Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049110.t1 | XP_003630778.3 | 94.2 | 521 | 30 | 0 | 1 | 521 | 1 | 521 | 3.80E-280 | 973.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049110.t1 | Q9SZD1 | 58.5 | 487 | 160 | 7 | 35 | 505 | 103 | 563 | 2.3e-145 | 517.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049110.t1 | A0A396GR76 | 94.2 | 521 | 30 | 0 | 1 | 521 | 1 | 521 | 2.7e-280 | 973.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene049110.t1 | TF | CPP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene049110 | MS.gene04747 | PPI |
| MS.gene049110 | MS.gene042998 | PPI |
| MS.gene61350 | MS.gene049110 | PPI |
| MS.gene059637 | MS.gene049110 | PPI |
| MS.gene049110 | MS.gene69135 | PPI |
| MS.gene049110 | MS.gene05904 | PPI |
| MS.gene015761 | MS.gene049110 | PPI |
| MS.gene69136 | MS.gene049110 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049110.t1 | MTR_8g103320 | 97.479 | 476 | 12 | 0 | 1 | 476 | 1 | 476 | 0.0 | 966 |
| MS.gene049110.t1 | MTR_6g087590 | 65.189 | 609 | 149 | 11 | 1 | 560 | 1 | 595 | 0.0 | 737 |
| MS.gene049110.t1 | MTR_3g110122 | 42.593 | 486 | 246 | 13 | 36 | 512 | 101 | 562 | 7.50e-109 | 340 |
| MS.gene049110.t1 | MTR_5g006530 | 41.447 | 152 | 83 | 2 | 61 | 211 | 247 | 393 | 3.33e-29 | 122 |
| MS.gene049110.t1 | MTR_1g012020 | 40.462 | 173 | 95 | 5 | 50 | 218 | 469 | 637 | 4.57e-29 | 123 |
| MS.gene049110.t1 | MTR_5g006530 | 41.447 | 152 | 83 | 2 | 61 | 211 | 471 | 617 | 6.46e-29 | 122 |
| MS.gene049110.t1 | MTR_1g103230 | 33.898 | 118 | 77 | 1 | 95 | 211 | 450 | 567 | 2.25e-14 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049110.t1 | AT4G29000 | 64.977 | 434 | 139 | 7 | 61 | 489 | 109 | 534 | 0.0 | 551 |
| MS.gene049110.t1 | AT2G20110 | 49.740 | 577 | 199 | 16 | 1 | 528 | 1 | 535 | 5.73e-174 | 506 |
| MS.gene049110.t1 | AT2G20110 | 50.536 | 560 | 183 | 15 | 1 | 508 | 1 | 518 | 1.19e-173 | 504 |
| MS.gene049110.t1 | AT2G20110 | 49.144 | 584 | 199 | 17 | 1 | 528 | 1 | 542 | 6.24e-171 | 499 |
| MS.gene049110.t1 | AT5G25790 | 42.534 | 442 | 199 | 11 | 47 | 476 | 50 | 448 | 9.77e-104 | 322 |
| MS.gene049110.t1 | AT5G25790 | 42.534 | 442 | 199 | 11 | 47 | 476 | 50 | 448 | 3.32e-103 | 322 |
| MS.gene049110.t1 | AT5G25790 | 42.152 | 446 | 191 | 13 | 47 | 476 | 50 | 444 | 3.71e-101 | 315 |
| MS.gene049110.t1 | AT3G16160 | 31.291 | 457 | 193 | 14 | 24 | 470 | 17 | 362 | 1.84e-41 | 154 |
| MS.gene049110.t1 | AT3G22760 | 44.172 | 163 | 82 | 5 | 61 | 219 | 184 | 341 | 3.34e-34 | 136 |
| MS.gene049110.t1 | AT3G22760 | 44.172 | 163 | 82 | 5 | 61 | 219 | 307 | 464 | 5.40e-34 | 137 |
| MS.gene049110.t1 | AT4G14770 | 44.776 | 134 | 67 | 3 | 83 | 212 | 375 | 505 | 5.99e-32 | 132 |
| MS.gene049110.t1 | AT4G14770 | 44.776 | 134 | 67 | 3 | 83 | 212 | 356 | 486 | 6.82e-32 | 131 |
| MS.gene049110.t1 | AT4G14770 | 44.776 | 134 | 67 | 3 | 83 | 212 | 355 | 485 | 6.85e-32 | 131 |
| MS.gene049110.t1 | AT3G22780 | 44.030 | 134 | 68 | 3 | 83 | 212 | 401 | 531 | 5.38e-31 | 129 |
| MS.gene049110.t1 | AT3G04850 | 45.736 | 129 | 69 | 1 | 83 | 210 | 453 | 581 | 3.31e-30 | 126 |
Find 157 sgRNAs with CRISPR-Local
Find 383 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAGTCTTGTTTCAGAAAA+TGG | 0.136929 | 4.1:-2796521 | MS.gene049110:CDS |
| GACTTTGATTTAGGAGATTC+TGG | 0.202009 | 4.1:+2801353 | None:intergenic |
| TTGGGTCTTGACTTTGATTT+AGG | 0.219084 | 4.1:+2801344 | None:intergenic |
| TCTTAATAGGGTTATCACTA+TGG | 0.229357 | 4.1:-2797416 | MS.gene049110:CDS |
| GGAGACATTGGCCTCCCTTT+TGG | 0.278244 | 4.1:+2797613 | None:intergenic |
| TCTCCCCATCAGCTTCCTTT+TGG | 0.283654 | 4.1:+2797719 | None:intergenic |
| TTGAGTCTCTAACTCACTTC+TGG | 0.285807 | 4.1:+2796874 | None:intergenic |
| GGAAGTGTCGGCGGTGGTTG+TGG | 0.289843 | 4.1:+2801796 | None:intergenic |
| CAGCTCGATTTCAACGCTTT+TGG | 0.295923 | 4.1:-2801853 | MS.gene049110:CDS |
| TGCTTTGCCGACGTTATTAC+AGG | 0.297076 | 4.1:+2796781 | None:intergenic |
| ACATCTTCACAATTGCCTTA+TGG | 0.308433 | 4.1:-2797502 | MS.gene049110:CDS |
| GCAGCCAATGCTGCTATAAC+TGG | 0.312657 | 4.1:-2800045 | MS.gene049110:CDS |
| ATCACTATGGGCGAAATAAA+TGG | 0.314147 | 4.1:-2797403 | MS.gene049110:intron |
| GAAGTGTCGGCGGTGGTTGT+GGG | 0.336832 | 4.1:+2801797 | None:intergenic |
| CGGAACTCTGGCCGTCCATC+AGG | 0.341120 | 4.1:-2799966 | MS.gene049110:CDS |
| TATATCTATTGTTCGACCTT+CGG | 0.358406 | 4.1:+2796488 | None:intergenic |
| GCAGTCTTGTTTCAGAAAAT+GGG | 0.359660 | 4.1:-2796520 | MS.gene049110:CDS |
| GGCGGTGGTTGTGGGTGTTC+CGG | 0.362076 | 4.1:+2801805 | None:intergenic |
| TGCCATCACTTCAACGCCTT+TGG | 0.368657 | 4.1:-2796585 | MS.gene049110:CDS |
| CGTGTTGGACCTTCAACATT+AGG | 0.374824 | 4.1:-2798942 | MS.gene049110:CDS |
| GCTGCTATAACTGGAGCTAT+TGG | 0.378616 | 4.1:-2800036 | MS.gene049110:CDS |
| TGGAGATCAAAACAACAATA+TGG | 0.382902 | 4.1:-2800082 | MS.gene049110:CDS |
| CACCATCACTTCAACACCTT+TGG | 0.384125 | 4.1:-2796618 | MS.gene049110:CDS |
| CACCATCACTTCAACACCTT+TGG | 0.384125 | 4.1:-2796651 | MS.gene049110:CDS |
| CACCATCACTTCAACACCTT+TGG | 0.384125 | 4.1:-2796684 | MS.gene049110:CDS |
| TCCGGCAGAGGTGCAGTTAC+CGG | 0.392618 | 4.1:+2801823 | None:intergenic |
| AAACAGAGCAAAGCTCCTTC+AGG | 0.392877 | 4.1:+2798778 | None:intergenic |
| TCTTTCGTTCCTTGTCCATA+AGG | 0.397871 | 4.1:+2797487 | None:intergenic |
| TTTCAGTGCGATTGATGATT+GGG | 0.398288 | 4.1:+2796846 | None:intergenic |
| CACATCAATGCTAAAGTTCC+AGG | 0.399973 | 4.1:+2797592 | None:intergenic |
| CTGCCTAGCAAGCTTCTTAA+CGG | 0.406846 | 4.1:+2801873 | None:intergenic |
| GAAGGTCCAACACGAGGTAC+TGG | 0.411988 | 4.1:+2798951 | None:intergenic |
| AACGCAATCCAAATGCCTTT+AGG | 0.412558 | 4.1:-2801036 | MS.gene049110:CDS |
| ACTGGAGCTATTGGTTCCTC+TGG | 0.415396 | 4.1:-2800027 | MS.gene049110:CDS |
| CACCATCACTTCAGCACCTA+TGG | 0.418273 | 4.1:-2796750 | MS.gene049110:CDS |
| TCCATCAGGGATCCATCGTT+TGG | 0.418364 | 4.1:-2799952 | MS.gene049110:CDS |
| CCTCTTCCTGCACCCAAAGT+GGG | 0.422177 | 4.1:-2801772 | MS.gene049110:CDS |
| AAAGAAAAGGTTCGGAACTC+TGG | 0.425606 | 4.1:-2799978 | MS.gene049110:CDS |
| CGTCACTTCAACAACACCTT+TGG | 0.427483 | 4.1:-2796549 | MS.gene049110:CDS |
| TTTGAAGGGCCTAATGTTGA+AGG | 0.430598 | 4.1:+2798933 | None:intergenic |
| GCCCTTCAAAATTTATGTAC+AGG | 0.435578 | 4.1:-2798920 | MS.gene049110:intron |
| CTTAATAGGGTTATCACTAT+GGG | 0.444084 | 4.1:-2797415 | MS.gene049110:CDS |
| CAGAACAAAGAATGTTGGCT+TGG | 0.445420 | 4.1:+2800169 | None:intergenic |
