:2242655-2242674 | None:intergenic | 15.0% |
| !!! | ATTACTTCATTTTAAATTGT+GGG | + | chr4.3:2241902-2241921 | None:intergenic | 15.0% |
| !!! | GTTTTATGAAATTTTTGTAA+GGG | + | chr4.3:2245141-2245160 | None:intergenic | 15.0% |
| !!! | TATTTTTTTTTACTCCTAAT+GGG | + | chr4.3:2242654-2242673 | None:intergenic | 15.0% |
| !!! | TCAAAATCAAAATATGTTTT+AGG | + | chr4.3:2244376-2244395 | None:intergenic | 15.0% |
| !!! | TGTTTTATATGAAGAAAATA+TGG | + | chr4.3:2243178-2243197 | None:intergenic | 15.0% |
| !!! | TTTTTATTCTTATGTTTCTA+TGG | - | chr4.3:2242143-2242162 | MS.gene015761:intron | 15.0% |
| !! | AAAAAAAATCCAAAACAAAC+AGG | - | chr4.3:2241612-2241631 | MS.gene015761:intron | 20.0% |
| !! | AAAAAATTAATATATGTGGG+GGG | + | chr4.3:2241759-2241778 | None:intergenic | 20.0% |
| !! | AAAATGCATCAAACAAAATT+TGG | + | chr4.3:2241659-2241678 | None:intergenic | 20.0% |
| !! | AAATTGAGATTCTTGTTAAT+AGG | - | chr4.3:2240587-2240606 | MS.gene015761:CDS | 20.0% |
| !! | AATTAGTGTTTATTTGATTC+AGG | - | chr4.3:2240717-2240736 | MS.gene015761:intron | 20.0% |
| !! | AATTGAGATTCTTGTTAATA+GGG | - | chr4.3:2240588-2240607 | MS.gene015761:CDS | 20.0% |
| !! | ATTAAACATGAGTTTGATAT+TGG | + | chr4.3:2244653-2244672 | None:intergenic | 20.0% |
| !! | CAAAAAATTAATATATGTGG+GGG | + | chr4.3:2241760-2241779 | None:intergenic | 20.0% |
| !! | TAATTAAGCACTTCAAAAAA+AGG | + | chr4.3:2240702-2240721 | None:intergenic | 20.0% |
| !! | TGAAATTAGGAAAAGAAATT+AGG | + | chr4.3:2245566-2245585 | None:intergenic | 20.0% |
| !!! | AAAATTTCTTGAGATTTGTT+TGG | + | chr4.3:2243931-2243950 | None:intergenic | 20.0% |
| !!! | AACATATTTTGATTTTGAAG+TGG | - | chr4.3:2244378-2244397 | MS.gene015761:intron | 20.0% |
| !!! | AATTCAGAGATTTTCTTAAT+AGG | - | chr4.3:2245053-2245072 | MS.gene015761:intron | 20.0% |
| !!! | ATTCAGAGATTTTCTTAATA+GGG | - | chr4.3:2245054-2245073 | MS.gene015761:intron | 20.0% |
| !!! | ATTTTTTTTTACTCCTAATG+GGG | + | chr4.3:2242653-2242672 | None:intergenic | 20.0% |
| !!! | GATTTGCTTATATTTTGTTA+CGG | + | chr4.3:2241259-2241278 | None:intergenic | 20.0% |
| !!! | GCTTATCTATTAAATTTTTC+TGG | + | chr4.3:2244685-2244704 | None:intergenic | 20.0% |
| !!! | GGTTTTATGAAATTTTTGTA+AGG | + | chr4.3:2245142-2245161 | None:intergenic | 20.0% |
| !!! | TATTTTTTTTCATGCTTATC+AGG | - | chr4.3:2243422-2243441 | MS.gene015761:intron | 20.0% |
| !!! | TCTATTTTTTTCTTAATGCA+AGG | + | chr4.3:2241451-2241470 | None:intergenic | 20.0% |
| !!! | TGAAATAGATTTTCATTTTG+AGG | - | chr4.3:2241487-2241506 | MS.gene015761:CDS | 20.0% |
| !!! | TGTATTCTTTTGAAGTTTTT+GGG | - | chr4.3:2244578-2244597 | MS.gene015761:intron | 20.0% |
| ! | AAAAGGTTGTATTTACCATT+TGG | + | chr4.3:2244281-2244300 | None:intergenic | 25.0% |
| ! | AATAAATACACTACAGAAGT+TGG | + | chr4.3:2245453-2245472 | None:intergenic | 25.0% |
| ! | AATAATTCTGAACCTTACTT+TGG | + | chr4.3:2244141-2244160 | None:intergenic | 25.0% |
| ! | AATGCATCTCTCAATTTAAT+TGG | + | chr4.3:2242680-2242699 | None:intergenic | 25.0% |
| ! | AATTAGAATAGCATTTCCTT+GGG | - | chr4.3:2243002-2243021 | MS.gene015761:intron | 25.0% |
| ! | ATGCATCTCTCAATTTAATT+GGG | + | chr4.3:2242679-2242698 | None:intergenic | 25.0% |
| ! | ATGGACTTCAATATAAATGT+AGG | - | chr4.3:2242162-2242181 | MS.gene015761:intron | 25.0% |
| ! | CAATTGAATAGAATAATCGA+AGG | + | chr4.3:2244610-2244629 | None:intergenic | 25.0% |
| ! | CTTCGATTATTCTATTCAAT+TGG | - | chr4.3:2244608-2244627 | MS.gene015761:intron | 25.0% |
| ! | TTCAAAATTTATGTACAGGT+AGG | - | chr4.3:2243530-2243549 | MS.gene015761:intron | 25.0% |
| ! | TTGAAGTGGAATTAATTCTA+TGG | - | chr4.3:2244392-2244411 | MS.gene015761:intron | 25.0% |
| ! | TTTACAAGTATCTTAACAAC+AGG | + | chr4.3:2242020-2242039 | None:intergenic | 25.0% |
| !! | ACCTGTACATAAATTTTGAA+GGG | + | chr4.3:2243530-2243549 | None:intergenic | 25.0% |
| !! | ATTGAGGATTTTTGTTGATA+AGG | - | chr4.3:2241729-2241748 | MS.gene015761:intron | 25.0% |
| !! | CAAATAACACAATTGATGAT+GGG | + | chr4.3:2243754-2243773 | None:intergenic | 25.0% |
| !! | TACCTGTACATAAATTTTGA+AGG | + | chr4.3:2243531-2243550 | None:intergenic | 25.0% |
| !! | TGCTTATATTTTGTTACAGA+AGG | - | chr4.3:2241679-2241698 | MS.gene015761:intron | 25.0% |
| !! | TTTTTCCTTTTATTAGAAGC+AGG | - | chr4.3:2241844-2241863 | MS.gene015761:intron | 25.0% |
| !!! | ATTTTGGAAATTAGGTAAAC+TGG | - | chr4.3:2242569-2242588 | MS.gene015761:intron | 25.0% |
| !!! | GTGTATTCTTTTGAAGTTTT+TGG | - | chr4.3:2244577-2244596 | MS.gene015761:intron | 25.0% |
| !!! | GTTGTGAATTTTTTGTATTG+AGG | - | chr4.3:2241168-2241187 | MS.gene015761:CDS | 25.0% |
| !!! | TACTTTGTTTTAGTTCATTG+AGG | - | chr4.3:2241713-2241732 | MS.gene015761:intron | 25.0% |
