AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene016115

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene016115.t1 MTR_1g014640 99.320 294 2 0 1 294 44 337 0.0 602
MS.gene016115.t1 MTR_1g013400 99.320 294 2 0 1 294 44 337 0.0 602
MS.gene016115.t1 MTR_3g105730 92.491 293 21 1 1 293 1 292 0.0 556
MS.gene016115.t1 MTR_3g105730 93.258 267 17 1 27 293 5 270 0.0 514
MS.gene016115.t1 MTR_1g115570 65.918 267 82 3 19 280 75 337 2.88e-128 369
MS.gene016115.t1 MTR_3g105730 91.935 186 15 0 1 186 1 186 1.00e-124 355
MS.gene016115.t1 MTR_3g091060 60.741 270 102 1 15 280 71 340 2.61e-116 339
MS.gene016115.t1 MTR_4g094208 47.328 262 131 5 23 280 18 276 3.47e-70 219
MS.gene016115.t1 MTR_2g008850 45.802 262 135 5 23 280 22 280 1.59e-69 217
MS.gene016115.t1 MTR_2g008850 47.679 237 118 4 47 280 1 234 2.82e-67 209
MS.gene016115.t1 MTR_5g063940 43.893 262 140 5 23 280 23 281 4.06e-67 211
MS.gene016115.t1 MTR_3g074610 42.254 284 157 5 1 280 1 281 4.52e-67 211
MS.gene016115.t1 MTR_8g463130 44.803 279 138 7 7 280 14 281 7.45e-67 210
MS.gene016115.t1 MTR_2g078760 42.000 300 149 8 3 280 36 332 1.23e-66 211
MS.gene016115.t1 MTR_8g463130 45.817 251 129 5 34 280 6 253 1.75e-65 206
MS.gene016115.t1 MTR_2g078760 44.444 252 133 5 33 280 5 253 7.87e-65 204
MS.gene016115.t1 MTR_5g063940 45.992 237 122 4 47 280 1 234 7.93e-65 203
MS.gene016115.t1 MTR_4g094542 42.857 252 136 5 33 280 117 364 2.74e-60 196
MS.gene016115.t1 MTR_3g464650 40.141 284 147 6 8 280 43 314 6.83e-60 193
MS.gene016115.t1 MTR_3g464700 46.698 212 106 3 42 250 95 302 1.00e-57 188
MS.gene016115.t1 MTR_5g071550 40.784 255 138 4 35 280 124 374 1.72e-56 186
MS.gene016115.t1 MTR_5g071550 43.056 216 116 3 35 247 124 335 1.20e-50 171
MS.gene016115.t1 MTR_2g078760 40.078 257 129 8 3 237 36 289 4.12e-50 167
MS.gene016115.t1 MTR_1g050520 40.698 258 140 6 33 278 386 642 4.57e-49 172
MS.gene016115.t1 MTR_1g015110 35.762 302 136 7 35 278 240 541 2.99e-47 166
MS.gene016115.t1 MTR_2g040500 33.524 349 156 9 10 285 195 540 5.29e-46 162
MS.gene016115.t1 MTR_5g024340 38.023 263 141 7 36 280 87 345 6.26e-46 159
MS.gene016115.t1 MTR_5g080680 39.912 228 123 3 35 248 102 329 1.84e-44 155
MS.gene016115.t1 MTR_4g125810 39.526 253 110 6 65 278 253 501 2.52e-44 157
MS.gene016115.t1 MTR_3g068200 33.974 312 169 5 19 293 77 388 2.92e-44 155
MS.gene016115.t1 MTR_1g086350 34.420 276 147 8 42 288 71 341 1.21e-43 153
MS.gene016115.t1 MTR_1g086350 34.420 276 147 8 42 288 87 357 1.34e-43 153
MS.gene016115.t1 MTR_4g116420 35.581 267 147 5 36 280 87 350 5.02e-43 151
MS.gene016115.t1 MTR_1g086350 34.677 248 138 6 61 288 12 255 5.39e-43 149
MS.gene016115.t1 MTR_3g104710 34.528 307 138 7 35 278 231 537 2.46e-42 153
MS.gene016115.t1 MTR_5g009370 36.140 285 144 9 34 283 52 333 4.85e-42 147
MS.gene016115.t1 MTR_1g028300 38.686 274 141 6 29 278 107 377 3.49e-41 147
MS.gene016115.t1 MTR_4g123080 35.745 235 127 5 64 278 94 324 5.91e-41 145
MS.gene016115.t1 MTR_4g123080 35.745 235 127 5 64 278 112 342 6.71e-41 146
MS.gene016115.t1 MTR_3g107880 36.296 270 147 8 32 280 22 287 6.77e-41 144
MS.gene016115.t1 MTR_8g102550 34.589 292 145 9 30 278 98 386 7.69e-41 146
MS.gene016115.t1 MTR_3g107880 36.296 270 147 8 32 280 79 344 2.06e-40 144
MS.gene016115.t1 MTR_3g107880 36.296 270 147 8 32 280 80 345 2.29e-40 144
MS.gene016115.t1 MTR_6g081850 34.783 276 148 8 38 283 48 321 7.73e-39 139
MS.gene016115.t1 MTR_2g033000 32.746 284 141 9 32 278 59 329 7.92e-39 140
MS.gene016115.t1 MTR_1g014190 30.818 318 148 12 29 280 18 329 1.02e-35 132
MS.gene016115.t1 MTR_1g014190 30.818 318 148 12 29 280 56 367 1.24e-35 132
MS.gene016115.t1 MTR_4g007440 28.527 319 153 9 29 280 18 328 4.61e-34 127
MS.gene016115.t1 MTR_3g105880 29.538 325 159 10 29 288 18 337 9.88e-34 126
MS.gene016115.t1 MTR_3g105880 31.636 275 127 9 29 247 18 287 8.93e-33 123
MS.gene016115.t1 MTR_2g078760 37.500 200 102 7 3 182 36 232 7.19e-32 119
MS.gene016115.t1 MTR_4g094208 42.593 162 88 4 23 182 18 176 8.93e-32 117
MS.gene016115.t1 MTR_5g080680 37.912 182 99 3 35 202 102 283 1.09e-28 111
MS.gene016115.t1 MTR_3g491830 27.508 309 168 8 17 277 46 346 1.88e-28 112
MS.gene016115.t1 MTR_4g118340 30.970 268 142 9 63 288 84 350 2.05e-28 112
MS.gene016115.t1 MTR_1g110210 32.157 255 144 10 48 278 46 295 3.84e-28 110
MS.gene016115.t1 MTR_1g075730 29.333 225 142 4 56 280 70 277 5.10e-28 109
MS.gene016115.t1 MTR_1g075730 28.889 225 139 3 56 280 70 273 5.49e-28 109
MS.gene016115.t1 MTR_7g112430 32.016 253 144 8 54 285 57 302 3.27e-27 110
MS.gene016115.t1 MTR_2g020970 29.545 308 170 11 27 294 55 355 1.18e-26 108
MS.gene016115.t1 MTR_2g020970 29.932 294 159 11 27 280 55 341 1.85e-26 107
MS.gene016115.t1 MTR_1g019760 33.475 236 133 9 65 281 65 295 1.88e-26 107
MS.gene016115.t1 MTR_1g019760 32.917 240 137 9 65 285 65 299 2.85e-26 107
MS.gene016115.t1 MTR_4g013295 31.071 280 144 10 60 290 72 351 3.53e-26 106
MS.gene016115.t1 MTR_5g071550 39.333 150 85 2 35 182 124 269 7.06e-26 103
MS.gene016115.t1 MTR_7g090530 31.873 251 130 8 65 275 69 318 1.10e-25 105
MS.gene016115.t1 MTR_7g070510 29.123 285 145 7 65 293 92 375 1.54e-25 105
MS.gene016115.t1 MTR_3g101540 30.738 244 145 8 65 289 66 304 1.94e-25 105
MS.gene016115.t1 MTR_3g101540 30.738 244 145 8 65 289 66 304 2.24e-25 105
MS.gene016115.t1 MTR_7g112490 30.488 246 123 7 67 264 93 338 3.81e-25 103
MS.gene016115.t1 MTR_7g112490 30.488 246 123 7 67 264 111 356 4.37e-25 103
MS.gene016115.t1 MTR_7g029240 33.206 262 149 12 54 293 57 314 5.33e-25 103
MS.gene016115.t1 MTR_1g083750 29.930 284 158 11 29 281 25 298 1.20e-24 102
MS.gene016115.t1 MTR_2g435550 30.075 266 140 8 61 280 88 353 1.55e-24 101
MS.gene016115.t1 MTR_1g083690 32.510 243 117 11 67 266 91 329 1.63e-24 101
MS.gene016115.t1 MTR_2g435550 30.075 266 140 8 61 280 74 339 1.64e-24 101
MS.gene016115.t1 MTR_2g435550 31.276 243 128 7 61 264 88 330 2.46e-24 101
MS.gene016115.t1 MTR_1g116260 30.034 293 139 10 55 284 69 358 3.01e-24 101
MS.gene016115.t1 MTR_7g100240 30.522 249 124 7 45 247 47 292 3.81e-24 100
MS.gene016115.t1 MTR_4g120410 35.556 180 91 7 125 280 174 352 5.70e-24 100
MS.gene016115.t1 MTR_6g087000 29.730 259 138 9 65 280 124 381 6.23e-24 102
MS.gene016115.t1 MTR_1g016620 33.036 224 110 6 67 251 70 292 7.33e-24 99.8
MS.gene016115.t1 MTR_1g041475 28.972 214 131 3 67 280 81 273 8.41e-24 98.2
MS.gene016115.t1 MTR_6g087000 29.730 259 138 9 65 280 124 381 1.02e-23 101
MS.gene016115.t1 MTR_1g067210 29.520 271 141 8 45 269 52 318 2.77e-23 98.6
MS.gene016115.t1 MTR_8g074930 30.000 290 137 10 67 294 81 366 5.25e-23 97.8
MS.gene016115.t1 MTR_7g090550 31.154 260 128 10 31 248 42 292 6.50e-23 98.2
MS.gene016115.t1 MTR_5g005810 30.877 285 149 12 33 280 298 571 8.70e-23 98.6
MS.gene016115.t1 MTR_3g032660 29.771 262 135 10 45 264 51 305 3.54e-22 95.9
MS.gene016115.t1 MTR_3g032700 29.389 262 136 10 45 264 51 305 6.47e-22 95.1
MS.gene016115.t1 MTR_1g106855 29.617 287 133 9 67 289 63 344 1.72e-21 93.6
MS.gene016115.t1 MTR_2g033910 30.800 250 132 7 60 269 70 318 4.71e-21 92.0
MS.gene016115.t1 MTR_1g071370 28.692 237 111 6 100 278 200 436 1.01e-20 92.8
MS.gene016115.t1 MTR_1g106855 31.111 225 108 7 67 247 63 284 8.49e-20 87.8
