AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene016748

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene016748.t1 MTR_5g085580 98.043 460 8 1 1 460 1 459 0.0 921
MS.gene016748.t1 MTR_1g056640 63.029 449 156 4 22 460 35 483 0.0 578
MS.gene016748.t1 MTR_3g080410 72.989 348 94 0 13 360 14 361 0.0 528
MS.gene016748.t1 MTR_1g031900 41.957 460 238 4 10 464 7 442 9.42e-122 365
MS.gene016748.t1 MTR_1g031900 41.957 460 238 4 10 464 7 442 1.05e-121 365
MS.gene016748.t1 MTR_6g088885 39.316 468 261 4 12 478 14 459 3.06e-119 359
MS.gene016748.t1 MTR_3g065460 40.938 469 247 5 1 466 3 444 6.08e-119 357
MS.gene016748.t1 MTR_4g132280 41.535 443 232 4 25 464 45 463 2.99e-118 357
MS.gene016748.t1 MTR_8g012400 39.394 462 256 7 10 464 11 455 1.24e-116 351
MS.gene016748.t1 MTR_7g053500 40.363 441 243 6 26 461 27 452 1.31e-114 345
MS.gene016748.t1 MTR_4g069940 41.324 438 243 4 25 461 29 453 4.49e-114 344
MS.gene016748.t1 MTR_4g088155 38.976 449 250 6 24 464 22 454 3.51e-112 339
MS.gene016748.t1 MTR_5g078200 38.380 469 258 4 1 466 3 443 6.10e-111 342
MS.gene016748.t1 MTR_4g083500 41.741 448 246 10 24 464 43 482 8.17e-109 333
MS.gene016748.t1 MTR_3g116510 39.520 458 256 6 8 461 8 448 2.62e-108 329
MS.gene016748.t1 MTR_8g085720 38.375 443 247 4 25 464 26 445 2.99e-107 328
MS.gene016748.t1 MTR_5g078200 39.401 434 236 3 36 466 1 410 1.78e-106 329
MS.gene016748.t1 MTR_8g102340 38.745 462 212 6 25 479 28 425 2.44e-105 322
MS.gene016748.t1 MTR_3g083580 36.129 465 265 6 8 466 7 445 3.61e-105 322
MS.gene016748.t1 MTR_4g084480 48.538 342 167 4 11 345 12 351 1.96e-103 314
MS.gene016748.t1 MTR_4g084480 48.538 342 167 4 11 345 5 344 2.08e-103 314
MS.gene016748.t1 MTR_4g084480 48.538 342 167 4 11 345 12 351 3.13e-103 314
MS.gene016748.t1 MTR_1g077990 50.926 324 155 4 20 342 26 346 2.47e-102 312
MS.gene016748.t1 MTR_7g026340 40.402 448 244 9 17 461 15 442 5.71e-102 313
MS.gene016748.t1 MTR_1g022160 37.333 450 270 6 25 464 24 471 5.71e-100 308
MS.gene016748.t1 MTR_1g022160 36.147 462 263 7 25 466 24 473 5.77e-100 308
MS.gene016748.t1 MTR_1g022160 36.996 446 269 6 25 460 24 467 3.06e-98 304
MS.gene016748.t1 MTR_7g053500 40.360 389 212 6 78 461 2 375 4.93e-98 300
MS.gene016748.t1 MTR_4g010200 44.798 346 185 4 5 345 9 353 8.87e-98 300
MS.gene016748.t1 MTR_8g012400 39.948 388 212 6 78 461 2 372 5.91e-97 297
MS.gene016748.t1 MTR_4g052970 46.483 327 168 4 21 344 25 347 1.07e-95 294
MS.gene016748.t1 MTR_2g019345 47.321 336 172 5 9 342 7 339 3.10e-95 293
MS.gene016748.t1 MTR_2g086530 43.895 344 185 4 5 344 6 345 1.32e-93 289
MS.gene016748.t1 MTR_2g086530 44.720 322 173 3 24 344 7 324 5.60e-92 284
MS.gene016748.t1 MTR_4g114850 45.794 321 172 2 23 342 24 343 4.21e-89 276
MS.gene016748.t1 MTR_4g114850 45.794 321 172 2 23 342 24 343 6.54e-89 276
MS.gene016748.t1 MTR_4g114850 45.794 321 172 2 23 342 24 343 1.10e-88 276
MS.gene016748.t1 MTR_1g007810 43.182 352 187 7 7 353 1 344 1.65e-87 272
MS.gene016748.t1 MTR_3g116510 42.296 331 174 4 131 461 1 314 3.87e-84 262
MS.gene016748.t1 MTR_1g022160 39.385 325 194 3 25 347 24 347 1.01e-81 259
MS.gene016748.t1 MTR_4g076570 42.056 321 179 4 22 342 19 332 2.28e-78 249
MS.gene016748.t1 MTR_4g076470 40.476 336 180 9 10 340 4 324 3.59e-77 244
MS.gene016748.t1 MTR_1g052430 43.614 321 168 7 25 342 32 342 1.84e-76 245
MS.gene016748.t1 MTR_2g034480 42.604 338 179 9 7 340 9 335 6.91e-76 242
MS.gene016748.t1 MTR_4g076490 41.693 319 171 7 25 342 97 401 1.14e-75 244
MS.gene016748.t1 MTR_4g076255 41.159 328 179 7 15 342 15 328 8.36e-75 238
MS.gene016748.t1 MTR_4g076440 41.284 327 176 8 17 342 15 326 1.11e-74 238