| !!! | TATTGGTTCAAATTTGATGA+TGG | - | chr4.3:2240629-2240648 | MS.gene015761:intron | 25.0% |
| !!! | TTGAGGATTTTTGTTGATAA+GGG | - | chr4.3:2241730-2241749 | MS.gene015761:intron | 25.0% |
| !!! | TTTTGGAAATTAGGTAAACT+GGG | - | chr4.3:2242570-2242589 | MS.gene015761:intron | 25.0% |
| AAAAGCGAAGTCTAAGTTAT+TGG | - | chr4.3:2240612-2240631 | MS.gene015761:intron | 30.0% | |
| AAACGAAAACTAAAATGCAC+TGG | + | chr4.3:2241812-2241831 | None:intergenic | 30.0% | |
| AATTTAGAGAACTGTGATAC+TGG | - | chr4.3:2245210-2245229 | MS.gene015761:CDS | 30.0% | |
| AATTTATGTACAGGTAGGAT+TGG | - | chr4.3:2243535-2243554 | MS.gene015761:intron | 30.0% | |
| ACAAAATTTCAGCCAAAGTA+AGG | - | chr4.3:2244126-2244145 | MS.gene015761:intron | 30.0% | |
| AGAAGAAAAGTCTCCAAAAA+AGG | + | chr4.3:2240655-2240674 | None:intergenic | 30.0% | |
| AGCAAATCTGAGTCAAATAA+AGG | - | chr4.3:2241271-2241290 | MS.gene015761:CDS | 30.0% | |
| ATGTCATAATTCCATACCAT+TGG | + | chr4.3:2241989-2242008 | None:intergenic | 30.0% | |
| CAAAAACACTTACAGGTATA+TGG | - | chr4.3:2243715-2243734 | MS.gene015761:CDS | 30.0% | |
| CAATTAGAATAGCATTTCCT+TGG | - | chr4.3:2243001-2243020 | MS.gene015761:intron | 30.0% | |
| CTTAATAGGGTTATCACTAT+GGG | - | chr4.3:2245067-2245086 | MS.gene015761:intron | 30.0% | |
| GACTTCAATATAAATGTAGG+AGG | - | chr4.3:2242165-2242184 | MS.gene015761:intron | 30.0% | |
| GCAAATAACACAATTGATGA+TGG | + | chr4.3:2243755-2243774 | None:intergenic | 30.0% | |
| GCAAATCTGAGTCAAATAAA+GGG | - | chr4.3:2241272-2241291 | MS.gene015761:CDS | 30.0% | |
| GGTCCAAATAAATCAACTTT+GGG | + | chr4.3:2241638-2241657 | None:intergenic | 30.0% | |
| TAACAATGTTGACAATGAAG+CGG | - | chr4.3:2241007-2241026 | MS.gene015761:intron | 30.0% | |
| TAGCAGCTTAATTTAATGAG+CGG | - | chr4.3:2243950-2243969 | MS.gene015761:CDS | 30.0% | |
| TCTTAATAGGGTTATCACTA+TGG | - | chr4.3:2245066-2245085 | MS.gene015761:intron | 30.0% | |
| TGGAGATCAAAACAACAATA+TGG | - | chr4.3:2242363-2242382 | MS.gene015761:intron | 30.0% | |
| TGGTCCAAATAAATCAACTT+TGG | + | chr4.3:2241639-2241658 | None:intergenic | 30.0% | |
| TTTCAGACAGTTAAACATTG+AGG | + | chr4.3:2244517-2244536 | None:intergenic | 30.0% | |
| TTTGGAAATTAGGTAAACTG+GGG | - | chr4.3:2242571-2242590 | MS.gene015761:intron | 30.0% | |
| ! | AAAAATTCAGTCTTTTCTCG+TGG | - | chr4.3:2243131-2243150 | MS.gene015761:intron | 30.0% |
| ! | ACGAGAAAAGACTGAATTTT+TGG | + | chr4.3:2243132-2243151 | None:intergenic | 30.0% |
| ! | ATATTGTGAATGTTTTGCGT+CGG | - | chr4.3:2240947-2240966 | MS.gene015761:intron | 30.0% |
| ! | ATGGATTGCAAAAACTTTGA+AGG | - | chr4.3:2242313-2242332 | MS.gene015761:intron | 30.0% |
| ! | ATTAACTTGATTGCTGTTGA+AGG | - | chr4.3:2243613-2243632 | MS.gene015761:intron | 30.0% |
| ! | GCTTAACTTTTTGTAAAGGT+TGG | - | chr4.3:2241133-2241152 | MS.gene015761:CDS | 30.0% |
| ! | GGTGAATTTGAAATTTAGGA+TGG | - | chr4.3:2244478-2244497 | MS.gene015761:intron | 30.0% |
| ! | GTAAAACTTGATAATACTGC+AGG | - | chr4.3:2242532-2242551 | MS.gene015761:CDS | 30.0% |
| ! | GTCTGGTGAATTTGAAATTT+AGG | - | chr4.3:2244474-2244493 | MS.gene015761:intron | 30.0% |
| ! | GTTAAACATTGAGGTATCTT+AGG | + | chr4.3:2244508-2244527 | None:intergenic | 30.0% |
| ! | GTTTTCAGAACAAAGAATGT+TGG | + | chr4.3:2242284-2242303 | None:intergenic | 30.0% |
| ! | TAGGTTTACCAAACATTTTG+AGG | + | chr4.3:2244420-2244439 | None:intergenic | 30.0% |
| ! | TCTTGAGATTTGTTTGGAAA+GGG | + | chr4.3:2243925-2243944 | None:intergenic | 30.0% |
| ! | TGAGTGTACTGATATTGATT+TGG | - | chr4.3:2243823-2243842 | MS.gene015761:CDS | 30.0% |
| ! | TTATATTTTGTTACGGAGGA+GGG | + | chr4.3:2241252-2241271 | None:intergenic | 30.0% |
| ! | TTCTGAAAACTGTAAATGCA+TGG | - | chr4.3:2242294-2242313 | MS.gene015761:intron | 30.0% |
| ! | TTCTTGAGATTTGTTTGGAA+AGG | + | chr4.3:2243926-2243945 | None:intergenic | 30.0% |
| ! | TTGCTTATATTTTGTTACGG+AGG | + | chr4.3:2241256-2241275 | None:intergenic | 30.0% |
| !! | ATACAGTTTTGTGTTTTCGT+CGG | - | chr4.3:2243788-2243807 | MS.gene015761:CDS | 30.0% |
| !! | ATGGTTCTGAACTTTGATAA+AGG | - | chr4.3:2245277-2245296 | MS.gene015761:intron | 30.0% |
| !! | GATGTTTTGAGTAAGCAAAA+AGG | + | chr4.3:2242111-2242130 | None:intergenic | 30.0% |
| !! | GGTGTCATTGTAAAAAATCT+GGG | - | chr4.3:2242227-2242246 | MS.gene015761:intron | 30.0% |
| !! | GTACTGATATTGATTTGGAA+AGG | - | chr4.3:2243828-2243847 | MS.gene015761:CDS | 30.0% |
| !! | TAAAGTGTTGCAAATAAAGC+AGG | + | chr4.3:2245538-2245557 | None:intergenic | 30.0% |
| !! | TATACCTGTAAGTGTTTTTG+TGG | + | chr4.3:2243715-2243734 | None:intergenic | 30.0% |
| !! | TTGAGTTGAAATGAACACAT+TGG | + | chr4.3:2242759-2242778 | None:intergenic | 30.0% |