MS.gene016115.t1 MTR_1g112840 29.018 224 114 7 67 248 83 303 8.95e-20 89.0
MS.gene016115.t1 MTR_4g037470 30.677 251 120 7 67 264 107 356 1.66e-19 88.6
MS.gene016115.t1 MTR_4g037470 30.677 251 120 7 67 264 98 347 2.06e-19 88.2
MS.gene016115.t1 MTR_2g090190 30.249 281 134 10 67 288 92 369 2.69e-19 87.8
MS.gene016115.t1 MTR_7g081020 27.530 247 133 7 65 269 76 318 5.01e-19 86.7
MS.gene016115.t1 MTR_7g060770 30.088 226 114 5 67 248 265 490 1.63e-18 85.9
MS.gene016115.t1 MTR_0015s0140 28.309 272 137 9 65 278 79 350 4.75e-18 84.0
MS.gene016115.t1 MTR_4g113480 27.481 262 151 9 47 274 60 316 5.20e-18 84.3
MS.gene016115.t1 MTR_1g083750 30.476 210 117 7 90 281 8 206 5.78e-18 83.2
MS.gene016115.t1 MTR_7g081020 27.679 224 117 6 67 248 78 298 6.17e-18 82.8
MS.gene016115.t1 MTR_8g017240 31.250 240 129 10 61 266 82 319 1.56e-17 82.0
MS.gene016115.t1 MTR_7g021530 29.435 248 140 9 39 264 59 293 1.87e-17 82.0
MS.gene016115.t1 MTR_7g021530 29.435 248 140 9 39 264 109 343 3.15e-17 81.6
MS.gene016115.t1 MTR_7g021530 29.435 248 140 9 39 264 150 384 3.75e-17 81.6
MS.gene016115.t1 MTR_7g080170 29.577 213 127 6 93 283 174 385 5.38e-17 81.3
MS.gene016115.t1 MTR_7g080170 29.577 213 127 6 93 283 66 277 9.01e-17 80.1
MS.gene016115.t1 MTR_4g123080 35.659 129 70 3 160 278 104 229 1.57e-16 78.2
MS.gene016115.t1 MTR_4g076560 28.685 251 127 9 67 269 204 450 3.06e-16 79.0
MS.gene016115.t1 MTR_8g074930 29.482 251 118 8 102 294 5 254 4.27e-16 77.0
MS.gene016115.t1 MTR_3g032590 30.994 171 86 4 125 264 142 311 2.67e-13 70.1
MS.gene016115.t1 MTR_5g005810 30.808 198 103 9 33 207 298 484 1.95e-12 67.8
MS.gene016115.t1 MTR_4g119830 32.484 157 70 5 126 248 277 431 1.61e-11 64.7
MS.gene016115.t1 MTR_7g021530 27.803 223 128 8 39 239 109 320 4.52e-11 62.8
MS.gene016115.t1 MTR_7g021530 27.803 223 128 8 39 239 150 361 6.77e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene016115.t1 AT4G31750 90.476 294 24 2 1 291 1 293 0.0 535
MS.gene016115.t1 AT4G31750 90.476 294 24 2 1 291 1 293 0.0 535
MS.gene016115.t1 AT4G31750 90.476 294 24 2 1 291 1 293 0.0 535
MS.gene016115.t1 AT5G24940 83.630 281 45 1 1 281 1 280 7.35e-177 496
MS.gene016115.t1 AT5G10740 82.562 281 48 1 1 281 1 280 5.58e-173 483
MS.gene016115.t1 AT5G10740 82.562 281 48 1 1 281 1 280 5.58e-173 483
MS.gene016115.t1 AT1G43900 63.878 263 89 2 23 280 107 368 5.41e-125 362
MS.gene016115.t1 AT5G53140 58.687 259 107 0 22 280 89 347 1.43e-114 337
MS.gene016115.t1 AT5G53140 58.687 259 107 0 22 280 89 347 1.43e-114 337
MS.gene016115.t1 AT1G78200 45.420 262 139 3 23 280 21 282 1.95e-71 222
MS.gene016115.t1 AT1G78200 45.420 262 139 3 23 280 21 282 1.95e-71 222
MS.gene016115.t1 AT1G78200 45.420 262 139 3 23 280 21 282 1.95e-71 222
MS.gene016115.t1 AT1G34750 44.656 262 138 5 23 280 23 281 9.10e-69 215
MS.gene016115.t1 AT1G34750 44.656 262 138 5 23 280 23 281 9.10e-69 215
MS.gene016115.t1 AT1G34750 44.656 262 138 5 23 280 23 281 9.10e-69 215
MS.gene016115.t1 AT1G78200 46.414 237 124 2 47 280 1 237 4.75e-68 212
MS.gene016115.t1 AT1G78200 46.414 237 124 2 47 280 1 237 4.75e-68 212
MS.gene016115.t1 AT2G20630 45.635 252 130 5 33 280 30 278 2.28e-67 211
MS.gene016115.t1 AT4G28400 43.774 265 141 6 21 280 21 282 7.63e-66 207
MS.gene016115.t1 AT4G28400 44.048 252 134 5 33 280 12 260 1.14e-65 206
MS.gene016115.t1 AT2G20630 45.059 253 132 5 33 281 30 279 1.60e-65 207
MS.gene016115.t1 AT1G22280 44.488 254 134 5 31 280 30 280 1.36e-64 204
MS.gene016115.t1 AT3G15260 45.627 263 135 6 23 280 29 288 1.17e-63 202
MS.gene016115.t1 AT3G15260 45.627 263 135 6 23 280 29 288 1.17e-63 202
MS.gene016115.t1 AT1G22280 43.846 260 133 6 31 280 30 286 7.90e-63 200
MS.gene016115.t1 AT2G34740 43.922 255 134 6 32 281 85 335 5.94e-60 194
MS.gene016115.t1 AT2G40180 40.996 261 135 7 35 280 129 385 8.04e-57 187
MS.gene016115.t1 AT1G07160 41.473 258 135 6 35 280 123 376 1.61e-56 187
MS.gene016115.t1 AT2G30020 40.945 254 137 4 35 278 140 390 1.24e-55 185
MS.gene016115.t1 AT1G34750 44.749 219 114 5 23 237 23 238 2.55e-53 174
MS.gene016115.t1 AT1G67820 42.982 228 117 4 29 247 74 297 7.32e-53 178
MS.gene016115.t1 AT1G67820 42.982 228 117 4 29 247 110 333 2.17e-52 177
MS.gene016115.t1 AT3G51470 40.230 261 139 7 33 280 27 283 1.38e-49 167
MS.gene016115.t1 AT3G51470 40.230 261 139 7 33 280 71 327 3.05e-49 167
MS.gene016115.t1 AT2G40860 40.230 261 136 7 33 278 293 548 1.98e-48 169
MS.gene016115.t1 AT2G40860 40.230 261 136 7 33 278 391 646 3.34e-48 170
MS.gene016115.t1 AT4G28400 41.892 222 121 6 21 237 21 239 8.80e-48 160
MS.gene016115.t1 AT5G57050 38.796 299 126 11 35 278 73 369 3.86e-47 162
MS.gene016115.t1 AT5G57050 38.796 299 126 11 35 278 113 409 3.88e-47 163
MS.gene016115.t1 AT4G26080 38.176 296 127 10 35 278 129 420 1.57e-46 162
MS.gene016115.t1 AT3G62260 35.766 274 143 7 42 286 85 354 5.21e-46 159
MS.gene016115.t1 AT3G62260 35.766 274 143 7 42 286 86 355 5.21e-46 159
MS.gene016115.t1 AT3G62260 36.059 269 139 7 47 286 1 265 1.56e-45 155
MS.gene016115.t1 AT2G33700 39.648 227 123 5 64 280 122 344 1.91e-45 158
MS.gene016115.t1 AT5G59220 40.086 232 121 3 35 248 112 343 1.34e-44 156
MS.gene016115.t1 AT2G34740 41.395 215 117 6 32 241 81 291 1.56e-44 153
MS.gene016115.t1 AT2G34740 41.395 215 117 6 32 241 99 309 1.59e-44 154
MS.gene016115.t1 AT1G07430 40.084 237 117 6 35 248 121 355 2.90e-44 156
MS.gene016115.t1 AT2G25620 36.782 261 138 5 42 278 97 354 4.15e-43 152
MS.gene016115.t1 AT2G25620 36.782 261 138 5 42 278 97 354 4.15e-43 152
MS.gene016115.t1 AT2G40860 38.800 250 133 7 33 267 391 635 9.46e-43 155
MS.gene016115.t1 AT2G29380 37.324 284 135 8 35 278 78 358 1.04e-42 150
MS.gene016115.t1 AT5G51760 32.132 333 168 5 10 285 55 386 2.53e-41 147
MS.gene016115.t1 AT5G51760 32.132 333 168 5 10 285 85 416 4.35e-41 147
MS.gene016115.t1 AT3G17250 35.950 242 127 6 63 280 156 393 6.84e-41 147
MS.gene016115.t1 AT1G17550 34.295 312 136 8 35 278 189 499 9.16e-41 148
MS.gene016115.t1 AT1G17550 34.295 312 136 8 35 278 189 499 9.16e-41 148
MS.gene016115.t1 AT3G11410 36.975 238 125 3 36 248 106 343 5.72e-40 144
MS.gene016115.t1 AT1G48040 38.618 246 111 6 64 280 115 349 6.96e-40 143
MS.gene016115.t1 AT1G72770 33.762 311 138 8 35 278 190 499 4.70e-39 143
MS.gene016115.t1 AT1G72770 33.762 311 138 8 35 278 190 499 4.70e-39 143
MS.gene016115.t1 AT1G72770 33.762 311 138 8 35 278 190 499 4.70e-39 143
MS.gene016115.t1 AT1G18030 32.967 273 151 9 38 280 78 348 1.93e-34 128
MS.gene016115.t1 AT2G25070 29.394 330 163 10 29 293 18 342 6.78e-32 121
MS.gene016115.t1 AT2G25070 29.394 330 163 10 29 293 18 342 6.78e-32 121
MS.gene016115.t1 AT4G31860 29.338 317 154 9 29 280 18 329 1.48e-31 120
MS.gene016115.t1 AT2G40860 38.095 210 111 6 33 228 391 595 3.75e-31 122
MS.gene016115.t1 AT3G16800 34.599 237 122 6 61 264 89 325 5.20e-31 119
MS.gene016115.t1 AT3G16800 34.599 237 122 6 61 264 89 325 5.20e-31 119
MS.gene016115.t1 AT3G16800 34.599 237 122 6 61 264 89 325 5.20e-31 119
MS.gene016115.t1 AT3G16800 34.783 230 117 6 68 264 1 230 1.72e-30 115
MS.gene016115.t1 AT3G16800 34.783 230 117 6 68 264 1 230 1.72e-30 115
MS.gene016115.t1 AT4G08260 33.937 221 108 5 64 278 18 206 5.93e-30 113