| CCTAAGACTGACCCCACTTT+GGG | 0.446599 | 4.1:+2801760 | None:intergenic |
| GCCTAAGACTGACCCCACTT+TGG | 0.446742 | 4.1:+2801759 | None:intergenic |
| AACATCAGCACCATCTGAAC+TGG | 0.452271 | 4.1:+2797636 | None:intergenic |
| AAAGGGAGGCCAATGTCTCC+TGG | 0.459213 | 4.1:-2797610 | MS.gene049110:CDS |
| GGCAGCGCAACAGCAAGGAC+TGG | 0.462015 | 4.1:-2796810 | MS.gene049110:CDS |
| GAGCGACAGGCTTTGTTCCA+TGG | 0.463378 | 4.1:-2800102 | MS.gene049110:CDS |
| GCCGGTAACTGCACCTCTGC+CGG | 0.463775 | 4.1:-2801824 | MS.gene049110:CDS |
| CTGTTGCGCTGCCTCAGTAC+TGG | 0.464401 | 4.1:+2796820 | None:intergenic |
| CCCACTTTGGGTGCAGGAAG+AGG | 0.467373 | 4.1:+2801772 | None:intergenic |
| TGGTAATTGCTCTTGATTTG+AGG | 0.468628 | 4.1:+2797744 | None:intergenic |
| TGAGCCATCGACGCAGTTGA+GGG | 0.478336 | 4.1:+2797535 | None:intergenic |
| GCAGCGCAACAGCAAGGACT+GGG | 0.486221 | 4.1:-2796809 | MS.gene049110:CDS |
| AGCTCCAGTTATAGCAGCAT+TGG | 0.488511 | 4.1:+2800041 | None:intergenic |
| GATGGTGCTGATGTTCCAAA+AGG | 0.490293 | 4.1:-2797628 | MS.gene049110:CDS |
| GTTTGGAAAGCTAGGACAAC+AGG | 0.490764 | 4.1:-2799935 | MS.gene049110:intron |
| AAAGATGAAGAGGGTGCTGC+AGG | 0.491726 | 4.1:+2798984 | None:intergenic |
| CACCATCACTTCAACACCTA+TGG | 0.496104 | 4.1:-2796717 | MS.gene049110:CDS |
| GGTTGTGGGTGTTCCGGCAG+AGG | 0.497560 | 4.1:+2801811 | None:intergenic |
| TCCTCTTCCTGCACCCAAAG+TGG | 0.499712 | 4.1:-2801773 | MS.gene049110:CDS |
| CGATCGAATGGGTGAAGGTG+AGG | 0.502201 | 4.1:-2801932 | None:intergenic |
| TTCTGAAAACTGTAAATGCA+TGG | 0.504558 | 4.1:-2800151 | MS.gene049110:CDS |
| ACTGACCCCACTTTGGGTGC+AGG | 0.507298 | 4.1:+2801766 | None:intergenic |
| ATATAAATGTAGGAGGAGAC+TGG | 0.511871 | 4.1:-2800273 | MS.gene049110:intron |
| TGAAGGAAGTGAAGAGCGAC+AGG | 0.515256 | 4.1:-2800115 | MS.gene049110:CDS |
| GACTGGGGAAGTTAAAGTAT+TGG | 0.517867 | 4.1:-2800256 | MS.gene049110:CDS |
| GACCAAAGGCGTTGAAGTGA+TGG | 0.518047 | 4.1:+2796583 | None:intergenic |
| ATGAGCCATCGACGCAGTTG+AGG | 0.519656 | 4.1:+2797534 | None:intergenic |
| CAATATGGTGTATCTTCAGC+AGG | 0.520230 | 4.1:-2800067 | MS.gene049110:CDS |
| CAGTCTTGTTTCAGAAAATG+GGG | 0.524569 | 4.1:-2796519 | MS.gene049110:CDS |
| GATCGAATGGGTGAAGGTGA+GGG | 0.528000 | 4.1:-2801931 | None:intergenic |
| AAGTGAGTTAGAGACTCAAA+AGG | 0.529599 | 4.1:-2796870 | MS.gene049110:CDS |
| AGAGCAATTACCAAACCAAA+AGG | 0.531316 | 4.1:-2797734 | MS.gene049110:CDS |
| GCGTTCTAAAGTTGCCTCAA+CGG | 0.532916 | 4.1:+2801054 | None:intergenic |
| GGTGCTGCAGGACCTCTGAC+AGG | 0.533479 | 4.1:+2798996 | None:intergenic |
| GCAGGAAGAGGAGGAAGTGT+CGG | 0.537059 | 4.1:+2801784 | None:intergenic |
| CTCTTCCTGCACCCAAAGTG+GGG | 0.540427 | 4.1:-2801771 | MS.gene049110:intron |
| GGAACTCTGGCCGTCCATCA+GGG | 0.541188 | 4.1:-2799965 | MS.gene049110:CDS |
| AGATCTATGCAGAGCAAGAG+AGG | 0.541580 | 4.1:-2797465 | MS.gene049110:CDS |
| GTTGAAGTGATGGCATTGCA+AGG | 0.542129 | 4.1:+2796593 | None:intergenic |
| TTGAAGTGATGGTGTTGCAT+GGG | 0.553400 | 4.1:+2796627 | None:intergenic |
| TTGAAGTGATGGTGTTGCAT+GGG | 0.553400 | 4.1:+2796660 | None:intergenic |
| GCTAAAGTTCCAGGAGACAT+TGG | 0.554665 | 4.1:+2797601 | None:intergenic |
| CCTGTCCCAGTACCTCGTGT+TGG | 0.556568 | 4.1:-2798957 | MS.gene049110:CDS |
| AAAATTGCGAGCAGTCCTCA+TGG | 0.561710 | 4.1:-2801010 | MS.gene049110:CDS |
| TGGGGCGATCGAATGGGTGA+AGG | 0.561905 | 4.1:-2801937 | None:intergenic |
| TAACAATGTTGACAATGAAG+CGG | 0.562048 | 4.1:-2801089 | MS.gene049110:CDS |
| CCTGAAAATTCCAGTTCAGA+TGG | 0.562427 | 4.1:-2797646 | MS.gene049110:CDS |
| TATAAATGTAGGAGGAGACT+GGG | 0.563902 | 4.1:-2800272 | MS.gene049110:intron |
| GATCCATCGTTTGGAAAGCT+AGG | 0.564234 | 4.1:-2799943 | MS.gene049110:CDS |
| CCAACACGAGGTACTGGGAC+AGG | 0.566645 | 4.1:+2798957 | None:intergenic |
| CAAACCAAAAGGAAGCTGAT+GGG | 0.567376 | 4.1:-2797723 | MS.gene049110:CDS |
| ATTCCGTTAAGAAGCTTGCT+AGG | 0.570445 | 4.1:-2801876 | MS.gene049110:CDS |
| CCAAACCAAAAGGAAGCTGA+TGG | 0.575383 | 4.1:-2797724 | MS.gene049110:CDS |
| CAAAGCTCCTTCAGGTGCTG+TGG | 0.576488 | 4.1:+2798786 | None:intergenic |
| AGAGGAGGAAGTGTCGGCGG+TGG | 0.576611 | 4.1:+2801790 | None:intergenic |
| GTTGAAGTGATGGTGTTGCA+TGG | 0.579282 | 4.1:+2796626 | None:intergenic |
| GTTGAAGTGATGGTGTTGCA+TGG | 0.579282 | 4.1:+2796659 | None:intergenic |
| TCACAATTGCCTTATGGACA+AGG | 0.579807 | 4.1:-2797496 | MS.gene049110:CDS |
| TTTAGTGCTAGTATCTGGAC+AGG | 0.580606 | 4.1:-2798757 | MS.gene049110:CDS |
| ACGGTGTTGCAAGGGACCAA+AGG | 0.581749 | 4.1:+2796569 | None:intergenic |
| AATAACGTCGGCAAAGCAGT+TGG | 0.582782 | 4.1:-2796776 | MS.gene049110:CDS |
| TCCAAACGATGGATCCCTGA+TGG | 0.585261 | 4.1:+2799951 | None:intergenic |
| TAGATAAGCACACAGAAGAT+CGG | 0.590669 | 4.1:-2797786 | MS.gene049110:CDS |
| AGCCATCGACGCAGTTGAGG+GGG | 0.590783 | 4.1:+2797537 | None:intergenic |
| GTTGAAGTGACGGTGTTGCA+AGG | 0.590921 | 4.1:+2796560 | None:intergenic |
| GACAGGAGACAAAGATGAAG+AGG | 0.594341 | 4.1:+2798974 | None:intergenic |
| AAGGTCCAACACGAGGTACT+GGG | 0.595130 | 4.1:+2798952 | None:intergenic |
| AACGATGGATCCCTGATGGA+CGG | 0.596545 | 4.1:+2799955 | None:intergenic |
| ACAAGACTGCAAGGGACCAA+AGG | 0.597556 | 4.1:+2796533 | None:intergenic |
| GACCATAGGTGCTGAAGTGA+TGG | 0.600765 | 4.1:+2796748 | None:intergenic |
| GACCATAGGTGTTGAAGTGA+TGG | 0.600889 | 4.1:+2796715 | None:intergenic |
| ATGGTGCTGATGTTCCAAAA+GGG | 0.600938 | 4.1:-2797627 | MS.gene049110:CDS |
| GAGCCATCGACGCAGTTGAG+GGG | 0.602668 | 4.1:+2797536 | None:intergenic |
| ATGGTGTTGCAAGGGACCAT+AGG | 0.603345 | 4.1:+2796701 | None:intergenic |
| ATGGTGTTGCAAGGGACCAT+AGG | 0.603345 | 4.1:+2796734 | None:intergenic |
| TGTCCTAGCTTTCCAAACGA+TGG | 0.604497 | 4.1:+2799940 | None:intergenic |
| GACCAAAGGTGTTGAAGTGA+TGG | 0.604817 | 4.1:+2796616 | None:intergenic |
| AAACCAAAAGGAAGCTGATG+GGG | 0.605517 | 4.1:-2797722 | MS.gene049110:CDS |
| ATGGCATTGCAAGGGACCAA+AGG | 0.608714 | 4.1:+2796602 | None:intergenic |
| AGTATTGGTAAAGCACAACA+AGG | 0.610516 | 4.1:-2800241 | MS.gene049110:CDS |
| AACATTCACAGTACTTCTTG+AGG | 0.610779 | 4.1:+2800193 | None:intergenic |
| TTTGCCGACGTTATTACAGG+TGG | 0.614550 | 4.1:+2796784 | None:intergenic |
| TCATGGAACACGTGATAACA+AGG | 0.615546 | 4.1:-2800993 | MS.gene049110:intron |
| TTGAAGTGACGGTGTTGCAA+GGG | 0.618089 | 4.1:+2796561 | None:intergenic |
| GTATTGGTAAAGCACAACAA+GGG | 0.619872 | 4.1:-2800240 | MS.gene049110:CDS |
| ACTTTGGGTGCAGGAAGAGG+AGG | 0.619897 | 4.1:+2801775 | None:intergenic |
