Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059637.t1 | XP_003620600.2 | 92.7 | 630 | 22 | 2 | 1 | 630 | 1 | 606 | 1.10E-301 | 1045.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059637.t1 | Q9SZD1 | 55.4 | 527 | 188 | 13 | 44 | 537 | 22 | 534 | 1.7e-138 | 494.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059637.t1 | A0A0C3VZM0 | 92.7 | 630 | 22 | 2 | 1 | 630 | 1 | 606 | 7.6e-302 | 1045.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene059637.t1 | TF | CPP |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene059637 | MS.gene69136 | 0.852861 | 3.50E-61 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene059637 | MS.gene69136 | PPI |
MS.gene059637 | MS.gene049110 | PPI |
MS.gene059637 | MS.gene69135 | PPI |
MS.gene059637 | MS.gene05904 | PPI |
MS.gene015761 | MS.gene059637 | PPI |
MS.gene059637 | MS.gene61350 | PPI |
MS.gene059637 | MS.gene04747 | PPI |
MS.gene059637 | MS.gene042998 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059637.t1 | MTR_6g087590 | 94.127 | 630 | 13 | 2 | 1 | 630 | 1 | 606 | 0.0 | 1209 |
MS.gene059637.t1 | MTR_8g103320 | 69.260 | 527 | 108 | 9 | 1 | 524 | 1 | 476 | 0.0 | 707 |
MS.gene059637.t1 | MTR_3g110122 | 42.486 | 539 | 267 | 17 | 51 | 569 | 61 | 576 | 5.34e-114 | 353 |
MS.gene059637.t1 | MTR_5g006530 | 42.073 | 164 | 92 | 2 | 96 | 258 | 232 | 393 | 1.61e-30 | 126 |
MS.gene059637.t1 | MTR_5g006530 | 42.073 | 164 | 92 | 2 | 96 | 258 | 456 | 617 | 1.64e-30 | 128 |
MS.gene059637.t1 | MTR_1g012020 | 47.727 | 132 | 60 | 3 | 130 | 255 | 498 | 626 | 5.88e-29 | 123 |
MS.gene059637.t1 | MTR_1g103230 | 38.525 | 122 | 66 | 3 | 142 | 258 | 450 | 567 | 2.09e-15 | 80.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059637.t1 | AT4G29000 | 56.144 | 529 | 183 | 15 | 43 | 537 | 21 | 534 | 0.0 | 533 |
MS.gene059637.t1 | AT2G20110 | 51.976 | 506 | 191 | 13 | 45 | 537 | 21 | 487 | 8.26e-166 | 485 |
MS.gene059637.t1 | AT2G20110 | 51.976 | 506 | 191 | 13 | 45 | 537 | 21 | 487 | 1.42e-165 | 486 |
MS.gene059637.t1 | AT2G20110 | 51.267 | 513 | 191 | 14 | 45 | 537 | 21 | 494 | 1.30e-162 | 478 |
MS.gene059637.t1 | AT5G25790 | 42.152 | 446 | 199 | 12 | 90 | 524 | 51 | 448 | 1.14e-103 | 322 |
MS.gene059637.t1 | AT5G25790 | 42.152 | 446 | 199 | 12 | 90 | 524 | 51 | 448 | 2.48e-103 | 323 |
MS.gene059637.t1 | AT5G25790 | 41.928 | 446 | 196 | 13 | 90 | 524 | 51 | 444 | 5.11e-101 | 315 |
MS.gene059637.t1 | AT3G16160 | 30.935 | 417 | 180 | 13 | 113 | 518 | 43 | 362 | 3.36e-42 | 157 |
MS.gene059637.t1 | AT3G22760 | 42.289 | 201 | 83 | 7 | 93 | 266 | 147 | 341 | 8.38e-36 | 141 |
MS.gene059637.t1 | AT3G22760 | 42.289 | 201 | 83 | 7 | 93 | 266 | 270 | 464 | 1.46e-35 | 142 |
MS.gene059637.t1 | AT3G22780 | 34.016 | 244 | 135 | 6 | 52 | 274 | 312 | 550 | 1.82e-33 | 136 |
MS.gene059637.t1 | AT4G14770 | 35.556 | 225 | 120 | 6 | 52 | 259 | 289 | 505 | 2.09e-33 | 136 |
MS.gene059637.t1 | AT4G14770 | 35.556 | 225 | 120 | 6 | 52 | 259 | 269 | 485 | 2.10e-33 | 136 |
MS.gene059637.t1 | AT4G14770 | 35.556 | 225 | 120 | 6 | 52 | 259 | 270 | 486 | 2.21e-33 | 136 |
MS.gene059637.t1 | AT3G04850 | 46.512 | 129 | 68 | 1 | 130 | 257 | 453 | 581 | 2.15e-30 | 127 |
Find 163 sgRNAs with CRISPR-Local
Find 375 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGAGGGCTGCTCGCAATTT+TGG | 0.046264 | 6.1:-76287159 | None:intergenic |
TTGCACTGCCTTTGCTTCTT+TGG | 0.171967 | 6.1:-76286335 | None:intergenic |
TCCGGATGAACAACATTCTT+TGG | 0.229319 | 6.1:-76284898 | None:intergenic |
ATTGATACTGTAGCTGAAAA+TGG | 0.265617 | 6.1:+76290661 | MS.gene059637:CDS |
GCGGCAAATGCTGCCATAAC+TGG | 0.288463 | 6.1:+76287987 | MS.gene059637:CDS |
CAAGCTGCAAAGACGCTTGC+AGG | 0.309609 | 6.1:+76288798 | MS.gene059637:CDS |
CCTTCTTTCACTTCAAAGTT+AGG | 0.315523 | 6.1:-76286308 | None:intergenic |
TAAGGAGCTTTGTTCAGTTC+TGG | 0.332795 | 6.1:+76288761 | MS.gene059637:CDS |
TCAGTTCTGGTACTAGTATC+TGG | 0.333159 | 6.1:+76288774 | MS.gene059637:CDS |
TCTCAATAGAGTTATTACTA+TGG | 0.333741 | 6.1:+76289575 | MS.gene059637:CDS |
GCAACAGCAGGTGGTTCAAC+AGG | 0.346703 | 6.1:+76285059 | MS.gene059637:CDS |
TGCGGCTGCAACGGCGGCTG+CGG | 0.348875 | 6.1:+76284939 | MS.gene059637:CDS |
TTAGGTCTTGATCTTGGTTT+GGG | 0.348976 | 6.1:-76286290 | None:intergenic |
GATCCAATCAACAATGAAAC+TGG | 0.349953 | 6.1:+76290436 | MS.gene059637:CDS |
TTTCCAGTTTCATTGTTGAT+TGG | 0.364933 | 6.1:-76290439 | None:intergenic |
AAGTGAATTAGAGAATAAAA+AGG | 0.370167 | 6.1:+76290414 | MS.gene059637:CDS |
GTTAGGTCTTGATCTTGGTT+TGG | 0.377110 | 6.1:-76286291 | None:intergenic |
AACACTCTTCTGTGAGGGTT+GGG | 0.378551 | 6.1:+76285163 | MS.gene059637:CDS |
AGAGACAAAGTGTTCTTCAT+TGG | 0.385382 | 6.1:+76290387 | MS.gene059637:intron |
ATTACTATGGGAGAGATAAA+TGG | 0.386685 | 6.1:+76289588 | MS.gene059637:CDS |
GCTGCCATAACTGGAGCTAT+TGG | 0.394392 | 6.1:+76287996 | MS.gene059637:CDS |
CTCAGGGAGCACGCGATAGC+AGG | 0.397812 | 6.1:+76287177 | MS.gene059637:CDS |
GTCGTAACCGTAACAAATTC+CGG | 0.402486 | 6.1:-76284916 | None:intergenic |
CAAAATTGCGAGCAGCCCTC+AGG | 0.414226 | 6.1:+76287160 | MS.gene059637:CDS |
CCGAAAAGACCGATGTCTCC+TGG | 0.421935 | 6.1:+76289381 | MS.gene059637:CDS |
AAATTGCGAAGATGTATTGC+AGG | 0.422987 | 6.1:-76289481 | None:intergenic |
AGCATTCACAGTACTTCTTA+AGG | 0.425540 | 6.1:-76287842 | None:intergenic |
TCAAAGTTAGGTCTTGATCT+TGG | 0.425628 | 6.1:-76286296 | None:intergenic |
CTCAATAGAGTTATTACTAT+GGG | 0.427779 | 6.1:+76289576 | MS.gene059637:CDS |
ATCAAAGAAAAGAAAAGGTC+AGG | 0.431936 | 6.1:+76288046 | MS.gene059637:CDS |
CTGCAAGCGTCTTTGCAGCT+TGG | 0.434786 | 6.1:-76288797 | None:intergenic |
TGTCCCGGCTTGCTAATTGA+TGG | 0.441456 | 6.1:-76288098 | None:intergenic |
CGTGGTACAAATCCAACATT+AGG | 0.442565 | 6.1:+76288603 | MS.gene059637:CDS |
GTCTGCACCGGCGTTGGCAC+TGG | 0.443637 | 6.1:-76285135 | None:intergenic |
TCCAAAGAATGTTGTTCATC+CGG | 0.443750 | 6.1:+76284897 | MS.gene059637:CDS |
GTCCATCAAAATTAAAGTAC+AGG | 0.444356 | 6.1:+76288631 | MS.gene059637:CDS |
AATTAGCAAGCCGGGACAAC+AGG | 0.448943 | 6.1:+76288103 | MS.gene059637:CDS |
GAGTGTGACGGTGCAGAAAC+CGG | 0.453981 | 6.1:+76285083 | MS.gene059637:CDS |
TCTGTCACTCCTTGTCCGTC+AGG | 0.456188 | 6.1:-76289504 | None:intergenic |
GCATGGGTCGTTTGCCCGAT+GGG | 0.456405 | 6.1:-76289459 | None:intergenic |
GGCAAACCACCCACTCCAAC+CGG | 0.458936 | 6.1:-76285102 | None:intergenic |
TGAGGGAAGTGAAGAGAGAC+AGG | 0.459062 | 6.1:+76287920 | MS.gene059637:CDS |