MS.gene016115.t1 AT4G31860 30.909 275 129 8 29 247 18 287 1.14e-29 114
MS.gene016115.t1 AT1G22280 41.558 154 85 4 31 182 30 180 1.22e-29 111
MS.gene016115.t1 AT1G68410 34.043 235 127 8 65 278 73 300 1.69e-29 116
MS.gene016115.t1 AT1G68410 34.043 235 127 8 65 278 73 300 1.69e-29 116
MS.gene016115.t1 AT1G68410 34.043 235 127 8 65 278 73 300 1.69e-29 116
MS.gene016115.t1 AT1G68410 34.043 235 127 8 65 278 73 300 1.69e-29 116
MS.gene016115.t1 AT1G18030 34.222 225 121 7 38 237 78 300 2.82e-29 113
MS.gene016115.t1 AT4G27800 29.126 309 163 9 17 277 45 345 1.17e-28 113
MS.gene016115.t1 AT5G57050 39.196 199 90 9 35 204 113 309 2.20e-28 111
MS.gene016115.t1 AT1G09160 32.245 245 140 9 54 278 57 295 4.86e-28 112
MS.gene016115.t1 AT1G09160 32.245 245 140 9 54 278 57 295 4.86e-28 112
MS.gene016115.t1 AT4G32950 38.140 215 107 9 65 256 72 283 1.09e-27 109
MS.gene016115.t1 AT5G59220 37.297 185 98 3 35 201 112 296 1.30e-27 108
MS.gene016115.t1 AT1G47380 31.557 244 143 8 65 289 64 302 3.19e-27 110
MS.gene016115.t1 AT5G02760 31.579 266 132 9 26 247 32 291 3.41e-27 109
MS.gene016115.t1 AT4G31860 31.179 263 120 8 29 235 18 275 5.51e-27 106
MS.gene016115.t1 AT4G27800 29.710 276 142 8 17 248 45 312 1.70e-26 106
MS.gene016115.t1 AT4G27800 29.710 276 142 8 17 248 45 312 1.79e-26 106
MS.gene016115.t1 AT5G27930 31.034 261 132 8 67 280 94 353 1.79e-25 104
MS.gene016115.t1 AT5G27930 31.034 261 132 8 67 280 94 353 1.79e-25 104
MS.gene016115.t1 AT3G05640 32.941 255 130 11 67 280 95 349 5.13e-25 103
MS.gene016115.t1 AT3G05640 32.941 255 130 11 67 280 95 349 5.13e-25 103
MS.gene016115.t1 AT3G05640 32.941 255 130 11 67 280 95 349 5.13e-25 103
MS.gene016115.t1 AT2G20050 31.518 257 133 10 65 280 143 397 5.82e-25 105
MS.gene016115.t1 AT2G20050 31.518 257 133 10 65 280 143 397 6.40e-25 105
MS.gene016115.t1 AT3G63320 27.273 319 134 8 62 283 66 383 1.27e-24 102
MS.gene016115.t1 AT3G23360 29.699 266 141 7 20 280 35 259 1.80e-24 99.8
MS.gene016115.t1 AT3G06270 28.231 294 164 11 27 280 56 342 1.82e-24 101
MS.gene016115.t1 AT5G19280 30.851 282 154 11 33 280 303 577 2.64e-24 102
MS.gene016115.t1 AT3G17090 33.058 242 122 7 67 269 86 326 6.89e-24 100
MS.gene016115.t1 AT3G51370 28.720 289 138 9 65 290 79 362 8.29e-24 100
MS.gene016115.t1 AT3G51370 28.720 289 138 9 65 290 79 362 8.29e-24 100
MS.gene016115.t1 AT5G26010 35.681 213 105 8 65 247 73 283 1.40e-23 98.6
MS.gene016115.t1 AT3G17090 33.182 220 108 6 67 247 86 305 7.36e-23 96.3
MS.gene016115.t1 AT3G12620 29.537 281 133 9 60 278 78 355 8.34e-23 97.4
MS.gene016115.t1 AT3G12620 29.537 281 133 9 60 278 78 355 8.34e-23 97.4
MS.gene016115.t1 AT3G27140 30.268 261 115 5 47 292 1 209 2.53e-22 93.6
MS.gene016115.t1 AT3G63340 28.692 237 111 7 100 278 207 443 2.97e-22 96.7
MS.gene016115.t1 AT5G01700 32.210 267 127 11 67 285 31 291 3.34e-22 95.1
MS.gene016115.t1 AT3G55050 29.787 282 133 10 65 284 84 362 3.43e-22 95.5
MS.gene016115.t1 AT3G55050 29.787 282 133 10 65 284 84 362 3.43e-22 95.5
MS.gene016115.t1 AT3G63340 28.692 237 111 7 100 278 207 443 4.24e-22 96.7
MS.gene016115.t1 AT3G63340 28.512 242 115 7 100 283 207 448 4.36e-22 96.7
MS.gene016115.t1 AT3G63340 28.512 242 115 7 100 283 207 448 4.36e-22 96.7
MS.gene016115.t1 AT3G63340 28.512 242 115 7 100 283 207 448 4.75e-22 96.7
MS.gene016115.t1 AT3G63340 28.512 242 115 7 100 283 207 448 4.93e-22 96.7
MS.gene016115.t1 AT3G63340 28.512 242 115 7 100 283 207 448 4.93e-22 96.7
MS.gene016115.t1 AT3G63340 28.512 242 115 7 100 283 207 448 4.93e-22 96.7
MS.gene016115.t1 AT3G63340 28.512 242 115 7 100 283 207 448 4.93e-22 96.7
MS.gene016115.t1 AT3G63340 28.512 242 115 7 100 283 207 448 5.18e-22 96.7
MS.gene016115.t1 AT5G19280 30.137 292 153 13 33 280 303 587 5.84e-22 96.3
MS.gene016115.t1 AT5G01700 32.210 267 131 10 65 285 78 340 7.13e-22 94.7
MS.gene016115.t1 AT3G63320 29.832 238 107 7 100 278 59 295 1.67e-21 93.6
MS.gene016115.t1 AT4G32950 37.306 193 97 8 65 234 72 263 2.59e-21 91.7
MS.gene016115.t1 AT1G72770 33.333 213 95 6 35 201 190 401 3.26e-21 93.2
MS.gene016115.t1 AT1G72770 33.333 213 95 6 35 201 190 401 3.26e-21 93.2
MS.gene016115.t1 AT4G38520 26.389 360 181 12 1 283 6 358 6.28e-21 92.0
MS.gene016115.t1 AT4G38520 26.389 360 181 12 1 283 6 358 6.28e-21 92.0
MS.gene016115.t1 AT5G06750 28.689 244 123 7 67 264 84 322 1.02e-20 91.7
MS.gene016115.t1 AT5G06750 28.689 244 123 7 67 264 84 322 1.02e-20 91.7
MS.gene016115.t1 AT4G33920 29.514 288 134 12 67 289 63 346 1.38e-20 90.9
MS.gene016115.t1 AT5G66080 30.204 245 125 7 67 269 84 324 1.45e-20 90.9
MS.gene016115.t1 AT1G79630 31.308 214 124 5 93 284 189 401 2.25e-19 88.2
MS.gene016115.t1 AT1G79630 31.308 214 124 5 93 284 119 331 2.25e-19 88.2
MS.gene016115.t1 AT1G79630 31.308 214 124 5 93 284 119 331 2.25e-19 88.2
MS.gene016115.t1 AT1G79630 31.308 214 124 5 93 284 185 397 2.45e-19 88.2
MS.gene016115.t1 AT1G79630 31.308 214 124 5 93 284 79 291 4.58e-19 86.7
MS.gene016115.t1 AT1G79630 31.308 214 124 5 93 284 79 291 4.58e-19 86.7
MS.gene016115.t1 AT1G79630 31.308 214 124 5 93 284 79 291 4.58e-19 86.7
MS.gene016115.t1 AT1G79630 31.308 214 124 5 93 284 79 291 4.58e-19 86.7
MS.gene016115.t1 AT1G03590 32.627 236 107 9 63 247 88 322 4.93e-19 87.0
MS.gene016115.t1 AT1G16220 28.421 285 138 9 65 284 95 378 2.10e-18 85.5
MS.gene016115.t1 AT4G03415 32.365 241 108 10 61 247 93 332 7.76e-18 83.6
MS.gene016115.t1 AT4G03415 32.365 241 108 10 61 247 93 332 7.76e-18 83.6
MS.gene016115.t1 AT4G03415 32.365 241 108 10 61 247 93 332 7.76e-18 83.6
MS.gene016115.t1 AT5G36250 27.826 230 132 8 79 285 169 387 9.68e-18 83.2
MS.gene016115.t1 AT3G02750 32.203 177 102 4 88 247 178 353 1.81e-17 82.8
MS.gene016115.t1 AT3G02750 32.203 177 102 4 88 247 178 353 1.81e-17 82.8
MS.gene016115.t1 AT2G05050 43.299 97 49 1 188 278 91 187 2.49e-17 79.0
MS.gene016115.t1 AT3G51370 28.629 248 116 7 102 290 32 277 4.10e-17 80.1
MS.gene016115.t1 AT3G63340 32.394 142 81 4 157 283 340 481 2.89e-15 76.6
MS.gene016115.t1 AT3G16560 26.966 267 121 11 52 247 160 423 5.71e-13 69.3
MS.gene016115.t1 AT3G16560 26.966 267 121 11 52 247 160 423 6.14e-13 69.3
MS.gene016115.t1 AT3G16560 26.966 267 121 11 52 247 160 423 6.14e-13 69.3
MS.gene016115.t1 AT3G16560 26.966 267 121 11 52 247 160 423 6.14e-13 69.3
MS.gene016115.t1 AT3G02750 25.283 265 138 6 88 293 178 441 8.80e-12 65.9
MS.gene016115.t1 AT5G36250 28.814 177 97 7 79 237 169 334 1.28e-11 64.7

Find 74 sgRNAs with CRISPR-Local

Find 323 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGAAACACACCTGAATTTC+CGG 0.245664 1.2:+7537989 None:intergenic
GGCTGATCAAATTACTAAAT+AGG 0.269326 1.2:+7538928 None:intergenic
TTCTCTTGAGTTTCTTATAC+TGG 0.273284 1.2:-7537830 MS.gene016115:CDS
TGGTGTCAGAAATGAATTTC+GGG 0.277480 1.2:+7538904 None:intergenic
CTACAGACCTATTGCAGATT+TGG 0.286258 1.2:+7538884 None:intergenic
TGTTGCTGATCCGGAAATTC+AGG 0.290323 1.2:-7537999 MS.gene016115:intron
GCTTCTTCTGCATCCTCAAT+TGG 0.302601 1.2:+7537060 None:intergenic
TTTGGTCTGGTTTGTGATCT+CGG 0.324635 1.2:+7538228 None:intergenic
TCCTTTGCCTCTCATCGGTT+TGG 0.352602 1.2:+7538210 None:intergenic
GCTTCCACTGCCATTCTTGT+TGG 0.352895 1.2:-7538687 MS.gene016115:CDS
CTTGCTGTTTCTCGCGCATT+TGG 0.353518 1.2:-7538046 MS.gene016115:CDS