| AAATGGGGAAATTAAGCCGA+AGG | 0.620465 | 4.1:-2796504 | MS.gene049110:CDS |
| GACCAAAGGTGTTGAAGTGA+TGG | 0.620830 | 4.1:+2796649 | None:intergenic |
| GACCAAAGGTGTTGAAGTGA+TGG | 0.620830 | 4.1:+2796682 | None:intergenic |
| GTTGAAGTGATGGTGTTGCA+AGG | 0.625625 | 4.1:+2796692 | None:intergenic |
| GTTGAAGTGATGGTGTTGCA+AGG | 0.625625 | 4.1:+2796725 | None:intergenic |
| GCGTCGGGGATATATTGCGA+TGG | 0.627790 | 4.1:-2801133 | MS.gene049110:CDS |
| TTGAAGTGATGGTGTTGCAA+GGG | 0.633210 | 4.1:+2796693 | None:intergenic |
| TTGAAGTGATGGTGTTGCAA+GGG | 0.633210 | 4.1:+2796726 | None:intergenic |
| ACTGAGGCAGCGCAACAGCA+AGG | 0.636738 | 4.1:-2796815 | MS.gene049110:CDS |
| ATGGTGTTGCATGGGACCAA+AGG | 0.637170 | 4.1:+2796635 | None:intergenic |
| ATGGTGTTGCATGGGACCAA+AGG | 0.637170 | 4.1:+2796668 | None:intergenic |
| GGCAAGACGAGAAGCCGTTG+AGG | 0.638829 | 4.1:-2801068 | MS.gene049110:CDS |
| TTGAAGTGATGGCATTGCAA+GGG | 0.640906 | 4.1:+2796594 | None:intergenic |
| CAAAGGTGTTGTTGAAGTGA+CGG | 0.642763 | 4.1:+2796550 | None:intergenic |
| CATACAACCACAGCACCTGA+AGG | 0.646661 | 4.1:-2798793 | MS.gene049110:CDS |
| ACAGGAGACAAAGATGAAGA+GGG | 0.650680 | 4.1:+2798975 | None:intergenic |
| GGAAGAGGAGGAAGTGTCGG+CGG | 0.650685 | 4.1:+2801787 | None:intergenic |
| TATCAGGCAAATCCTGTCAG+AGG | 0.651141 | 4.1:-2799008 | MS.gene049110:intron |
| TATTGGTAAAGCACAACAAG+GGG | 0.652902 | 4.1:-2800239 | MS.gene049110:CDS |
| GTGCTGATGTTCCAAAAGGG+AGG | 0.653307 | 4.1:-2797624 | MS.gene049110:CDS |
| AGCTGATGGGGAGAAAGTTG+TGG | 0.668913 | 4.1:-2797710 | MS.gene049110:CDS |
| TTGTTATCACGTGTTCCATG+AGG | 0.679705 | 4.1:+2800995 | None:intergenic |
| TTTCTGAAACAAGACTGCAA+GGG | 0.692177 | 4.1:+2796525 | None:intergenic |
| GGATCCACCTGTAATAACGT+CGG | 0.698709 | 4.1:-2796788 | MS.gene049110:CDS |
| CACTGAAAATACCAGTACTG+AGG | 0.701584 | 4.1:-2796831 | MS.gene049110:CDS |
| AATGTTGAAGGTCCAACACG+AGG | 0.707406 | 4.1:+2798945 | None:intergenic |
| TGGTGGTGATGAATAACCAG+AGG | 0.718034 | 4.1:+2800011 | None:intergenic |
| ATAAATGTAGGAGGAGACTG+GGG | 0.722595 | 4.1:-2800271 | MS.gene049110:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAAAAAATTAATATATGT+GGG | + | chr4.1:2797735-2797754 | None:intergenic | 10.0% |
| !! | AAAAGGAAAAAATGTAAATA+AGG | + | chr4.1:2797808-2797827 | None:intergenic | 15.0% |
| !! | AAGTAAAAAAAAATTAAAGC+CGG | - | chr4.1:2798028-2798047 | MS.gene049110:intron | 15.0% |
| !! | ACAAAAAATTAATATATGTG+GGG | + | chr4.1:2797734-2797753 | None:intergenic | 15.0% |
| !! | GAACAAAAAATTAATATATG+TGG | + | chr4.1:2797736-2797755 | None:intergenic | 15.0% |
| !! | TCTTATTATAATTGAATGAA+TGG | - | chr4.1:2799184-2799203 | MS.gene049110:intron | 15.0% |
| !!! | AATTACTTCATTTTAAATTG+TGG | + | chr4.1:2797876-2797895 | None:intergenic | 15.0% |
| !!! | ACTGATTATTTTTTGAAAAT+TGG | + | chr4.1:2801175-2801194 | None:intergenic | 15.0% |
| !!! | ATATTTTTTTTTACTCCTAA+TGG | + | chr4.1:2798628-2798647 | None:intergenic | 15.0% |
| !!! | ATTACTTCATTTTAAATTGT+GGG | + | chr4.1:2797875-2797894 | None:intergenic | 15.0% |
| !!! | CAATTTAAAATGAAGTAATT+CGG | - | chr4.1:2797876-2797895 | MS.gene049110:intron | 15.0% |
| !!! | TATTTTTTTTTACTCCTAAT+GGG | + | chr4.1:2798627-2798646 | None:intergenic | 15.0% |
| !!! | TCAAAATCAAAATATGTTTT+AGG | + | chr4.1:2800312-2800331 | None:intergenic | 15.0% |
| !!! | TCAAATAAAGTTGATTTATT+TGG | - | chr4.1:2797605-2797624 | MS.gene049110:CDS | 15.0% |
| !!! | TGTTTTATATGAAGAAAATA+TGG | + | chr4.1:2799150-2799169 | None:intergenic | 15.0% |
| !!! | TTTTTATTCTTATGTTTCTA+TGG | - | chr4.1:2798116-2798135 | MS.gene049110:intron | 15.0% |
| !! | AAAAAATTAATATATGTGGG+GGG | + | chr4.1:2797732-2797751 | None:intergenic | 20.0% |
| !! | AAAATGCATCAAACAAAATT+TGG | + | chr4.1:2797632-2797651 | None:intergenic | 20.0% |
| !! | AAATTGAGATTCTTGTTAAT+AGG | - | chr4.1:2796909-2796928 | MS.gene049110:intron | 20.0% |
| !! | AATTAGTGTTTATTTGATTC+AGG | - | chr4.1:2797039-2797058 | MS.gene049110:intron | 20.0% |
| !! | AATTGAGATTCTTGTTAATA+GGG | - | chr4.1:2796910-2796929 | MS.gene049110:intron | 20.0% |
| !! | ATTAAACATGAGTTTGATAT+TGG | + | chr4.1:2800589-2800608 | None:intergenic | 20.0% |
| !! | CAAAAAATTAATATATGTGG+GGG | + | chr4.1:2797733-2797752 | None:intergenic | 20.0% |
| !! | TAATTAAGCACTTCAAAAAA+AGG | + | chr4.1:2797024-2797043 | None:intergenic | 20.0% |
| !! | TGAAATTAGGAAAAGAAATT+AGG | + | chr4.1:2801502-2801521 | None:intergenic | 20.0% |
| !!! | AAAATTTCTTGAGATTTGTT+TGG | + | chr4.1:2799867-2799886 | None:intergenic | 20.0% |
| !!! | AACATATTTTGATTTTGAAG+TGG | - | chr4.1:2800314-2800333 | MS.gene049110:intron | 20.0% |
| !!! | AATTCAGAGATTTTCTTAAT+AGG | - | chr4.1:2800989-2801008 | MS.gene049110:intron | 20.0% |
| !!! | ATTCAGAGATTTTCTTAATA+GGG | - | chr4.1:2800990-2801009 | MS.gene049110:intron | 20.0% |
| !!! | ATTTTTTTTTACTCCTAATG+GGG | + | chr4.1:2798626-2798645 | None:intergenic | 20.0% |
| !!! | GATTTGCTTATATTTTGTTA+CGG | + | chr4.1:2797581-2797600 | None:intergenic | 20.0% |
| !!! | GCTTATCTATTAAATTTTTC+TGG | + | chr4.1:2800621-2800640 | None:intergenic | 20.0% |
| !!! | GGTTTTATGAAATTTTTGTA+AGG | + | chr4.1:2801078-2801097 | None:intergenic | 20.0% |
| !!! | TATTTTTTTTCATGCTTATC+AGG | - | chr4.1:2799394-2799413 | MS.gene049110:intron | 20.0% |
| !!! | TGTATTCTTTTGAAGTTTTT+GGG | - | chr4.1:2800514-2800533 | MS.gene049110:intron | 20.0% |
| ! | AAAAGGTTGTATTTACCATT+TGG | + | chr4.1:2800217-2800236 | None:intergenic | 25.0% |
| ! | AATAAATACACTACAGAAGT+TGG | + | chr4.1:2801389-2801408 | None:intergenic | 25.0% |
| ! | AATAATTCTGAACCTTACTT+TGG | + | chr4.1:2800077-2800096 | None:intergenic | 25.0% |
| ! | AATGCATCTCTCAATTTAAT+TGG | + | chr4.1:2798653-2798672 | None:intergenic | 25.0% |
| ! | AATTAGAATAGCATTTCCTT+GGG | - | chr4.1:2798975-2798994 | MS.gene049110:CDS | 25.0% |
| ! | ATGCATCTCTCAATTTAATT+GGG | + | chr4.1:2798652-2798671 | None:intergenic | 25.0% |
| ! | ATGGACTTCAATATAAATGT+AGG | - | chr4.1:2798135-2798154 | MS.gene049110:intron | 25.0% |
| ! | CAATTGAATAGAATAATCGA+AGG | + | chr4.1:2800546-2800565 | None:intergenic | 25.0% |
| ! | CTTCGATTATTCTATTCAAT+TGG | - | chr4.1:2800544-2800563 | MS.gene049110:intron | 25.0% |
| ! | TTCAAAATTTATGTACAGGT+AGG | - | chr4.1:2799502-2799521 | MS.gene049110:intron | 25.0% |
| ! | TTCTTCATATAAAACAGTGT+CGG | - | chr4.1:2799154-2799173 | MS.gene049110:intron | 25.0% |
| ! | TTGAAGTGGAATTAATTCTA+TGG | - | chr4.1:2800328-2800347 | MS.gene049110:intron | 25.0% |