CTTGCTAATTGATGGATCCT+TGG | 0.460693 | 6.1:-76288090 | None:intergenic |
GAGAGACAGGCTTTGTTTCG+TGG | 0.462723 | 6.1:+76287933 | MS.gene059637:CDS |
TGACAGCTGCCTCTCCCATC+GGG | 0.464632 | 6.1:+76289445 | MS.gene059637:CDS |
GAACTGAACAAAGCTCCTTA+AGG | 0.466976 | 6.1:-76288758 | None:intergenic |
CAAAGCTGCATTTCCACCTA+TGG | 0.469835 | 6.1:+76290513 | MS.gene059637:CDS |
TTTCAGCTACAGTATCAATA+GGG | 0.473556 | 6.1:-76290657 | None:intergenic |
CATGGACTGCAAGAACTTTG+AGG | 0.474484 | 6.1:+76287902 | MS.gene059637:CDS |
ACCGGCGTTGGCACTGGTAC+CGG | 0.479330 | 6.1:-76285129 | None:intergenic |
CAACACTCTTCTGTGAGGGT+TGG | 0.479410 | 6.1:+76285162 | MS.gene059637:CDS |
TGCTATCGCGTGCTCCCTGA+GGG | 0.480213 | 6.1:-76287175 | None:intergenic |
AACACCTGCAGTTCCACCTA+TGG | 0.480803 | 6.1:+76290612 | MS.gene059637:CDS |
CAATAAATGTAGGAGGAGGC+TGG | 0.481773 | 6.1:+76287762 | MS.gene059637:intron |
AGCGTAATCCAAATGCATTT+AGG | 0.482400 | 6.1:+76287135 | MS.gene059637:CDS |
AACACCTGCAGTTCCACCTA+TGG | 0.482822 | 6.1:+76290546 | MS.gene059637:CDS |
TGTACAGCCACATCACCTTA+AGG | 0.485350 | 6.1:+76288743 | MS.gene059637:CDS |
ATGACAGCTGCCTCTCCCAT+CGG | 0.486923 | 6.1:+76289444 | MS.gene059637:CDS |
TGTTCATCCGGAATTTGTTA+CGG | 0.488179 | 6.1:+76284909 | MS.gene059637:CDS |
CCATCTGAACATGAATTACC+AGG | 0.490481 | 6.1:-76289348 | None:intergenic |
ATCTTGTTCGTCACACATCA+AGG | 0.491361 | 6.1:-76289412 | None:intergenic |
AGTGGGTGGTTTGCCGATAC+CGG | 0.492641 | 6.1:+76285110 | MS.gene059637:CDS |
CAGAACAAAGAACGTTGGCT+TGG | 0.493572 | 6.1:-76287866 | None:intergenic |
GTTGGCACTGGTACCGGTAT+CGG | 0.494174 | 6.1:-76285123 | None:intergenic |
GGCATGGGTCGTTTGCCCGA+TGG | 0.499482 | 6.1:-76289460 | None:intergenic |
TACTGAGATAGTACATCAGC+AGG | 0.501027 | 6.1:+76290468 | MS.gene059637:CDS |
AAGGTCAGGAACTCTTCTTA+TGG | 0.502814 | 6.1:+76288060 | MS.gene059637:CDS |
TGGAGAATCCAAGCTGAAGA+TGG | 0.503658 | 6.1:+76290681 | MS.gene059637:CDS |
GGTCGTTTGCCCGATGGGAG+AGG | 0.505246 | 6.1:-76289454 | None:intergenic |
ATGGACTGCAAGAACTTTGA+GGG | 0.505326 | 6.1:+76287903 | MS.gene059637:CDS |
ATGTAGGAGGAGGCTGGGGA+AGG | 0.505481 | 6.1:+76287768 | MS.gene059637:intron |
TGCGACTGCGACGGCGTGGT+TGG | 0.505644 | 6.1:+76284969 | MS.gene059637:CDS |
TACGACTGCGGCTGCAACGG+CGG | 0.507622 | 6.1:+76284933 | MS.gene059637:CDS |
GGATGAACAACATTCTTTGG+AGG | 0.510272 | 6.1:-76284895 | None:intergenic |
TTCTGAGAATTGTAGATGCA+TGG | 0.511900 | 6.1:+76287884 | MS.gene059637:CDS |
GGTGTTGAAGTTGCGGCCAT+AGG | 0.512968 | 6.1:-76290628 | None:intergenic |
CGAAAAGACCGATGTCTCCT+GGG | 0.513429 | 6.1:+76289382 | MS.gene059637:CDS |
CTGATGTACTATCTCAGTAC+TGG | 0.516199 | 6.1:-76290464 | None:intergenic |
TGTTGAACCACCTGCTGTTG+CGG | 0.517452 | 6.1:-76285057 | None:intergenic |
GAAGCTGATGAGGAGGGTGC+TGG | 0.517647 | 6.1:-76288564 | None:intergenic |
GATGGACTCTGACCTAATGT+TGG | 0.519331 | 6.1:-76288615 | None:intergenic |
CACATCAAGGCTAAAGTCCC+AGG | 0.519918 | 6.1:-76289399 | None:intergenic |
GCAGTCGAAACCGCAACAGC+AGG | 0.525250 | 6.1:+76285047 | MS.gene059637:CDS |
CCAGCATCAAAGAAAAGAAA+AGG | 0.526932 | 6.1:+76288041 | MS.gene059637:CDS |
ACTGGAGCTATTGGTTCCTA+CGG | 0.529339 | 6.1:+76288005 | MS.gene059637:CDS |
GCGAAGATGTATTGCAGGCA+TGG | 0.531295 | 6.1:-76289476 | None:intergenic |
GGTGTTGAAGTTGTGGCCAT+AGG | 0.532141 | 6.1:-76290562 | None:intergenic |
CAGAAACCGGTTGGAGTGGG+TGG | 0.532614 | 6.1:+76285096 | MS.gene059637:CDS |
AATAAATGTAGGAGGAGGCT+GGG | 0.532720 | 6.1:+76287763 | MS.gene059637:intron |
GGTTACGACTGCGGCTGCAA+CGG | 0.534767 | 6.1:+76284930 | MS.gene059637:CDS |
GGTGTTGAAGTTGCGGCCAT+AGG | 0.535923 | 6.1:-76290529 | None:intergenic |
GTACCACGAGCACTTGAGAC+AGG | 0.538002 | 6.1:-76288588 | None:intergenic |
ATTTGTTACGGTTACGACTG+CGG | 0.540360 | 6.1:+76284921 | MS.gene059637:CDS |
GGAACCAATAGCTCCAGTTA+TGG | 0.541771 | 6.1:-76288000 | None:intergenic |
AAAATTGCGAGCAGCCCTCA+GGG | 0.542064 | 6.1:+76287161 | MS.gene059637:CDS |
GCTCTTGAGTTGATGAAGCA+AGG | 0.542763 | 6.1:-76289242 | None:intergenic |
GAGTGTTGAATTGTCTGCAC+CGG | 0.543822 | 6.1:-76285147 | None:intergenic |
CTCTTGAGTTGATGAAGCAA+GGG | 0.545085 | 6.1:-76289241 | None:intergenic |
CCTAACTTTGAAGTGAAAGA+AGG | 0.546661 | 6.1:+76286308 | MS.gene059637:CDS |
AAGGTACTCCAAAGAAGCAA+AGG | 0.548812 | 6.1:+76286327 | MS.gene059637:CDS |
GGATCCATCAATTAGCAAGC+CGG | 0.552604 | 6.1:+76288094 | MS.gene059637:CDS |
GATCCATCAATTAGCAAGCC+GGG | 0.555761 | 6.1:+76288095 | MS.gene059637:CDS |
CAACAGCAGGTGGTTCAACA+GGG | 0.557867 | 6.1:+76285060 | MS.gene059637:CDS |
GGCTGCAAATGCGACTGCGA+CGG | 0.559897 | 6.1:+76284960 | MS.gene059637:CDS |
TGAGACAGGTGAAGCTGATG+AGG | 0.562009 | 6.1:-76288574 | None:intergenic |
CTTCTTATGGCCTACAGCCA+AGG | 0.564439 | 6.1:+76288073 | MS.gene059637:CDS |
CTGCTATCGCGTGCTCCCTG+AGG | 0.567725 | 6.1:-76287176 | None:intergenic |
GTTGAAGTTGCGGCCATAGG+TGG | 0.568296 | 6.1:-76290526 | None:intergenic |
GTTGAAGTTGCGGCCATAGG+TGG | 0.568296 | 6.1:-76290625 | None:intergenic |
GACCACAGGTGTTGAAGTTG+CGG | 0.569006 | 6.1:-76290635 | None:intergenic |
CGAAGATGTATTGCAGGCAT+GGG | 0.569090 | 6.1:-76289475 | None:intergenic |
AAAAGAAGTTGACGTTGAGA+AGG | 0.569097 | 6.1:+76289278 | MS.gene059637:CDS |
TTTGACATCACCATTGCTAG+TGG | 0.569409 | 6.1:-76290494 | None:intergenic |
GTGCAGAAACCGGTTGGAGT+GGG | 0.569804 | 6.1:+76285093 | MS.gene059637:CDS |
TCGCAATTTCCTGACGGACA+AGG | 0.572247 | 6.1:+76289495 | MS.gene059637:CDS |
AACTGCAGGTGTTGAAGTTG+TGG | 0.572999 | 6.1:-76290569 | None:intergenic |
GTTGAAGTTGTGGCAATATG+TGG | 0.573718 | 6.1:-76290592 | None:intergenic |
CAGCAGGAAGCCACTAGCAA+TGG | 0.574156 | 6.1:+76290484 | MS.gene059637:CDS |
GCGGCCATAGGTGGAACTGC+AGG | 0.576630 | 6.1:-76290616 | None:intergenic |
TTAATGGCGGAAGGTGAAGG+AGG | 0.577062 | 6.1:+76284865 | None:intergenic |
TCAGGGAGCACGCGATAGCA+GGG | 0.577678 | 6.1:+76287178 | MS.gene059637:CDS |
GCGTCGGGAATATATTGTGA+TGG | 0.580424 | 6.1:+76287038 | MS.gene059637:CDS |
CCTGGTAATTCATGTTCAGA+TGG | 0.580857 | 6.1:+76289348 | MS.gene059637:CDS |
AGTTGACGTTGAGAAGGCTA+TGG | 0.583343 | 6.1:+76289284 | MS.gene059637:CDS |
GGTGCAGAAACCGGTTGGAG+TGG | 0.585730 | 6.1:+76285092 | MS.gene059637:CDS |
AATATTAATAAAACATCACA+AGG | 0.586663 | 6.1:+76287794 | MS.gene059637:CDS |
CAAACAGATAAAATCAGCCC+TGG | 0.591581 | 6.1:+76289330 | MS.gene059637:CDS |
TGAATTGTCTGCACCGGCGT+TGG | 0.592942 | 6.1:-76285141 | None:intergenic |