MS.gene016748.t1 MTR_4g076430 41.159 345 181 11 1 342 1 326 2.70e-74 237
MS.gene016748.t1 MTR_4g076500 39.936 313 179 3 22 334 75 378 8.85e-73 235
MS.gene016748.t1 MTR_7g081350 37.313 335 201 6 6 340 8 333 6.49e-70 226
MS.gene016748.t1 MTR_2g034470 39.264 326 186 8 17 340 23 338 1.98e-68 223
MS.gene016748.t1 MTR_2g027560 34.521 449 250 15 25 461 28 444 3.50e-66 221
MS.gene016748.t1 MTR_2g034470 38.907 311 179 7 32 340 2 303 2.93e-65 214
MS.gene016748.t1 MTR_2g034440 38.272 324 188 8 17 338 15 328 5.38e-64 211
MS.gene016748.t1 MTR_4g112025 32.489 474 276 20 2 462 9 451 1.28e-63 215
MS.gene016748.t1 MTR_7g081370 36.527 334 190 7 7 340 10 321 5.10e-63 207
MS.gene016748.t1 MTR_1g053320 33.191 467 269 18 10 463 16 452 1.19e-62 211
MS.gene016748.t1 MTR_1g010120 32.720 489 280 20 5 479 6 459 1.14e-61 209
MS.gene016748.t1 MTR_4g124440 30.426 470 285 14 5 461 3 443 4.21e-58 199
MS.gene016748.t1 MTR_3g031770 32.280 443 264 12 25 461 27 439 1.19e-57 198
MS.gene016748.t1 MTR_8g092070 30.126 478 286 18 4 461 2 451 4.02e-57 199
MS.gene016748.t1 MTR_3g095050 33.114 456 256 22 25 466 34 454 1.86e-55 192
MS.gene016748.t1 MTR_3g108600 30.835 467 266 15 5 461 10 429 5.84e-55 191
MS.gene016748.t1 MTR_7g085390 31.681 464 266 20 25 474 26 452 2.90e-54 189
MS.gene016748.t1 MTR_6g032820 31.681 464 272 18 3 451 4 437 5.54e-54 187
MS.gene016748.t1 MTR_4g134280 32.778 360 199 14 113 461 3 330 9.85e-44 158
MS.gene016748.t1 MTR_5g081720 32.566 304 195 6 41 341 53 349 2.37e-43 157
MS.gene016748.t1 MTR_5g015720 46.218 119 55 4 358 474 305 416 1.37e-25 108
MS.gene016748.t1 MTR_8g085390 56.471 85 36 1 382 466 29 112 2.45e-24 100
MS.gene016748.t1 MTR_3g082080 52.941 85 39 1 383 467 157 240 2.68e-24 101
MS.gene016748.t1 MTR_8g089400 53.659 82 38 0 380 461 34 115 7.61e-24 97.8
MS.gene016748.t1 MTR_3g048280 48.485 99 49 2 378 476 107 203 9.33e-24 99.4
MS.gene016748.t1 MTR_8g089400 53.659 82 38 0 380 461 54 135 2.08e-23 97.4
MS.gene016748.t1 MTR_5g097420 51.807 83 40 0 383 465 30 112 9.05e-23 93.6
MS.gene016748.t1 MTR_1g084820 55.294 85 36 2 377 461 414 496 8.66e-21 95.9
MS.gene016748.t1 MTR_1g084820 55.294 85 36 2 377 461 414 496 1.08e-20 95.9
MS.gene016748.t1 MTR_7g111600 39.568 139 77 2 334 466 105 242 2.84e-20 90.5
MS.gene016748.t1 MTR_7g111600 39.568 139 77 2 334 466 105 242 3.11e-20 91.7
MS.gene016748.t1 MTR_5g091650 47.619 84 43 1 378 461 103 185 3.92e-20 88.6
MS.gene016748.t1 MTR_7g111600 39.568 139 77 2 334 466 105 242 4.52e-20 90.9
MS.gene016748.t1 MTR_8g085400 52.381 84 36 2 382 465 32 111 7.60e-20 85.5
MS.gene016748.t1 MTR_5g091650 47.619 84 43 1 378 461 103 185 9.01e-20 89.4
MS.gene016748.t1 MTR_4g133730 46.341 82 44 0 383 464 28 109 1.10e-19 84.7
MS.gene016748.t1 MTR_4g133735 46.341 82 44 0 383 464 28 109 3.55e-19 83.6
MS.gene016748.t1 MTR_4g109490 53.165 79 35 2 383 461 24 100 4.85e-19 86.3
MS.gene016748.t1 MTR_2g049670 51.724 87 39 3 383 469 158 241 1.57e-18 87.0
MS.gene016748.t1 MTR_8g085440 46.250 80 42 1 382 461 31 109 5.45e-18 80.1
MS.gene016748.t1 MTR_4g036775 35.507 138 84 2 205 342 43 175 6.55e-18 82.8
MS.gene016748.t1 MTR_4g036775 39.535 86 48 1 8 89 1 86 4.16e-12 66.2
MS.gene016748.t1 MTR_4g079530 43.137 102 52 1 360 461 20 115 6.56e-18 80.1
MS.gene016748.t1 MTR_1g116870 46.835 79 41 1 383 461 276 353 8.26e-18 85.1
MS.gene016748.t1 MTR_4g079530 43.137 102 52 1 360 461 20 115 1.14e-17 81.3
MS.gene016748.t1 MTR_8g085420 45.000 80 43 1 382 461 31 109 2.89e-17 79.0
MS.gene016748.t1 MTR_4g036680 40.385 104 57 2 239 342 77 175 3.35e-17 80.9
MS.gene016748.t1 MTR_4g036680 43.056 72 41 0 18 89 15 86 3.74e-11 63.2