| ! | TTTACAAGTATCTTAACAAC+AGG | + | chr4.1:2797993-2798012 | None:intergenic | 25.0% |
| !! | AAAAATTCAGTCTTTTCTCA+TGG | - | chr4.1:2799103-2799122 | MS.gene049110:intron | 25.0% |
| !! | ACCTGTACATAAATTTTGAA+GGG | + | chr4.1:2799502-2799521 | None:intergenic | 25.0% |
| !! | ATGAGAAAAGACTGAATTTT+TGG | + | chr4.1:2799104-2799123 | None:intergenic | 25.0% |
| !! | ATTGAGGATTTTTGTTGATA+AGG | - | chr4.1:2797702-2797721 | MS.gene049110:CDS | 25.0% |
| !! | CAAATAACACAATTGATGAT+GGG | + | chr4.1:2799726-2799745 | None:intergenic | 25.0% |
| !! | TAAAGTGTTACAAATAAAGC+AGG | + | chr4.1:2801474-2801493 | None:intergenic | 25.0% |
| !! | TACCTGTACATAAATTTTGA+AGG | + | chr4.1:2799503-2799522 | None:intergenic | 25.0% |
| !! | TGCTTATATTTTGTTACAGA+AGG | - | chr4.1:2797652-2797671 | MS.gene049110:CDS | 25.0% |
| !! | TTTTTCCTTTTATTAGAAGC+AGG | - | chr4.1:2797817-2797836 | MS.gene049110:intron | 25.0% |
| !!! | ATTTTGGAAATTAGCTAAAC+TGG | - | chr4.1:2798542-2798561 | MS.gene049110:intron | 25.0% |
| !!! | GTGTATTCTTTTGAAGTTTT+TGG | - | chr4.1:2800513-2800532 | MS.gene049110:intron | 25.0% |
| !!! | GTTGTGAATTTTTTGTATTG+AGG | - | chr4.1:2797490-2797509 | MS.gene049110:CDS | 25.0% |
| !!! | TACTTTGTTTTAGTTCATTG+AGG | - | chr4.1:2797686-2797705 | MS.gene049110:CDS | 25.0% |
| !!! | TATTGGTTCAAATTTGATGA+TGG | - | chr4.1:2796951-2796970 | MS.gene049110:intron | 25.0% |
| !!! | TTGAGGATTTTTGTTGATAA+GGG | - | chr4.1:2797703-2797722 | MS.gene049110:CDS | 25.0% |
| !!! | TTTTGGAAATTAGCTAAACT+GGG | - | chr4.1:2798543-2798562 | MS.gene049110:intron | 25.0% |
| AAAAGCCAAGTCTAAGTTAT+TGG | - | chr4.1:2796934-2796953 | MS.gene049110:intron | 30.0% | |
| AAACGAAAACTAAAATGCAC+TGG | + | chr4.1:2797785-2797804 | None:intergenic | 30.0% | |
| AATTTAGAGAACTGTGATAC+TGG | - | chr4.1:2801146-2801165 | MS.gene049110:CDS | 30.0% | |
| AATTTATGTACAGGTAGGAT+TGG | - | chr4.1:2799507-2799526 | MS.gene049110:intron | 30.0% | |
| ACAAAATTTCAGCCAAAGTA+AGG | - | chr4.1:2800062-2800081 | MS.gene049110:CDS | 30.0% | |
| AGAAGAAAAGTCTCCAAAAA+AGG | + | chr4.1:2796977-2796996 | None:intergenic | 30.0% | |
| ATGTCATAATTCCATACCAT+TGG | + | chr4.1:2797962-2797981 | None:intergenic | 30.0% | |
| CAAAAACACTTACAGGTATA+TGG | - | chr4.1:2799687-2799706 | MS.gene049110:intron | 30.0% | |
| CAATTAGAATAGCATTTCCT+TGG | - | chr4.1:2798974-2798993 | MS.gene049110:CDS | 30.0% | |
| CTTAATAGGGTTATCACTAT+GGG | - | chr4.1:2801003-2801022 | MS.gene049110:CDS | 30.0% | |
| GACTTCAATATAAATGTAGG+AGG | - | chr4.1:2798138-2798157 | MS.gene049110:intron | 30.0% | |
| GCAAATAACACAATTGATGA+TGG | + | chr4.1:2799727-2799746 | None:intergenic | 30.0% | |
| TAACAATGTTGACAATGAAG+CGG | - | chr4.1:2797329-2797348 | MS.gene049110:intron | 30.0% | |
| TAGCAGCTTAATTTAATGAG+CGG | - | chr4.1:2799886-2799905 | MS.gene049110:intron | 30.0% | |
| TCTTAATAGGGTTATCACTA+TGG | - | chr4.1:2801002-2801021 | MS.gene049110:CDS | 30.0% | |
| TGGAGATCAAAACAACAATA+TGG | - | chr4.1:2798336-2798355 | MS.gene049110:intron | 30.0% | |
| TTGAACCAATAACTTAGACT+TGG | + | chr4.1:2796942-2796961 | None:intergenic | 30.0% | |
| TTTCAGACAGTTAAACATTG+AGG | + | chr4.1:2800453-2800472 | None:intergenic | 30.0% | |
| TTTGGAAATTAGCTAAACTG+GGG | - | chr4.1:2798544-2798563 | MS.gene049110:intron | 30.0% | |
| ! | ATATTGTGAATGTTTTGCGT+CGG | - | chr4.1:2797269-2797288 | MS.gene049110:intron | 30.0% |
| ! | ATGGATTGCAAAAACTTTGA+AGG | - | chr4.1:2798286-2798305 | MS.gene049110:intron | 30.0% |
| ! | ATTAACTTGATTGCTGTTGA+AGG | - | chr4.1:2799585-2799604 | MS.gene049110:intron | 30.0% |
| ! | GGTGAATTTGAAATTTAGGA+TGG | - | chr4.1:2800414-2800433 | MS.gene049110:intron | 30.0% |
| ! | GTAAAACTTGATAATACTGC+AGG | - | chr4.1:2798505-2798524 | MS.gene049110:intron | 30.0% |
| ! | GTCTGGTGAATTTGAAATTT+AGG | - | chr4.1:2800410-2800429 | MS.gene049110:intron | 30.0% |
| ! | GTTAAACATTGAGGTATCTT+AGG | + | chr4.1:2800444-2800463 | None:intergenic | 30.0% |
| ! | GTTTTCAGAACAAAGAATGT+TGG | + | chr4.1:2798257-2798276 | None:intergenic | 30.0% |
| ! | TAGGTTTACCAAACATTTTG+AGG | + | chr4.1:2800356-2800375 | None:intergenic | 30.0% |
| ! | TCTTGAGATTTGTTTGGAAA+GGG | + | chr4.1:2799861-2799880 | None:intergenic | 30.0% |
| ! | TGAGTGTACTGATATTGATT+TGG | - | chr4.1:2799795-2799814 | MS.gene049110:intron | 30.0% |
| ! | TTATATTTTGTTACGGAGGA+GGG | + | chr4.1:2797574-2797593 | None:intergenic | 30.0% |
| ! | TTCTGAAAACTGTAAATGCA+TGG | - | chr4.1:2798267-2798286 | MS.gene049110:intron | 30.0% |
| ! | TTCTTGAGATTTGTTTGGAA+AGG | + | chr4.1:2799862-2799881 | None:intergenic | 30.0% |
| ! | TTGCTTATATTTTGTTACGG+AGG | + | chr4.1:2797578-2797597 | None:intergenic | 30.0% |
| !! | ATACAGTTTTGTGTTTTCGT+CGG | - | chr4.1:2799760-2799779 | MS.gene049110:intron | 30.0% |
| !! | ATGGTTCTGAACTTTGATAA+AGG | - | chr4.1:2801213-2801232 | MS.gene049110:intron | 30.0% |
| !! | GATGTTTTGAGTAAGCAAAA+AGG | + | chr4.1:2798084-2798103 | None:intergenic | 30.0% |
| !! | GGTGTCATTGTAAAAAATCT+GGG | - | chr4.1:2798200-2798219 | MS.gene049110:intron | 30.0% |
| !! | GTACTGATATTGATTTGGAA+AGG | - | chr4.1:2799800-2799819 | MS.gene049110:intron | 30.0% |
| !! | TATACCTGTAAGTGTTTTTG+TGG | + | chr4.1:2799687-2799706 | None:intergenic | 30.0% |
| !! | TTGAGTTGAAATGAACACAT+TGG | + | chr4.1:2798732-2798751 | None:intergenic | 30.0% |
| !! | TTTTGAGTAAGCAAAAAGGA+AGG | + | chr4.1:2798080-2798099 | None:intergenic | 30.0% |
| !!! | AATTTGATGATGGCCTTTTT+TGG | - | chr4.1:2796961-2796980 | MS.gene049110:intron | 30.0% |
| !!! | GAACTAGCAATTTAGCTTTT+GGG | + | chr4.1:2799293-2799312 | None:intergenic | 30.0% |
| !!! | TATTGTTGTTTTGATCTCCA+TGG | + | chr4.1:2798336-2798355 | None:intergenic | 30.0% |
| !!! | TGAACTAGCAATTTAGCTTT+TGG | + | chr4.1:2799294-2799313 | None:intergenic | 30.0% |
| AAAGTCCAAATGCTATGAAC+GGG | + | chr4.1:2801102-2801121 | None:intergenic | 35.0% | |
| AAATCAAGTATGTGACTGTG+AGG | - | chr4.1:2799211-2799230 | MS.gene049110:intron | 35.0% | |
| AACACATTGGACCAAATCAA+GGG | + | chr4.1:2798719-2798738 | None:intergenic | 35.0% | |
| AACATTCACAGTACTTCTTG+AGG | + | chr4.1:2798228-2798247 | None:intergenic | 35.0% | |
| AACTCTGTGGTTGAGAAATT+AGG | - | chr4.1:2796837-2796856 | MS.gene049110:CDS | 35.0% | |
| AAGTGAGTTAGAGACTCAAA+AGG | - | chr4.1:2801548-2801567 | MS.gene049110:intron | 35.0% | |
| AATCAGTTTGCATCGAAGAT+AGG | - | chr4.1:2801188-2801207 | MS.gene049110:intron | 35.0% | |