TTGGTGTCAGAAATGAATTT+CGG 0.353974 1.2:+7538903 None:intergenic
ACAAGAATTGACGGCGTTGA+TGG 0.370122 1.2:-7539918 MS.gene016115:CDS
TCCATTGAAGATCTCTTGCC+AGG 0.370550 1.2:+7539954 None:intergenic
GTTTGCTTGTTGCAAATGTT+GGG 0.374361 1.2:-7538659 MS.gene016115:CDS
GCAATACGTTGTTGCTGATC+CGG 0.380454 1.2:-7538008 MS.gene016115:CDS
CTGTTAGTGGTGGAGGGCTC+AGG 0.380832 1.2:-7541576 MS.gene016115:intron
CGTTTGCTTGTTGCAAATGT+TGG 0.389439 1.2:-7538660 MS.gene016115:CDS
TGCCTCTCATCGGTTTGGTC+TGG 0.391323 1.2:+7538215 None:intergenic
AAGAACCTTGATTGTTCATC+AGG 0.396468 1.2:+7536965 None:intergenic
CTGAGCCCTCCACCACTAAC+AGG 0.401508 1.2:+7541577 None:intergenic
GCAGCATGAACCTGACTTGA+AGG 0.411927 1.2:+7541610 None:intergenic
AACCATACTTTACAGGAACT+TGG 0.415452 1.2:-7538084 MS.gene016115:intron
GTTATATGCAGGGGTGGAAA+TGG 0.436154 1.2:-7538624 MS.gene016115:intron
TCTGACACCAAATCTGCAAT+AGG 0.436455 1.2:-7538891 MS.gene016115:intron
ATGCGGGAGGCTTTGTTATG+TGG 0.437386 1.2:-7538181 MS.gene016115:CDS
TTGGTCTGGTTTGTGATCTC+GGG 0.438844 1.2:+7538229 None:intergenic
CAGCAACAACGTATTGCTTA+AGG 0.446853 1.2:+7538014 None:intergenic
CGTTTCCTGATGAACAATCA+AGG 0.448939 1.2:-7536970 MS.gene016115:CDS
TTCTATCCTTTGCCTCTCAT+CGG 0.449419 1.2:+7538205 None:intergenic
AATAATCAAAACAGAGATGC+TGG 0.452585 1.2:-7538717 MS.gene016115:CDS
GGAGGCTTTGTTATGTGGGC+TGG 0.461457 1.2:-7538176 MS.gene016115:intron
TATGGTCTTGCAGGAAGAAA+AGG 0.465734 1.2:-7537860 MS.gene016115:intron
ACCCCTGCATATAACAGCTC+TGG 0.472724 1.2:+7538632 None:intergenic
TATGGATATGCTAGCTCCCC+TGG 0.473211 1.2:-7539972 MS.gene016115:CDS
TGCTATGATTAAACCAATTG+AGG 0.496383 1.2:-7537073 MS.gene016115:CDS
ACTCCAGAGCTGTTATATGC+AGG 0.496874 1.2:-7538635 MS.gene016115:CDS
CCCTGGCAAGAGATCTTCAA+TGG 0.496968 1.2:-7539955 MS.gene016115:CDS
GGCGTTGATGGCGAAGTTGT+TGG 0.502083 1.2:-7539906 MS.gene016115:CDS
CTCCAGAGCTGTTATATGCA+GGG 0.504830 1.2:-7538634 MS.gene016115:CDS
TGGTTTGTGATCTCGGGAAA+CGG 0.510321 1.2:+7538235 None:intergenic
CAAACGGTCACCAACAAGAA+TGG 0.514978 1.2:+7538677 None:intergenic
GCTGATGATACACCTGTTAG+TGG 0.523474 1.2:-7541589 MS.gene016115:CDS
TCTTCGTCTCGTAATAGCTC+TGG 0.524836 1.2:-7536946 MS.gene016115:CDS
ATATGTATCTACAGCCAGAA+TGG 0.533971 1.2:-7540005 MS.gene016115:intron
TGCGGGAGGCTTTGTTATGT+GGG 0.548770 1.2:-7538180 MS.gene016115:CDS
CAACATTTGCAACAAGCAAA+CGG 0.552780 1.2:+7538661 None:intergenic
CCATTGAAGATCTCTTGCCA+GGG 0.555774 1.2:+7539955 None:intergenic
GATACACCTGTTAGTGGTGG+AGG 0.559527 1.2:-7541583 MS.gene016115:CDS
GTCACCAACAAGAATGGCAG+TGG 0.571832 1.2:+7538683 None:intergenic
TACTGGCTAGTGACGGACTG+TGG 0.572019 1.2:-7537813 MS.gene016115:CDS
GTGGGATGTTGTCTCAAATG+AGG 0.577758 1.2:-7537794 MS.gene016115:intron
GTGATCTCGGGAAACGGCAA+TGG 0.578024 1.2:+7538241 None:intergenic
CAGAATGGAAAATTCAGCTA+TGG 0.581697 1.2:-7539990 MS.gene016115:CDS
TTTACAGGAACTTGGAGAGT+CGG 0.596161 1.2:-7538076 MS.gene016115:intron
ACCAAACCGATGAGAGGCAA+AGG 0.597114 1.2:-7538211 MS.gene016115:CDS
TTTGCTTGTTGCAAATGTTG+GGG 0.604673 1.2:-7538658 MS.gene016115:CDS
AGGCAAAGGATAGAAGATGC+GGG 0.610771 1.2:-7538197 MS.gene016115:CDS
TCCAGAGCTGTTATATGCAG+GGG 0.611886 1.2:-7538633 MS.gene016115:CDS
AACCAGACCAAACCGATGAG+AGG 0.614896 1.2:-7538217 MS.gene016115:CDS
ACTGGCTAGTGACGGACTGT+GGG 0.617935 1.2:-7537812 MS.gene016115:CDS
GAGGCAAAGGATAGAAGATG+CGG 0.618851 1.2:-7538198 MS.gene016115:CDS
TTTCTTATACTGGCTAGTGA+CGG 0.622894 1.2:-7537820 MS.gene016115:CDS
AGAGCTGTTATATGCAGGGG+TGG 0.625035 1.2:-7538630 MS.gene016115:CDS
CATTGAAGATCTCTTGCCAG+GGG 0.630301 1.2:+7539956 None:intergenic
ATACACCTGTTAGTGGTGGA+GGG 0.634978 1.2:-7541582 MS.gene016115:CDS
TGATTTCAGAAATTCAGAGT+CGG 0.642009 1.2:+7538743 None:intergenic
ACAGGAACTTGGAGAGTCGG+TGG 0.642115 1.2:-7538073 MS.gene016115:intron
ATGCAGAAGAAGCAGCAAAG+AGG 0.661189 1.2:-7537050 MS.gene016115:CDS
GATGATACACCTGTTAGTGG+TGG 0.682529 1.2:-7541586 MS.gene016115:CDS
ATGAAAGAAGCGTATCAGAG+AGG 0.696477 1.2:-7537024 MS.gene016115:CDS
TGTCAGAAATGAATTTCGGG+TGG 0.709462 1.2:+7538907 None:intergenic
TTAAAACTTTCAGGTCATGG+TGG 0.715764 1.2:-7538981 MS.gene016115:intron
CAAAGGATAGAAGATGCGGG+AGG 0.739247 1.2:-7538194 MS.gene016115:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATGTAATTTAAAAACATAT+TGG + chr1.2:7541282-7541301 None:intergenic 10.0%
!!! TAAATTTTTATTTTGTATGT+GGG - chr1.2:7541143-7541162 MS.gene016115:intron 10.0%
!!! TTAAATTTTTATTTTGTATG+TGG - chr1.2:7541142-7541161 MS.gene016115:intron 10.0%
!! AAAATTAACCTACATATTTA+TGG - chr1.2:7540701-7540720 MS.gene016115:intron 15.0%
!! AATATACCTATTATAAATGA+AGG - chr1.2:7539556-7539575 MS.gene016115:intron 15.0%
!! TAAAATGTTACAAAGTAAAT+GGG + chr1.2:7541125-7541144 None:intergenic 15.0%
!! TTAAAATGTTACAAAGTAAA+TGG + chr1.2:7541126-7541145 None:intergenic 15.0%
!!! ATATTTTTTTTCTATCTCTA+TGG - chr1.2:7540463-7540482 MS.gene016115:intron 15.0%
!!! GTTTTATCATTTTTGTTTAA+TGG - chr1.2:7537080-7537099 MS.gene016115:CDS 15.0%
!!! GTTTTTTTTTTACTATTTCT+TGG - chr1.2:7538406-7538425 MS.gene016115:intron 15.0%
!!! TAATATTTTACAAAAATGCT+AGG + chr1.2:7540972-7540991 None:intergenic 15.0%
!!! TCTAATTTTTATTTTATCCA+TGG - chr1.2:7541326-7541345 MS.gene016115:intron 15.0%
!!! TTATTCTTAGGATTTTAAAT+TGG - chr1.2:7537317-7537336 MS.gene016115:intron 15.0%
!! AAAAAATATCGGAAATAAAC+AGG - chr1.2:7541358-7541377 MS.gene016115:intron 20.0%
!! AAAATGTTACAAAGTAAATG+GGG + chr1.2:7541124-7541143 None:intergenic 20.0%
!! ATTAGCGAACAAATTTAAAA+GGG - chr1.2:7540988-7541007 MS.gene016115:intron 20.0%
!! ATTGAAGAAAATCAGTTTAA+AGG + chr1.2:7539744-7539763 None:intergenic 20.0%
!! CTGTGTAAAAAAAATACAAA+TGG + chr1.2:7539798-7539817 None:intergenic 20.0%
!! TATATTATAGTATCAAGCAT+AGG + chr1.2:7539542-7539561 None:intergenic 20.0%
!! TATTAGCGAACAAATTTAAA+AGG - chr1.2:7540987-7541006 MS.gene016115:intron 20.0%
!! TATTTATCGGAAAAAGAAAA+AGG + chr1.2:7540849-7540868 None:intergenic 20.0%
!! TTTGTTTGGTAAAAAATAGT+GGG - chr1.2:7537372-7537391 MS.gene016115:intron 20.0%
!!! AAGGTTTTAAATTGATATTG+CGG - chr1.2:7537432-7537451 MS.gene016115:intron 20.0%
!!! ATAAAGTATAAATCTGGTTT+TGG - chr1.2:7539062-7539081 MS.gene016115:intron 20.0%
!!! ATGTTGTGATTTTGATATTA+TGG - chr1.2:7537899-7537918 MS.gene016115:intron 20.0%
!!! ATTCATTAATAGCAAGTTTT+TGG - chr1.2:7539253-7539272 MS.gene016115:intron 20.0%
!!! ATTTGATTTTCTAAAACTTG+AGG - chr1.2:7540019-7540038 MS.gene016115:intron 20.0%
!!! ATTTTCCTTTTGAAGTTATT+GGG - chr1.2:7538901-7538920 MS.gene016115:CDS 20.0%
!!! TGATTTGTATCAAGATTATT+TGG - chr1.2:7540906-7540925 MS.gene016115:intron 20.0%
!!! TGTTTAATGGTTTTTGTTTA+AGG - chr1.2:7537093-7537112 MS.gene016115:intron 20.0%
!!! TTTAAAACCATTGTTATTCT+CGG - chr1.2:7538015-7538034 MS.gene016115:CDS 20.0%
!!! TTTAATCCTTTAAGAAGTAT+TGG - chr1.2:7539323-7539342 MS.gene016115:intron 20.0%
!!! TTTTTATTTTATCCATGGAA+TGG - chr1.2:7541331-7541350 MS.gene016115:intron 20.0%
! AAAAATTAGAGAAGACGTTA+TGG + chr1.2:7541316-7541335 None:intergenic 25.0%
! AAGGAAAGGAAAAAAAACAA+AGG + chr1.2:7540830-7540849 None:intergenic 25.0%
! AATCTACATAAGGAAAGTAA+AGG + chr1.2:7541066-7541085 None:intergenic 25.0%
! ACTTGTGGATGAAATATAAA+GGG - chr1.2:7540151-7540170 MS.gene016115:intron 25.0%