MS.gene016748.t1 MTR_8g088120 54.286 70 31 1 392 461 57 125 4.77e-17 80.5
MS.gene016748.t1 MTR_4g083070 41.758 91 49 2 377 464 12 101 1.35e-14 72.8
MS.gene016748.t1 MTR_5g044530 45.946 74 39 1 378 451 17 89 2.20e-14 73.6
MS.gene016748.t1 MTR_2g072500 38.750 80 47 1 382 461 7 84 2.28e-13 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene016748.t1 AT2G05790 71.332 443 122 2 21 460 21 461 0.0 661
MS.gene016748.t1 AT4G26830 62.009 458 157 4 3 460 4 444 0.0 561
MS.gene016748.t1 AT4G26830 63.265 441 146 3 20 460 24 448 0.0 559
MS.gene016748.t1 AT5G55180 61.765 442 156 2 21 462 23 451 0.0 558
MS.gene016748.t1 AT5G55180 61.591 440 156 2 21 460 23 449 0.0 553
MS.gene016748.t1 AT2G01630 41.591 440 230 3 25 461 23 438 5.40e-120 358
MS.gene016748.t1 AT2G01630 41.124 445 235 3 25 466 23 443 2.10e-119 359
MS.gene016748.t1 AT1G11820 40.363 441 236 4 25 462 44 460 2.80e-119 358
MS.gene016748.t1 AT1G11820 40.225 445 239 4 25 466 44 464 1.30e-118 357
MS.gene016748.t1 AT5G56590 40.583 446 246 4 23 466 24 452 2.85e-117 354
MS.gene016748.t1 AT4G29360 41.064 470 254 4 7 461 8 469 4.87e-116 352
MS.gene016748.t1 AT4G29360 40.292 479 257 4 4 461 9 479 6.23e-115 349
MS.gene016748.t1 AT1G66250 40.402 448 238 5 25 469 32 453 3.29e-114 346
MS.gene016748.t1 AT2G16230 39.729 443 247 4 25 466 25 448 5.97e-113 343
MS.gene016748.t1 AT5G24318 39.224 464 255 9 4 461 7 449 2.50e-111 337
MS.gene016748.t1 AT5G24318 39.224 464 255 9 4 461 7 449 5.45e-111 336
MS.gene016748.t1 AT3G07320 40.899 445 241 7 22 461 22 449 1.52e-110 335
MS.gene016748.t1 AT3G23770 39.073 453 252 6 15 460 29 464 2.87e-109 332
MS.gene016748.t1 AT4G34480 39.785 465 254 7 5 466 5 446 9.79e-109 332
MS.gene016748.t1 AT4G14080 38.600 443 253 5 22 460 39 466 3.44e-107 327
MS.gene016748.t1 AT3G13560 37.111 450 255 5 15 461 16 440 1.94e-104 321
MS.gene016748.t1 AT3G13560 37.111 450 255 5 15 461 16 440 1.94e-104 321
MS.gene016748.t1 AT3G13560 37.111 450 255 5 15 461 16 440 1.94e-104 321
MS.gene016748.t1 AT3G13560 37.111 450 255 5 15 461 16 440 1.94e-104 321
MS.gene016748.t1 AT3G13560 37.111 450 255 5 15 461 16 440 1.94e-104 321
MS.gene016748.t1 AT1G30080 48.961 337 169 3 7 342 18 352 5.57e-102 310
MS.gene016748.t1 AT1G30080 48.961 337 169 3 7 342 18 352 8.56e-102 311
MS.gene016748.t1 AT2G01630 41.176 391 203 3 25 412 23 389 9.13e-99 302
MS.gene016748.t1 AT3G55430 39.121 455 243 14 12 461 18 443 3.96e-97 300
MS.gene016748.t1 AT4G18340 45.906 342 178 4 6 342 11 350 5.56e-97 298
MS.gene016748.t1 AT4G18340 45.906 342 178 4 6 342 11 350 1.17e-96 297
MS.gene016748.t1 AT2G27500 47.335 319 166 2 25 342 29 346 9.15e-96 294
MS.gene016748.t1 AT5G42100 49.226 323 158 5 24 342 26 346 2.19e-95 295
MS.gene016748.t1 AT2G27500 47.335 319 166 2 25 342 29 346 3.20e-95 293
MS.gene016748.t1 AT5G42100 49.226 323 158 5 24 342 26 346 3.86e-95 294
MS.gene016748.t1 AT1G32860 45.342 322 171 4 24 342 28 347 3.24e-94 292
MS.gene016748.t1 AT3G15800 46.769 325 170 3 23 345 41 364 1.14e-93 290
MS.gene016748.t1 AT2G26600 44.860 321 175 2 23 342 32 351 2.80e-89 278
MS.gene016748.t1 AT5G42720 44.282 341 182 6 25 361 26 362 5.78e-88 276
MS.gene016748.t1 AT5G24318 41.691 343 191 5 4 342 7 344 2.53e-87 272
MS.gene016748.t1 AT1G11820 40.752 319 185 3 25 340 44 361 8.58e-86 269
MS.gene016748.t1 AT4G34480 42.274 343 193 4 5 344 5 345 3.54e-85 266
MS.gene016748.t1 AT4G34480 42.697 356 179 6 113 466 3 335 2.78e-84 265
MS.gene016748.t1 AT5G24318 40.000 330 176 5 134 461 1 310 4.03e-83 259
MS.gene016748.t1 AT2G39640 35.281 462 263 14 5 464 12 439 1.79e-81 263
MS.gene016748.t1 AT2G39640 35.870 92 57 2 375 466 453 542 2.98e-13 72.4