| !! | TTTTGAGTAAGCAAAAAGGA+AGG | + | chr4.3:2242107-2242126 | None:intergenic | 30.0% |
| !!! | AATTTGATGATGGCCTTTTT+TGG | - | chr4.3:2240639-2240658 | MS.gene015761:intron | 30.0% |
| !!! | AGGGGTTTATTTTGGAAATT+AGG | - | chr4.3:2242561-2242580 | MS.gene015761:CDS | 30.0% |
| !!! | GAACTAGCAATTTAGCTTTT+GGG | + | chr4.3:2243321-2243340 | None:intergenic | 30.0% |
| !!! | TATTGTTGTTTTGATCTCCA+TGG | + | chr4.3:2242363-2242382 | None:intergenic | 30.0% |
| !!! | TGAACTAGCAATTTAGCTTT+TGG | + | chr4.3:2243322-2243341 | None:intergenic | 30.0% |
| AAAGTCCAAATGCTATGAAC+GGG | + | chr4.3:2245166-2245185 | None:intergenic | 35.0% | |
| AAATCAAGTATGTGACTGTG+AGG | - | chr4.3:2243239-2243258 | MS.gene015761:intron | 35.0% | |
| AAATGTGGAGAAGTTTGGAA+AGG | + | chr4.3:2243890-2243909 | None:intergenic | 35.0% | |
| AACACATTGGACCAAATCAA+GGG | + | chr4.3:2242746-2242765 | None:intergenic | 35.0% | |
| AACATTCACAGTACTTCTTG+AGG | + | chr4.3:2242255-2242274 | None:intergenic | 35.0% | |
| AACTCTGTGGTTGAGAAATT+AGG | - | chr4.3:2240515-2240534 | MS.gene015761:CDS | 35.0% | |
| AAGTGAGTTAGAGACTCAAA+AGG | - | chr4.3:2245612-2245631 | MS.gene015761:intron | 35.0% | |
| AAGTTTGGAAAGGGAAAAAG+CGG | + | chr4.3:2243880-2243899 | None:intergenic | 35.0% | |
| AATGTGGAGAAGTTTGGAAA+GGG | + | chr4.3:2243889-2243908 | None:intergenic | 35.0% | |
| AATTAGGTAAACTGGGGAAA+TGG | - | chr4.3:2242577-2242596 | MS.gene015761:intron | 35.0% | |
| ACATCTTCACAATTGCCTTA+TGG | - | chr4.3:2244980-2244999 | MS.gene015761:intron | 35.0% | |
| AGAGCAATTACCAAACCAAA+AGG | - | chr4.3:2244748-2244767 | MS.gene015761:intron | 35.0% | |
| AGCAGCTTAATTTAATGAGC+GGG | - | chr4.3:2243951-2243970 | MS.gene015761:CDS | 35.0% | |
| AGCGAGAAAAAGAAAAGGTT+CGG | - | chr4.3:2242459-2242478 | MS.gene015761:intron | 35.0% | |
| ATATAAATGTAGGAGGAGAC+TGG | - | chr4.3:2242172-2242191 | MS.gene015761:intron | 35.0% | |
| ATCACTATGGGCGAAATAAA+TGG | - | chr4.3:2245079-2245098 | MS.gene015761:intron | 35.0% | |
| ATCCTCCTGCTTCTAATAAA+AGG | + | chr4.3:2241852-2241871 | None:intergenic | 35.0% | |
| ATGAAGCCTTTCTTTCCAAT+AGG | + | chr4.3:2242818-2242837 | None:intergenic | 35.0% | |
| ATTCAGTTTGCATCGAAGAT+AGG | - | chr4.3:2245252-2245271 | MS.gene015761:intron | 35.0% | |
| ATTTGTCAATCCATTGAGCT+TGG | + | chr4.3:2244166-2244185 | None:intergenic | 35.0% | |
| CAATTGCAGCAAATAAGTTC+CGG | + | chr4.3:2240889-2240908 | None:intergenic | 35.0% | |
| CACTATCCTATTGGAAAGAA+AGG | - | chr4.3:2242809-2242828 | MS.gene015761:intron | 35.0% | |
| GAAAGTCCAAATGCTATGAA+CGG | + | chr4.3:2245167-2245186 | None:intergenic | 35.0% | |
| GAATTATTCACCAAGCTCAA+TGG | - | chr4.3:2244153-2244172 | MS.gene015761:intron | 35.0% | |
| GATATATGCTTCCCTTGATT+TGG | - | chr4.3:2242732-2242751 | MS.gene015761:CDS | 35.0% | |
| GATGCAAATCCACTCTTATA+GGG | + | chr4.3:2241953-2241972 | None:intergenic | 35.0% | |
| GCCCTTCAAAATTTATGTAC+AGG | - | chr4.3:2243526-2243545 | MS.gene015761:intron | 35.0% | |
| GTATGGAATTATGACATGAC+AGG | - | chr4.3:2241992-2242011 | MS.gene015761:intron | 35.0% | |
| GTCTCAAAACACTATCCTAT+TGG | - | chr4.3:2242800-2242819 | MS.gene015761:intron | 35.0% | |
| TAGATAAGCACACAGAAGAT+CGG | - | chr4.3:2244696-2244715 | MS.gene015761:intron | 35.0% | |
| TATAAATGTAGGAGGAGACT+GGG | - | chr4.3:2242173-2242192 | MS.gene015761:intron | 35.0% | |
| TATTGGTAAAGCACAACAAG+GGG | - | chr4.3:2242206-2242225 | MS.gene015761:intron | 35.0% | |
| TCATAATTCCATACCATTGG+AGG | + | chr4.3:2241986-2242005 | None:intergenic | 35.0% | |
| TCATGTAACATTTCCCCATT+AGG | - | chr4.3:2242637-2242656 | MS.gene015761:intron | 35.0% | |
| TGATGCAAATCCACTCTTAT+AGG | + | chr4.3:2241954-2241973 | None:intergenic | 35.0% | |
| TTCAGTTTGCATCGAAGATA+GGG | - | chr4.3:2245253-2245272 | MS.gene015761:intron | 35.0% | |
| TTGACATAGCAATAGAAAGC+AGG | + | chr4.3:2245411-2245430 | None:intergenic | 35.0% | |
| TTGTTGTATCATCAACTCTG+TGG | - | chr4.3:2240502-2240521 | MS.gene015761:CDS | 35.0% | |
| TTGTTTGGAAAGGGAAAAAG+CGG | + | chr4.3:2243916-2243935 | None:intergenic | 35.0% | |
| ! | AGCATCTTTTGTCTCAAAGT+TGG | + | chr4.3:2240774-2240793 | None:intergenic | 35.0% |
| ! | AGGCCCAAAGTTGATTTATT+TGG | - | chr4.3:2241632-2241651 | MS.gene015761:intron | 35.0% |
| ! | CTTATATTTTGTTACGGAGG+AGG | + | chr4.3:2241253-2241272 | None:intergenic | 35.0% |
| ! | GACTTTGATTTAGGAGATTC+TGG | + | chr4.3:2240746-2240765 | None:intergenic | 35.0% |
| ! | GCAGGCTTAACTTTTTGTAA+AGG | - | chr4.3:2241129-2241148 | MS.gene015761:CDS | 35.0% |
| ! | GCATCTTTTGTCTCAAAGTT+GGG | + | chr4.3:2240773-2240792 | None:intergenic | 35.0% |
| ! | GTATTGGTAAAGCACAACAA+GGG | - | chr4.3:2242205-2242224 | MS.gene015761:intron | 35.0% |