! ACTTTCCTTATGTAGATTAA+AGG - chr1.2:7541068-7541087 MS.gene016115:intron 25.0%
! AGAGATGAAATATCAAAGAA+TGG + chr1.2:7540636-7540655 None:intergenic 25.0%
! AGCTAACCTTCATTTATAAT+AGG + chr1.2:7539565-7539584 None:intergenic 25.0%
! ATTGTTTGATTAGATTGTCA+AGG - chr1.2:7540190-7540209 MS.gene016115:intron 25.0%
! CAATTACTGCAACAATATAA+AGG + chr1.2:7537979-7537998 None:intergenic 25.0%
! CAATTCATTTATATCTCTTG+TGG + chr1.2:7540888-7540907 None:intergenic 25.0%
! CGAAAATGCACTATATTTAT+CGG + chr1.2:7540862-7540881 None:intergenic 25.0%
! CTTAAAGCCTCTTAAAAAAA+GGG - chr1.2:7541015-7541034 MS.gene016115:intron 25.0%
! GGAATGGAAACAAAAAATAT+CGG - chr1.2:7541347-7541366 MS.gene016115:intron 25.0%
! GTAAAAAAAATACAAATGGC+AGG + chr1.2:7539794-7539813 None:intergenic 25.0%
! GTAAATAAAAAAGCCAGAAT+AGG + chr1.2:7538483-7538502 None:intergenic 25.0%
! GTGAAAAATTATCTTGATGT+GGG - chr1.2:7537721-7537740 MS.gene016115:intron 25.0%
! TAAAACCATGATTATTCTCA+AGG - chr1.2:7537821-7537840 MS.gene016115:CDS 25.0%
! TAAAACCTTGAGAATAATCA+TGG + chr1.2:7537829-7537848 None:intergenic 25.0%
! TAAAATCCTAAGAATAACCA+TGG + chr1.2:7537314-7537333 None:intergenic 25.0%
! TACTTAAAACCATACTTTAC+AGG - chr1.2:7540488-7540507 MS.gene016115:intron 25.0%
! TCTTAAAGCCTCTTAAAAAA+AGG - chr1.2:7541014-7541033 MS.gene016115:intron 25.0%
! TGAAAAATTATCTTGATGTG+GGG - chr1.2:7537722-7537741 MS.gene016115:intron 25.0%
! TGTCTCATAAAGTATAAATC+TGG - chr1.2:7539056-7539075 MS.gene016115:intron 25.0%
! TTAAAACCATGGTTATTCTT+AGG - chr1.2:7537305-7537324 MS.gene016115:intron 25.0%
! TTAAAACCTTAAACAAACCA+TGG + chr1.2:7537172-7537191 None:intergenic 25.0%
! TTATATTGTTGCAGTAATTG+TGG - chr1.2:7537979-7537998 MS.gene016115:intron 25.0%
!! AAAAAAGTTTGAGTTAGAGT+TGG + chr1.2:7541464-7541483 None:intergenic 25.0%
!! AACATCTTATTAGTTCTCTA+TGG + chr1.2:7538840-7538859 None:intergenic 25.0%
!! AACTTTTCGATTTCAAGAAT+TGG - chr1.2:7540278-7540297 MS.gene016115:intron 25.0%
!! ACATAGAATGGTTTTTCTTA+AGG - chr1.2:7537413-7537432 MS.gene016115:intron 25.0%
!! ACATCTTATTAGTTCTCTAT+GGG + chr1.2:7538839-7538858 None:intergenic 25.0%
!! ATGTTTTTCTCAATTCTCAA+CGG + chr1.2:7540255-7540274 None:intergenic 25.0%
!! CATTTAGAAAGAAAAGCATA+GGG + chr1.2:7540105-7540124 None:intergenic 25.0%
!! CTTTCTTGTTTAAAACTTTC+AGG - chr1.2:7539589-7539608 MS.gene016115:intron 25.0%
!! CTTTGTTTGGTAAAAAATAG+TGG - chr1.2:7537371-7537390 MS.gene016115:intron 25.0%
!! TAAATTGATATTGCGGTTTT+AGG - chr1.2:7537439-7537458 MS.gene016115:intron 25.0%
!! TCATTTAGAAAGAAAAGCAT+AGG + chr1.2:7540106-7540125 None:intergenic 25.0%
!! TCTTTGTATTTTTCTGATCA+TGG - chr1.2:7538353-7538372 MS.gene016115:intron 25.0%
!! TGTGTTACTACATTTGAATT+TGG - chr1.2:7540217-7540236 MS.gene016115:intron 25.0%
!! TTAAAACCATTGTTATTCTC+GGG - chr1.2:7538016-7538035 MS.gene016115:CDS 25.0%
!! TTTTATGAGACAAGAATTGA+CGG - chr1.2:7538652-7538671 MS.gene016115:CDS 25.0%
!!! AAGGTTTTAAATTGATGTTG+CGG - chr1.2:7537112-7537131 MS.gene016115:intron 25.0%
!!! ACTTGCTATTAATGAATTGA+AGG + chr1.2:7539250-7539269 None:intergenic 25.0%
!!! ACTTTTTTCTACTTTTCTTC+AGG - chr1.2:7541476-7541495 MS.gene016115:intron 25.0%
!!! ATTTTTATTTTGTATGTGGG+TGG - chr1.2:7541146-7541165 MS.gene016115:intron 25.0%
!!! CATTTTAATACCATGGTTAT+AGG - chr1.2:7538209-7538228 MS.gene016115:CDS 25.0%
!!! GATTTTCCTTTTGAAGTTAT+TGG - chr1.2:7538900-7538919 MS.gene016115:CDS 25.0%
!!! GTTGTTTTGATTATTCTGAT+CGG - chr1.2:7539084-7539103 MS.gene016115:intron 25.0%
!!! TATTTTTTGTTTCCATTCCA+TGG + chr1.2:7541346-7541365 None:intergenic 25.0%
!!! TTCTGGCTTTTTTATTTACT+AGG - chr1.2:7538484-7538503 MS.gene016115:intron 25.0%
!!! TTTAAATTGTTGTTTCGATG+CGG - chr1.2:7537845-7537864 MS.gene016115:CDS 25.0%
!!! TTTCCTTAATTTGTTTCTGT+CGG - chr1.2:7538875-7538894 MS.gene016115:intron 25.0%
!!! TTTTGAAGTTATTGGGAAAT+GGG - chr1.2:7538908-7538927 MS.gene016115:CDS 25.0%
AAAAACCATGGTTATTCTCA+AGG - chr1.2:7537623-7537642 MS.gene016115:intron 30.0%
AACAACAATACCTATAACCA+TGG + chr1.2:7538222-7538241 None:intergenic 30.0%
AATAATCAAAACAGAGATGC+TGG - chr1.2:7539862-7539881 MS.gene016115:intron 30.0%
AGAGCAGTGTATTTAAATTG+TGG + chr1.2:7539503-7539522 None:intergenic 30.0%
ATCGGAAAAAGAAAAAGGAA+AGG + chr1.2:7540844-7540863 None:intergenic 30.0%
CAACATAACCACAACATAAA+AGG + chr1.2:7537885-7537904 None:intergenic 30.0%
CAATTGTAGTCGCAATATAA+AGG + chr1.2:7537783-7537802 None:intergenic 30.0%
CACTTGTGGATGAAATATAA+AGG - chr1.2:7540150-7540169 MS.gene016115:intron 30.0%
CATTTCCCAATAACTTCAAA+AGG + chr1.2:7538909-7538928 None:intergenic 30.0%
CCTAAAGTCGGAAAAATTAA+AGG + chr1.2:7538513-7538532 None:intergenic 30.0%
CGTGAAAAATTATCTTGATG+TGG - chr1.2:7537720-7537739 MS.gene016115:intron 30.0%
GAAAATTGTCTTGATGTTGT+GGG - chr1.2:7537504-7537523 MS.gene016115:intron 30.0%
GGCTGATCAAATTACTAAAT+AGG + chr1.2:7539654-7539673 None:intergenic 30.0%
TAAAACCTTGAGAATAACCA+TGG + chr1.2:7537631-7537650 None:intergenic 30.0%
TAATCGTTATGGTTGTCAAA+TGG - chr1.2:7539995-7540014 MS.gene016115:intron 30.0%
TAATGTCATTCATACTTGGA+AGG - chr1.2:7538245-7538264 MS.gene016115:intron 30.0%
TACCATCAAAAACTCCAAAA+AGG + chr1.2:7538699-7538718 None:intergenic 30.0%
TAGAGTTGGATAAGACATTA+GGG + chr1.2:7541450-7541469 None:intergenic 30.0%
TCATTGAATTGACCTAAAGT+CGG + chr1.2:7538525-7538544 None:intergenic 30.0%
TGAAAATTGTCTTGATGTTG+TGG - chr1.2:7537503-7537522 MS.gene016115:intron 30.0%
TGAGGAAATCATAATCGTTA+TGG - chr1.2:7540037-7540056 MS.gene016115:intron 30.0%
TGATTTCAGAAATTCAGAGT+CGG + chr1.2:7539839-7539858 None:intergenic 30.0%
TGCTATGATTAAACCAATTG+AGG - chr1.2:7541506-7541525 MS.gene016115:intron 30.0%
TGGTTAATGTCATTCATACT+TGG - chr1.2:7538241-7538260 MS.gene016115:CDS 30.0%
TTAAAGGATCAAACTGTGAT+AGG + chr1.2:7539728-7539747 None:intergenic 30.0%
TTAGAGTTGGATAAGACATT+AGG + chr1.2:7541451-7541470 None:intergenic 30.0%
TTCTCTTGAGTTTCTTATAC+TGG - chr1.2:7540749-7540768 MS.gene016115:intron 30.0%
! ATAAGCTAGCTTACATAGAA+TGG - chr1.2:7537401-7537420 MS.gene016115:intron 30.0%
! ATGGTTATAGGTATTGTTGT+TGG - chr1.2:7538221-7538240 MS.gene016115:CDS 30.0%
! ATTCAGGTGTGTTTCTAATA+TGG - chr1.2:7540596-7540615 MS.gene016115:intron 30.0%
! CAAACGGAAATTTAAAACCA+TGG - chr1.2:7537294-7537313 MS.gene016115:intron 30.0%
! CAACAGAAAGTATAAGACAA+TGG + chr1.2:7539194-7539213 None:intergenic 30.0%
! GGTGCATGTTTTTCTTTATA+TGG - chr1.2:7539274-7539293 MS.gene016115:intron 30.0%
! GTGAATGTTAACTTGATATG+CGG - chr1.2:7538109-7538128 MS.gene016115:intron 30.0%
! TAAAACCATTGTTATTCTCG+GGG - chr1.2:7538017-7538036 MS.gene016115:CDS 30.0%
! TCATCTTATTGTTAGCTCTT+GGG - chr1.2:7540431-7540450 MS.gene016115:intron 30.0%
! TCTTTGAGAATAATTTCGAG+AGG - chr1.2:7539163-7539182 MS.gene016115:intron 30.0%
! TGTTTAAAACTTTCAGGTCA+TGG - chr1.2:7539595-7539614 MS.gene016115:intron 30.0%
! TTTAAATTGTTGTTGCGATG+CGG - chr1.2:7537647-7537666 MS.gene016115:intron 30.0%
!! ACTATTTTTCGTATCACTTG+TGG - chr1.2:7540136-7540155 MS.gene016115:intron 30.0%
!! CCTTTAATTTTTCCGACTTT+AGG - chr1.2:7538510-7538529 MS.gene016115:intron 30.0%
!! CTATCCATGCTACTTATTTT+TGG - chr1.2:7538751-7538770 MS.gene016115:CDS 30.0%
!! GAATAACCATGGTTTGTTTA+AGG - chr1.2:7537163-7537182 MS.gene016115:intron 30.0%