MS.gene016748.t1 AT4G16260 39.316 351 201 9 1 351 1 339 1.35e-75 241
MS.gene016748.t1 AT2G27500 45.896 268 143 2 76 342 2 268 1.63e-74 237
MS.gene016748.t1 AT3G46570 42.604 338 181 10 11 342 12 342 1.98e-72 233
MS.gene016748.t1 AT3G57270 40.062 322 184 6 22 342 24 337 8.59e-72 231
MS.gene016748.t1 AT5G20390 41.176 323 179 8 22 342 30 343 6.53e-71 229
MS.gene016748.t1 AT4G16260 40.000 320 181 8 32 351 2 310 2.52e-70 226
MS.gene016748.t1 AT3G61810 38.390 323 186 4 25 342 55 369 4.98e-68 223
MS.gene016748.t1 AT3G24330 32.489 474 279 16 2 463 16 460 1.07e-67 225
MS.gene016748.t1 AT2G26600 43.426 251 140 2 93 342 8 257 8.26e-67 216
MS.gene016748.t1 AT3G57260 39.053 338 191 8 7 342 12 336 1.50e-65 215
MS.gene016748.t1 AT3G57260 39.053 338 191 8 7 342 28 352 3.10e-65 214
MS.gene016748.t1 AT5G20340 40.841 333 177 10 17 342 34 353 9.50e-64 211
MS.gene016748.t1 AT1G77780 37.941 340 197 9 7 342 3 332 1.33e-63 211
MS.gene016748.t1 AT4G17180 33.978 465 258 17 7 461 9 434 2.07e-63 213
MS.gene016748.t1 AT5G20330 40.606 330 177 9 19 342 28 344 9.84e-63 207
MS.gene016748.t1 AT1G64760 31.818 484 267 18 1 462 1 443 9.46e-60 204
MS.gene016748.t1 AT1G64760 31.818 484 267 18 1 462 1 443 9.46e-60 204
MS.gene016748.t1 AT3G57240 37.771 323 187 8 20 342 30 338 1.23e-59 199
MS.gene016748.t1 AT5G18220 31.064 470 277 16 10 463 13 451 2.83e-59 202
MS.gene016748.t1 AT4G31140 32.285 477 273 19 4 464 3 445 6.22e-59 202
MS.gene016748.t1 AT1G77790 38.053 339 196 9 7 342 14 341 7.35e-59 197
MS.gene016748.t1 AT1G33220 38.323 334 184 8 4 327 8 329 1.12e-58 197
MS.gene016748.t1 AT2G19440 31.423 471 274 19 7 462 3 439 7.03e-55 191
MS.gene016748.t1 AT2G19440 31.423 471 274 19 7 462 3 439 7.03e-55 191
MS.gene016748.t1 AT3G04010 29.724 471 281 18 9 462 15 452 9.58e-54 188
MS.gene016748.t1 AT5G58480 32.287 446 262 13 25 462 26 439 1.66e-53 187
MS.gene016748.t1 AT5G64790 30.719 459 273 19 9 455 14 439 6.64e-52 183
MS.gene016748.t1 AT5G58090 31.140 456 263 17 22 461 19 439 8.91e-52 182
MS.gene016748.t1 AT5G20870 31.250 480 277 19 5 464 10 456 3.75e-50 179
MS.gene016748.t1 AT5G20560 31.548 336 217 8 4 334 9 336 4.11e-46 164
MS.gene016748.t1 AT3G55780 31.169 308 203 6 38 341 48 350 1.08e-45 164
MS.gene016748.t1 AT5G67460 28.533 375 195 12 93 462 66 372 1.64e-32 127
MS.gene016748.t1 AT5G67460 28.125 384 197 13 93 471 66 375 2.56e-32 127
MS.gene016748.t1 AT4G05430 48.387 93 48 0 370 462 35 127 8.37e-25 99.8
MS.gene016748.t1 AT5G35740 54.217 83 37 1 383 464 30 112 2.32e-24 98.2
MS.gene016748.t1 AT1G79480 58.228 79 32 1 383 461 310 387 3.37e-23 101
MS.gene016748.t1 AT1G79480 58.228 79 32 1 383 461 311 388 3.37e-23 101
MS.gene016748.t1 AT4G05430 51.220 82 40 0 380 461 20 101 4.96e-23 95.1
MS.gene016748.t1 AT4G05430 51.220 82 40 0 380 461 45 126 7.95e-23 95.5
MS.gene016748.t1 AT1G29380 56.098 82 35 1 383 464 148 228 1.08e-22 97.1
MS.gene016748.t1 AT1G29380 56.098 82 35 1 383 464 148 228 1.08e-22 97.1
MS.gene016748.t1 AT1G66870 48.864 88 45 0 379 466 22 109 1.36e-22 92.8
MS.gene016748.t1 AT1G66870 48.864 88 45 0 379 466 49 136 1.68e-22 93.6
MS.gene016748.t1 AT2G30933 56.250 80 34 1 382 461 81 159 2.02e-22 94.0
MS.gene016748.t1 AT2G30933 56.250 80 34 1 382 461 81 159 2.02e-22 94.0
MS.gene016748.t1 AT1G29380 55.422 83 36 1 383 465 148 229 2.83e-22 97.8
MS.gene016748.t1 AT1G29380 55.422 83 36 1 383 465 148 229 2.99e-22 96.3
MS.gene016748.t1 AT4G13600 55.952 84 36 1 383 466 61 143 3.72e-22 95.5
MS.gene016748.t1 AT2G30933 55.556 81 35 1 381 461 80 159 6.38e-22 94.7
MS.gene016748.t1 AT2G04910 48.889 90 45 1 374 463 7 95 1.13e-21 90.9