| ! | GTTTTCATTGAGAACCAGTA+GGG | + | chr4.3:2243067-2243086 | None:intergenic | 35.0% |
| ! | TATTGTGAATGTTTTGCGTC+GGG | - | chr4.3:2240948-2240967 | MS.gene015761:intron | 35.0% |
| ! | TGGTAATTGCTCTTGATTTG+AGG | + | chr4.3:2244741-2244760 | None:intergenic | 35.0% |
| ! | TTCCTTTTATTAGAAGCAGG+AGG | - | chr4.3:2241847-2241866 | MS.gene015761:intron | 35.0% |
| ! | TTGGGTCTTGACTTTGATTT+AGG | + | chr4.3:2240755-2240774 | None:intergenic | 35.0% |
| ! | TTTCAGTGCGATTGATGATT+GGG | + | chr4.3:2245639-2245658 | None:intergenic | 35.0% |
| ! | TTTTCATTGAGAACCAGTAG+GGG | + | chr4.3:2243066-2243085 | None:intergenic | 35.0% |
| ! | TTTTCCAACACAAGAAATGC+CGG | + | chr4.3:2242077-2242096 | None:intergenic | 35.0% |
| !! | AACACTTCGTCTCTGAAATT+AGG | + | chr4.3:2245579-2245598 | None:intergenic | 35.0% |
| !! | AAGCTCAATGGATTGACAAA+TGG | - | chr4.3:2244165-2244184 | MS.gene015761:intron | 35.0% |
| !! | AGTATTGGTAAAGCACAACA+AGG | - | chr4.3:2242204-2242223 | MS.gene015761:intron | 35.0% |
| !! | CAGTCTTGTTTCAGAAAATG+GGG | - | chr4.3:2245996-2246015 | MS.gene015761:CDS | 35.0% |
| !! | GCAGTCTTGTTTCAGAAAAT+GGG | - | chr4.3:2245995-2246014 | MS.gene015761:CDS | 35.0% |
| !! | GGGTGTCATTGTAAAAAATC+TGG | - | chr4.3:2242226-2242245 | MS.gene015761:intron | 35.0% |
| !! | TGAGAGTTTGATTTGCCAAA+TGG | - | chr4.3:2244263-2244282 | MS.gene015761:intron | 35.0% |
| !! | TGCAGTCTTGTTTCAGAAAA+TGG | - | chr4.3:2245994-2246013 | MS.gene015761:CDS | 35.0% |
| !! | TTTCTGAAACAAGACTGCAA+GGG | + | chr4.3:2245993-2246012 | None:intergenic | 35.0% |
| !! | TTTTCAGTGCGATTGATGAT+TGG | + | chr4.3:2245640-2245659 | None:intergenic | 35.0% |
| !!! | GAATCCAATTGTGCGTTTTT+TGG | + | chr4.3:2240204-2240223 | None:intergenic | 35.0% |
| !!! | TCTGTTTTAGTGCTAGTATC+TGG | - | chr4.3:2243684-2243703 | MS.gene015761:CDS | 35.0% |
| !!! | TTGCACTGTTTTTGCTTCTT+TGG | + | chr4.3:2240800-2240819 | None:intergenic | 35.0% |
| !!! | TTTTCTGAAACAAGACTGCA+AGG | + | chr4.3:2245994-2246013 | None:intergenic | 35.0% |
| AAACCAAAAGGAAGCTGATG+GGG | - | chr4.3:2244760-2244779 | MS.gene015761:intron | 40.0% | |
| AAACCTTAAACCTGCACCAA+AGG | + | chr4.3:2242975-2242994 | None:intergenic | 40.0% | |
| AAAGAAAAGGTTCGGAACTC+TGG | - | chr4.3:2242467-2242486 | MS.gene015761:intron | 40.0% | |
| AAATGGGGAAATTAAGCCGA+AGG | - | chr4.3:2246011-2246030 | MS.gene015761:CDS | 40.0% | |
| AACCTTAAACCTGCACCAAA+GGG | + | chr4.3:2242974-2242993 | None:intergenic | 40.0% | |
| AACGCAATCCAAATGCCTTT+AGG | - | chr4.3:2241060-2241079 | MS.gene015761:intron | 40.0% | |
| AAGTCCAAATGCTATGAACG+GGG | + | chr4.3:2245165-2245184 | None:intergenic | 40.0% | |
| AATCACAAGTTAGTAGCAGC+TGG | + | chr4.3:2245377-2245396 | None:intergenic | 40.0% | |
| ACAGGAGACAAAGATGAAGA+GGG | + | chr4.3:2243474-2243493 | None:intergenic | 40.0% | |
| ACCAAAGAATGAGAAACCCA+AGG | + | chr4.3:2243021-2243040 | None:intergenic | 40.0% | |
| AGTTTGGAAAGGGAAAAAGC+GGG | + | chr4.3:2243879-2243898 | None:intergenic | 40.0% | |
| ATAAATGTAGGAGGAGACTG+GGG | - | chr4.3:2242174-2242193 | MS.gene015761:intron | 40.0% | |
| ATAATACTGCAGGCAGTTCA+GGG | - | chr4.3:2242542-2242561 | MS.gene015761:CDS | 40.0% | |
| CAAACCAAAAGGAAGCTGAT+GGG | - | chr4.3:2244759-2244778 | MS.gene015761:intron | 40.0% | |
| CACATCAATGCTAAAGTTCC+AGG | + | chr4.3:2244893-2244912 | None:intergenic | 40.0% | |
| CACTGAAAATACCAGTACTG+AGG | - | chr4.3:2245651-2245670 | MS.gene015761:intron | 40.0% | |
| CCAGTAGCGAGAAAAAGAAA+AGG | - | chr4.3:2242454-2242473 | MS.gene015761:intron | 40.0% | |
| CCTGAAAATTCCAGTTCAGA+TGG | - | chr4.3:2244836-2244855 | MS.gene015761:intron | 40.0% | |
| CGTTTGACTACACGTAAACA+AGG | + | chr4.3:2244239-2244258 | None:intergenic | 40.0% | |
| CTGCAAAATGCTGTCTCAAT+TGG | + | chr4.3:2242617-2242636 | None:intergenic | 40.0% | |
| CTTCCATCTTTGCTCAATGT+GGG | - | chr4.3:2242862-2242881 | MS.gene015761:intron | 40.0% | |
| GAACACATTGGACCAAATCA+AGG | + | chr4.3:2242747-2242766 | None:intergenic | 40.0% | |
| GACTGGGGAAGTTAAAGTAT+TGG | - | chr4.3:2242189-2242208 | MS.gene015761:intron | 40.0% | |
| GGAATTCACTCTAATCCCTT+TGG | - | chr4.3:2242956-2242975 | MS.gene015761:intron | 40.0% | |
| GTGAATTCCACTATGAGTGT+CGG | + | chr4.3:2242945-2242964 | None:intergenic | 40.0% | |
| GTGGATTTGCATCAGAAGTT+GGG | - | chr4.3:2241960-2241979 | MS.gene015761:intron | 40.0% | |
| TACCACGATAAGTTCACTTC+TGG | - | chr4.3:2243280-2243299 | MS.gene015761:intron | 40.0% | |
| TATCCCACATTGAGCAAAGA+TGG | + | chr4.3:2242868-2242887 | None:intergenic | 40.0% | |
| TCACAATTGCCTTATGGACA+AGG | - | chr4.3:2244986-2245005 | MS.gene015761:intron | 40.0% | |