!! TTAAATTGTTGTTTCGATGC+GGG - chr1.2:7537846-7537865 MS.gene016115:CDS 30.0%
!! TTGGTGTCAGAAATGAATTT+CGG + chr1.2:7539679-7539698 None:intergenic 30.0%
!!! AAGAGAACCCTTTTTTTAAG+AGG + chr1.2:7541025-7541044 None:intergenic 30.0%
!!! CTTTTGAAGTTATTGGGAAA+TGG - chr1.2:7538907-7538926 MS.gene016115:CDS 30.0%
!!! TTGCATGTTGTGTTACTTTT+CGG - chr1.2:7537348-7537367 MS.gene016115:intron 30.0%
AACAAACCATGGTTATTCTC+AGG + chr1.2:7537161-7537180 None:intergenic 35.0%
AACATTGCTTTCAGTGTTTC+CGG + chr1.2:7541224-7541243 None:intergenic 35.0%
AACCATACTTTACAGGAACT+TGG - chr1.2:7540495-7540514 MS.gene016115:intron 35.0%
AAGAACCTTGATTGTTCATC+AGG + chr1.2:7541617-7541636 None:intergenic 35.0%
ACCTCCAAAAATAAGTAGCA+TGG + chr1.2:7538758-7538777 None:intergenic 35.0%
ACTACAATTGTAGTTGCAGA+CGG - chr1.2:7537793-7537812 MS.gene016115:intron 35.0%
ATATGTATCTACAGCCAGAA+TGG - chr1.2:7538574-7538593 MS.gene016115:intron 35.0%
ATCAATCAGAAATGACTCGT+TGG + chr1.2:7541398-7541417 None:intergenic 35.0%
CAACATAAAAGGCAACAAAC+AGG + chr1.2:7537874-7537893 None:intergenic 35.0%
CAACATTTGCAACAAGCAAA+CGG + chr1.2:7539921-7539940 None:intergenic 35.0%
CAACTGCAGTCACAATATAA+AGG + chr1.2:7537268-7537287 None:intergenic 35.0%
CAAGAGCCAATACTTCTTAA+AGG + chr1.2:7539332-7539351 None:intergenic 35.0%
CAATTGTAGCCGGAATATAA+AGG + chr1.2:7538176-7538195 None:intergenic 35.0%
CACACATAAAGAGGAAAGTT+TGG - chr1.2:7539017-7539036 MS.gene016115:intron 35.0%
CAGAATGGAAAATTCAGCTA+TGG - chr1.2:7538589-7538608 MS.gene016115:intron 35.0%
CTGACAGCAATTAAAAACCA+TGG - chr1.2:7537611-7537630 MS.gene016115:intron 35.0%
CTGCAAGACCATAAATATGT+AGG + chr1.2:7540712-7540731 None:intergenic 35.0%
CTTCCAAAGCCTTTATATTC+CGG - chr1.2:7538164-7538183 MS.gene016115:intron 35.0%
GAATGTCTTTAGTCCTATTC+TGG - chr1.2:7538467-7538486 MS.gene016115:intron 35.0%
GGTTCAAGACGAATGTTTAT+TGG - chr1.2:7538374-7538393 MS.gene016115:intron 35.0%
GTAGCATGGATAGAAAGAAA+TGG + chr1.2:7538744-7538763 None:intergenic 35.0%
GTGTATTTAAATTGTGGCCA+TGG + chr1.2:7539497-7539516 None:intergenic 35.0%
TAAAACCCCGAGAATAACAA+TGG + chr1.2:7538025-7538044 None:intergenic 35.0%
TAAGGAAACACTAAGTCACA+TGG + chr1.2:7538946-7538965 None:intergenic 35.0%
TAGAAACACACCTGAATTTC+CGG + chr1.2:7540593-7540612 None:intergenic 35.0%
TAGTAGCTGCATAATCGTTA+TGG - chr1.2:7539984-7540003 MS.gene016115:CDS 35.0%
TCGCTCCTTTAATCTACATA+AGG + chr1.2:7541076-7541095 None:intergenic 35.0%
TTATGGTTGTCAAATGGTTC+TGG - chr1.2:7540054-7540073 MS.gene016115:intron 35.0%
TTTCCTTATGCAATGCTTCT+AGG - chr1.2:7538958-7538977 MS.gene016115:CDS 35.0%
TTTGATCCTGAGAATAACCA+TGG - chr1.2:7537152-7537171 MS.gene016115:intron 35.0%
! AGGATTTTAAATTGGCGTTG+CGG - chr1.2:7537325-7537344 MS.gene016115:intron 35.0%
! CATAGCTGAATTTTCCATTC+TGG + chr1.2:7538591-7538610 None:intergenic 35.0%
! CTACATATTTATGGTCTTGC+AGG - chr1.2:7540710-7540729 MS.gene016115:intron 35.0%
! GTCATCTTATTGTTAGCTCT+TGG - chr1.2:7540430-7540449 MS.gene016115:intron 35.0%
! GTTGTAGTGGAAACATTGAT+CGG - chr1.2:7538794-7538813 MS.gene016115:intron 35.0%
! GTTTGCTTGTTGCAAATGTT+GGG - chr1.2:7539920-7539939 MS.gene016115:CDS 35.0%
! TCTTGTCTTTTGTGGTTGTT+TGG - chr1.2:7537465-7537484 MS.gene016115:intron 35.0%
! TGGTGTCAGAAATGAATTTC+GGG + chr1.2:7539678-7539697 None:intergenic 35.0%
! TGTTTTATCACCTTCAAGTC+AGG - chr1.2:7536959-7536978 MS.gene016115:CDS 35.0%
! TTAAAACTTTCAGGTCATGG+TGG - chr1.2:7539598-7539617 MS.gene016115:intron 35.0%
! TTAAATTGTTGTTGCGATGC+GGG - chr1.2:7537648-7537667 MS.gene016115:intron 35.0%
! TTTCTTATACTGGCTAGTGA+CGG - chr1.2:7540759-7540778 MS.gene016115:intron 35.0%
! TTTGCTTGTTGCAAATGTTG+GGG - chr1.2:7539921-7539940 MS.gene016115:CDS 35.0%
!! GTTACGTTGCGATTTTGATA+TGG - chr1.2:7538087-7538106 MS.gene016115:intron 35.0%
!! GTTTGTTGCCTTTTATGTTG+TGG - chr1.2:7537874-7537893 MS.gene016115:intron 35.0%
!! TTAGGTTGTCTTGTCTTTTG+TGG - chr1.2:7537457-7537476 MS.gene016115:intron 35.0%
!!! ATTCGCAACTTGGTTTTATG+TGG - chr1.2:7538324-7538343 MS.gene016115:intron 35.0%
!!! ATTTTTGGAGGTACTAAGCA+AGG - chr1.2:7538766-7538785 MS.gene016115:intron 35.0%
!!! TCCATGCTACTTATTTTTGG+AGG - chr1.2:7538754-7538773 MS.gene016115:CDS 35.0%
!!! TGTTACTTTTCGGCTTTGTT+TGG - chr1.2:7537358-7537377 MS.gene016115:intron 35.0%
!!! TTTTTGGAGGTACTAAGCAA+GGG - chr1.2:7538767-7538786 MS.gene016115:intron 35.0%
AAACGTAACCACAACACAGA+AGG + chr1.2:7537687-7537706 None:intergenic 40.0%
AACTAGAGAGACTGCATTTC+CGG - chr1.2:7541202-7541221 MS.gene016115:intron 40.0%
ACTGCAGTTGTAGTTGCAAA+CGG - chr1.2:7537278-7537297 MS.gene016115:intron 40.0%
AGAAGAAAAACCTCCTGAGA+CGG + chr1.2:7539133-7539152 None:intergenic 40.0%
AGTAAAGGCGAAGGTCTATT+TGG + chr1.2:7541051-7541070 None:intergenic 40.0%
ATGCCTTCACAAATTGCCTA+TGG - chr1.2:7539429-7539448 MS.gene016115:intron 40.0%
CAACACAAAAGGCAACAAAC+AGG + chr1.2:7538065-7538084 None:intergenic 40.0%
CAACGTAACCACAACACAAA+AGG + chr1.2:7538076-7538095 None:intergenic 40.0%
CAGCAACAACGTATTGCTTA+AGG + chr1.2:7540568-7540587 None:intergenic 40.0%
CATAAGGAAAGTAAAGGCGA+AGG + chr1.2:7541060-7541079 None:intergenic 40.0%
CCACCGACAGAAACAAATTA+AGG + chr1.2:7538881-7538900 None:intergenic 40.0%
CGTTTCCTGATGAACAATCA+AGG - chr1.2:7541609-7541628 MS.gene016115:CDS 40.0%
CTACAGACCTATTGCAGATT+TGG + chr1.2:7539698-7539717 None:intergenic 40.0%
CTCCAAGTTCCTGTAAAGTA+TGG + chr1.2:7540500-7540519 None:intergenic 40.0%
CTTCACAAATTGCCTATGGT+GGG - chr1.2:7539433-7539452 MS.gene016115:intron 40.0%
CTTGATGTTGTGGGAAATTG+AGG - chr1.2:7537513-7537532 MS.gene016115:intron 40.0%
GATTTATTTACCCCCACCAT+AGG + chr1.2:7539448-7539467 None:intergenic 40.0%
GCCACAATGACGTGTTTATA+GGG + chr1.2:7539389-7539408 None:intergenic 40.0%
GGCTGAAATGGCAATTGTTA+TGG - chr1.2:7541167-7541186 MS.gene016115:intron 40.0%
TAGCCGGAATATAAAGGCTT+TGG + chr1.2:7538170-7538189 None:intergenic 40.0%
TCTGACACCAAATCTGCAAT+AGG - chr1.2:7539688-7539707 MS.gene016115:intron 40.0%
TCTGTGTTGTGGTTACGTTT+CGG - chr1.2:7537687-7537706 MS.gene016115:intron 40.0%
TGATATGCGGTTGCAATTGT+GGG - chr1.2:7538122-7538141 MS.gene016115:intron 40.0%
TGGGAAATTGAGGATAGATG+CGG - chr1.2:7537523-7537542 MS.gene016115:intron 40.0%
TGTCAGAAATGAATTTCGGG+TGG + chr1.2:7539675-7539694 None:intergenic 40.0%
TTCACAAATTGCCTATGGTG+GGG - chr1.2:7539434-7539453 MS.gene016115:intron 40.0%
TTCTATCCTTTGCCTCTCAT+CGG + chr1.2:7540377-7540396 None:intergenic 40.0%
TTGATATGCGGTTGCAATTG+TGG - chr1.2:7538121-7538140 MS.gene016115:intron 40.0%
TTGCAATTGTGGGTGTGATA+TGG - chr1.2:7538132-7538151 MS.gene016115:intron 40.0%
TTGGATAAGACATTAGGGCA+GGG + chr1.2:7541445-7541464 None:intergenic 40.0%
TTGTGGGTGTGATATGGTTT+CGG - chr1.2:7538138-7538157 MS.gene016115:intron 40.0%
TTTACAGGAACTTGGAGAGT+CGG - chr1.2:7540503-7540522 MS.gene016115:intron 40.0%
! ATGAAAGAAGCGTATCAGAG+AGG - chr1.2:7541555-7541574 MS.gene016115:intron 40.0%
! CAATTGTGGTTGTGTTGTTG+AGG - chr1.2:7537549-7537568 MS.gene016115:intron 40.0%
! CGTGTTTATAGGGCAGATTT+TGG + chr1.2:7539379-7539398 None:intergenic 40.0%
! CGTTTGCTTGTTGCAAATGT+TGG - chr1.2:7539919-7539938 MS.gene016115:CDS 40.0%
! TATGGTCTTGCAGGAAGAAA+AGG - chr1.2:7540719-7540738 MS.gene016115:intron 40.0%
! TTTGGTCTGGTTTGTGATCT+CGG + chr1.2:7540354-7540373 None:intergenic 40.0%