| AATTAGCTAAACTGGGGAAA+TGG | - | chr4.1:2798550-2798569 | MS.gene049110:intron | 35.0% | |
| ACATCTTCACAATTGCCTTA+TGG | - | chr4.1:2800916-2800935 | MS.gene049110:intron | 35.0% | |
| AGAGCAATTACCAAACCAAA+AGG | - | chr4.1:2800684-2800703 | MS.gene049110:intron | 35.0% | |
| AGCAGCTTAATTTAATGAGC+GGG | - | chr4.1:2799887-2799906 | MS.gene049110:intron | 35.0% | |
| AGCGAGAAAAAGAAAAGGTT+CGG | - | chr4.1:2798432-2798451 | MS.gene049110:intron | 35.0% | |
| ATATAAATGTAGGAGGAGAC+TGG | - | chr4.1:2798145-2798164 | MS.gene049110:intron | 35.0% | |
| ATCACTATGGGCGAAATAAA+TGG | - | chr4.1:2801015-2801034 | MS.gene049110:CDS | 35.0% | |
| ATCAGTTTGCATCGAAGATA+GGG | - | chr4.1:2801189-2801208 | MS.gene049110:intron | 35.0% | |
| ATCCTCCTGCTTCTAATAAA+AGG | + | chr4.1:2797825-2797844 | None:intergenic | 35.0% | |
| ATGAAGCCTTTCTTTCCAAT+AGG | + | chr4.1:2798791-2798810 | None:intergenic | 35.0% | |
| ATTTGTCAATCCATTGAGCT+TGG | + | chr4.1:2800102-2800121 | None:intergenic | 35.0% | |
| CACTATCCTATTGGAAAGAA+AGG | - | chr4.1:2798782-2798801 | MS.gene049110:CDS | 35.0% | |
| CTTGTCATTAGATAACTGTC+TGG | - | chr4.1:2800393-2800412 | MS.gene049110:intron | 35.0% | |
| GAAAGTCCAAATGCTATGAA+CGG | + | chr4.1:2801103-2801122 | None:intergenic | 35.0% | |
| GAATTATTCACCAAGCTCAA+TGG | - | chr4.1:2800089-2800108 | MS.gene049110:CDS | 35.0% | |
| GATATATGCTTCCCTTGATT+TGG | - | chr4.1:2798705-2798724 | MS.gene049110:intron | 35.0% | |
| GATGCAAATCCACTCTTATA+GGG | + | chr4.1:2797926-2797945 | None:intergenic | 35.0% | |
| GCCCTTCAAAATTTATGTAC+AGG | - | chr4.1:2799498-2799517 | MS.gene049110:intron | 35.0% | |
| GTATGGAATTATGACATGAC+AGG | - | chr4.1:2797965-2797984 | MS.gene049110:intron | 35.0% | |
| GTCTCAAAACACTATCCTAT+TGG | - | chr4.1:2798773-2798792 | MS.gene049110:CDS | 35.0% | |
| TAGATAAGCACACAGAAGAT+CGG | - | chr4.1:2800632-2800651 | MS.gene049110:intron | 35.0% | |
| TATAAATGTAGGAGGAGACT+GGG | - | chr4.1:2798146-2798165 | MS.gene049110:intron | 35.0% | |
| TATTGGTAAAGCACAACAAG+GGG | - | chr4.1:2798179-2798198 | MS.gene049110:intron | 35.0% | |
| TCATAATTCCATACCATTGG+AGG | + | chr4.1:2797959-2797978 | None:intergenic | 35.0% | |
| TCATGTAACATTTCCCCATT+AGG | - | chr4.1:2798610-2798629 | MS.gene049110:intron | 35.0% | |
| TGATGCAAATCCACTCTTAT+AGG | + | chr4.1:2797927-2797946 | None:intergenic | 35.0% | |
| TTGACATAGCAATAGAAAGC+AGG | + | chr4.1:2801347-2801366 | None:intergenic | 35.0% | |
| TTGTTGTATCATCAACTCTG+TGG | - | chr4.1:2796824-2796843 | MS.gene049110:CDS | 35.0% | |
| TTGTTTGGAAAGGGAAAAAG+CGG | + | chr4.1:2799852-2799871 | None:intergenic | 35.0% | |
| ! | AGCATCTTTTGTCTCAAAGT+TGG | + | chr4.1:2797096-2797115 | None:intergenic | 35.0% |
| ! | CTTATATTTTGTTACGGAGG+AGG | + | chr4.1:2797575-2797594 | None:intergenic | 35.0% |
| ! | GACTTTGATTTAGGAGATTC+TGG | + | chr4.1:2797068-2797087 | None:intergenic | 35.0% |
| ! | GCAGGCTTAACTTTTTGTAA+CGG | - | chr4.1:2797451-2797470 | MS.gene049110:CDS | 35.0% |
| ! | GCATCTTTTGTCTCAAAGTT+GGG | + | chr4.1:2797095-2797114 | None:intergenic | 35.0% |
| ! | GCTTAACTTTTTGTAACGGT+TGG | - | chr4.1:2797455-2797474 | MS.gene049110:CDS | 35.0% |
| ! | GTATTGGTAAAGCACAACAA+GGG | - | chr4.1:2798178-2798197 | MS.gene049110:intron | 35.0% |
| ! | GTTTTCATTGAGAACCAGTA+GGG | + | chr4.1:2799039-2799058 | None:intergenic | 35.0% |
| ! | TATTGTGAATGTTTTGCGTC+GGG | - | chr4.1:2797270-2797289 | MS.gene049110:intron | 35.0% |
| ! | TGGTAATTGCTCTTGATTTG+AGG | + | chr4.1:2800677-2800696 | None:intergenic | 35.0% |
| ! | TTCCTTTTATTAGAAGCAGG+AGG | - | chr4.1:2797820-2797839 | MS.gene049110:intron | 35.0% |
| ! | TTGGGTCTTGACTTTGATTT+AGG | + | chr4.1:2797077-2797096 | None:intergenic | 35.0% |
| ! | TTTCAGTGCGATTGATGATT+GGG | + | chr4.1:2801575-2801594 | None:intergenic | 35.0% |
| ! | TTTTCATTGAGAACCAGTAG+GGG | + | chr4.1:2799038-2799057 | None:intergenic | 35.0% |
| ! | TTTTCCAACACAAGAAATGC+CGG | + | chr4.1:2798050-2798069 | None:intergenic | 35.0% |
| !! | AACACTTCGTCTCTGAAATT+AGG | + | chr4.1:2801515-2801534 | None:intergenic | 35.0% |
| !! | AAGCTCAATGGATTGACAAA+TGG | - | chr4.1:2800101-2800120 | MS.gene049110:CDS | 35.0% |
| !! | AGTATTGGTAAAGCACAACA+AGG | - | chr4.1:2798177-2798196 | MS.gene049110:intron | 35.0% |
| !! | CAGTCTTGTTTCAGAAAATG+GGG | - | chr4.1:2801899-2801918 | MS.gene049110:CDS | 35.0% |
| !! | GCAGTCTTGTTTCAGAAAAT+GGG | - | chr4.1:2801898-2801917 | MS.gene049110:CDS | 35.0% |
| !! | GGGTGTCATTGTAAAAAATC+TGG | - | chr4.1:2798199-2798218 | MS.gene049110:intron | 35.0% |
| !! | TGAGAGTTTGATTTGCCAAA+TGG | - | chr4.1:2800199-2800218 | MS.gene049110:CDS | 35.0% |
| !! | TGCAGTCTTGTTTCAGAAAA+TGG | - | chr4.1:2801897-2801916 | MS.gene049110:CDS | 35.0% |
| !! | TTTCTGAAACAAGACTGCAA+GGG | + | chr4.1:2801896-2801915 | None:intergenic | 35.0% |
| !! | TTTTCAGTGCGATTGATGAT+TGG | + | chr4.1:2801576-2801595 | None:intergenic | 35.0% |
| !!! | GAATCCAATTGTGCGTTTTT+TGG | + | chr4.1:2796526-2796545 | None:intergenic | 35.0% |
| !!! | TCTGTTTTAGTGCTAGTATC+TGG | - | chr4.1:2799656-2799675 | MS.gene049110:intron | 35.0% |
| !!! | TTGCACTGTTTTTGCTTCTT+TGG | + | chr4.1:2797122-2797141 | None:intergenic | 35.0% |
| !!! | TTTTCTGAAACAAGACTGCA+AGG | + | chr4.1:2801897-2801916 | None:intergenic | 35.0% |
| AAACCAAAAGGAAGCTGATG+GGG | - | chr4.1:2800696-2800715 | MS.gene049110:intron | 40.0% | |
| AAACCTTAAACCTGCACCAA+AGG | + | chr4.1:2798948-2798967 | None:intergenic | 40.0% | |
| AAAGAAAAGGTTCGGAACTC+TGG | - | chr4.1:2798440-2798459 | MS.gene049110:intron | 40.0% | |
| AAATGGGGAAATTAAGCCGA+AGG | - | chr4.1:2801914-2801933 | MS.gene049110:CDS | 40.0% | |
| AACCTTAAACCTGCACCAAA+GGG | + | chr4.1:2798947-2798966 | None:intergenic | 40.0% | |
| AACGCAATCCAAATGCCTTT+AGG | - | chr4.1:2797382-2797401 | MS.gene049110:intron | 40.0% | |
| AAGTCCAAATGCTATGAACG+GGG | + | chr4.1:2801101-2801120 | None:intergenic | 40.0% | |
| AATCACAAGTTAGTAGCAGC+TGG | + | chr4.1:2801313-2801332 | None:intergenic | 40.0% | |
| ACAGGAGACAAAGATGAAGA+GGG | + | chr4.1:2799446-2799465 | None:intergenic | 40.0% | |
| ACCAAAGAATGAGAAACCCA+AGG | + | chr4.1:2798994-2799013 | None:intergenic | 40.0% | |
| ATAAATGTAGGAGGAGACTG+GGG | - | chr4.1:2798147-2798166 | MS.gene049110:intron | 40.0% | |
| ATAATACTGCAGGCAGTTCA+GGG | - | chr4.1:2798515-2798534 | MS.gene049110:intron | 40.0% | |
| CAAACCAAAAGGAAGCTGAT+GGG | - | chr4.1:2800695-2800714 | MS.gene049110:intron | 40.0% | |