| TCATGGAACACGTGATAACA+AGG | - | chr4.3:2241103-2241122 | MS.gene015761:intron | 40.0% | |
| TCCTTGGGTTTCTCATTCTT+TGG | - | chr4.3:2243017-2243036 | MS.gene015761:intron | 40.0% | |
| TCTTTCGTTCCTTGTCCATA+AGG | + | chr4.3:2244998-2245017 | None:intergenic | 40.0% | |
| TGTTTGGAAAGGGAAAAAGC+GGG | + | chr4.3:2243915-2243934 | None:intergenic | 40.0% | |
| TTGAAGTGATGGCATTGCAA+GGG | + | chr4.3:2245891-2245910 | None:intergenic | 40.0% | |
| TTGAGTCTCTAACTCACTTC+TGG | + | chr4.3:2245611-2245630 | None:intergenic | 40.0% | |
| TTGTTATCACGTGTTCCATG+AGG | + | chr4.3:2241104-2241123 | None:intergenic | 40.0% | |
| TTTAGTGCTAGTATCTGGAC+AGG | - | chr4.3:2243689-2243708 | MS.gene015761:CDS | 40.0% | |
| TTTCATTGAGAACCAGTAGG+GGG | + | chr4.3:2243065-2243084 | None:intergenic | 40.0% | |
| TTTGAAGGGCCTAATGTTGA+AGG | + | chr4.3:2243516-2243535 | None:intergenic | 40.0% | |
| TTTGCATCGAAGATAGGGAA+TGG | - | chr4.3:2245258-2245277 | MS.gene015761:intron | 40.0% | |
| ! | AACTTTGGGCCTGTTTGTTT+TGG | + | chr4.3:2241624-2241643 | None:intergenic | 40.0% |
| ! | AGTGGATTTGCATCAGAAGT+TGG | - | chr4.3:2241959-2241978 | MS.gene015761:intron | 40.0% |
| ! | ATTCCGTTAAGAAGCTTGCT+AGG | - | chr4.3:2240220-2240239 | MS.gene015761:CDS | 40.0% |
| ! | ATTGTGAATGTTTTGCGTCG+GGG | - | chr4.3:2240949-2240968 | MS.gene015761:intron | 40.0% |
| ! | CAGAACAAAGAATGTTGGCT+TGG | + | chr4.3:2242279-2242298 | None:intergenic | 40.0% |
| ! | CCAAAAGTTTGAGTTTGCGA+TGG | - | chr4.3:2242905-2242924 | MS.gene015761:intron | 40.0% |
| ! | CCATCGCAAACTCAAACTTT+TGG | + | chr4.3:2242908-2242927 | None:intergenic | 40.0% |
| ! | CCATCTGAACTGGAATTTTC+AGG | + | chr4.3:2244839-2244858 | None:intergenic | 40.0% |
| ! | CCTTTTCTTTTTCTCGCTAC+TGG | + | chr4.3:2242457-2242476 | None:intergenic | 40.0% |
| ! | CGGAACTTATTTGCTGCAAT+TGG | - | chr4.3:2240887-2240906 | MS.gene015761:intron | 40.0% |
| ! | CGTTTTCATTGAGAACCAGT+AGG | + | chr4.3:2243068-2243087 | None:intergenic | 40.0% |
| ! | TTTCTTTTTCTCGCTACTGG+TGG | + | chr4.3:2242454-2242473 | None:intergenic | 40.0% |
| !! | ATGGTGCTGATGTTCCAAAA+GGG | - | chr4.3:2244855-2244874 | MS.gene015761:intron | 40.0% |
| !! | CAAAGGTGTTGTTGAAGTGA+CGG | + | chr4.3:2245968-2245987 | None:intergenic | 40.0% |
| !! | TGAACTGGAATTTTCAGGAC+TGG | + | chr4.3:2244834-2244853 | None:intergenic | 40.0% |
| !! | TTGAAGTGATGGTGTTGCAA+GGG | + | chr4.3:2245759-2245778 | None:intergenic | 40.0% |
| !! | TTGAAGTGATGGTGTTGCAT+GGG | + | chr4.3:2245825-2245844 | None:intergenic | 40.0% |
| !!! | ATTTTCGGCCTAAAGGCATT+TGG | + | chr4.3:2241071-2241090 | None:intergenic | 40.0% |
| !!! | CAGGACTGGTTTTATCAGTT+TGG | + | chr4.3:2244820-2244839 | None:intergenic | 40.0% |
| !!! | CCAATTGTGCGTTTTTTGGA+GGG | + | chr4.3:2240200-2240219 | None:intergenic | 40.0% |
| !!! | TCCAATTGTGCGTTTTTTGG+AGG | + | chr4.3:2240201-2240220 | None:intergenic | 40.0% |
| AAAATTGCGAGCAGTCCTCA+TGG | - | chr4.3:2241086-2241105 | MS.gene015761:intron | 45.0% | |
| AAACAGAGCAAAGCTCCTTC+AGG | + | chr4.3:2243671-2243690 | None:intergenic | 45.0% | |
| AAAGCCGGCATTTCTTGTGT+TGG | - | chr4.3:2242070-2242089 | MS.gene015761:intron | 45.0% | |
| AACAGACAATGATGCGCTAG+CGG | + | chr4.3:2241226-2241245 | None:intergenic | 45.0% | |
| AACATCAGCACCATCTGAAC+TGG | + | chr4.3:2244849-2244868 | None:intergenic | 45.0% | |
| AATAACGTCGGCAAAGCAGT+TGG | - | chr4.3:2245706-2245725 | MS.gene015761:intron | 45.0% | |
| AATCCACTCTTATAGGGACG+TGG | + | chr4.3:2241947-2241966 | None:intergenic | 45.0% | |
| AATGTTGAAGGTCCAACACG+AGG | + | chr4.3:2243504-2243523 | None:intergenic | 45.0% | |
| AGATCTATGCAGAGCAAGAG+AGG | - | chr4.3:2245017-2245036 | MS.gene015761:intron | 45.0% | |
| AGCTCCAGTTATAGCAGCAT+TGG | + | chr4.3:2242407-2242426 | None:intergenic | 45.0% | |
| AGTCCAAATGCTATGAACGG+GGG | + | chr4.3:2245164-2245183 | None:intergenic | 45.0% | |
| CAATATGGCGTATCTTCAGC+AGG | - | chr4.3:2242378-2242397 | MS.gene015761:intron | 45.0% | |
| CACCATCACTTCAACACCTA+TGG | - | chr4.3:2245765-2245784 | MS.gene015761:intron | 45.0% | |
| CACCATCACTTCAACACCTT+CGG | - | chr4.3:2245798-2245817 | MS.gene015761:intron | 45.0% | |
| CACCATCACTTCAACACCTT+TGG | - | chr4.3:2245798-2245817 | MS.gene015761:intron | 45.0% | |
| CACGTGATAACAAGGTATGC+AGG | - | chr4.3:2241111-2241130 | MS.gene015761:intron | 45.0% | |
| CAGCAAATAAGTTCCGGCAA+AGG | + | chr4.3:2240883-2240902 | None:intergenic | 45.0% | |
| CAGGCCACAAAAACACTTAC+AGG | - | chr4.3:2243708-2243727 | MS.gene015761:CDS | 45.0% | |
| CCAAACCAAAAGGAAGCTGA+TGG | - | chr4.3:2244758-2244777 | MS.gene015761:intron | 45.0% | |
| CCCTCCAAAAAACGCACAAT+TGG | - | chr4.3:2240197-2240216 | MS.gene015761:CDS | 45.0% | |