MS.gene016748.t1 AT5G63225 46.154 91 48 1 379 469 21 110 2.57e-21 89.4
MS.gene016748.t1 AT2G04910 47.826 92 47 1 374 465 7 97 6.36e-21 88.2
MS.gene016748.t1 AT1G09460 50.000 92 43 2 375 466 129 217 5.41e-19 88.2
MS.gene016748.t1 AT4G09462 45.783 83 44 1 379 461 25 106 7.06e-19 82.8
MS.gene016748.t1 AT4G09465 44.578 83 45 1 379 461 27 108 2.00e-18 81.3
MS.gene016748.t1 AT1G66852 46.988 83 43 1 379 461 22 103 2.40e-18 80.9
MS.gene016748.t1 AT4G09467 44.578 83 45 1 379 461 27 108 2.46e-18 81.3
MS.gene016748.t1 AT4G09464 44.578 83 45 1 379 461 27 108 2.46e-18 81.3
MS.gene016748.t1 AT5G53600 41.667 84 47 1 378 461 24 105 2.75e-18 80.9
MS.gene016748.t1 AT1G66855 42.683 82 47 0 380 461 23 104 3.58e-18 80.5
MS.gene016748.t1 AT4G16165 42.169 83 48 0 379 461 22 104 4.84e-18 80.1
MS.gene016748.t1 AT4G09466 44.578 83 45 1 379 461 27 108 5.44e-18 80.1
MS.gene016748.t1 AT5G63230 39.560 91 54 1 379 469 22 111 6.96e-18 79.7
MS.gene016748.t1 AT5G53610 44.578 83 44 1 379 461 24 104 1.38e-17 79.0
MS.gene016748.t1 AT1G18650 43.373 83 46 1 379 461 17 98 1.44e-17 79.3
MS.gene016748.t1 AT1G18650 44.444 81 44 1 381 461 19 98 1.75e-17 80.9
MS.gene016748.t1 AT5G63250 43.333 90 49 2 383 470 42 131 8.20e-17 77.4
MS.gene016748.t1 AT3G58100 42.500 80 46 0 383 462 41 120 2.61e-16 77.4
MS.gene016748.t1 AT2G29735 40.698 86 48 2 383 466 31 115 2.94e-16 75.5
MS.gene016748.t1 AT5G61130 42.500 80 45 1 382 461 20 98 5.98e-16 77.0
MS.gene016748.t1 AT3G58100 42.500 80 46 0 383 462 117 196 6.05e-16 78.2
MS.gene016748.t1 AT4G09090 46.053 76 39 2 383 457 31 105 1.26e-15 73.6
MS.gene016748.t1 AT2G43670 36.364 88 54 1 379 466 31 116 1.13e-14 70.9
MS.gene016748.t1 AT1G26450 50.000 66 32 1 390 455 27 91 2.42e-14 72.0
MS.gene016748.t1 AT5G63240 38.889 90 53 1 383 470 40 129 3.18e-14 69.7
MS.gene016748.t1 AT5G08000 42.353 85 48 1 377 461 34 117 6.24e-14 71.2
MS.gene016748.t1 AT1G78520 38.750 80 47 1 382 461 31 108 2.21e-13 67.0
MS.gene016748.t1 AT1G69295 48.571 70 35 1 395 464 32 100 2.30e-13 69.7
MS.gene016748.t1 AT1G13830 40.244 82 48 1 380 461 32 112 2.56e-13 69.3
MS.gene016748.t1 AT1G69295 48.571 70 35 1 395 464 28 96 3.72e-13 69.3
MS.gene016748.t1 AT5G08000 42.169 83 47 1 379 461 17 98 3.94e-13 68.6
MS.gene016748.t1 AT1G13830 40.506 79 46 1 383 461 21 98 4.86e-13 68.2
MS.gene016748.t1 AT2G42930 34.234 111 67 3 362 468 15 123 7.39e-13 66.2
MS.gene016748.t1 AT2G03505 36.250 80 50 1 382 461 20 98 1.57e-11 62.0
MS.gene016748.t1 AT2G03505 36.250 80 50 1 382 461 20 98 1.74e-11 63.2
MS.gene016748.t1 AT2G03505 36.250 80 50 1 382 461 20 98 1.74e-11 63.2
MS.gene016748.t1 AT2G03505 36.250 80 50 1 382 461 20 98 1.74e-11 63.2

Find 105 sgRNAs with CRISPR-Local

Find 142 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCGACAGTGAGTTTGATTT+TGG 0.204771 5.2:+72888116 None:intergenic
TAATCTTCATAATGATATTA+AGG 0.220512 5.2:-72887893 MS.gene016748:CDS
AACTCTTACCCTTCTTCTTC+CGG 0.243510 5.2:-72887838 MS.gene016748:CDS
CCCATTGCTCTTTCTGCTCT+TGG 0.246418 5.2:-72887862 MS.gene016748:CDS
GCTGGTGGAAGTTGCTATTT+TGG 0.265592 5.2:-72886998 MS.gene016748:CDS
TTCAACGCCTCCACGGTTAA+AGG 0.301335 5.2:+72887298 None:intergenic
GCATGTGCAACCAATGTATT+AGG 0.306046 5.2:+72887061 None:intergenic
GCACCGGCTTCACCGGTTTC+CGG 0.319724 5.2:-72887256 MS.gene016748:CDS
AACGTCGTCGTTTCGGAAAC+GGG 0.333129 5.2:-72887553 MS.gene016748:CDS
CGATATAAACGTCGTCGTTT+CGG 0.341454 5.2:-72887560 MS.gene016748:CDS
TTTGTTAGATTCTTGTAATA+AGG 0.344241 5.2:-72886909 MS.gene016748:CDS
AGGTATTTCGTCGAGTTGTT+TGG 0.344374 5.2:+72887958 None:intergenic
TTGTATACTTTCTTCTCATC+CGG 0.344579 5.2:+72887325 None:intergenic