AACTGCAGGTGTTGAAGTTG+TGG | 0.593897 | 6.1:-76290602 | None:intergenic |
AATTCAACACTCTTCTGTGA+GGG | 0.594410 | 6.1:+76285158 | MS.gene059637:CDS |
AACTGCAGGTGTTGAAGTTG+CGG | 0.594681 | 6.1:-76290536 | None:intergenic |
ATTGATGGATCCTTGGCTGT+AGG | 0.596299 | 6.1:-76288083 | None:intergenic |
GTGGCCATAGGTGGAACTGC+AGG | 0.599317 | 6.1:-76290550 | None:intergenic |
ATAAATGTAGGAGGAGGCTG+GGG | 0.600017 | 6.1:+76287764 | MS.gene059637:intron |
GTTGAAGTTGTGGCCATAGG+TGG | 0.604086 | 6.1:-76290559 | None:intergenic |
CAAAGCTCCTTAAGGTGATG+TGG | 0.604962 | 6.1:-76288750 | None:intergenic |
CAATGTGTATCTTCAGCAAG+CGG | 0.607593 | 6.1:+76287968 | MS.gene059637:CDS |
GTCGAAACCGCAACAGCAGG+TGG | 0.610823 | 6.1:+76285050 | MS.gene059637:CDS |
ACAGTATCAATAGGGACCAC+AGG | 0.611364 | 6.1:-76290649 | None:intergenic |
GTGACGGTGCAGAAACCGGT+TGG | 0.612676 | 6.1:+76285087 | MS.gene059637:CDS |
ACCGGTACCAGTGCCAACGC+CGG | 0.613832 | 6.1:+76285128 | MS.gene059637:CDS |
GCTAAAGTCCCAGGAGACAT+CGG | 0.613977 | 6.1:-76289390 | None:intergenic |
GTGGCAATATGTGGAACTGC+AGG | 0.618160 | 6.1:-76290583 | None:intergenic |
TGTCAGGTGAACCTTGTCAA+AGG | 0.626849 | 6.1:+76288540 | MS.gene059637:intron |
TGCCTCGCTAGCTTCTTCGA+CGG | 0.628871 | 6.1:-76284997 | None:intergenic |
ACATCTTCGCAATTTCCTGA+CGG | 0.629950 | 6.1:+76289489 | MS.gene059637:CDS |
TCACCTGTCTCAAGTGCTCG+TGG | 0.630205 | 6.1:+76288585 | MS.gene059637:CDS |
ATTCTCAGAACAAAGAACGT+TGG | 0.631850 | 6.1:-76287871 | None:intergenic |
TATTAATAAAACATCACAAG+GGG | 0.635016 | 6.1:+76287796 | MS.gene059637:CDS |
GACAGGTGAAGCTGATGAGG+AGG | 0.635684 | 6.1:-76288571 | None:intergenic |
AGGGTGCTGGACCTTTGACA+AGG | 0.645508 | 6.1:-76288551 | None:intergenic |
TACCGTCGAAGAAGCTAGCG+AGG | 0.646483 | 6.1:+76284995 | MS.gene059637:CDS |
GGCCGCAACTTCAACACCTG+TGG | 0.647452 | 6.1:+76290633 | MS.gene059637:CDS |
GGTTCAACAGGGGAGTGTGA+CGG | 0.651746 | 6.1:+76285071 | MS.gene059637:CDS |
AACAGCAGGTGGTTCAACAG+GGG | 0.653532 | 6.1:+76285061 | MS.gene059637:CDS |
CAAATGCGACTGCGACGGCG+TGG | 0.660370 | 6.1:+76284965 | MS.gene059637:CDS |
CAATTCAACACTCTTCTGTG+AGG | 0.662812 | 6.1:+76285157 | MS.gene059637:CDS |
CAATGAAGCTGCTAGACGAG+AGG | 0.668933 | 6.1:+76287094 | MS.gene059637:CDS |
TGGAGGTGATGAAAAGCCGT+AGG | 0.674319 | 6.1:-76288021 | None:intergenic |
ATATTAATAAAACATCACAA+GGG | 0.678177 | 6.1:+76287795 | MS.gene059637:CDS |
CATCTGAACATGAATTACCA+GGG | 0.687920 | 6.1:-76289347 | None:intergenic |
TGACGGACAAGGAGTGACAG+AGG | 0.696697 | 6.1:+76289506 | MS.gene059637:CDS |
ACAGGTGAAGCTGATGAGGA+GGG | 0.698375 | 6.1:-76288570 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATTATTTTTATGTCTTTAA+AGG | + | chr6.1:76288850-76288869 | MS.gene059637:intron | 10.0% |
!! | AATATTAATAAAACATCACA+AGG | + | chr6.1:76287794-76287813 | MS.gene059637:CDS | 15.0% |
!! | AATTATGATAAAGTTTCATA+CGG | - | chr6.1:76289041-76289060 | None:intergenic | 15.0% |
!! | ATATTAATAAAACATCACAA+GGG | + | chr6.1:76287795-76287814 | MS.gene059637:CDS | 15.0% |
!! | ATTAAATTAAAAATAAGGAG+AGG | - | chr6.1:76289623-76289642 | None:intergenic | 15.0% |
!! | TAAAAAGGAAATATATTCTT+TGG | + | chr6.1:76286886-76286905 | MS.gene059637:intron | 15.0% |
!! | TCTTAAAAGTTATAGAAAAA+AGG | + | chr6.1:76287645-76287664 | MS.gene059637:intron | 15.0% |
!!! | ACATAAAAATAATTGATGAT+TGG | - | chr6.1:76288844-76288863 | None:intergenic | 15.0% |
!!! | TATATGTTTTTCAAAACTTA+GGG | - | chr6.1:76289736-76289755 | None:intergenic | 15.0% |
!!! | TTATATGTTTTTCAAAACTT+AGG | - | chr6.1:76289737-76289756 | None:intergenic | 15.0% |
!!! | TTTAATTGTATACACATTTT+AGG | + | chr6.1:76285758-76285777 | MS.gene059637:intron | 15.0% |
!!! | TTTTATATGATAGAACATTA+TGG | + | chr6.1:76287375-76287394 | MS.gene059637:intron | 15.0% |
!! | AAGAATATCAGAAAACATAA+CGG | - | chr6.1:76288877-76288896 | None:intergenic | 20.0% |
!! | AAGTGAATTAGAGAATAAAA+AGG | + | chr6.1:76290414-76290433 | MS.gene059637:CDS | 20.0% |
!! | GTTTATTTAAACTTAGGTAT+TGG | + | chr6.1:76288163-76288182 | MS.gene059637:intron | 20.0% |
!! | TATTAATAAAACATCACAAG+GGG | + | chr6.1:76287796-76287815 | MS.gene059637:CDS | 20.0% |
!! | TTAGCTGAATTATCATAAAA+AGG | + | chr6.1:76286871-76286890 | MS.gene059637:intron | 20.0% |
!! | TTAGTTAGAATCAATTATAG+AGG | + | chr6.1:76285570-76285589 | MS.gene059637:intron | 20.0% |
!! | TTGGAATCAAAATAACTTAT+AGG | - | chr6.1:76287282-76287301 | None:intergenic | 20.0% |
!! | TTGTTTCCTGAAAAATTAAA+GGG | - | chr6.1:76286264-76286283 | None:intergenic | 20.0% |
!! | TTTGTTTATATAGTATGCAT+AGG | + | chr6.1:76286788-76286807 | MS.gene059637:intron | 20.0% |
!!! | AATTGAAAATTTTCATGCTT+TGG | - | chr6.1:76289797-76289816 | None:intergenic | 20.0% |
!!! | ACTTTTAAGATCATATAAAG+AGG | - | chr6.1:76287635-76287654 | None:intergenic | 20.0% |
!!! | AGCAATTTTTAACAATATAG+TGG | - | chr6.1:76290348-76290367 | None:intergenic | 20.0% |
!!! | ATATGTTTTTCAAAACTTAG+GGG | - | chr6.1:76289735-76289754 | None:intergenic | 20.0% |
!!! | ATTGAAAATTTTCATGCTTT+GGG | - | chr6.1:76289796-76289815 | None:intergenic | 20.0% |
!!! | GAATTTTTTTTTAATGTGTC+AGG | + | chr6.1:76288524-76288543 | MS.gene059637:intron | 20.0% |
!!! | GTGTTTTTGAATTTTTGAAA+GGG | + | chr6.1:76285242-76285261 | MS.gene059637:intron | 20.0% |
!!! | GTTTTAATATTTGAGAATGT+AGG | + | chr6.1:76285734-76285753 | MS.gene059637:intron | 20.0% |
!!! | TGTGTTTTTGAATTTTTGAA+AGG | + | chr6.1:76285241-76285260 | MS.gene059637:intron | 20.0% |
! | AAAAGTAACTTCTGACTAAA+AGG | - | chr6.1:76290018-76290037 | None:intergenic | 25.0% |
! | AATTAAAGTACAGGTAATGT+TGG | + | chr6.1:76288640-76288659 | MS.gene059637:intron | 25.0% |
! | ACAACATACAATCAAAACTT+TGG | - | chr6.1:76285664-76285683 | None:intergenic | 25.0% |
! | ACAATTGTGTATGATTAGAT+TGG | + | chr6.1:76287242-76287261 | MS.gene059637:intron | 25.0% |
! | AGAATATCAGAAAACATAAC+GGG | - | chr6.1:76288876-76288895 | None:intergenic | 25.0% |
! | AGTTATAGAAAAAAGGTTTC+TGG | + | chr6.1:76287652-76287671 | MS.gene059637:intron | 25.0% |
! | ATCGGAGAAATATTAAACAA+CGG | + | chr6.1:76288190-76288209 | MS.gene059637:intron | 25.0% |
! | ATGTTAGTGTTATGAAATAG+CGG | - | chr6.1:76286129-76286148 | None:intergenic | 25.0% |
! | ATTCGTTTAAAAATCGTGTT+TGG | + | chr6.1:76285524-76285543 | MS.gene059637:intron | 25.0% |
! | CACTCATATATTAGAAGTTA+CGG | + | chr6.1:76285907-76285926 | MS.gene059637:intron | 25.0% |
! | CTCAATAGAGTTATTACTAT+GGG | + | chr6.1:76289576-76289595 | MS.gene059637:CDS | 25.0% |