| CAATATGGTGTATCTTCAGC+AGG | - | chr4.1:2798351-2798370 | MS.gene049110:intron | 40.0% | |
| CAATTGCAGCCAATAAGTTC+CGG | + | chr4.1:2797211-2797230 | None:intergenic | 40.0% | |
| CACATCAATGCTAAAGTTCC+AGG | + | chr4.1:2800829-2800848 | None:intergenic | 40.0% | |
| CACTGAAAATACCAGTACTG+AGG | - | chr4.1:2801587-2801606 | MS.gene049110:intron | 40.0% | |
| CCAGTAGCGAGAAAAAGAAA+AGG | - | chr4.1:2798427-2798446 | MS.gene049110:intron | 40.0% | |
| CGTTTGACTACACGTAAACA+AGG | + | chr4.1:2800175-2800194 | None:intergenic | 40.0% | |
| CTGCAAAATGCTGTCTCAAT+TGG | + | chr4.1:2798590-2798609 | None:intergenic | 40.0% | |
| CTTCCATCTTTGCTCAATGT+GGG | - | chr4.1:2798835-2798854 | MS.gene049110:intron | 40.0% | |
| GAACACATTGGACCAAATCA+AGG | + | chr4.1:2798720-2798739 | None:intergenic | 40.0% | |
| GACTGGGGAAGTTAAAGTAT+TGG | - | chr4.1:2798162-2798181 | MS.gene049110:intron | 40.0% | |
| GGAATTCACTCTAATCCCTT+TGG | - | chr4.1:2798929-2798948 | MS.gene049110:CDS | 40.0% | |
| GTGAATTCCACTATGAGTGT+CGG | + | chr4.1:2798918-2798937 | None:intergenic | 40.0% | |
| GTGGATTTGCATCAGAAGTT+GGG | - | chr4.1:2797933-2797952 | MS.gene049110:intron | 40.0% | |
| TACCACGATAAGTTCACTTC+TGG | - | chr4.1:2799252-2799271 | MS.gene049110:intron | 40.0% | |
| TATCCCACATTGAGCAAAGA+TGG | + | chr4.1:2798841-2798860 | None:intergenic | 40.0% | |
| TCACAATTGCCTTATGGACA+AGG | - | chr4.1:2800922-2800941 | MS.gene049110:intron | 40.0% | |
| TCATGGAACACGTGATAACA+AGG | - | chr4.1:2797425-2797444 | MS.gene049110:CDS | 40.0% | |
| TCCTTGGGTTTCTCATTCTT+TGG | - | chr4.1:2798990-2799009 | MS.gene049110:CDS | 40.0% | |
| TCTTTCGTTCCTTGTCCATA+AGG | + | chr4.1:2800934-2800953 | None:intergenic | 40.0% | |
| TGTTTGGAAAGGGAAAAAGC+GGG | + | chr4.1:2799851-2799870 | None:intergenic | 40.0% | |
| TTGAAGTGATGGCATTGCAA+GGG | + | chr4.1:2801827-2801846 | None:intergenic | 40.0% | |
| TTGAGTCTCTAACTCACTTC+TGG | + | chr4.1:2801547-2801566 | None:intergenic | 40.0% | |
| TTGTTATCACGTGTTCCATG+AGG | + | chr4.1:2797426-2797445 | None:intergenic | 40.0% | |
| TTTAGTGCTAGTATCTGGAC+AGG | - | chr4.1:2799661-2799680 | MS.gene049110:intron | 40.0% | |
| TTTCATTGAGAACCAGTAGG+GGG | + | chr4.1:2799037-2799056 | None:intergenic | 40.0% | |
| TTTGAAGGGCCTAATGTTGA+AGG | + | chr4.1:2799488-2799507 | None:intergenic | 40.0% | |
| TTTGCATCGAAGATAGGGAA+TGG | - | chr4.1:2801194-2801213 | MS.gene049110:intron | 40.0% | |
| ! | AGTGGATTTGCATCAGAAGT+TGG | - | chr4.1:2797932-2797951 | MS.gene049110:intron | 40.0% |
| ! | ATTCCGTTAAGAAGCTTGCT+AGG | - | chr4.1:2796542-2796561 | MS.gene049110:CDS | 40.0% |
| ! | ATTGTGAATGTTTTGCGTCG+GGG | - | chr4.1:2797271-2797290 | MS.gene049110:intron | 40.0% |
| ! | CAGAACAAAGAATGTTGGCT+TGG | + | chr4.1:2798252-2798271 | None:intergenic | 40.0% |
| ! | CCAAAAGTTTGAGTTTGCGA+TGG | - | chr4.1:2798878-2798897 | MS.gene049110:intron | 40.0% |
| ! | CCATCGCAAACTCAAACTTT+TGG | + | chr4.1:2798881-2798900 | None:intergenic | 40.0% |
| ! | CCTTTTCTTTTTCTCGCTAC+TGG | + | chr4.1:2798430-2798449 | None:intergenic | 40.0% |
| ! | CGTTTTCATTGAGAACCAGT+AGG | + | chr4.1:2799040-2799059 | None:intergenic | 40.0% |
| ! | TTTCTTTTTCTCGCTACTGG+TGG | + | chr4.1:2798427-2798446 | None:intergenic | 40.0% |
| !! | CAAAGGTGTTGTTGAAGTGA+CGG | + | chr4.1:2801871-2801890 | None:intergenic | 40.0% |
| !! | TGAACTGGAATTTTCAGGAC+TGG | + | chr4.1:2800770-2800789 | None:intergenic | 40.0% |
| !! | TTGAAGTGATGGTGTTGCAA+GGG | + | chr4.1:2801695-2801714 | None:intergenic | 40.0% |
| !! | TTGAAGTGATGGTGTTGCAT+GGG | + | chr4.1:2801761-2801780 | None:intergenic | 40.0% |
| !!! | ATTTTCGGCCTAAAGGCATT+TGG | + | chr4.1:2797393-2797412 | None:intergenic | 40.0% |
| !!! | CAGGACTGGTTTTATCAGTT+TGG | + | chr4.1:2800756-2800775 | None:intergenic | 40.0% |
| !!! | CCAATTGTGCGTTTTTTGGA+GGG | + | chr4.1:2796522-2796541 | None:intergenic | 40.0% |
| !!! | TCCAATTGTGCGTTTTTTGG+AGG | + | chr4.1:2796523-2796542 | None:intergenic | 40.0% |
| AAAATTGCGAGCAGTCCTCA+TGG | - | chr4.1:2797408-2797427 | MS.gene049110:CDS | 45.0% | |
| AAACAGAGCAAAGCTCCTTC+AGG | + | chr4.1:2799643-2799662 | None:intergenic | 45.0% | |
| AAAGCCGGCATTTCTTGTGT+TGG | - | chr4.1:2798043-2798062 | MS.gene049110:intron | 45.0% | |
| AACAGACAATGATGCGCTAG+CGG | + | chr4.1:2797548-2797567 | None:intergenic | 45.0% | |
| AAGCCGAAGGTCGAACAATA+GGG | - | chr4.1:2801927-2801946 | MS.gene049110:CDS | 45.0% | |
| AATAACGTCGGCAAAGCAGT+TGG | - | chr4.1:2801642-2801661 | MS.gene049110:intron | 45.0% | |
| AATCCACTCTTATAGGGACG+TGG | + | chr4.1:2797920-2797939 | None:intergenic | 45.0% | |
| AATGTTGAAGGTCCAACACG+AGG | + | chr4.1:2799476-2799495 | None:intergenic | 45.0% | |
| AGATCTATGCAGAGCAAGAG+AGG | - | chr4.1:2800953-2800972 | MS.gene049110:intron | 45.0% | |
| AGCTCCAGTTATAGCAGCAT+TGG | + | chr4.1:2798380-2798399 | None:intergenic | 45.0% | |
| AGTCCAAATGCTATGAACGG+GGG | + | chr4.1:2801100-2801119 | None:intergenic | 45.0% | |
| CACCATCACTTCAACACCTA+TGG | - | chr4.1:2801701-2801720 | MS.gene049110:intron | 45.0% | |
| CACCATCACTTCAACACCTT+TGG | - | chr4.1:2801734-2801753 | MS.gene049110:intron | 45.0% | |
| CACGTGATAACAAGGTATGC+AGG | - | chr4.1:2797433-2797452 | MS.gene049110:CDS | 45.0% | |
| CAGGCCACAAAAACACTTAC+AGG | - | chr4.1:2799680-2799699 | MS.gene049110:intron | 45.0% | |
| CCAAACCAAAAGGAAGCTGA+TGG | - | chr4.1:2800694-2800713 | MS.gene049110:intron | 45.0% | |
| CCCTCCAAAAAACGCACAAT+TGG | - | chr4.1:2796519-2796538 | MS.gene049110:CDS | 45.0% | |
| CGTCACTTCAACAACACCTT+TGG | - | chr4.1:2801869-2801888 | MS.gene049110:CDS | 45.0% | |
| CGTGTTGGACCTTCAACATT+AGG | - | chr4.1:2799476-2799495 | MS.gene049110:intron | 45.0% | |
| CTATGGCGCCTCAAAATGTT+TGG | - | chr4.1:2800345-2800364 | MS.gene049110:intron | 45.0% | |
| CTCTGTAGGAAAAGCAGGAA+AGG | - | chr4.1:2800257-2800276 | MS.gene049110:CDS | 45.0% | |
| CTGCCTAGCAAGCTTCTTAA+CGG | + | chr4.1:2796548-2796567 | None:intergenic | 45.0% | |
| GACAAGCAATCCTGACAACT+GGG | + | chr4.1:2800379-2800398 | None:intergenic | 45.0% | |
| GACAGGAGACAAAGATGAAG+AGG | + | chr4.1:2799447-2799466 | None:intergenic | 45.0% | |
| GACCAGAAGTGAACTTATCG+TGG | + | chr4.1:2799257-2799276 | None:intergenic | 45.0% | |
| GATAATACTGCAGGCAGTTC+AGG | - | chr4.1:2798514-2798533 | MS.gene049110:intron | 45.0% | |
| GATCCATCGTTTGGAAAGCT+AGG | - | chr4.1:2798475-2798494 | MS.gene049110:intron | 45.0% | |
| GCGAATTACAGCAGATCTCA+TGG | - | chr4.1:2801256-2801275 | MS.gene049110:intron | 45.0% | |