TTGCTGCTGCAAAGAGTTGT+TGG 0.357391 5.2:+72888085 None:intergenic
AACAGCAATGGCTTCTATAA+TGG 0.358498 5.2:+72888002 None:intergenic
ACTCTTACCCTTCTTCTTCC+GGG 0.359608 5.2:-72887837 MS.gene016748:CDS
TGCAACACACCACGTGTTCC+CGG 0.361513 5.2:+72887189 None:intergenic
CGTAAGATCTTGACATCAAA+AGG 0.380025 5.2:-72887454 MS.gene016748:CDS
AAACGTCGTCGTTTCGGAAA+CGG 0.380698 5.2:-72887554 MS.gene016748:CDS
GTCAGGTGGATGCGGGTAAC+GGG 0.390822 5.2:-72887654 MS.gene016748:CDS
GTGATTATTGAATGCTTACT+AGG 0.391234 5.2:+72886947 None:intergenic
CCTACTTCAGAAAGAAACTT+TGG 0.391839 5.2:-72887358 MS.gene016748:CDS
GGTCAGGTGGATGCGGGTAA+CGG 0.402489 5.2:-72887655 MS.gene016748:CDS
CCAAAGTTTCTTTCTGAAGT+AGG 0.404695 5.2:+72887358 None:intergenic
GGCGGTGGCAGTGGTGGTGG+TGG 0.408096 5.2:-72887232 MS.gene016748:CDS
CAATAGTTATTATCAGAAAC+AGG 0.411086 5.2:-72887026 MS.gene016748:CDS
CTACTTCAGAAAGAAACTTT+GGG 0.413072 5.2:-72887357 MS.gene016748:CDS
CTGCCACCGCCACCGGAAAC+CGG 0.427535 5.2:+72887244 None:intergenic
GGTGGCAGTGGTGGTGGTGG+TGG 0.436286 5.2:-72887229 MS.gene016748:CDS
GAAACCGGTGAAGCCGGTGC+TGG 0.437071 5.2:+72887259 None:intergenic
GGTGGCGGTGGCAGTGGTGG+TGG 0.437921 5.2:-72887235 MS.gene016748:CDS
GTTTCCGGTGGCGGTGGCAG+TGG 0.442356 5.2:-72887241 MS.gene016748:CDS
AGCTCTGCTTTGGGCCTAAG+TGG 0.450851 5.2:+72887427 None:intergenic
GGGTTATACCTTGTGATTTG+AGG 0.454302 5.2:+72888190 None:intergenic
TCAGTTCTACGTGCATTATC+CGG 0.456312 5.2:-72888141 MS.gene016748:CDS
TCCGGTGGCGGTGGCAGTGG+TGG 0.458872 5.2:-72887238 MS.gene016748:CDS
GCTTCACCGGTTTCCGGTGG+CGG 0.463769 5.2:-72887250 MS.gene016748:CDS
TTCATTGCTCTCACAAATGC+TGG 0.468047 5.2:-72888279 MS.gene016748:CDS
AACTAAGCTACAAGCTGCAT+TGG 0.472806 5.2:-72887149 MS.gene016748:CDS
ACCACCACTGCCACCGCCAC+CGG 0.479493 5.2:+72887237 None:intergenic
CTTCTATAATGGTGTTCGGT+TGG 0.480558 5.2:+72888013 None:intergenic
ATTATAGAAGCCATTGCTGT+TGG 0.480731 5.2:-72888000 MS.gene016748:CDS
CGGAATGACCCGGAAGAAGA+AGG 0.481349 5.2:+72887829 None:intergenic
TTTAATGAAAATCAAAAGCC+CGG 0.481671 5.2:-72887382 MS.gene016748:CDS
TGCTGCAAAGAGTTGTTGGT+TGG 0.483787 5.2:+72888089 None:intergenic
GCTCTGCTTTGGGCCTAAGT+GGG 0.490576 5.2:+72887428 None:intergenic
GTTTCTTTCTGAAGTAGGCC+CGG 0.494834 5.2:+72887363 None:intergenic
ATGGCTTCTATAATGGTGTT+CGG 0.494847 5.2:+72888009 None:intergenic
TCACCGGTTTCCGGTGGCGG+TGG 0.495093 5.2:-72887247 MS.gene016748:CDS
AAAACGGTAAGCTCTGCTTT+GGG 0.501513 5.2:+72887418 None:intergenic
CTCACAAATGCTGGCAACAT+AGG 0.503433 5.2:-72888270 MS.gene016748:CDS
CGTCGATTTGAGCATCGAAA+AGG 0.510151 5.2:+72887617 None:intergenic
CCAAGAGCAGAAAGAGCAAT+GGG 0.510634 5.2:+72887862 None:intergenic
TGACCCAGCACCGGCTTCAC+CGG 0.511929 5.2:-72887263 MS.gene016748:CDS
AACCCGGGTCAGGTGGATGC+GGG 0.512461 5.2:-72887661 MS.gene016748:CDS
AAACCGGTGAAGCCGGTGCT+GGG 0.516218 5.2:+72887260 None:intergenic
TGTATACTTTCTTCTCATCC+GGG 0.517244 5.2:+72887326 None:intergenic
GAACCCGGGTCAGGTGGATG+CGG 0.523730 5.2:-72887662 MS.gene016748:CDS
AACTTCATTTCCAACAGCAA+TGG 0.527788 5.2:+72887990 None:intergenic
CCACCGGAAACCGGTGAAGC+CGG 0.527832 5.2:+72887253 None:intergenic
GCTGCAAAGAGTTGTTGGTT+GGG 0.533883 5.2:+72888090 None:intergenic
GATAATGCACGTAGAACTGA+TGG 0.534281 5.2:+72888144 None:intergenic
TTTCTTTCTGAAGTAGGCCC+GGG 0.544508 5.2:+72887364 None:intergenic
GGTGTTTCTAAGAGTACCAC+CGG 0.547486 5.2:-72887208 MS.gene016748:CDS
TATCAGAAACAGGCACGTGC+TGG 0.547720 5.2:-72887016 MS.gene016748:CDS
TCACGAAGAAAATCAAGCAT+GGG 0.551379 5.2:+72887778 None:intergenic
TTCACGAAGAAAATCAAGCA+TGG 0.551918 5.2:+72887777 None:intergenic
AAGCCGGTGCTGGGTCATCA+TGG 0.552102 5.2:+72887269 None:intergenic