! | CTTGTTTCCTGAAAAATTAA+AGG | - | chr6.1:76286265-76286284 | None:intergenic | 25.0% |
! | TACAGGGTTTATTTAAACTT+AGG | + | chr6.1:76288157-76288176 | MS.gene059637:intron | 25.0% |
! | TCTCAATAGAGTTATTACTA+TGG | + | chr6.1:76289575-76289594 | MS.gene059637:CDS | 25.0% |
! | TGAGACTTTGTAATTATCAA+GGG | + | chr6.1:76289905-76289924 | MS.gene059637:intron | 25.0% |
! | TGGTTATATGTATGAAATGA+AGG | + | chr6.1:76288660-76288679 | MS.gene059637:intron | 25.0% |
! | TTGCCAAAATGAAAAATTGA+CGG | - | chr6.1:76289707-76289726 | None:intergenic | 25.0% |
!! | AAAACACATTCAAGACTTTT+TGG | - | chr6.1:76287301-76287320 | None:intergenic | 25.0% |
!! | TATATAGTAAAGCATCTAAC+TGG | + | chr6.1:76286633-76286652 | MS.gene059637:intron | 25.0% |
!! | TCATATCGTCATTGTAATTT+TGG | + | chr6.1:76289673-76289692 | MS.gene059637:intron | 25.0% |
!! | TTGAAAATTTTCATGCTTTG+GGG | - | chr6.1:76289795-76289814 | None:intergenic | 25.0% |
!!! | AACTTAGGTATTGGTTAAAT+CGG | + | chr6.1:76288172-76288191 | MS.gene059637:intron | 25.0% |
!!! | AGTCTTGAATGTGTTTTTAT+TGG | + | chr6.1:76287304-76287323 | MS.gene059637:intron | 25.0% |
!!! | ATTTCAATTTTTTTGCTGAC+TGG | + | chr6.1:76287731-76287750 | MS.gene059637:intron | 25.0% |
!!! | ATTTTGACAATAAATGTAGG+AGG | + | chr6.1:76287755-76287774 | MS.gene059637:intron | 25.0% |
!!! | CAAAACTTTGGTTTCAATTT+TGG | - | chr6.1:76285652-76285671 | None:intergenic | 25.0% |
!!! | CTTTCTAGTTTTAAATCCTA+AGG | + | chr6.1:76288344-76288363 | MS.gene059637:intron | 25.0% |
!!! | GCTTACTTGATTATTTTTGT+AGG | + | chr6.1:76288703-76288722 | MS.gene059637:intron | 25.0% |
!!! | GGTATTTTGACAATAAATGT+AGG | + | chr6.1:76287752-76287771 | MS.gene059637:intron | 25.0% |
!!! | GTTGTTGTTTAGAAACTTAA+GGG | + | chr6.1:76287448-76287467 | MS.gene059637:intron | 25.0% |
!!! | GTTTAATTTTCTGAATTGAC+TGG | + | chr6.1:76287577-76287596 | MS.gene059637:intron | 25.0% |
!!! | TAACTACCCTTTAATTTTTC+AGG | + | chr6.1:76286255-76286274 | MS.gene059637:intron | 25.0% |
!!! | TACCTGTACTTTAATTTTGA+TGG | - | chr6.1:76288636-76288655 | None:intergenic | 25.0% |
!!! | TATGTTTTTCAAAACTTAGG+GGG | - | chr6.1:76289734-76289753 | None:intergenic | 25.0% |
!!! | TGTATACACATTTTAGGTAA+CGG | + | chr6.1:76285764-76285783 | MS.gene059637:intron | 25.0% |
!!! | TGTTGTTGTTTAGAAACTTA+AGG | + | chr6.1:76287447-76287466 | MS.gene059637:intron | 25.0% |
!!! | TTAATTTGTCTCTATACCTT+AGG | - | chr6.1:76288363-76288382 | None:intergenic | 25.0% |
!!! | TTTTTGAAAGGGTTTTTGTT+TGG | + | chr6.1:76285253-76285272 | MS.gene059637:intron | 25.0% |
AACACTTGTAGAGTAATCAT+TGG | - | chr6.1:76289836-76289855 | None:intergenic | 30.0% | |
AGAAAAGGAAACACAATCAA+TGG | - | chr6.1:76289146-76289165 | None:intergenic | 30.0% | |
AGACTTTGTAATTATCAAGG+GGG | + | chr6.1:76289907-76289926 | MS.gene059637:intron | 30.0% | |
ATCAAAGAAAAGAAAAGGTC+AGG | + | chr6.1:76288046-76288065 | MS.gene059637:CDS | 30.0% | |
ATTACTATGGGAGAGATAAA+TGG | + | chr6.1:76289588-76289607 | MS.gene059637:CDS | 30.0% | |
ATTGATACTGTAGCTGAAAA+TGG | + | chr6.1:76290661-76290680 | MS.gene059637:CDS | 30.0% | |
CAATGCCATTAGAAAGAATT+CGG | + | chr6.1:76290092-76290111 | MS.gene059637:intron | 30.0% | |
CACTTAGTGAATTTAGGTAA+CGG | + | chr6.1:76285808-76285827 | MS.gene059637:intron | 30.0% | |
CTGAGACTTTGTAATTATCA+AGG | + | chr6.1:76289904-76289923 | MS.gene059637:intron | 30.0% | |
CTTATTCAACTAAGTGATGT+CGG | - | chr6.1:76287420-76287439 | None:intergenic | 30.0% | |
GAGACTTTGTAATTATCAAG+GGG | + | chr6.1:76289906-76289925 | MS.gene059637:intron | 30.0% | |
GGCTAATGAGAAAATATGAA+GGG | - | chr6.1:76290327-76290346 | None:intergenic | 30.0% | |
GTCCATCAAAATTAAAGTAC+AGG | + | chr6.1:76288631-76288650 | MS.gene059637:CDS | 30.0% | |
TATACACTAGTACAGAATTG+TGG | - | chr6.1:76286558-76286577 | None:intergenic | 30.0% | |
TCAATAAGCTGAAAGTTGAA+GGG | + | chr6.1:76289943-76289962 | MS.gene059637:intron | 30.0% | |
TGAATGTGTGTGCATTATAA+CGG | + | chr6.1:76288999-76289018 | MS.gene059637:intron | 30.0% | |
TGGCTAATGAGAAAATATGA+AGG | - | chr6.1:76290328-76290347 | None:intergenic | 30.0% | |
TTACCTAAATTCACTAAGTG+CGG | - | chr6.1:76285808-76285827 | None:intergenic | 30.0% | |
TTATGAAAACAGGAAATGCA+TGG | - | chr6.1:76288959-76288978 | None:intergenic | 30.0% | |
TTCAATAAGCTGAAAGTTGA+AGG | + | chr6.1:76289942-76289961 | MS.gene059637:intron | 30.0% | |
TTCATTAAGTGTCTGATACA+CGG | - | chr6.1:76287691-76287710 | None:intergenic | 30.0% | |
TTTCAGCTACAGTATCAATA+GGG | - | chr6.1:76290660-76290679 | None:intergenic | 30.0% | |
TTTCCAGTTTCATTGTTGAT+TGG | - | chr6.1:76290442-76290461 | None:intergenic | 30.0% | |
! | AGACCGTCAATTTTTCATTT+TGG | + | chr6.1:76289701-76289720 | MS.gene059637:intron | 30.0% |
! | ATATTGTGAATGTTTTGCGT+CGG | + | chr6.1:76287022-76287041 | MS.gene059637:CDS | 30.0% |
! | CATTTCCTGTTTTCATAATC+AGG | + | chr6.1:76288961-76288980 | MS.gene059637:intron | 30.0% |
! | TCATACGGTGAAGTTTTTAT+TGG | - | chr6.1:76289026-76289045 | None:intergenic | 30.0% |
! | TTTTCAGCTACAGTATCAAT+AGG | - | chr6.1:76290661-76290680 | None:intergenic | 30.0% |
!! | AACACTTTGTCTCTGAAATT+GGG | - | chr6.1:76290381-76290400 | None:intergenic | 30.0% |
!! | ACAATCAATGGTTCTGAAAA+AGG | - | chr6.1:76289134-76289153 | None:intergenic | 30.0% |
!! | GTGTATGATTAGATTGGTTT+AGG | + | chr6.1:76287248-76287267 | MS.gene059637:intron | 30.0% |
!! | TCTTTTGTTGTATGAATGAC+TGG | + | chr6.1:76288893-76288912 | MS.gene059637:intron | 30.0% |
!! | TGATTTTAATGCGATGTTGA+TGG | + | chr6.1:76285023-76285042 | MS.gene059637:CDS | 30.0% |
!!! | TGTTTGTTTTATCTCTCCTT+TGG | + | chr6.1:76286926-76286945 | MS.gene059637:intron | 30.0% |
AAAAGAAGTTGACGTTGAGA+AGG | + | chr6.1:76289278-76289297 | MS.gene059637:CDS | 35.0% | |
AAATTGCGAAGATGTATTGC+AGG | - | chr6.1:76289484-76289503 | None:intergenic | 35.0% | |
AAGCAGGATACCTTTATTGA+AGG | - | chr6.1:76290122-76290141 | None:intergenic | 35.0% | |
AATTCAACACTCTTCTGTGA+GGG | + | chr6.1:76285158-76285177 | MS.gene059637:CDS | 35.0% | |
ACAGTGAATTATACCATGAC+TGG | - | chr6.1:76285955-76285974 | None:intergenic | 35.0% | |
ACTTCTACTGTGTATAGTCA+TGG | + | chr6.1:76286819-76286838 | MS.gene059637:intron | 35.0% | |
AGCAGGATACCTTTATTGAA+GGG | - | chr6.1:76290121-76290140 | None:intergenic | 35.0% | |
AGCATTCACAGTACTTCTTA+AGG | - | chr6.1:76287845-76287864 | None:intergenic | 35.0% | |
AGCGTAATCCAAATGCATTT+AGG | + | chr6.1:76287135-76287154 | MS.gene059637:CDS | 35.0% | |