| GCTAAAGTTCCAGGAGACAT+TGG | + | chr4.1:2800820-2800839 | None:intergenic | 45.0% | |
| GCTGCTATAACTGGAGCTAT+TGG | - | chr4.1:2798382-2798401 | MS.gene049110:intron | 45.0% | |
| GCTTCCATCTTTGCTCAATG+TGG | - | chr4.1:2798834-2798853 | MS.gene049110:intron | 45.0% | |
| GGATCCACCTGTAATAACGT+CGG | - | chr4.1:2801630-2801649 | MS.gene049110:intron | 45.0% | |
| GTTGAAGTGATGGCATTGCA+AGG | + | chr4.1:2801828-2801847 | None:intergenic | 45.0% | |
| GTTTGGAAAGCTAGGACAAC+AGG | - | chr4.1:2798483-2798502 | MS.gene049110:intron | 45.0% | |
| GTTTGGAAAGGGAAAAAGCG+GGG | + | chr4.1:2799850-2799869 | None:intergenic | 45.0% | |
| TAAACAGCAGCTTCCTCTGT+AGG | - | chr4.1:2800243-2800262 | MS.gene049110:CDS | 45.0% | |
| TAAGCCGAAGGTCGAACAAT+AGG | - | chr4.1:2801926-2801945 | MS.gene049110:CDS | 45.0% | |
| TAATACTGCAGGCAGTTCAG+GGG | - | chr4.1:2798516-2798535 | MS.gene049110:intron | 45.0% | |
| TATCAGGCAAATCCTGTCAG+AGG | - | chr4.1:2799410-2799429 | MS.gene049110:intron | 45.0% | |
| TGACAAGCAATCCTGACAAC+TGG | + | chr4.1:2800380-2800399 | None:intergenic | 45.0% | |
| TGCTTTGCCGACGTTATTAC+AGG | + | chr4.1:2801640-2801659 | None:intergenic | 45.0% | |
| TTCATTGAGAACCAGTAGGG+GGG | + | chr4.1:2799036-2799055 | None:intergenic | 45.0% | |
| TTTGCCGACGTTATTACAGG+TGG | + | chr4.1:2801637-2801656 | None:intergenic | 45.0% | |
| ! | ATCCCTTTGGTGCAGGTTTA+AGG | - | chr4.1:2798942-2798961 | MS.gene049110:CDS | 45.0% |
| ! | CAGCTCGATTTCAACGCTTT+TGG | - | chr4.1:2796565-2796584 | MS.gene049110:CDS | 45.0% |
| ! | CGGAACTTATTGGCTGCAAT+TGG | - | chr4.1:2797209-2797228 | MS.gene049110:intron | 45.0% |
| ! | CTCGATTTCAACGCTTTTGG+TGG | - | chr4.1:2796568-2796587 | MS.gene049110:CDS | 45.0% |
| ! | GCTGCTGTTTACAGCTCAAA+AGG | + | chr4.1:2800234-2800253 | None:intergenic | 45.0% |
| ! | GGCAGTTCAGGGGTTTATTT+TGG | - | chr4.1:2798526-2798545 | MS.gene049110:intron | 45.0% |
| ! | TGAGCGGGCATTGTCTATTA+TGG | - | chr4.1:2799902-2799921 | MS.gene049110:intron | 45.0% |
| ! | TGAGGACTGCTCGCAATTTT+CGG | + | chr4.1:2797408-2797427 | None:intergenic | 45.0% |
| ! | TGGTGGTGATGAATAACCAG+AGG | + | chr4.1:2798410-2798429 | None:intergenic | 45.0% |
| ! | TGTCCTAGCTTTCCAAACGA+TGG | + | chr4.1:2798481-2798500 | None:intergenic | 45.0% |
| !! | AGACAGTCTAGCTCTCTTCA+TGG | + | chr4.1:2798757-2798776 | None:intergenic | 45.0% |
| !! | CCATCAGCTTCCTTTTGGTT+TGG | + | chr4.1:2800697-2800716 | None:intergenic | 45.0% |
| !! | CTTTCCTGCTTTTCCTACAG+AGG | + | chr4.1:2800259-2800278 | None:intergenic | 45.0% |
| !! | GACAGTCTAGCTCTCTTCAT+GGG | + | chr4.1:2798756-2798775 | None:intergenic | 45.0% |
| !! | GACCAAAGGTGTTGAAGTGA+TGG | + | chr4.1:2801739-2801758 | None:intergenic | 45.0% |
| !! | GACCATAGGTGTTGAAGTGA+TGG | + | chr4.1:2801706-2801725 | None:intergenic | 45.0% |
| !! | GCGTTCTAAAGTTGCCTCAA+CGG | + | chr4.1:2797367-2797386 | None:intergenic | 45.0% |
| !! | GTTGAAGTGATGGTGTTGCA+AGG | + | chr4.1:2801696-2801715 | None:intergenic | 45.0% |
| !! | GTTGAAGTGATGGTGTTGCA+TGG | + | chr4.1:2801696-2801715 | None:intergenic | 45.0% |
| !! | TTGAAGTGACGGTGTTGCAA+GGG | + | chr4.1:2801860-2801879 | None:intergenic | 45.0% |
| AACCCCCCGTTCATAGCATT+TGG | - | chr4.1:2801094-2801113 | MS.gene049110:CDS | 50.0% | |
| AACGATGGATCCCTGATGGA+CGG | + | chr4.1:2798466-2798485 | None:intergenic | 50.0% | |
| AAGCTTCCTGCAGTTGAGAG+TGG | - | chr4.1:2799317-2799336 | MS.gene049110:intron | 50.0% | |
| AAGTTGGGCCTCCAATGGTA+TGG | - | chr4.1:2797948-2797967 | MS.gene049110:intron | 50.0% | |
| ACAAGACTGCAAGGGACCAA+AGG | + | chr4.1:2801888-2801907 | None:intergenic | 50.0% | |
| AGCAATCCTGACAACTGGGT+AGG | + | chr4.1:2800375-2800394 | None:intergenic | 50.0% | |
| AGCTGATGGGGAGAAAGTTG+TGG | - | chr4.1:2800708-2800727 | MS.gene049110:intron | 50.0% | |
| ATCAGAAGTTGGGCCTCCAA+TGG | - | chr4.1:2797943-2797962 | MS.gene049110:intron | 50.0% | |
| ATGGCATTGCAAGGGACCAA+AGG | + | chr4.1:2801819-2801838 | None:intergenic | 50.0% | |
| CAACCACGTCCCTATAAGAG+TGG | - | chr4.1:2797914-2797933 | MS.gene049110:intron | 50.0% | |
| CAAGTATGTGACTGTGAGGC+TGG | - | chr4.1:2799215-2799234 | MS.gene049110:intron | 50.0% | |
| CACCATCACTTCAGCACCTA+TGG | - | chr4.1:2801668-2801687 | MS.gene049110:intron | 50.0% | |
| CAGCCAATAAGTTCCGGCAA+AGG | + | chr4.1:2797205-2797224 | None:intergenic | 50.0% | |
| CATACAACCACAGCACCTGA+AGG | - | chr4.1:2799625-2799644 | MS.gene049110:intron | 50.0% | |
| CCTAAGACTGACCCCACTTT+GGG | + | chr4.1:2796661-2796680 | None:intergenic | 50.0% | |
| GCAGCCAATGCTGCTATAAC+TGG | - | chr4.1:2798373-2798392 | MS.gene049110:intron | 50.0% | |
| GCGCAACAACAAGTGCATAG+AGG | + | chr4.1:2797183-2797202 | None:intergenic | 50.0% | |
| GCTTCAGTCGTCGTAGCAAA+AGG | + | chr4.1:2799063-2799082 | None:intergenic | 50.0% | |
| GCTTCCTCTGTAGGAAAAGC+AGG | - | chr4.1:2800252-2800271 | MS.gene049110:CDS | 50.0% | |
| GGGAAAAAGCGGGGTAAATG+TGG | + | chr4.1:2799841-2799860 | None:intergenic | 50.0% | |
| GGTAAACCTACCCAGTTGTC+AGG | - | chr4.1:2800366-2800385 | MS.gene049110:intron | 50.0% | |
| GTCCAAATGCTATGAACGGG+GGG | + | chr4.1:2801099-2801118 | None:intergenic | 50.0% | |
| TAGCTTCCACTCTCAACTGC+AGG | + | chr4.1:2799326-2799345 | None:intergenic | 50.0% | |
| TCATTGAGAACCAGTAGGGG+GGG | + | chr4.1:2799035-2799054 | None:intergenic | 50.0% | |
| TCCAAACGATGGATCCCTGA+TGG | + | chr4.1:2798470-2798489 | None:intergenic | 50.0% | |
| TCCATCAGGGATCCATCGTT+TGG | - | chr4.1:2798466-2798485 | MS.gene049110:intron | 50.0% | |
| TGAAGGAAGTGAAGAGCGAC+AGG | - | chr4.1:2798303-2798322 | MS.gene049110:intron | 50.0% | |
| TGCCATCACTTCAACGCCTT+TGG | - | chr4.1:2801833-2801852 | MS.gene049110:CDS | 50.0% | |
| ! | AAGGTCCAACACGAGGTACT+GGG | + | chr4.1:2799469-2799488 | None:intergenic | 50.0% |
| ! | CACTCTAATCCCTTTGGTGC+AGG | - | chr4.1:2798935-2798954 | MS.gene049110:CDS | 50.0% |
| ! | GCTCGCAATTTTCGGCCTAA+AGG | + | chr4.1:2797400-2797419 | None:intergenic | 50.0% |
| ! | GTGCTGATGTTCCAAAAGGG+AGG | - | chr4.1:2800794-2800813 | MS.gene049110:intron | 50.0% |
| ! | TCTCCCCATCAGCTTCCTTT+TGG | + | chr4.1:2800702-2800721 | None:intergenic | 50.0% |
| !! | AAAGATGAAGAGGGTGCTGC+AGG | + | chr4.1:2799437-2799456 | None:intergenic | 50.0% |
| !! | ACTGGAGCTATTGGTTCCTC+TGG | - | chr4.1:2798391-2798410 | MS.gene049110:intron | 50.0% |
| !! | ACTTGTTGTTGCGCCTTTGC+CGG | - | chr4.1:2797189-2797208 | MS.gene049110:intron | 50.0% |
| !! | ATGGTGTTGCAAGGGACCAT+AGG | + | chr4.1:2801687-2801706 | None:intergenic | 50.0% |