AAAACGGGTTGGATTAACTC+GGG 0.554685 5.2:+72887805 None:intergenic
TCGTGAGAACCCGGGTCAGG+TGG 0.554914 5.2:-72887668 MS.gene016748:CDS
CAGAAACAGGCACGTGCTGG+TGG 0.555187 5.2:-72887013 MS.gene016748:CDS
TTACCCGCATCCACCTGACC+CGG 0.556109 5.2:+72887658 None:intergenic
GTTAACCATGAGGTAAGATC+CGG 0.556543 5.2:+72887753 None:intergenic
AGCATTTGTGAGAGCAATGA+AGG 0.561284 5.2:+72888281 None:intergenic
CATCAAAAGGGACCCCACTT+AGG 0.562771 5.2:-72887441 MS.gene016748:CDS
ACCAAGAGCAGAAAGAGCAA+TGG 0.563188 5.2:+72887861 None:intergenic
TCATTACCATCACCTTTCGA+AGG 0.568639 5.2:+72887526 None:intergenic
CTCTGCTTTGGGCCTAAGTG+GGG 0.577380 5.2:+72887429 None:intergenic
GAAACGGGTTGGCCTTCGAA+AGG 0.578195 5.2:-72887538 MS.gene016748:CDS
CGGGTTGGATTAACTCGGGT+CGG 0.591139 5.2:+72887809 None:intergenic
ATACAATGTTCCTTTAACCG+TGG 0.594163 5.2:-72887308 MS.gene016748:CDS
CCGGCTTCACCGGTTTCCGG+TGG 0.595130 5.2:-72887253 MS.gene016748:CDS
GGTTGGCCTTCGAAAGGTGA+TGG 0.601053 5.2:-72887532 MS.gene016748:CDS
TTAATGAAAATCAAAAGCCC+GGG 0.602994 5.2:-72887381 MS.gene016748:CDS
TCGTCGTTTCGGAAACGGGT+TGG 0.611751 5.2:-72887549 MS.gene016748:CDS
TTACCATGATGACCCAGCAC+CGG 0.613965 5.2:-72887272 MS.gene016748:CDS
GGAATGACCCGGAAGAAGAA+GGG 0.615815 5.2:+72887830 None:intergenic
GTAAGATCTTGACATCAAAA+GGG 0.619770 5.2:-72887453 MS.gene016748:CDS
TTGTGAGAGCAATGAAGGTG+AGG 0.629507 5.2:+72888286 None:intergenic
TACCCGCATCCACCTGACCC+GGG 0.629795 5.2:+72887659 None:intergenic
TGAAACCGGATCTTACCTCA+TGG 0.630499 5.2:-72887758 MS.gene016748:CDS
GAAGGTGAGGAAGATGAAGA+TGG 0.631749 5.2:+72888299 None:intergenic
TAACTCGGGTCGGAATGACC+CGG 0.634539 5.2:+72887819 None:intergenic
CAATGTTCCTTTAACCGTGG+AGG 0.641204 5.2:-72887305 MS.gene016748:CDS
GAGAGTGAAGAAGTTATGCA+TGG 0.646752 5.2:+72888326 None:intergenic
GAAAGGTGATGGTAATGAAG+TGG 0.650157 5.2:-72887521 MS.gene016748:CDS
GGCAACATAGGCATAAACTA+CGG 0.652226 5.2:-72888258 MS.gene016748:CDS
AAAGGTGATGGTAATGAAGT+GGG 0.661071 5.2:-72887520 MS.gene016748:CDS
AGAGTACCACCGGGAACACG+TGG 0.661853 5.2:-72887198 MS.gene016748:CDS
ATGGGTAAACGTTAACCATG+AGG 0.668625 5.2:+72887743 None:intergenic
GTTCAACTCCTCAAATCACA+AGG 0.676854 5.2:-72888198 MS.gene016748:CDS
ATAATGCACGTAGAACTGAT+GGG 0.681139 5.2:+72888145 None:intergenic
AACACACCACGTGTTCCCGG+TGG 0.717928 5.2:+72887192 None:intergenic
TGTATTAGGATCAAAACACG+TGG 0.735386 5.2:+72887075 None:intergenic
GTGTTTCTAAGAGTACCACC+GGG 0.741511 5.2:-72887207 MS.gene016748:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATCTTCATAATGATATTA+AGG - chr5.2:72887335-72887354 MS.gene016748:CDS 15.0%
!! TAACAAAAAACAATGAGAAA+AGG + chr5.2:72888306-72888325 None:intergenic 20.0%
!! TTTGTTAGATTCTTGTAATA+AGG - chr5.2:72888319-72888338 MS.gene016748:CDS 20.0%
!!! AAAAAGTGCGAATAAAAAAA+CGG + chr5.2:72887829-72887848 None:intergenic 20.0%
! CAATAGTTATTATCAGAAAC+AGG - chr5.2:72888202-72888221 MS.gene016748:CDS 25.0%
! TTGATTCATAAGCGAAAAAT+GGG + chr5.2:72887506-72887525 None:intergenic 25.0%
! TTTAATGAAAATCAAAAGCC+CGG - chr5.2:72887846-72887865 MS.gene016748:CDS 25.0%
! TTTGATTCATAAGCGAAAAA+TGG + chr5.2:72887507-72887526 None:intergenic 25.0%
!! TGATCTGTAAATGTTTTTCA+TGG + chr5.2:72887304-72887323 None:intergenic 25.0%
ATCAAGCATGGGTTTAAAAA+CGG + chr5.2:72887442-72887461 None:intergenic 30.0%
CTACTTCAGAAAGAAACTTT+GGG - chr5.2:72887871-72887890 MS.gene016748:CDS 30.0%
GTAAGATCTTGACATCAAAA+GGG - chr5.2:72887775-72887794 MS.gene016748:CDS 30.0%
GTGATTATTGAATGCTTACT+AGG + chr5.2:72888284-72888303 None:intergenic 30.0%
TTAATGAAAATCAAAAGCCC+GGG - chr5.2:72887847-72887866 MS.gene016748:CDS 30.0%
TTGTATACTTTCTTCTCATC+CGG + chr5.2:72887906-72887925 None:intergenic 30.0%