AGGCAAAAGCAATTCTACAT+GGG | + | chr6.1:76285590-76285609 | MS.gene059637:intron | 35.0% | |
ATCAGACCAGAAAAAAACAG+TGG | + | chr6.1:76289188-76289207 | MS.gene059637:intron | 35.0% | |
ATGAAGTGTAACAGCCAATA+AGG | - | chr6.1:76286973-76286992 | None:intergenic | 35.0% | |
ATTCGGATTCCCTTCAATAA+AGG | + | chr6.1:76290109-76290128 | MS.gene059637:intron | 35.0% | |
ATTCTCAGAACAAAGAACGT+TGG | - | chr6.1:76287874-76287893 | None:intergenic | 35.0% | |
ATTGGAGCATATAGCGTTTA+GGG | + | chr6.1:76287322-76287341 | MS.gene059637:intron | 35.0% | |
CAAACGATCAATCAGTTGAT+AGG | - | chr6.1:76286761-76286780 | None:intergenic | 35.0% | |
CAGTGAATTATACCATGACT+GGG | - | chr6.1:76285954-76285973 | None:intergenic | 35.0% | |
CATCTGAACATGAATTACCA+GGG | - | chr6.1:76289350-76289369 | None:intergenic | 35.0% | |
CATTGAAAGAAACACACACA+CGG | - | chr6.1:76286414-76286433 | None:intergenic | 35.0% | |
CATTTGTCATAGCACCTTAT+TGG | + | chr6.1:76286956-76286975 | MS.gene059637:intron | 35.0% | |
CCAGCATCAAAGAAAAGAAA+AGG | + | chr6.1:76288041-76288060 | MS.gene059637:CDS | 35.0% | |
CCTTCTTTCACTTCAAAGTT+AGG | - | chr6.1:76286311-76286330 | None:intergenic | 35.0% | |
CGACATCACTTAGTTGAATA+AGG | + | chr6.1:76287418-76287437 | MS.gene059637:intron | 35.0% | |
CTTCTACTGTGTATAGTCAT+GGG | + | chr6.1:76286820-76286839 | MS.gene059637:intron | 35.0% | |
GATCCAATCAACAATGAAAC+TGG | + | chr6.1:76290436-76290455 | MS.gene059637:CDS | 35.0% | |
GCTAAATTTGAGCCTAACTT+TGG | - | chr6.1:76286856-76286875 | None:intergenic | 35.0% | |
GGAATCCGAATTCTTTCTAA+TGG | - | chr6.1:76290100-76290119 | None:intergenic | 35.0% | |
TAACCGCACTTAGTGAATTT+AGG | + | chr6.1:76285802-76285821 | MS.gene059637:intron | 35.0% | |
TAATTCACTGTTTGCAATCG+CGG | + | chr6.1:76285964-76285983 | MS.gene059637:intron | 35.0% | |
TATAGATAGTCTGCTTTCCA+TGG | + | chr6.1:76290069-76290088 | MS.gene059637:intron | 35.0% | |
TATTGGAGCATATAGCGTTT+AGG | + | chr6.1:76287321-76287340 | MS.gene059637:intron | 35.0% | |
TCAAAGTTAGGTCTTGATCT+TGG | - | chr6.1:76286299-76286318 | None:intergenic | 35.0% | |
TCACTTAGTTGAATAAGGCT+TGG | + | chr6.1:76287423-76287442 | MS.gene059637:intron | 35.0% | |
TCCAAAGAATGTTGTTCATC+CGG | + | chr6.1:76284897-76284916 | MS.gene059637:CDS | 35.0% | |
TCTTCACGAGGATTATATGT+TGG | + | chr6.1:76285696-76285715 | MS.gene059637:intron | 35.0% | |
TTAGGTCTTGATCTTGGTTT+GGG | - | chr6.1:76286293-76286312 | None:intergenic | 35.0% | |
TTGACAATAAATGTAGGAGG+AGG | + | chr6.1:76287758-76287777 | MS.gene059637:intron | 35.0% | |
TTGTTAGATACGAACGTGAA+TGG | - | chr6.1:76287524-76287543 | None:intergenic | 35.0% | |
TTTGTACTTCAAAGGACAAC+AGG | - | chr6.1:76286583-76286602 | None:intergenic | 35.0% | |
! | AAAAGTGAGTTGAACTGAAG+AGG | + | chr6.1:76285485-76285504 | MS.gene059637:intron | 35.0% |
! | AGAAAAAAGGTTTCTGGACT+TGG | + | chr6.1:76287658-76287677 | MS.gene059637:intron | 35.0% |
! | AGAGACAAAGTGTTCTTCAT+TGG | + | chr6.1:76290387-76290406 | MS.gene059637:intron | 35.0% |
! | ATTTTGGGCCTAAATGCATT+TGG | - | chr6.1:76287146-76287165 | None:intergenic | 35.0% |
! | CCTTTTCTTTTCTTTGATGC+TGG | - | chr6.1:76288044-76288063 | None:intergenic | 35.0% |
! | GAACGATCTAGATTCAAGTT+CGG | - | chr6.1:76290231-76290250 | None:intergenic | 35.0% |
! | TAAGTAGGTCTAGCATTTTG+TGG | + | chr6.1:76287201-76287220 | MS.gene059637:intron | 35.0% |
! | TATTGTGAATGTTTTGCGTC+GGG | + | chr6.1:76287023-76287042 | MS.gene059637:CDS | 35.0% |
! | TGGTTTCAATTTTGGATGAG+AGG | - | chr6.1:76285644-76285663 | None:intergenic | 35.0% |
! | TTCTGAGAATTGTAGATGCA+TGG | + | chr6.1:76287884-76287903 | MS.gene059637:CDS | 35.0% |
! | TTTCTTTTCTTTGATGCTGG+AGG | - | chr6.1:76288041-76288060 | None:intergenic | 35.0% |
! | TTTGACAAGCAACTGTCTTT+TGG | + | chr6.1:76286224-76286243 | MS.gene059637:intron | 35.0% |
!! | AATAAAGGTATCCTGCTTTC+AGG | + | chr6.1:76290124-76290143 | MS.gene059637:intron | 35.0% |
!! | ACGTCAACTTCTTTTTGACT+CGG | - | chr6.1:76289273-76289292 | None:intergenic | 35.0% |
!! | CCTAACTTTGAAGTGAAAGA+AGG | + | chr6.1:76286308-76286327 | MS.gene059637:CDS | 35.0% |
!! | CGTGTTGATTTGTACTTCAA+AGG | - | chr6.1:76286591-76286610 | None:intergenic | 35.0% |
!! | GAACACTTTGTCTCTGAAAT+TGG | - | chr6.1:76290382-76290401 | None:intergenic | 35.0% |
!! | TATTTGCTATCTGCAGACTA+TGG | + | chr6.1:76288441-76288460 | MS.gene059637:intron | 35.0% |
!! | TGTTCATCCGGAATTTGTTA+CGG | + | chr6.1:76284909-76284928 | MS.gene059637:CDS | 35.0% |
!!! | AAATTTTCATGCTTTGGGGA+AGG | - | chr6.1:76289791-76289810 | None:intergenic | 35.0% |
!!! | GCTTTTCCACTGTTTTTTTC+TGG | - | chr6.1:76289197-76289216 | None:intergenic | 35.0% |
!!! | TTTAGGTAACGGATTTTCAG+CGG | + | chr6.1:76285775-76285794 | MS.gene059637:intron | 35.0% |
AAGGTCAGGAACTCTTCTTA+TGG | + | chr6.1:76288060-76288079 | MS.gene059637:CDS | 40.0% | |
AATAAATGTAGGAGGAGGCT+GGG | + | chr6.1:76287763-76287782 | MS.gene059637:intron | 40.0% | |
AATGTATCGTGTTCTTCACG+AGG | + | chr6.1:76285684-76285703 | MS.gene059637:intron | 40.0% | |
ACATCTTCGCAATTTCCTGA+CGG | + | chr6.1:76289489-76289508 | MS.gene059637:CDS | 40.0% | |
AGACTATGGTGAATGGTATC+AGG | + | chr6.1:76288455-76288474 | MS.gene059637:intron | 40.0% | |
ATCTTGTTCGTCACACATCA+AGG | - | chr6.1:76289415-76289434 | None:intergenic | 40.0% | |
ATGTCCAGACTGAGTGAATA+TGG | + | chr6.1:76290273-76290292 | MS.gene059637:intron | 40.0% | |
CAAACAGATAAAATCAGCCC+TGG | + | chr6.1:76289330-76289349 | MS.gene059637:CDS | 40.0% | |
CAATGTGTATCTTCAGCAAG+CGG | + | chr6.1:76287968-76287987 | MS.gene059637:CDS | 40.0% | |
CAATTCAACACTCTTCTGTG+AGG | + | chr6.1:76285157-76285176 | MS.gene059637:CDS | 40.0% | |
CCATCTGAACATGAATTACC+AGG | - | chr6.1:76289351-76289370 | None:intergenic | 40.0% | |
CCTGGTAATTCATGTTCAGA+TGG | + | chr6.1:76289348-76289367 | MS.gene059637:CDS | 40.0% | |
CGTGGTACAAATCCAACATT+AGG | + | chr6.1:76288603-76288622 | MS.gene059637:CDS | 40.0% | |
CGTGTGTGTGTTTCTTTCAA+TGG | + | chr6.1:76286412-76286431 | MS.gene059637:intron | 40.0% | |
CTACAGCAAAATTCCTGTCA+TGG | - | chr6.1:76286700-76286719 | None:intergenic | 40.0% | |
CTGAGAATCACACTAAGGAT+CGG | + | chr6.1:76289105-76289124 | MS.gene059637:intron | 40.0% | |
CTGATGTACTATCTCAGTAC+TGG | - | chr6.1:76290467-76290486 | None:intergenic | 40.0% | |
GAACTGAACAAAGCTCCTTA+AGG | - | chr6.1:76288761-76288780 | None:intergenic | 40.0% | |