!! AAGCCTAGAAGCATTGCATA+AGG + chr1.2:7538964-7538983 None:intergenic 40.0%
!! CAGACGGCATTTTAATACCA+TGG - chr1.2:7538202-7538221 MS.gene016115:CDS 40.0%
!! CCTTAATTTGTTTCTGTCGG+TGG - chr1.2:7538878-7538897 MS.gene016115:intron 40.0%
!! GTTTGTTGCCTTTTGTGTTG+TGG - chr1.2:7538065-7538084 MS.gene016115:CDS 40.0%
!!! GGCCTTTTTGGAGTTTTTGA+TGG - chr1.2:7538694-7538713 MS.gene016115:CDS 40.0%
AAACACGTCATTGTGGCCTA+TGG - chr1.2:7539392-7539411 MS.gene016115:intron 45.0%
AACATTGATCGGACACGTGA+TGG - chr1.2:7538805-7538824 MS.gene016115:intron 45.0%
ACATGCACGCACACATAAAG+AGG - chr1.2:7539008-7539027 MS.gene016115:intron 45.0%
ACTCCAGAGCTGTTATATGC+AGG - chr1.2:7539944-7539963 MS.gene016115:CDS 45.0%
AGGCAAAGGATAGAAGATGC+GGG - chr1.2:7540382-7540401 MS.gene016115:intron 45.0%
ATGCAGAAGAAGCAGCAAAG+AGG - chr1.2:7541529-7541548 MS.gene016115:intron 45.0%
CAAACGGTCACCAACAAGAA+TGG + chr1.2:7539905-7539924 None:intergenic 45.0%
CAACACAGAAGGCAACAAAC+AGG + chr1.2:7537676-7537695 None:intergenic 45.0%
CATTGAAGATCTCTTGCCAG+GGG + chr1.2:7538626-7538645 None:intergenic 45.0%
CCACCATAGGCAATTTGTGA+AGG + chr1.2:7539435-7539454 None:intergenic 45.0%
CCATTGAAGATCTCTTGCCA+GGG + chr1.2:7538627-7538646 None:intergenic 45.0%
CCTTCACAAATTGCCTATGG+TGG - chr1.2:7539432-7539451 MS.gene016115:intron 45.0%
CTCCAGAGCTGTTATATGCA+GGG - chr1.2:7539945-7539964 MS.gene016115:CDS 45.0%
GAGGCAAAGGATAGAAGATG+CGG - chr1.2:7540381-7540400 MS.gene016115:intron 45.0%
GATGATACACCTGTTAGTGG+TGG - chr1.2:7536993-7537012 MS.gene016115:CDS 45.0%
GCAATACGTTGTTGCTGATC+CGG - chr1.2:7540571-7540590 MS.gene016115:intron 45.0%
GCAGTAATTGTGGTTGCAGA+TGG - chr1.2:7537989-7538008 MS.gene016115:intron 45.0%
GCCCTATAAACACGTCATTG+TGG - chr1.2:7539385-7539404 MS.gene016115:intron 45.0%
GCTACAATTGCAGTTGCAGA+CGG - chr1.2:7538186-7538205 MS.gene016115:CDS 45.0%
GCTGATGATACACCTGTTAG+TGG - chr1.2:7536990-7537009 MS.gene016115:CDS 45.0%
GCTTCTTCTGCATCCTCAAT+TGG + chr1.2:7541522-7541541 None:intergenic 45.0%
GGCCACAATGACGTGTTTAT+AGG + chr1.2:7539390-7539409 None:intergenic 45.0%
GTGGGATGTTGTCTCAAATG+AGG - chr1.2:7540785-7540804 MS.gene016115:intron 45.0%
GTTATATGCAGGGGTGGAAA+TGG - chr1.2:7539955-7539974 MS.gene016115:CDS 45.0%
GTTGGATAAGACATTAGGGC+AGG + chr1.2:7541446-7541465 None:intergenic 45.0%
TAAGACATTAGGGCAGGGTT+TGG + chr1.2:7541440-7541459 None:intergenic 45.0%
TCACAAATTGCCTATGGTGG+GGG - chr1.2:7539435-7539454 MS.gene016115:intron 45.0%
TCCAGAGCTGTTATATGCAG+GGG - chr1.2:7539946-7539965 MS.gene016115:CDS 45.0%
TCCATTGAAGATCTCTTGCC+AGG + chr1.2:7538628-7538647 None:intergenic 45.0%
TCTGCAACTGCAATTGTAGC+CGG + chr1.2:7538186-7538205 None:intergenic 45.0%
TCTTCGTCTCGTAATAGCTC+TGG - chr1.2:7541633-7541652 MS.gene016115:CDS 45.0%
TCTTGATATGCTGCTGCATG+TGG - chr1.2:7537929-7537948 MS.gene016115:intron 45.0%
TGTTGCTGATCCGGAAATTC+AGG - chr1.2:7540580-7540599 MS.gene016115:intron 45.0%
TTGACCAGTGTTGTCGATGA+AGG - chr1.2:7539349-7539368 MS.gene016115:intron 45.0%
TTGCGGTTGTATGTTGTACG+AGG - chr1.2:7537129-7537148 MS.gene016115:intron 45.0%
TTGTATGTGGGTGGCTGAAA+TGG - chr1.2:7541155-7541174 MS.gene016115:intron 45.0%
! ACAAGAATTGACGGCGTTGA+TGG - chr1.2:7538661-7538680 MS.gene016115:CDS 45.0%
! ATACACCTGTTAGTGGTGGA+GGG - chr1.2:7536997-7537016 MS.gene016115:CDS 45.0%
! GTTTGTTGCCTTCTGTGTTG+TGG - chr1.2:7537676-7537695 MS.gene016115:intron 45.0%
! TGGTTTGTGATCTCGGGAAA+CGG + chr1.2:7540347-7540366 None:intergenic 45.0%
! TTGGTCTGGTTTGTGATCTC+GGG + chr1.2:7540353-7540372 None:intergenic 45.0%
!!! CTTTTTTCGAACACCGTCTC+AGG - chr1.2:7539117-7539136 MS.gene016115:intron 45.0%
!!! GGGGTTTTAAGTTGCTGTTG+TGG - chr1.2:7538036-7538055 MS.gene016115:CDS 45.0%
!! AAAAAAAATTAAATAATTAC+AGG + chr1.2:7539217-7539236 None:intergenic 5.0%
AACCAGACCAAACCGATGAG+AGG - chr1.2:7540362-7540381 MS.gene016115:intron 50.0%
ACCAAACCGATGAGAGGCAA+AGG - chr1.2:7540368-7540387 MS.gene016115:intron 50.0%
ACCCCTGCATATAACAGCTC+TGG + chr1.2:7539950-7539969 None:intergenic 50.0%
AGAGCTGTTATATGCAGGGG+TGG - chr1.2:7539949-7539968 MS.gene016115:CDS 50.0%
ATGCAGGGGTGGAAATGGTA+AGG - chr1.2:7539960-7539979 MS.gene016115:CDS 50.0%
CAAAGGATAGAAGATGCGGG+AGG - chr1.2:7540385-7540404 MS.gene016115:intron 50.0%
CCAGTGTTGTCGATGAAGGA+AGG - chr1.2:7539353-7539372 MS.gene016115:intron 50.0%
CCATTGTGGTTGTGTTGCAG+AGG + chr1.2:7537206-7537225 None:intergenic 50.0%
CCCTGGCAAGAGATCTTCAA+TGG - chr1.2:7538624-7538643 MS.gene016115:intron 50.0%
CCTCTGCAACACAACCACAA+TGG - chr1.2:7537203-7537222 MS.gene016115:intron 50.0%
CCTTCCTTCATCGACAACAC+TGG + chr1.2:7539356-7539375 None:intergenic 50.0%
GATACACCTGTTAGTGGTGG+AGG - chr1.2:7536996-7537015 MS.gene016115:CDS 50.0%
GATAGATGCGGCTGCAATTG+TGG - chr1.2:7537535-7537554 MS.gene016115:intron 50.0%
GCTTCCACTGCCATTCTTGT+TGG - chr1.2:7539892-7539911 MS.gene016115:CDS 50.0%
GTCACCAACAAGAATGGCAG+TGG + chr1.2:7539899-7539918 None:intergenic 50.0%
TATGGATATGCTAGCTCCCC+TGG - chr1.2:7538607-7538626 MS.gene016115:intron 50.0%
TGCTCTGCAGATTCGCAACT+TGG - chr1.2:7538314-7538333 MS.gene016115:intron 50.0%
TGGGTGTGATATGGTTTCGG+CGG - chr1.2:7538141-7538160 MS.gene016115:intron 50.0%
! ATTTGTGAAGGCATGCTCCG+CGG + chr1.2:7539423-7539442 None:intergenic 50.0%
! GCAGCATGAACCTGACTTGA+AGG + chr1.2:7536972-7536991 None:intergenic 50.0%
! TCCTTTGCCTCTCATCGGTT+TGG + chr1.2:7540372-7540391 None:intergenic 50.0%
! TTTTCGAACACCGTCTCAGG+AGG - chr1.2:7539120-7539139 MS.gene016115:intron 50.0%
!! AAGCAAGGGACTGGTTGTAG+TGG - chr1.2:7538781-7538800 MS.gene016115:intron 50.0%
!! ATGCGGGAGGCTTTGTTATG+TGG - chr1.2:7540398-7540417 MS.gene016115:intron 50.0%
!! CTTGCTGTTTCTCGCGCATT+TGG - chr1.2:7540533-7540552 MS.gene016115:intron 50.0%
!! TGCGGGAGGCTTTGTTATGT+GGG - chr1.2:7540399-7540418 MS.gene016115:intron 50.0%
!!! GGCGAAGTTGTTGGCCTTTT+TGG - chr1.2:7538682-7538701 MS.gene016115:CDS 50.0%
ACAGGAACTTGGAGAGTCGG+TGG - chr1.2:7540506-7540525 MS.gene016115:intron 55.0%
CACAATGGCTGCAGCATCTG+CGG - chr1.2:7537218-7537237 MS.gene016115:intron 55.0%
CGGGAAACGGCAATGGCTAA+AGG + chr1.2:7540334-7540353 None:intergenic 55.0%
GCGATGACATTCCCCCTTGT+CGG - chr1.2:7539469-7539488 MS.gene016115:intron 55.0%
GTGATCTCGGGAAACGGCAA+TGG + chr1.2:7540341-7540360 None:intergenic 55.0%
TGCATGTGGTTGCGTTGTCG+AGG - chr1.2:7537943-7537962 MS.gene016115:intron 55.0%
!! ACTGGCTAGTGACGGACTGT+GGG - chr1.2:7540767-7540786 MS.gene016115:intron 55.0%
!! GGAGGCTTTGTTATGTGGGC+TGG - chr1.2:7540403-7540422 MS.gene016115:intron 55.0%
!! GGAGGTACTAAGCAAGGGAC+TGG - chr1.2:7538772-7538791 MS.gene016115:intron 55.0%
!! GGCGTTGATGGCGAAGTTGT+TGG - chr1.2:7538673-7538692 MS.gene016115:CDS 55.0%
!! TACTGGCTAGTGACGGACTG+TGG - chr1.2:7540766-7540785 MS.gene016115:intron 55.0%
!! TGCCTCTCATCGGTTTGGTC+TGG + chr1.2:7540367-7540386 None:intergenic 55.0%
CGCAGATGCTGCAGCCATTG+TGG + chr1.2:7537220-7537239 None:intergenic 60.0%
CTGAGCCCTCCACCACTAAC+AGG + chr1.2:7537005-7537024 None:intergenic 60.0%
! CTGTTAGTGGTGGAGGGCTC+AGG - chr1.2:7537003-7537022 MS.gene016115:CDS 60.0%
ATTCCCCCTTGTCGGCGCCA+TGG - chr1.2:7539477-7539496 MS.gene016115:intron 65.0%
CATCTGCGGTTGCGCTGTCG+AGG - chr1.2:7537232-7537251 MS.gene016115:intron 65.0%