| CGTCACTTCAACAACACCTT+TGG | - | chr4.3:2245966-2245985 | MS.gene015761:CDS | 45.0% | |
| CGTGTTGGACCTTCAACATT+AGG | - | chr4.3:2243504-2243523 | MS.gene015761:intron | 45.0% | |
| CTATGGCGCCTCAAAATGTT+TGG | - | chr4.3:2244409-2244428 | MS.gene015761:intron | 45.0% | |
| CTCTGTAGGAAAAGCAGGAA+AGG | - | chr4.3:2244321-2244340 | MS.gene015761:intron | 45.0% | |
| CTGCCTAGCAAGCTTCTTAA+CGG | + | chr4.3:2240226-2240245 | None:intergenic | 45.0% | |
| GACAAGCAATCCTGACAACT+GGG | + | chr4.3:2244443-2244462 | None:intergenic | 45.0% | |
| GACAGGAGACAAAGATGAAG+AGG | + | chr4.3:2243475-2243494 | None:intergenic | 45.0% | |
| GACCAGAAGTGAACTTATCG+TGG | + | chr4.3:2243285-2243304 | None:intergenic | 45.0% | |
| GATAATACTGCAGGCAGTTC+AGG | - | chr4.3:2242541-2242560 | MS.gene015761:CDS | 45.0% | |
| GATCCATCGTTTGGAAAGCT+AGG | - | chr4.3:2242502-2242521 | MS.gene015761:CDS | 45.0% | |
| GCGAATTACAGCAGATCTCA+TGG | - | chr4.3:2245320-2245339 | MS.gene015761:intron | 45.0% | |
| GCTAAAGTTCCAGGAGACAT+TGG | + | chr4.3:2244884-2244903 | None:intergenic | 45.0% | |
| GCTGCTATAACTGGAGCTAT+TGG | - | chr4.3:2242409-2242428 | MS.gene015761:intron | 45.0% | |
| GCTTCCATCTTTGCTCAATG+TGG | - | chr4.3:2242861-2242880 | MS.gene015761:intron | 45.0% | |
| GGATCCACCTGTAATAACGT+CGG | - | chr4.3:2245694-2245713 | MS.gene015761:intron | 45.0% | |
| GGGGTAAATGTGGAGAAGTT+TGG | + | chr4.3:2243895-2243914 | None:intergenic | 45.0% | |
| GTTGAAGTGATGGCATTGCA+AGG | + | chr4.3:2245892-2245911 | None:intergenic | 45.0% | |
| GTTTGGAAAGCTAGGACAAC+AGG | - | chr4.3:2242510-2242529 | MS.gene015761:CDS | 45.0% | |
| GTTTGGAAAGGGAAAAAGCG+GGG | + | chr4.3:2243878-2243897 | None:intergenic | 45.0% | |
| TAAACAGCAGCTTCCTCTGT+AGG | - | chr4.3:2244307-2244326 | MS.gene015761:intron | 45.0% | |
| TAATACTGCAGGCAGTTCAG+GGG | - | chr4.3:2242543-2242562 | MS.gene015761:CDS | 45.0% | |
| TATCAGGCAAATCCTGTCAG+AGG | - | chr4.3:2243438-2243457 | MS.gene015761:intron | 45.0% | |
| TGACAAGCAATCCTGACAAC+TGG | + | chr4.3:2244444-2244463 | None:intergenic | 45.0% | |
| TGCTTTGCCGACGTTATTAC+AGG | + | chr4.3:2245704-2245723 | None:intergenic | 45.0% | |
| TTCATTGAGAACCAGTAGGG+GGG | + | chr4.3:2243064-2243083 | None:intergenic | 45.0% | |
| TTTGCCGACGTTATTACAGG+TGG | + | chr4.3:2245701-2245720 | None:intergenic | 45.0% | |
| ! | ATCCCTTTGGTGCAGGTTTA+AGG | - | chr4.3:2242969-2242988 | MS.gene015761:intron | 45.0% |
| ! | CAGCTCGATTTCAACGCTTT+TGG | - | chr4.3:2240243-2240262 | MS.gene015761:CDS | 45.0% |
| ! | CTCGATTTCAACGCTTTTGG+TGG | - | chr4.3:2240246-2240265 | MS.gene015761:CDS | 45.0% |
| ! | GCTGCTGTTTACAGCTCAAA+AGG | + | chr4.3:2244298-2244317 | None:intergenic | 45.0% |
| ! | GGCAGTTCAGGGGTTTATTT+TGG | - | chr4.3:2242553-2242572 | MS.gene015761:CDS | 45.0% |
| ! | TGAGCGGGCATTGTCTATTA+TGG | - | chr4.3:2243966-2243985 | MS.gene015761:CDS | 45.0% |
| ! | TGAGGACTGCTCGCAATTTT+CGG | + | chr4.3:2241086-2241105 | None:intergenic | 45.0% |
| ! | TGGTGGTGATGAATAACCAG+AGG | + | chr4.3:2242437-2242456 | None:intergenic | 45.0% |
| ! | TGTCCTAGCTTTCCAAACGA+TGG | + | chr4.3:2242508-2242527 | None:intergenic | 45.0% |
| !! | AGACAGTCTAGCTCTCTTCA+TGG | + | chr4.3:2242784-2242803 | None:intergenic | 45.0% |
| !! | CCATCAGCTTCCTTTTGGTT+TGG | + | chr4.3:2244761-2244780 | None:intergenic | 45.0% |
| !! | CTTTCCTGCTTTTCCTACAG+AGG | + | chr4.3:2244323-2244342 | None:intergenic | 45.0% |
| !! | GACAGTCTAGCTCTCTTCAT+GGG | + | chr4.3:2242783-2242802 | None:intergenic | 45.0% |
| !! | GACCAAAGGTGTTGAAGTGA+TGG | + | chr4.3:2245803-2245822 | None:intergenic | 45.0% |
| !! | GACCATAGGTGTTGAAGTGA+TGG | + | chr4.3:2245770-2245789 | None:intergenic | 45.0% |
| !! | GATGGTGCTGATGTTCCAAA+AGG | - | chr4.3:2244854-2244873 | MS.gene015761:intron | 45.0% |
| !! | GCGTTCTAAAGTTGCCTCAA+CGG | + | chr4.3:2241045-2241064 | None:intergenic | 45.0% |
| !! | GTTGAAGTGATGGTGTTGCA+AGG | + | chr4.3:2245760-2245779 | None:intergenic | 45.0% |
| !! | GTTGAAGTGATGGTGTTGCA+TGG | + | chr4.3:2245760-2245779 | None:intergenic | 45.0% |
| !! | TTGAAGTGACGGTGTTGCAA+GGG | + | chr4.3:2245957-2245976 | None:intergenic | 45.0% |
| AACCCCCCGTTCATAGCATT+TGG | - | chr4.3:2245158-2245177 | MS.gene015761:CDS | 50.0% | |
| AACGATGGATCCCTGATGGA+CGG | + | chr4.3:2242493-2242512 | None:intergenic | 50.0% | |
| AAGCTTCCTGCAGTTGAGAG+TGG | - | chr4.3:2243345-2243364 | MS.gene015761:intron | 50.0% | |
| AAGTTGGGCCTCCAATGGTA+TGG | - | chr4.3:2241975-2241994 | MS.gene015761:intron | 50.0% | |
| ACAAGACTGCAAGGGACCAA+AGG | + | chr4.3:2245985-2246004 | None:intergenic | 50.0% | |
| AGCAATCCTGACAACTGGGT+AGG | + | chr4.3:2244439-2244458 | None:intergenic | 50.0% | |