| !! | ATGGTGTTGCATGGGACCAA+AGG | + | chr4.1:2801753-2801772 | None:intergenic | 50.0% |
| !! | GACCAAAGGCGTTGAAGTGA+TGG | + | chr4.1:2801838-2801857 | None:intergenic | 50.0% |
| !! | GACCATAGGTGCTGAAGTGA+TGG | + | chr4.1:2801673-2801692 | None:intergenic | 50.0% |
| !! | GTTGAAGTGACGGTGTTGCA+AGG | + | chr4.1:2801861-2801880 | None:intergenic | 50.0% |
| AAAGGGAGGCCAATGTCTCC+TGG | - | chr4.1:2800808-2800827 | MS.gene049110:intron | 55.0% | |
| ACTTTGGGTGCAGGAAGAGG+AGG | + | chr4.1:2796646-2796665 | None:intergenic | 55.0% | |
| ATGAGCCATCGACGCAGTTG+AGG | + | chr4.1:2800887-2800906 | None:intergenic | 55.0% | |
| CCCAAAGTGGGGTCAGTCTT+AGG | - | chr4.1:2796658-2796677 | MS.gene049110:CDS | 55.0% | |
| CCTCTTCCTGCACCCAAAGT+GGG | - | chr4.1:2796646-2796665 | MS.gene049110:CDS | 55.0% | |
| CTCTTCCTGCACCCAAAGTG+GGG | - | chr4.1:2796647-2796666 | MS.gene049110:CDS | 55.0% | |
| GAAGGTCCAACACGAGGTAC+TGG | + | chr4.1:2799470-2799489 | None:intergenic | 55.0% | |
| GAGTTTGCGATGGCCCATTC+TGG | - | chr4.1:2798888-2798907 | MS.gene049110:intron | 55.0% | |
| GCCTAAGACTGACCCCACTT+TGG | + | chr4.1:2796662-2796681 | None:intergenic | 55.0% | |
| GCGCCTTTGCCGGAACTTAT+TGG | - | chr4.1:2797199-2797218 | MS.gene049110:intron | 55.0% | |
| GCGTCGGGGATATATTGCGA+TGG | - | chr4.1:2797285-2797304 | MS.gene049110:intron | 55.0% | |
| TCCTCTTCCTGCACCCAAAG+TGG | - | chr4.1:2796645-2796664 | MS.gene049110:CDS | 55.0% | |
| TGAGCCATCGACGCAGTTGA+GGG | + | chr4.1:2800886-2800905 | None:intergenic | 55.0% | |
| TGGCTGTCCGACACTCATAG+TGG | - | chr4.1:2798908-2798927 | MS.gene049110:intron | 55.0% | |
| ! | CAAAGCTCCTTCAGGTGCTG+TGG | + | chr4.1:2799635-2799654 | None:intergenic | 55.0% |
| ! | GCAGGAAGAGGAGGAAGTGT+CGG | + | chr4.1:2796637-2796656 | None:intergenic | 55.0% |
| !! | ACGGTGTTGCAAGGGACCAA+AGG | + | chr4.1:2801852-2801871 | None:intergenic | 55.0% |
| !! | GAGCGACAGGCTTTGTTCCA+TGG | - | chr4.1:2798316-2798335 | MS.gene049110:intron | 55.0% |
| !! | GAGTGTCGGACAGCCAGAAT+GGG | + | chr4.1:2798904-2798923 | None:intergenic | 55.0% |
| !! | GGAGACATTGGCCTCCCTTT+TGG | + | chr4.1:2800808-2800827 | None:intergenic | 55.0% |
| !! | TGAGTGTCGGACAGCCAGAA+TGG | + | chr4.1:2798905-2798924 | None:intergenic | 55.0% |
| ACTGACCCCACTTTGGGTGC+AGG | + | chr4.1:2796655-2796674 | None:intergenic | 60.0% | |
| ACTGAGGCAGCGCAACAGCA+AGG | - | chr4.1:2801603-2801622 | MS.gene049110:intron | 60.0% | |
| AGCCATCGACGCAGTTGAGG+GGG | + | chr4.1:2800884-2800903 | None:intergenic | 60.0% | |
| CCCACTTTGGGTGCAGGAAG+AGG | + | chr4.1:2796649-2796668 | None:intergenic | 60.0% | |
| CCTGTCCCAGTACCTCGTGT+TGG | - | chr4.1:2799461-2799480 | MS.gene049110:intron | 60.0% | |
| CTGTTGCGCTGCCTCAGTAC+TGG | + | chr4.1:2801601-2801620 | None:intergenic | 60.0% | |
| GAGCCATCGACGCAGTTGAG+GGG | + | chr4.1:2800885-2800904 | None:intergenic | 60.0% | |
| GCAGCGCAACAGCAAGGACT+GGG | - | chr4.1:2801609-2801628 | MS.gene049110:intron | 60.0% | |
| GGAACTCTGGCCGTCCATCA+GGG | - | chr4.1:2798453-2798472 | MS.gene049110:intron | 60.0% | |
| GGCAAGACGAGAAGCCGTTG+AGG | - | chr4.1:2797350-2797369 | MS.gene049110:intron | 60.0% | |
| ! | TCCGGCAGAGGTGCAGTTAC+CGG | + | chr4.1:2796598-2796617 | None:intergenic | 60.0% |
| !! | CAACGCTTTTGGTGGCACGC+CGG | - | chr4.1:2796576-2796595 | MS.gene049110:CDS | 60.0% |
| !! | CCAACACGAGGTACTGGGAC+AGG | + | chr4.1:2799464-2799483 | None:intergenic | 60.0% |
| !! | GAAGTGTCGGCGGTGGTTGT+GGG | + | chr4.1:2796624-2796643 | None:intergenic | 60.0% |
| !! | GGAAGAGGAGGAAGTGTCGG+CGG | + | chr4.1:2796634-2796653 | None:intergenic | 60.0% |
| CGGAACTCTGGCCGTCCATC+AGG | - | chr4.1:2798452-2798471 | MS.gene049110:intron | 65.0% | |
| GAGAACCAGTAGGGGGGGCT+AGG | + | chr4.1:2799030-2799049 | None:intergenic | 65.0% | |
| GCCGGTAACTGCACCTCTGC+CGG | - | chr4.1:2796594-2796613 | MS.gene049110:CDS | 65.0% | |
| GGCAGCGCAACAGCAAGGAC+TGG | - | chr4.1:2801608-2801627 | MS.gene049110:intron | 65.0% | |
| GGCGGTGGTTGTGGGTGTTC+CGG | + | chr4.1:2796616-2796635 | None:intergenic | 65.0% | |
| GGTTGTGGGTGTTCCGGCAG+AGG | + | chr4.1:2796610-2796629 | None:intergenic | 65.0% | |
| TGCCCCCTCAACTGCGTCGA+TGG | - | chr4.1:2800879-2800898 | MS.gene049110:intron | 65.0% | |
| ! | GGTGCTGCAGGACCTCTGAC+AGG | + | chr4.1:2799425-2799444 | None:intergenic | 65.0% |
| !! | AGAGGAGGAAGTGTCGGCGG+TGG | + | chr4.1:2796631-2796650 | None:intergenic | 65.0% |
| !! | GGAAGTGTCGGCGGTGGTTG+TGG | + | chr4.1:2796625-2796644 | None:intergenic | 65.0% |
| CGAAGCCTAGCCCCCCCTAC+TGG | - | chr4.1:2799022-2799041 | MS.gene049110:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 2796493 | 2801947 | 2796493 | ID=MS.gene049110 |
| chr4.1 | mRNA | 2796493 | 2801947 | 2796493 | ID=MS.gene049110.t1;Parent=MS.gene049110 |
| chr4.1 | exon | 2801772 | 2801947 | 2801772 | ID=MS.gene049110.t1.exon1;Parent=MS.gene049110.t1 |
| chr4.1 | CDS | 2801772 | 2801947 | 2801772 | ID=cds.MS.gene049110.t1;Parent=MS.gene049110.t1 |
| chr4.1 | exon | 2801272 | 2801379 | 2801272 | ID=MS.gene049110.t1.exon2;Parent=MS.gene049110.t1 |
| chr4.1 | CDS | 2801272 | 2801379 | 2801272 | ID=cds.MS.gene049110.t1;Parent=MS.gene049110.t1 |
| chr4.1 | exon | 2800994 | 2801171 | 2800994 | ID=MS.gene049110.t1.exon3;Parent=MS.gene049110.t1 |
| chr4.1 | CDS | 2800994 | 2801171 | 2800994 | ID=cds.MS.gene049110.t1;Parent=MS.gene049110.t1 |
| chr4.1 | exon | 2799936 | 2800283 | 2799936 | ID=MS.gene049110.t1.exon4;Parent=MS.gene049110.t1 |
| chr4.1 | CDS | 2799936 | 2800283 | 2799936 | ID=cds.MS.gene049110.t1;Parent=MS.gene049110.t1 |
| chr4.1 | exon | 2798921 | 2799024 | 2798921 | ID=MS.gene049110.t1.exon5;Parent=MS.gene049110.t1 |
| chr4.1 | CDS | 2798921 | 2799024 | 2798921 | ID=cds.MS.gene049110.t1;Parent=MS.gene049110.t1 |
| chr4.1 | exon | 2798739 | 2798833 | 2798739 | ID=MS.gene049110.t1.exon6;Parent=MS.gene049110.t1 |
| chr4.1 | CDS | 2798739 | 2798833 | 2798739 | ID=cds.MS.gene049110.t1;Parent=MS.gene049110.t1 |
| chr4.1 | exon | 2797404 | 2797823 | 2797404 | ID=MS.gene049110.t1.exon7;Parent=MS.gene049110.t1 |
| chr4.1 | CDS | 2797404 | 2797823 | 2797404 | ID=cds.MS.gene049110.t1;Parent=MS.gene049110.t1 |
| chr4.1 | exon | 2796493 | 2796917 | 2796493 | ID=MS.gene049110.t1.exon8;Parent=MS.gene049110.t1 |
| chr4.1 | CDS | 2796493 | 2796917 | 2796493 | ID=cds.MS.gene049110.t1;Parent=MS.gene049110.t1 |
| Gene Sequence |
| Protein sequence |