TGTGGCCTATGGCACCACCG+CGG - chr1.2:7539403-7539422 MS.gene016115:intron 65.0%
! TGTGAAGGCATGCTCCGCGG+TGG + chr1.2:7539420-7539439 None:intergenic 65.0%
!! ATGCTCCGCGGTGGTGCCAT+AGG + chr1.2:7539411-7539430 None:intergenic 65.0%
!! TGTGGCCATGGCGCCGACAA+GGG + chr1.2:7539485-7539504 None:intergenic 65.0%
!! TTGTGGCCATGGCGCCGACA+AGG + chr1.2:7539486-7539505 None:intergenic 65.0%
!! GTGGCCATGGCGCCGACAAG+GGG + chr1.2:7539484-7539503 None:intergenic 70.0%
!! TGGCCATGGCGCCGACAAGG+GGG + chr1.2:7539483-7539502 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 7536942 7541659 7536942 ID=MS.gene016115
chr1.2 mRNA 7536942 7541659 7536942 ID=MS.gene016115.t1;Parent=MS.gene016115
chr1.2 exon 7541577 7541659 7541577 ID=MS.gene016115.t1.exon1;Parent=MS.gene016115.t1
chr1.2 CDS 7541577 7541659 7541577 ID=cds.MS.gene016115.t1;Parent=MS.gene016115.t1
chr1.2 exon 7539886 7540013 7539886 ID=MS.gene016115.t1.exon2;Parent=MS.gene016115.t1
chr1.2 CDS 7539886 7540013 7539886 ID=cds.MS.gene016115.t1;Parent=MS.gene016115.t1
chr1.2 exon 7538892 7538990 7538892 ID=MS.gene016115.t1.exon3;Parent=MS.gene016115.t1
chr1.2 CDS 7538892 7538990 7538892 ID=cds.MS.gene016115.t1;Parent=MS.gene016115.t1
chr1.2 exon 7538625 7538783 7538625 ID=MS.gene016115.t1.exon4;Parent=MS.gene016115.t1
chr1.2 CDS 7538625 7538783 7538625 ID=cds.MS.gene016115.t1;Parent=MS.gene016115.t1
chr1.2 exon 7538177 7538263 7538177 ID=MS.gene016115.t1.exon5;Parent=MS.gene016115.t1
chr1.2 CDS 7538177 7538263 7538177 ID=cds.MS.gene016115.t1;Parent=MS.gene016115.t1
chr1.2 exon 7538000 7538091 7538000 ID=MS.gene016115.t1.exon6;Parent=MS.gene016115.t1
chr1.2 CDS 7538000 7538091 7538000 ID=cds.MS.gene016115.t1;Parent=MS.gene016115.t1
chr1.2 exon 7537795 7537869 7537795 ID=MS.gene016115.t1.exon7;Parent=MS.gene016115.t1
chr1.2 CDS 7537795 7537869 7537795 ID=cds.MS.gene016115.t1;Parent=MS.gene016115.t1
chr1.2 exon 7536942 7537103 7536942 ID=MS.gene016115.t1.exon8;Parent=MS.gene016115.t1
chr1.2 CDS 7536942 7537103 7536942 ID=cds.MS.gene016115.t1;Parent=MS.gene016115.t1
Gene Sequence

>MS.gene016115

ATGGGCTATCTCAATTCTGTTTTATCACCTTCAAGTCAGGTTCATGCTGCTGATGATACACCTGTTAGTGGTGGAGGGCTCAGGTTTGTTAATGTTCTTAATTTCTGTCTAGATCTATAAATTTTATGAAATTGTTTTGTTTTATCATTTTTGTTTAATGGTTTTTGTTTAAGGTTTTAAATTGATGTTGCGGTTGTATGTTGTACGAGGTTTGATCCTGAGAATAACCATGGTTTGTTTAAGGTTTTAAAAACTCAGAAGCCTCTGCAACACAACCACAATGGCTGCAGCATCTGCGGTTGCGCTGTCGAGGCTTCTGAAAACCTTTATATTGTGACTGCAGTTGTAGTTGCAAACGGAAATTTAAAACCATGGTTATTCTTAGGATTTTAAATTGGCGTTGCGGTTGCATGTTGTGTTACTTTTCGGCTTTGTTTGGTAAAAAATAGTGGGTAGCTGATAAGCTAGCTTACATAGAATGGTTTTTCTTAAGGTTTTAAATTGATATTGCGGTTTTAGGTTGTCTTGTCTTTTGTGGTTGTTTGGTGATTCTTGATATTGTGAAAATTGTCTTGATGTTGTGGGAAATTGAGGATAGATGCGGCTGCAATTGTGGTTGTGTTGTTGAGGCTTCTAAAAACATTTATATTTTAATAACAATTGTAGTTGCTGACAGCAATTAAAAACCATGGTTATTCTCAAGGTTTTAAATTGTTGTTGCGATGCGGGTGCCTGTTTGTTGCCTTCTGTGTTGTGGTTACGTTTCGGTGTTTGATATCGTGAAAAATTATCTTGATGTGGGGCTGCAATTGTGTCGCGTTGTCGTGACTTCTGAAAACCTTTATATTGCGACTACAATTGTAGTTGCAGACGGCAATTTAAAACCATGATTATTCTCAAGGTTTTAAATTGTTGTTTCGATGCGGGTGCCTGTTTGTTGCCTTTTATGTTGTGGTTATGTTGTGATTTTGATATTATGGAAACTTATCTTGATATGCTGCTGCATGTGGTTGCGTTGTCGAGGCTTCTGAAAACCTTTATATTGTTGCAGTAATTGTGGTTGCAGATGGCAATTTAAAACCATTGTTATTCTCGGGGTTTTAAGTTGCTGTTGTGGTTGCCTGTTTGTTGCCTTTTGTGTTGTGGTTACGTTGCGATTTTGATATGGTGAATGTTAACTTGATATGCGGTTGCAATTGTGGGTGTGATATGGTTTCGGCGGCTTCCAAAGCCTTTATATTCCGGCTACAATTGCAGTTGCAGACGGCATTTTAATACCATGGTTATAGGTATTGTTGTTGGTTAATGTCATTCATACTTGGAAGGTTTTATATTGAAAATTTTCATGTTAAATTTGTCTCTAGTTTTCTATTGCTCTGCAGATTCGCAACTTGGTTTTATGTGGTTATTGTCTTTGTATTTTTCTGATCATGGTTCAAGACGAATGTTTATTGGACTTTTTGAGTTTTTTTTTTACTATTTCTTGGTTGATATTATTGTTGTGTTGTTCAATCTATGTTTTGTTGAATGTCTTTAGTCCTATTCTGGCTTTTTTATTTACTAGGCTTCCTTTAATTTTTCCGACTTTAGGTCAATTCAATGAGATTTTTTTTTACATACTTTGTTGTTTTGATATGTATCTACAGCCAGAATGGAAAATTCAGCTATGGATATGCTAGCTCCCCTGGCAAGAGATCTTCAATGGAAGATTTTTATGAGACAAGAATTGACGGCGTTGATGGCGAAGTTGTTGGCCTTTTTGGAGTTTTTGATGGTATATTTACATGATTCTTCTATCTCCATTTCTTTCTATCCATGCTACTTATTTTTGGAGGTACTAAGCAAGGGACTGGTTGTAGTGGAAACATTGATCGGACACGTGATGGACTGTCGACCCATAGAGAACTAATAAGATGTTTTACTTATATTTTTTTTTCCTTAATTTGTTTCTGTCGGTGGATTTTCCTTTTGAAGTTATTGGGAAATGGGAAATTAATTGTTCCATGTGACTTAGTGTTTCCTTATGCAATGCTTCTAGGCTTTTTTGCTTTTATTTTCTCAAATGCACATGCACGCACACATAAAGAGGAAAGTTTGGATCTGTTTACAGTTATTGTCTCATAAAGTATAAATCTGGTTTTGGTTGTTTTGATTATTCTGATCGGACACAGTACTCTTTTTTCGAACACCGTCTCAGGAGGTTTTTCTTCTAAGTGATCTGTCTTTGAGAATAATTTCGAGAGGCATCACCATTGTCTTATACTTTCTGTTGCCTGTAATTATTTAATTTTTTTTTTATGAAGAGCCTTCAATTCATTAATAGCAAGTTTTTGGTGCATGTTTTTCTTTATATGGACTTCGAAAATAATTCTTTTGTAGCATTTAATCCTTTAAGAAGTATTGGCTCTTGACCAGTGTTGTCGATGAAGGAAGGCCAAAATCTGCCCTATAAACACGTCATTGTGGCCTATGGCACCACCGCGGAGCATGCCTTCACAAATTGCCTATGGTGGGGGTAAATAAATCTGCGATGACATTCCCCCTTGTCGGCGCCATGGCCACAATTTAAATACACTGCTCTTGACTAGTATTTATGACCTATGCTTGATACTATAATATACCTATTATAAATGAAGGTTAGCTACAACTTTCTTGTTTAAAACTTTCAGGTCATGGTGGTGCTCGTGCTGCTGAGTATGTCAAGCAAAACCTATTTAGTAATTTGATCAGCCACCCGAAATTCATTTCTGACACCAAATCTGCAATAGGTCTGTAGTTTCTTACCTATCACAGTTTGATCCTTTAAACTGATTTTCTTCAATTCGCTAAATATGAAGAATAATACTGCTCCTGCCATTTGTATTTTTTTTACACAGCTGATGCATATACGCATACCGACTCTGAATTTCTGAAATCAGAGAATAATCAAAACAGAGATGCTGGATCAACTGCTTCCACTGCCATTCTTGTTGGTGACCGTTTGCTTGTTGCAAATGTTGGGGACTCCAGAGCTGTTATATGCAGGGGTGGAAATGGTAAGGCTAGTAGCTGCATAATCGTTATGGTTGTCAAATGGAATTTGATTTTCTAAAACTTGAGGAAATCATAATCGTTATGGTTGTCAAATGGTTCTGGAAGTTTCTATATGATGTATTTTTAGCCCTATGCTTTTCTTTCTAAATGAACGTTGAAAGACTATTTTTCGTATCACTTGTGGATGAAATATAAAGGGTGTTAATTCAGTTTTAATTGTTTGATTAGATTGTCAAGGTGTATGTGTTACTACATTTGAATTTGGTCTCTTGCGTATCCGTTGAGAATTGAGAAAAACATTTCAACTTTTCGATTTCAAGAATTGGTAAAATATTATGATTTACTATTTTTTTTTTCCTTTAGCCATTGCCGTTTCCCGAGATCACAAACCAGACCAAACCGATGAGAGGCAAAGGATAGAAGATGCGGGAGGCTTTGTTATGTGGGCTGGTAAAGTCATCTTATTGTTAGCTCTTGGGATTTGATTTATATTTTTTTTCTATCTCTATGGAGTACTTAAAACCATACTTTACAGGAACTTGGAGAGTCGGTGGTGTTCTTGCTGTTTCTCGCGCATTTGGTGATAGACTCCTTAAGCAATACGTTGTTGCTGATCCGGAAATTCAGGTGTGTTTCTAATATGGAGACAGACTGACATCCATTCTTTGATATTTCATCTCTTCGATTCATCTTAAGAGAGAAAATTATGTTTCATATGAGAAAATGAAAATTAACCTACATATTTATGGTCTTGCAGGAAGAAAAGGTCGATAGTTCTCTTGAGTTTCTTATACTGGCTAGTGACGGACTGTGGGATGTTGTCTCAAATGAGGTTTGCTATCATTTTCACTTCCTTTGTTTTTTTTCCTTTCCTTTTTCTTTTTCCGATAAATATAGTGCATTTTCGTAACCACAAGAGATATAAATGAATTGATTTGTATCAAGATTATTTGGTAAAGTTAATGCATTTGTTCTGTTTTAAATAGAGTTATAGCCTAGCATTTTTGTAAAATATTAGCGAACAAATTTAAAAGGGTTCTCTTAAAGCCTCTTAAAAAAAGGGTTCTCTTAAACCAAATAGACCTTCGCCTTTACTTTCCTTATGTAGATTAAAGGAGCGAAATGCGAGAAACTGATAGAGCAAGACCCCATTTACTTTGTAACATTTTAAATTTTTATTTTGTATGTGGGTGGCTGAAATGGCAATTGTTATGGAATATGAAAGCTAACTAGAGAGACTGCATTTCCGGAAACACTGAAAGCAATGTTTTGAAAAGAAAAAAATTAACAATTTTTAAAAATATCCAATATGTTTTTAAATTACATTTTCAAAAACTTCCATAACGTCTTCTCTAATTTTTATTTTATCCATGGAATGGAAACAAAAAATATCGGAAATAAACAGGCTCTAAAAATCGAACCAACGAGTCATTTCTGATTGATGAGTTGTAAAATTGATAATCCAAACCCTGCCCTAATGTCTTATCCAACTCTAACTCAAACTTTTTTCTACTTTTCTTCAGGAAGCTGTTGCTATGATTAAACCAATTGAGGATGCAGAAGAAGCAGCAAAGAGGCTGATGAAAGAAGCGTATCAGAGAGGTAGTTCTGACAACATTACTTGTGTCGTCGTTCGTTTCCTGATGAACAATCAAGGTTCTTCGTCTCGTAATAGCTCTGGCTAA
Protein sequence

>MS.gene016115.t1

MGYLNSVLSPSSQVHAADDTPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVDGEVVGLFGVFDGHGGARAAEYVKQNLFSNLISHPKFISDTKSAIADAYTHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVAMIKPIEDAEEAAKRLMKEAYQRGSSDNITCVVVRFLMNNQGSSSRNSSG