| AGCTGATGGGGAGAAAGTTG+TGG | - | chr4.3:2244772-2244791 | MS.gene015761:intron | 50.0% | |
| ATCAGAAGTTGGGCCTCCAA+TGG | - | chr4.3:2241970-2241989 | MS.gene015761:intron | 50.0% | |
| ATGGCATTGCAAGGGACCAA+AGG | + | chr4.3:2245883-2245902 | None:intergenic | 50.0% | |
| CAACCACGTCCCTATAAGAG+TGG | - | chr4.3:2241941-2241960 | MS.gene015761:intron | 50.0% | |
| CAAGTATGTGACTGTGAGGC+TGG | - | chr4.3:2243243-2243262 | MS.gene015761:intron | 50.0% | |
| CACCATCACTTCAGCACCTA+TGG | - | chr4.3:2245732-2245751 | MS.gene015761:intron | 50.0% | |
| CATACAACCACAGCACCTGA+AGG | - | chr4.3:2243653-2243672 | MS.gene015761:intron | 50.0% | |
| CCTAAGACTGACCCCACTTT+GGG | + | chr4.3:2240339-2240358 | None:intergenic | 50.0% | |
| GCAGCCAATGCTGCTATAAC+TGG | - | chr4.3:2242400-2242419 | MS.gene015761:intron | 50.0% | |
| GCGCAACAACAAGTGCATAG+AGG | + | chr4.3:2240861-2240880 | None:intergenic | 50.0% | |
| GCTTCAGTCGTCGTAGCAAA+AGG | + | chr4.3:2243091-2243110 | None:intergenic | 50.0% | |
| GCTTCCTCTGTAGGAAAAGC+AGG | - | chr4.3:2244316-2244335 | MS.gene015761:intron | 50.0% | |
| GGGAAAAAGCGGGGTAAATG+TGG | + | chr4.3:2243869-2243888 | None:intergenic | 50.0% | |
| GGTAAACCTACCCAGTTGTC+AGG | - | chr4.3:2244430-2244449 | MS.gene015761:intron | 50.0% | |
| GTCCAAATGCTATGAACGGG+GGG | + | chr4.3:2245163-2245182 | None:intergenic | 50.0% | |
| TAGCTTCCACTCTCAACTGC+AGG | + | chr4.3:2243354-2243373 | None:intergenic | 50.0% | |
| TCATTGAGAACCAGTAGGGG+GGG | + | chr4.3:2243063-2243082 | None:intergenic | 50.0% | |
| TCCAAACGATGGATCCCTGA+TGG | + | chr4.3:2242497-2242516 | None:intergenic | 50.0% | |
| TCCATCAGGGATCCATCGTT+TGG | - | chr4.3:2242493-2242512 | MS.gene015761:CDS | 50.0% | |
| TGAAGGAAGTGAAGAGCGAC+AGG | - | chr4.3:2242330-2242349 | MS.gene015761:intron | 50.0% | |
| TGCCATCACTTCAACGCCTT+TGG | - | chr4.3:2245897-2245916 | MS.gene015761:CDS | 50.0% | |
| ! | AAGGTCCAACACGAGGTACT+GGG | + | chr4.3:2243497-2243516 | None:intergenic | 50.0% |
| ! | CACTCTAATCCCTTTGGTGC+AGG | - | chr4.3:2242962-2242981 | MS.gene015761:intron | 50.0% |
| ! | GCTCGCAATTTTCGGCCTAA+AGG | + | chr4.3:2241078-2241097 | None:intergenic | 50.0% |
| ! | GTGCTGATGTTCCAAAAGGG+AGG | - | chr4.3:2244858-2244877 | MS.gene015761:intron | 50.0% |
| ! | TCTCCCCATCAGCTTCCTTT+TGG | + | chr4.3:2244766-2244785 | None:intergenic | 50.0% |
| !! | AAAGATGAAGAGGGTGCTGC+AGG | + | chr4.3:2243465-2243484 | None:intergenic | 50.0% |
| !! | ACTGGAGCTATTGGTTCCTC+TGG | - | chr4.3:2242418-2242437 | MS.gene015761:intron | 50.0% |
| !! | ACTTGTTGTTGCGCCTTTGC+CGG | - | chr4.3:2240867-2240886 | MS.gene015761:intron | 50.0% |
| !! | ATGGTGTTGCAAGGGACCAT+AGG | + | chr4.3:2245751-2245770 | None:intergenic | 50.0% |
| !! | ATGGTGTTGCATGGGACCAA+AGG | + | chr4.3:2245817-2245836 | None:intergenic | 50.0% |
| !! | GACCAAAGGCGTTGAAGTGA+TGG | + | chr4.3:2245902-2245921 | None:intergenic | 50.0% |
| !! | GACCATAGGTGCTGAAGTGA+TGG | + | chr4.3:2245737-2245756 | None:intergenic | 50.0% |
| !! | GACCGAAGGTGTTGAAGTGA+TGG | + | chr4.3:2245836-2245855 | None:intergenic | 50.0% |
| !! | GTTGAAGTGACGGTGTTGCA+AGG | + | chr4.3:2245958-2245977 | None:intergenic | 50.0% |
| AAAGGGAGGCCAATGTCTCC+TGG | - | chr4.3:2244872-2244891 | MS.gene015761:intron | 55.0% | |
| ACTTTGGGTGCAGGAAGAGG+AGG | + | chr4.3:2240324-2240343 | None:intergenic | 55.0% | |
| ATGAGCCATCGACGCAGTTG+AGG | + | chr4.3:2244951-2244970 | None:intergenic | 55.0% | |
| CATTGAGAACCAGTAGGGGG+GGG | + | chr4.3:2243062-2243081 | None:intergenic | 55.0% | |
| CCCAAAGTGGGGTCAGTCTT+AGG | - | chr4.3:2240336-2240355 | MS.gene015761:CDS | 55.0% | |
| CCTCTTCCTGCACCCAAAGT+GGG | - | chr4.3:2240324-2240343 | MS.gene015761:CDS | 55.0% | |
| CTCTTCCTGCACCCAAAGTG+GGG | - | chr4.3:2240325-2240344 | MS.gene015761:CDS | 55.0% | |
| GAAGGTCCAACACGAGGTAC+TGG | + | chr4.3:2243498-2243517 | None:intergenic | 55.0% | |
| GAGTTTGCGATGGCCCATTC+TGG | - | chr4.3:2242915-2242934 | MS.gene015761:intron | 55.0% | |
| GCCTAAGACTGACCCCACTT+TGG | + | chr4.3:2240340-2240359 | None:intergenic | 55.0% | |
| GCGTCGGGGATATATTGCGA+TGG | - | chr4.3:2240963-2240982 | MS.gene015761:intron | 55.0% | |
| TCCTCTTCCTGCACCCAAAG+TGG | - | chr4.3:2240323-2240342 | MS.gene015761:CDS | 55.0% | |
| TGAGCCATCGACGCAGTTGA+GGG | + | chr4.3:2244950-2244969 | None:intergenic | 55.0% | |
| TGGCTGTCCGACACTCATAG+TGG | - | chr4.3:2242935-2242954 | MS.gene015761:intron | 55.0% | |
| ! | CAAAGCTCCTTCAGGTGCTG+TGG | + | chr4.3:2243663-2243682 | None:intergenic | 55.0% |
| ! | GCAGGAAGAGGAGGAAGTGT+CGG | + | chr4.3:2240315-2240334 | None:intergenic | 55.0% |