GACTGTGTTTAGTGTGTGTT+TGG | + | chr6.1:76285433-76285452 | MS.gene059637:intron | 40.0% | |
GAGGCAAAAGCAATTCTACA+TGG | + | chr6.1:76285589-76285608 | MS.gene059637:intron | 40.0% | |
GATTATGCACTAGAGTCTAG+AGG | - | chr6.1:76289067-76289086 | None:intergenic | 40.0% | |
GCTTGTCAAAACACAAAGAC+AGG | - | chr6.1:76286214-76286233 | None:intergenic | 40.0% | |
GGATGAACAACATTCTTTGG+AGG | - | chr6.1:76284898-76284917 | None:intergenic | 40.0% | |
GTCGTAACCGTAACAAATTC+CGG | - | chr6.1:76284919-76284938 | None:intergenic | 40.0% | |
GTGAGCCTGATTATGAAAAC+AGG | - | chr6.1:76288969-76288988 | None:intergenic | 40.0% | |
GTTAGGTCTTGATCTTGGTT+TGG | - | chr6.1:76286294-76286313 | None:intergenic | 40.0% | |
GTTGAAGTTGTGGCAATATG+TGG | - | chr6.1:76290595-76290614 | None:intergenic | 40.0% | |
TAAAGATAGGGGCAATGGTT+TGG | + | chr6.1:76289975-76289994 | MS.gene059637:intron | 40.0% | |
TACTGAGATAGTACATCAGC+AGG | + | chr6.1:76290468-76290487 | MS.gene059637:CDS | 40.0% | |
TATCTGCAGACTATGGTGAA+TGG | + | chr6.1:76288448-76288467 | MS.gene059637:intron | 40.0% | |
TATTCACTCAGTCTGGACAT+CGG | - | chr6.1:76290273-76290292 | None:intergenic | 40.0% | |
TCACGAGGATTATATGTTGG+CGG | + | chr6.1:76285699-76285718 | MS.gene059637:intron | 40.0% | |
TCCGGATGAACAACATTCTT+TGG | - | chr6.1:76284901-76284920 | None:intergenic | 40.0% | |
TCTTTCTAATGGCATTGCCA+TGG | - | chr6.1:76290089-76290108 | None:intergenic | 40.0% | |
TGACTGGTATTAACCTAGAG+AGG | + | chr6.1:76288909-76288928 | MS.gene059637:intron | 40.0% | |
TGGAAAAGTGACACGTATAG+AGG | - | chr6.1:76288939-76288958 | None:intergenic | 40.0% | |
TGTCCAGACTGAGTGAATAT+GGG | + | chr6.1:76290274-76290293 | MS.gene059637:intron | 40.0% | |
TTTGACATCACCATTGCTAG+TGG | - | chr6.1:76290497-76290516 | None:intergenic | 40.0% | |
! | AAGGGAAATTGGTGGTCATT+CGG | + | chr6.1:76290151-76290170 | MS.gene059637:intron | 40.0% |
! | AAGGTACTCCAAAGAAGCAA+AGG | + | chr6.1:76286327-76286346 | MS.gene059637:CDS | 40.0% |
! | AGGGTCAAAGCACTAAAGAT+AGG | + | chr6.1:76289962-76289981 | MS.gene059637:intron | 40.0% |
! | ATGGACTGCAAGAACTTTGA+GGG | + | chr6.1:76287903-76287922 | MS.gene059637:CDS | 40.0% |
! | ATTTGTTACGGTTACGACTG+CGG | + | chr6.1:76284921-76284940 | MS.gene059637:CDS | 40.0% |
! | CTCTTTTTCCATCTTCAGCT+TGG | - | chr6.1:76290692-76290711 | None:intergenic | 40.0% |
! | CTTGCTAATTGATGGATCCT+TGG | - | chr6.1:76288093-76288112 | None:intergenic | 40.0% |
! | GCAAATTTTACCTGTTGTCC+CGG | - | chr6.1:76288116-76288135 | None:intergenic | 40.0% |
! | GGGTCAAAGCACTAAAGATA+GGG | + | chr6.1:76289963-76289982 | MS.gene059637:intron | 40.0% |
! | GGTCAAAGCACTAAAGATAG+GGG | + | chr6.1:76289964-76289983 | MS.gene059637:intron | 40.0% |
! | TCAGTTCTGGTACTAGTATC+TGG | + | chr6.1:76288774-76288793 | MS.gene059637:CDS | 40.0% |
! | TTACTATGTCGACTAGAGAC+TGG | - | chr6.1:76288221-76288240 | None:intergenic | 40.0% |
! | TTTTATCTCTCCTTTGGCAG+AGG | + | chr6.1:76286932-76286951 | MS.gene059637:intron | 40.0% |
!! | CTCTTGAGTTGATGAAGCAA+GGG | - | chr6.1:76289244-76289263 | None:intergenic | 40.0% |
!! | GGGTGCCATTGTAAAAAATC+TGG | + | chr6.1:76287816-76287835 | MS.gene059637:CDS | 40.0% |
!! | TAAGGAGCTTTGTTCAGTTC+TGG | + | chr6.1:76288761-76288780 | MS.gene059637:CDS | 40.0% |
!!! | GGCAGCCAGATTTTTTACAA+TGG | - | chr6.1:76287824-76287843 | None:intergenic | 40.0% |
AACACTCTTCTGTGAGGGTT+GGG | + | chr6.1:76285163-76285182 | MS.gene059637:CDS | 45.0% | |
AATTCCTGTCATGGCAAGGT+CGG | - | chr6.1:76286691-76286710 | None:intergenic | 45.0% | |
ACAGTATCAATAGGGACCAC+AGG | - | chr6.1:76290652-76290671 | None:intergenic | 45.0% | |
AGCACTAAAGATAGGGGCAA+TGG | + | chr6.1:76289970-76289989 | MS.gene059637:intron | 45.0% | |
AGTGTGTGCATAGCATGTAC+TGG | + | chr6.1:76286478-76286497 | MS.gene059637:intron | 45.0% | |
AGTTGACGTTGAGAAGGCTA+TGG | + | chr6.1:76289284-76289303 | MS.gene059637:CDS | 45.0% | |
ATAAATGTAGGAGGAGGCTG+GGG | + | chr6.1:76287764-76287783 | MS.gene059637:intron | 45.0% | |
ATGGGGAATCCATGACTACT+AGG | + | chr6.1:76290292-76290311 | MS.gene059637:intron | 45.0% | |
ATGTAGCTCCCTAGTAGTCA+TGG | - | chr6.1:76290304-76290323 | None:intergenic | 45.0% | |
CAAAGCTCCTTAAGGTGATG+TGG | - | chr6.1:76288753-76288772 | None:intergenic | 45.0% | |
CAAAGCTGCATTTCCACCTA+TGG | + | chr6.1:76290513-76290532 | MS.gene059637:CDS | 45.0% | |
CAATAAATGTAGGAGGAGGC+TGG | + | chr6.1:76287762-76287781 | MS.gene059637:intron | 45.0% | |
CACGAGGATTATATGTTGGC+GGG | + | chr6.1:76285700-76285719 | MS.gene059637:intron | 45.0% | |
CAGAGCTGAGAATCACACTA+AGG | + | chr6.1:76289100-76289119 | MS.gene059637:intron | 45.0% | |
CATCTTCGCAAGAAGTTGGA+TGG | + | chr6.1:76287548-76287567 | MS.gene059637:intron | 45.0% | |
CGAAGATGTATTGCAGGCAT+GGG | - | chr6.1:76289478-76289497 | None:intergenic | 45.0% | |
CGGTAGTCATTCGATCAAGA+TGG | - | chr6.1:76290253-76290272 | None:intergenic | 45.0% | |
GAACAGAGTGTGTCAAACAG+CGG | - | chr6.1:76286052-76286071 | None:intergenic | 45.0% | |
GATCCATCAATTAGCAAGCC+GGG | + | chr6.1:76288095-76288114 | MS.gene059637:CDS | 45.0% | |
GCAAAATTCCTGTCATGGCA+AGG | - | chr6.1:76286695-76286714 | None:intergenic | 45.0% | |
GCAAGAAGTTGGATGGTTTC+TGG | + | chr6.1:76287555-76287574 | MS.gene059637:intron | 45.0% | |
GCGTCGGGAATATATTGTGA+TGG | + | chr6.1:76287038-76287057 | MS.gene059637:CDS | 45.0% | |
GCTCATTGCACAAGTAGTAC+TGG | + | chr6.1:76288134-76288153 | MS.gene059637:intron | 45.0% | |
GGAACCAATAGCTCCAGTTA+TGG | - | chr6.1:76288003-76288022 | None:intergenic | 45.0% | |
GGATCCATCAATTAGCAAGC+CGG | + | chr6.1:76288094-76288113 | MS.gene059637:CDS | 45.0% | |
GGGAAATTCATACCCACTGT+GGG | - | chr6.1:76286660-76286679 | None:intergenic | 45.0% | |
GTATAGAGGAAAGCCTCTCT+AGG | - | chr6.1:76288925-76288944 | None:intergenic | 45.0% | |
GTATAGTCATGGGTTTCCCA+TGG | + | chr6.1:76286830-76286849 | MS.gene059637:intron | 45.0% | |
GTCCAGACTGAGTGAATATG+GGG | + | chr6.1:76290275-76290294 | MS.gene059637:intron | 45.0% | |
GTTACGGCTTGAAGTGAAGT+AGG | + | chr6.1:76285923-76285942 | MS.gene059637:intron | 45.0% | |
TGACAAATGACCTCTGCCAA+AGG | - | chr6.1:76286945-76286964 | None:intergenic | 45.0% | |
TGCACATCTTCGCAAGAAGT+TGG | + | chr6.1:76287544-76287563 | MS.gene059637:intron | 45.0% | |
TGGAGAATCCAAGCTGAAGA+TGG | + | chr6.1:76290681-76290700 | MS.gene059637:CDS | 45.0% | |
TGGGGAATCCATGACTACTA+GGG | + | chr6.1:76290293-76290312 | MS.gene059637:intron | 45.0% | |