| !! | ACGGTGTTGCAAGGGACCAA+AGG | + | chr4.3:2245949-2245968 | None:intergenic | 55.0% |
| !! | ATGGTGTTGCATGGGACCGA+AGG | + | chr4.3:2245850-2245869 | None:intergenic | 55.0% |
| !! | GAGCGACAGGCTTTGTTCCA+TGG | - | chr4.3:2242343-2242362 | MS.gene015761:intron | 55.0% |
| !! | GAGTGTCGGACAGCCAGAAT+GGG | + | chr4.3:2242931-2242950 | None:intergenic | 55.0% |
| !! | GGAGACATTGGCCTCCCTTT+TGG | + | chr4.3:2244872-2244891 | None:intergenic | 55.0% |
| !! | TGAGTGTCGGACAGCCAGAA+TGG | + | chr4.3:2242932-2242951 | None:intergenic | 55.0% |
| ACTGACCCCACTTTGGGTGC+AGG | + | chr4.3:2240333-2240352 | None:intergenic | 60.0% | |
| ACTGAGGCAGCGCAACAGCA+AGG | - | chr4.3:2245667-2245686 | MS.gene015761:intron | 60.0% | |
| AGCCATCGACGCAGTTGAGG+GGG | + | chr4.3:2244948-2244967 | None:intergenic | 60.0% | |
| CCCACTTTGGGTGCAGGAAG+AGG | + | chr4.3:2240327-2240346 | None:intergenic | 60.0% | |
| CCTGTCCCAGTACCTCGTGT+TGG | - | chr4.3:2243489-2243508 | MS.gene015761:intron | 60.0% | |
| CTGTTGCGCTGCCTCAGTAC+TGG | + | chr4.3:2245665-2245684 | None:intergenic | 60.0% | |
| GAGCCATCGACGCAGTTGAG+GGG | + | chr4.3:2244949-2244968 | None:intergenic | 60.0% | |
| GCAGCGCAACAGCAAGGACT+GGG | - | chr4.3:2245673-2245692 | MS.gene015761:intron | 60.0% | |
| GGAACTCTGGCCGTCCATCA+GGG | - | chr4.3:2242480-2242499 | MS.gene015761:intron | 60.0% | |
| GGCAAGACGAGAAGCCGTTG+AGG | - | chr4.3:2241028-2241047 | MS.gene015761:intron | 60.0% | |
| ! | TCCGGCAGAGGTGCAGTTAC+CGG | + | chr4.3:2240276-2240295 | None:intergenic | 60.0% |
| !! | CAACGCTTTTGGTGGCACGC+CGG | - | chr4.3:2240254-2240273 | MS.gene015761:CDS | 60.0% |
| !! | CCAACACGAGGTACTGGGAC+AGG | + | chr4.3:2243492-2243511 | None:intergenic | 60.0% |
| !! | GAAGTGTCGGCGGTGGTTGT+GGG | + | chr4.3:2240302-2240321 | None:intergenic | 60.0% |
| !! | GGAAGAGGAGGAAGTGTCGG+CGG | + | chr4.3:2240312-2240331 | None:intergenic | 60.0% |
| AGAACCAGTAGGGGGGGGCT+AGG | + | chr4.3:2243057-2243076 | None:intergenic | 65.0% | |
| CGGAACTCTGGCCGTCCATC+AGG | - | chr4.3:2242479-2242498 | MS.gene015761:intron | 65.0% | |
| GCCGGTAACTGCACCTCTGC+CGG | - | chr4.3:2240272-2240291 | MS.gene015761:CDS | 65.0% | |
| GGCAGCGCAACAGCAAGGAC+TGG | - | chr4.3:2245672-2245691 | MS.gene015761:intron | 65.0% | |
| GGCGGTGGTTGTGGGTGTTC+CGG | + | chr4.3:2240294-2240313 | None:intergenic | 65.0% | |
| GGTTGTGGGTGTTCCGGCAG+AGG | + | chr4.3:2240288-2240307 | None:intergenic | 65.0% | |
| TGCCCCCTCAACTGCGTCGA+TGG | - | chr4.3:2244943-2244962 | MS.gene015761:intron | 65.0% | |
| ! | GGTGCTGCAGGACCTCTGAC+AGG | + | chr4.3:2243453-2243472 | None:intergenic | 65.0% |
| !! | AGAGGAGGAAGTGTCGGCGG+TGG | + | chr4.3:2240309-2240328 | None:intergenic | 65.0% |
| !! | GGAAGTGTCGGCGGTGGTTG+TGG | + | chr4.3:2240303-2240322 | None:intergenic | 65.0% |
| GAAGCCTAGCCCCCCCCTAC+TGG | - | chr4.3:2243050-2243069 | MS.gene015761:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 2240171 | 2246044 | 2240171 | ID=MS.gene015761 |
| chr4.3 | mRNA | 2240171 | 2246044 | 2240171 | ID=MS.gene015761.t1;Parent=MS.gene015761 |
| chr4.3 | exon | 2245869 | 2246044 | 2245869 | ID=MS.gene015761.t1.exon1;Parent=MS.gene015761.t1 |
| chr4.3 | CDS | 2245869 | 2246044 | 2245869 | ID=cds.MS.gene015761.t1;Parent=MS.gene015761.t1 |
| chr4.3 | exon | 2245369 | 2245476 | 2245369 | ID=MS.gene015761.t1.exon2;Parent=MS.gene015761.t1 |
| chr4.3 | CDS | 2245369 | 2245476 | 2245369 | ID=cds.MS.gene015761.t1;Parent=MS.gene015761.t1 |
| chr4.3 | exon | 2245091 | 2245268 | 2245091 | ID=MS.gene015761.t1.exon3;Parent=MS.gene015761.t1 |
| chr4.3 | CDS | 2245091 | 2245268 | 2245091 | ID=cds.MS.gene015761.t1;Parent=MS.gene015761.t1 |
| chr4.3 | exon | 2243684 | 2244031 | 2243684 | ID=MS.gene015761.t1.exon4;Parent=MS.gene015761.t1 |
| chr4.3 | CDS | 2243684 | 2244031 | 2243684 | ID=cds.MS.gene015761.t1;Parent=MS.gene015761.t1 |
| chr4.3 | exon | 2242668 | 2242771 | 2242668 | ID=MS.gene015761.t1.exon5;Parent=MS.gene015761.t1 |
| chr4.3 | CDS | 2242668 | 2242771 | 2242668 | ID=cds.MS.gene015761.t1;Parent=MS.gene015761.t1 |
| chr4.3 | exon | 2242486 | 2242580 | 2242486 | ID=MS.gene015761.t1.exon6;Parent=MS.gene015761.t1 |
| chr4.3 | CDS | 2242486 | 2242580 | 2242486 | ID=cds.MS.gene015761.t1;Parent=MS.gene015761.t1 |
| chr4.3 | exon | 2241115 | 2241534 | 2241115 | ID=MS.gene015761.t1.exon7;Parent=MS.gene015761.t1 |
| chr4.3 | CDS | 2241115 | 2241534 | 2241115 | ID=cds.MS.gene015761.t1;Parent=MS.gene015761.t1 |
| chr4.3 | exon | 2240171 | 2240628 | 2240171 | ID=MS.gene015761.t1.exon8;Parent=MS.gene015761.t1 |
| chr4.3 | CDS | 2240171 | 2240628 | 2240171 | ID=cds.MS.gene015761.t1;Parent=MS.gene015761.t1 |
| Gene Sequence |
| Protein sequence |