TGTACAGCCACATCACCTTA+AGG | + | chr6.1:76288743-76288762 | MS.gene059637:CDS | 45.0% | |
TGTCAGGTGAACCTTGTCAA+AGG | + | chr6.1:76288540-76288559 | MS.gene059637:intron | 45.0% | |
TTCCCCATATTCACTCAGTC+TGG | - | chr6.1:76290280-76290299 | None:intergenic | 45.0% | |
TTGAGCCTAACTTTGGCCAT+GGG | - | chr6.1:76286849-76286868 | None:intergenic | 45.0% | |
TTGCACTGCCTTTGCTTCTT+TGG | - | chr6.1:76286338-76286357 | None:intergenic | 45.0% | |
TTTCAGGCAGCAAGGGAAAT+TGG | + | chr6.1:76290140-76290159 | MS.gene059637:intron | 45.0% | |
TTTGAGCCTAACTTTGGCCA+TGG | - | chr6.1:76286850-76286869 | None:intergenic | 45.0% | |
! | ACTAAGTGATGTCGGCTACA+TGG | - | chr6.1:76287412-76287431 | None:intergenic | 45.0% |
! | ATTGATGGATCCTTGGCTGT+AGG | - | chr6.1:76288086-76288105 | None:intergenic | 45.0% |
! | CAGAACAAAGAACGTTGGCT+TGG | - | chr6.1:76287869-76287888 | None:intergenic | 45.0% |
! | CATGGACTGCAAGAACTTTG+AGG | + | chr6.1:76287902-76287921 | MS.gene059637:CDS | 45.0% |
! | GATGGACTCTGACCTAATGT+TGG | - | chr6.1:76288618-76288637 | None:intergenic | 45.0% |
! | TAGGTCTAGCATTTTGTGGC+AGG | + | chr6.1:76287205-76287224 | MS.gene059637:intron | 45.0% |
!! | AACTGCAGGTGTTGAAGTTG+CGG | - | chr6.1:76290539-76290558 | None:intergenic | 45.0% |
!! | AACTGCAGGTGTTGAAGTTG+TGG | - | chr6.1:76290539-76290558 | None:intergenic | 45.0% |
!! | ACTGGAGCTATTGGTTCCTA+CGG | + | chr6.1:76288005-76288024 | MS.gene059637:CDS | 45.0% |
!! | GAGTGTTGAATTGTCTGCAC+CGG | - | chr6.1:76285150-76285169 | None:intergenic | 45.0% |
!! | GCACAAGTAGTACTGGTACA+GGG | + | chr6.1:76288141-76288160 | MS.gene059637:intron | 45.0% |
!! | GCTCTTGAGTTGATGAAGCA+AGG | - | chr6.1:76289245-76289264 | None:intergenic | 45.0% |
!! | TGCACAAGTAGTACTGGTAC+AGG | + | chr6.1:76288140-76288159 | MS.gene059637:intron | 45.0% |
!! | GTAAAATTAAATTAAAAATA+AGG | - | chr6.1:76289628-76289647 | None:intergenic | 5.0% |
!!! | AAAATTTATTTGTTTTTAAT+AGG | - | chr6.1:76286734-76286753 | None:intergenic | 5.0% |
!!! | AAATTTATTTGTTTTTAATA+GGG | - | chr6.1:76286733-76286752 | None:intergenic | 5.0% |
!!! | TTTTAATTTAATTTTACATT+TGG | + | chr6.1:76289631-76289650 | MS.gene059637:intron | 5.0% |
AAAATTGCGAGCAGCCCTCA+GGG | + | chr6.1:76287161-76287180 | MS.gene059637:CDS | 50.0% | |
AACACCTGCAGTTCCACCTA+TGG | + | chr6.1:76290546-76290565 | MS.gene059637:CDS | 50.0% | |
AACAGCAGGTGGTTCAACAG+GGG | + | chr6.1:76285061-76285080 | MS.gene059637:CDS | 50.0% | |
AAGTAGGCACTTCCCAGTCA+TGG | + | chr6.1:76285939-76285958 | MS.gene059637:intron | 50.0% | |
AATTAGCAAGCCGGGACAAC+AGG | + | chr6.1:76288103-76288122 | MS.gene059637:CDS | 50.0% | |
ACAGGTGAAGCTGATGAGGA+GGG | - | chr6.1:76288573-76288592 | None:intergenic | 50.0% | |
ACTGGCGCATGTTCTCACAT+TGG | + | chr6.1:76286496-76286515 | MS.gene059637:intron | 50.0% | |
ATCCTGCTTTCAGGCAGCAA+GGG | + | chr6.1:76290133-76290152 | MS.gene059637:intron | 50.0% | |
CAACACTCTTCTGTGAGGGT+TGG | + | chr6.1:76285162-76285181 | MS.gene059637:CDS | 50.0% | |
CAACAGCAGGTGGTTCAACA+GGG | + | chr6.1:76285060-76285079 | MS.gene059637:CDS | 50.0% | |
CAATGAAGCTGCTAGACGAG+AGG | + | chr6.1:76287094-76287113 | MS.gene059637:CDS | 50.0% | |
CACATCAAGGCTAAAGTCCC+AGG | - | chr6.1:76289402-76289421 | None:intergenic | 50.0% | |
CATCTAACTGGACCCACAGT+GGG | + | chr6.1:76286645-76286664 | MS.gene059637:intron | 50.0% | |
CGAAAAGACCGATGTCTCCT+GGG | + | chr6.1:76289382-76289401 | MS.gene059637:CDS | 50.0% | |
CGGGAAATTCATACCCACTG+TGG | - | chr6.1:76286661-76286680 | None:intergenic | 50.0% | |
CTTCTTATGGCCTACAGCCA+AGG | + | chr6.1:76288073-76288092 | MS.gene059637:CDS | 50.0% | |
GCGAAGATGTATTGCAGGCA+TGG | - | chr6.1:76289479-76289498 | None:intergenic | 50.0% | |
GCTAAAGTCCCAGGAGACAT+CGG | - | chr6.1:76289393-76289412 | None:intergenic | 50.0% | |
GCTGCCATAACTGGAGCTAT+TGG | + | chr6.1:76287996-76288015 | MS.gene059637:CDS | 50.0% | |
GGTTTCCCATGGCCAAAGTT+AGG | + | chr6.1:76286841-76286860 | MS.gene059637:intron | 50.0% | |
GTGGCAATATGTGGAACTGC+AGG | - | chr6.1:76290586-76290605 | None:intergenic | 50.0% | |
GTGTCAAACAGCGGCTATAG+TGG | - | chr6.1:76286043-76286062 | None:intergenic | 50.0% | |
GTTGAAGTTGTGGCCATAGG+TGG | - | chr6.1:76290562-76290581 | None:intergenic | 50.0% | |
TATCCTGCTTTCAGGCAGCA+AGG | + | chr6.1:76290132-76290151 | MS.gene059637:intron | 50.0% | |
TGAGACAGGTGAAGCTGATG+AGG | - | chr6.1:76288577-76288596 | None:intergenic | 50.0% | |
TGAGGGAAGTGAAGAGAGAC+AGG | + | chr6.1:76287920-76287939 | MS.gene059637:CDS | 50.0% | |
TGGAGGTGATGAAAAGCCGT+AGG | - | chr6.1:76288024-76288043 | None:intergenic | 50.0% | |
TGTTGAACCACCTGCTGTTG+CGG | - | chr6.1:76285060-76285079 | None:intergenic | 50.0% | |
! | CAGGAGACATCGGTCTTTTC+GGG | - | chr6.1:76289383-76289402 | None:intergenic | 50.0% |
! | CCAGGAGACATCGGTCTTTT+CGG | - | chr6.1:76289384-76289403 | None:intergenic | 50.0% |
! | CTGTTTGCAATCGCGGATTG+TGG | + | chr6.1:76285971-76285990 | MS.gene059637:intron | 50.0% |
! | GGTGTTGAAGTTGTGGCCAT+AGG | - | chr6.1:76290565-76290584 | None:intergenic | 50.0% |
! | TCGCAATTTCCTGACGGACA+AGG | + | chr6.1:76289495-76289514 | MS.gene059637:CDS | 50.0% |
! | TGAGGGCTGCTCGCAATTTT+GGG | - | chr6.1:76287161-76287180 | None:intergenic | 50.0% |
!! | GACCACAGGTGTTGAAGTTG+CGG | - | chr6.1:76290638-76290657 | None:intergenic | 50.0% |
!! | GAGAGACAGGCTTTGTTTCG+TGG | + | chr6.1:76287933-76287952 | MS.gene059637:CDS | 50.0% |
!! | TGTCCCGGCTTGCTAATTGA+TGG | - | chr6.1:76288101-76288120 | None:intergenic | 50.0% |
ATGACAGCTGCCTCTCCCAT+CGG | + | chr6.1:76289444-76289463 | MS.gene059637:CDS | 55.0% | |
CAAAATTGCGAGCAGCCCTC+AGG | + | chr6.1:76287160-76287179 | MS.gene059637:CDS | 55.0% | |
CAAGCTGCAAAGACGCTTGC+AGG | + | chr6.1:76288798-76288817 | MS.gene059637:CDS | 55.0% | |
CACGCGATAGCAGGGTAAGT+AGG | + | chr6.1:76287186-76287205 | MS.gene059637:intron | 55.0% | |
CAGCAGGAAGCCACTAGCAA+TGG | + | chr6.1:76290484-76290503 | MS.gene059637:CDS | 55.0% | |
CAGGCAGCAAGGGAAATTGG+TGG | + | chr6.1:76290143-76290162 | MS.gene059637:intron | 55.0% | |
CCGAAAAGACCGATGTCTCC+TGG | + | chr6.1:76289381-76289400 | MS.gene059637:CDS | 55.0% | |
CTGCAAGCGTCTTTGCAGCT+TGG | - | chr6.1:76288800-76288819 | None:intergenic | 55.0% | |
GACAGGTGAAGCTGATGAGG+AGG | - | chr6.1:76288574-76288593 | None:intergenic | 55.0% | |
GAGTGTGACGGTGCAGAAAC+CGG | + | chr6.1:76285083-76285102 | MS.gene059637:CDS | 55.0% | |
GCAACAGCAGGTGGTTCAAC+AGG | + | chr6.1:76285059-76285078 | MS.gene059637:CDS | 55.0% | |
GCATCTAACTGGACCCACAG+TGG | + | chr6.1:76286644-76286663 | MS.gene059637:intron | 55.0% | |
GCGGCAAATGCTGCCATAAC+TGG | + | chr6.1:76287987-76288006 | MS.gene059637:CDS | 55.0% | |
GTACCACGAGCACTTGAGAC+AGG | - | chr6.1:76288591-76288610 | None:intergenic | 55.0% | |
GTGCAGAAACCGGTTGGAGT+GGG | + | chr6.1:76285093-76285112 | MS.gene059637:CDS | 55.0% | |
GTTGAAGTTGCGGCCATAGG+TGG | - | chr6.1:76290529-76290548 | None:intergenic | 55.0% | |
TACCGTCGAAGAAGCTAGCG+AGG | + | chr6.1:76284995-76285014 | MS.gene059637:CDS | 55.0% | |
TCACCTGTCTCAAGTGCTCG+TGG | + | chr6.1:76288585-76288604 | MS.gene059637:CDS | 55.0% | |
TCTGTCACTCCTTGTCCGTC+AGG | - | chr6.1:76289507-76289526 | None:intergenic | 55.0% | |
TTCCCTTGCTGCCTGAAAGC+AGG | - | chr6.1:76290138-76290157 | None:intergenic | 55.0% | |
! | AGTGGGTGGTTTGCCGATAC+CGG | + | chr6.1:76285110-76285129 | MS.gene059637:CDS | 55.0% |
! | CTGAGGGCTGCTCGCAATTT+TGG | - | chr6.1:76287162-76287181 | None:intergenic | 55.0% |
! | GGTGTTGAAGTTGCGGCCAT+AGG | - | chr6.1:76290532-76290551 | None:intergenic | 55.0% |
! | GGTTCAACAGGGGAGTGTGA+CGG | + | chr6.1:76285071-76285090 | MS.gene059637:CDS | 55.0% |
! | TGAATTGTCTGCACCGGCGT+TGG | - | chr6.1:76285144-76285163 | None:intergenic | 55.0% |
! | TGACGGACAAGGAGTGACAG+AGG | + | chr6.1:76289506-76289525 | MS.gene059637:CDS | 55.0% |
! | TGCCTCGCTAGCTTCTTCGA+CGG | - | chr6.1:76285000-76285019 | None:intergenic | 55.0% |
!! | AGGGTGCTGGACCTTTGACA+AGG | - | chr6.1:76288554-76288573 | None:intergenic | 55.0% |
!! | GTTGGCACTGGTACCGGTAT+CGG | - | chr6.1:76285126-76285145 | None:intergenic | 55.0% |
ATGTAGGAGGAGGCTGGGGA+AGG | + | chr6.1:76287768-76287787 | MS.gene059637:intron | 60.0% | |
CAGAAACCGGTTGGAGTGGG+TGG | + | chr6.1:76285096-76285115 | MS.gene059637:CDS | 60.0% | |
GCAGTCGAAACCGCAACAGC+AGG | + | chr6.1:76285047-76285066 | MS.gene059637:CDS | 60.0% | |
GCATGGGTCGTTTGCCCGAT+GGG | - | chr6.1:76289462-76289481 | None:intergenic | 60.0% | |
GGCAAACCACCCACTCCAAC+CGG | - | chr6.1:76285105-76285124 | None:intergenic | 60.0% | |
GGCCGCAACTTCAACACCTG+TGG | + | chr6.1:76290534-76290553 | MS.gene059637:CDS | 60.0% | |
GGCTGCAAATGCGACTGCGA+CGG | + | chr6.1:76284960-76284979 | MS.gene059637:CDS | 60.0% | |
GGTGCAGAAACCGGTTGGAG+TGG | + | chr6.1:76285092-76285111 | MS.gene059637:CDS | 60.0% | |
GGTTACGACTGCGGCTGCAA+CGG | + | chr6.1:76284930-76284949 | MS.gene059637:CDS | 60.0% | |
GTCGAAACCGCAACAGCAGG+TGG | + | chr6.1:76285050-76285069 | MS.gene059637:CDS | 60.0% | |
GTGACGGTGCAGAAACCGGT+TGG | + | chr6.1:76285087-76285106 | MS.gene059637:CDS | 60.0% | |
GTGGCCATAGGTGGAACTGC+AGG | - | chr6.1:76290553-76290572 | None:intergenic | 60.0% | |
TCCTGTCATGGCAAGGTCGG+CGG | - | chr6.1:76286688-76286707 | None:intergenic | 60.0% | |
TGACAGCTGCCTCTCCCATC+GGG | + | chr6.1:76289445-76289464 | MS.gene059637:CDS | 60.0% | |
TGCTATCGCGTGCTCCCTGA+GGG | - | chr6.1:76287178-76287197 | None:intergenic | 60.0% | |
! | GAAGCTGATGAGGAGGGTGC+TGG | - | chr6.1:76288567-76288586 | None:intergenic | 60.0% |
! | TCAGGGAGCACGCGATAGCA+GGG | + | chr6.1:76287178-76287197 | MS.gene059637:CDS | 60.0% |
ACCGGTACCAGTGCCAACGC+CGG | + | chr6.1:76285128-76285147 | MS.gene059637:CDS | 65.0% | |
CAAATGCGACTGCGACGGCG+TGG | + | chr6.1:76284965-76284984 | MS.gene059637:CDS | 65.0% | |
CTGCTATCGCGTGCTCCCTG+AGG | - | chr6.1:76287179-76287198 | None:intergenic | 65.0% | |
GCGGCCATAGGTGGAACTGC+AGG | - | chr6.1:76290619-76290638 | None:intergenic | 65.0% | |
GGCATGGGTCGTTTGCCCGA+TGG | - | chr6.1:76289463-76289482 | None:intergenic | 65.0% | |
GGTCGTTTGCCCGATGGGAG+AGG | - | chr6.1:76289457-76289476 | None:intergenic | 65.0% | |
GTCATGGCAAGGTCGGCGGA+CGG | - | chr6.1:76286684-76286703 | None:intergenic | 65.0% | |
TACGACTGCGGCTGCAACGG+CGG | + | chr6.1:76284933-76284952 | MS.gene059637:CDS | 65.0% | |
TCCGCCGACCTTGCCATGAC+AGG | + | chr6.1:76286684-76286703 | MS.gene059637:intron | 65.0% | |
! | CTCAGGGAGCACGCGATAGC+AGG | + | chr6.1:76287177-76287196 | MS.gene059637:CDS | 65.0% |
!! | ACCGGCGTTGGCACTGGTAC+CGG | - | chr6.1:76285132-76285151 | None:intergenic | 65.0% |
ATGGCAAGGTCGGCGGACGG+CGG | - | chr6.1:76286681-76286700 | None:intergenic | 70.0% | |
TGCGACTGCGACGGCGTGGT+TGG | + | chr6.1:76284969-76284988 | MS.gene059637:CDS | 70.0% | |
!! | GTCTGCACCGGCGTTGGCAC+TGG | - | chr6.1:76285138-76285157 | None:intergenic | 70.0% |
TGCGGCTGCAACGGCGGCTG+CGG | + | chr6.1:76284939-76284958 | MS.gene059637:CDS | 75.0% | |
TGGCAAGGTCGGCGGACGGC+GGG | - | chr6.1:76286680-76286699 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.1 | gene | 76284868 | 76290717 | 76284868 | ID=MS.gene059637 |
chr6.1 | mRNA | 76284868 | 76290717 | 76284868 | ID=MS.gene059637.t1;Parent=MS.gene059637 |
chr6.1 | exon | 76284868 | 76285184 | 76284868 | ID=MS.gene059637.t1.exon1;Parent=MS.gene059637.t1 |
chr6.1 | CDS | 76284868 | 76285184 | 76284868 | ID=cds.MS.gene059637.t1;Parent=MS.gene059637.t1 |
chr6.1 | exon | 76286277 | 76286384 | 76286277 | ID=MS.gene059637.t1.exon2;Parent=MS.gene059637.t1 |
chr6.1 | CDS | 76286277 | 76286384 | 76286277 | ID=cds.MS.gene059637.t1;Parent=MS.gene059637.t1 |
chr6.1 | exon | 76287022 | 76287199 | 76287022 | ID=MS.gene059637.t1.exon3;Parent=MS.gene059637.t1 |
chr6.1 | CDS | 76287022 | 76287199 | 76287022 | ID=cds.MS.gene059637.t1;Parent=MS.gene059637.t1 |
chr6.1 | exon | 76287774 | 76288124 | 76287774 | ID=MS.gene059637.t1.exon4;Parent=MS.gene059637.t1 |
chr6.1 | CDS | 76287774 | 76288124 | 76287774 | ID=cds.MS.gene059637.t1;Parent=MS.gene059637.t1 |
chr6.1 | exon | 76288546 | 76288652 | 76288546 | ID=MS.gene059637.t1.exon5;Parent=MS.gene059637.t1 |
chr6.1 | CDS | 76288546 | 76288652 | 76288546 | ID=cds.MS.gene059637.t1;Parent=MS.gene059637.t1 |
chr6.1 | exon | 76288725 | 76288819 | 76288725 | ID=MS.gene059637.t1.exon6;Parent=MS.gene059637.t1 |
chr6.1 | CDS | 76288725 | 76288819 | 76288725 | ID=cds.MS.gene059637.t1;Parent=MS.gene059637.t1 |
chr6.1 | exon | 76289193 | 76289609 | 76289193 | ID=MS.gene059637.t1.exon7;Parent=MS.gene059637.t1 |
chr6.1 | CDS | 76289193 | 76289609 | 76289193 | ID=cds.MS.gene059637.t1;Parent=MS.gene059637.t1 |
chr6.1 | exon | 76290389 | 76290717 | 76290389 | ID=MS.gene059637.t1.exon8;Parent=MS.gene059637.t1 |
chr6.1 | CDS | 76290389 | 76290717 | 76290389 | ID=cds.MS.gene059637.t1;Parent=MS.gene059637.t1 |
Gene Sequence |
Protein sequence |