! CTTTTGATGTCAAGATCTTA+CGG + chr5.2:72887776-72887795 None:intergenic 30.0%
! TCTGTAAATGTTTTTCATGG+CGG + chr5.2:72887301-72887320 None:intergenic 30.0%
!!! AGCTTGTAGCTTAGTTTTAT+CGG + chr5.2:72888075-72888094 None:intergenic 30.0%
!!! GTGTTTTGATCCTAATACAT+TGG - chr5.2:72888157-72888176 MS.gene016748:CDS 30.0%
AACAGCAATGGCTTCTATAA+TGG + chr5.2:72887229-72887248 None:intergenic 35.0%
AACTTCATTTCCAACAGCAA+TGG + chr5.2:72887241-72887260 None:intergenic 35.0%
ATAATGCACGTAGAACTGAT+GGG + chr5.2:72887086-72887105 None:intergenic 35.0%
ATACAATGTTCCTTTAACCG+TGG - chr5.2:72887920-72887939 MS.gene016748:CDS 35.0%
ATGGCTTCTATAATGGTGTT+CGG + chr5.2:72887222-72887241 None:intergenic 35.0%
ATTATAGAAGCCATTGCTGT+TGG - chr5.2:72887228-72887247 MS.gene016748:CDS 35.0%
CCTACTTCAGAAAGAAACTT+TGG - chr5.2:72887870-72887889 MS.gene016748:CDS 35.0%
CGTAAGATCTTGACATCAAA+AGG - chr5.2:72887774-72887793 MS.gene016748:CDS 35.0%
TCAAGCATGGGTTTAAAAAC+GGG + chr5.2:72887441-72887460 None:intergenic 35.0%
TCACGAAGAAAATCAAGCAT+GGG + chr5.2:72887453-72887472 None:intergenic 35.0%
TGTATACTTTCTTCTCATCC+GGG + chr5.2:72887905-72887924 None:intergenic 35.0%
TGTATTAGGATCAAAACACG+TGG + chr5.2:72888156-72888175 None:intergenic 35.0%
TTCACGAAGAAAATCAAGCA+TGG + chr5.2:72887454-72887473 None:intergenic 35.0%
! AAAGGTGATGGTAATGAAGT+GGG - chr5.2:72887708-72887727 MS.gene016748:CDS 35.0%
! CTGTAAATGTTTTTCATGGC+GGG + chr5.2:72887300-72887319 None:intergenic 35.0%
! CTTGATTTTCTTCGTGAAAC+CGG - chr5.2:72887456-72887475 MS.gene016748:CDS 35.0%
! TCAATCTTTTGCACTCTCAT+GGG - chr5.2:72887170-72887189 MS.gene016748:CDS 35.0%
!! AAAAACGGGTTGGATTAACT+CGG + chr5.2:72887427-72887446 None:intergenic 35.0%
!! ATCGACAGTGAGTTTGATTT+TGG + chr5.2:72887115-72887134 None:intergenic 35.0%
!! CCAAAGTTTCTTTCTGAAGT+AGG + chr5.2:72887873-72887892 None:intergenic 35.0%
!! TGAACTACTTTTGTTGCTGA+AGG + chr5.2:72887015-72887034 None:intergenic 35.0%
!! TGTGTCGTAGATTTTGACAT+GGG + chr5.2:72887061-72887080 None:intergenic 35.0%
!!! AAACTTTGGGCTTTTTTACC+CGG - chr5.2:72887884-72887903 MS.gene016748:CDS 35.0%
!!! AGCTTAGTTTTATCGGCATA+AGG + chr5.2:72888068-72888087 None:intergenic 35.0%
!!! AGTGAGTTTGATTTTGGAAC+CGG + chr5.2:72887109-72887128 None:intergenic 35.0%
AAAAACGGTAAGCTCTGCTT+TGG + chr5.2:72887814-72887833 None:intergenic 40.0%
AAAACGGTAAGCTCTGCTTT+GGG + chr5.2:72887813-72887832 None:intergenic 40.0%
AACTAAGCTACAAGCTGCAT+TGG - chr5.2:72888079-72888098 MS.gene016748:CDS 40.0%
AACTCTTACCCTTCTTCTTC+CGG - chr5.2:72887390-72887409 MS.gene016748:CDS 40.0%
AGCATTTGTGAGAGCAATGA+AGG + chr5.2:72886950-72886969 None:intergenic 40.0%
ATGGGTAAACGTTAACCATG+AGG + chr5.2:72887488-72887507 None:intergenic 40.0%
CGATATAAACGTCGTCGTTT+CGG - chr5.2:72887668-72887687 MS.gene016748:CDS 40.0%
CTTCTATAATGGTGTTCGGT+TGG + chr5.2:72887218-72887237 None:intergenic 40.0%
GATAATGCACGTAGAACTGA+TGG + chr5.2:72887087-72887106 None:intergenic 40.0%
GCATGTGCAACCAATGTATT+AGG + chr5.2:72888170-72888189 None:intergenic 40.0%
GGCAACATAGGCATAAACTA+CGG - chr5.2:72886970-72886989 MS.gene016748:CDS 40.0%
GGGTTATACCTTGTGATTTG+AGG + chr5.2:72887041-72887060 None:intergenic 40.0%
GTTAACCATGAGGTAAGATC+CGG + chr5.2:72887478-72887497 None:intergenic 40.0%
GTTCAACTCCTCAAATCACA+AGG - chr5.2:72887030-72887049 MS.gene016748:CDS 40.0%
TCAGTTCTACGTGCATTATC+CGG - chr5.2:72887087-72887106 MS.gene016748:CDS 40.0%
TCATTACCATCACCTTTCGA+AGG + chr5.2:72887705-72887724 None:intergenic 40.0%
TTCATTGCTCTCACAAATGC+TGG - chr5.2:72886949-72886968 MS.gene016748:CDS 40.0%
! AGGTATTTCGTCGAGTTGTT+TGG + chr5.2:72887273-72887292 None:intergenic 40.0%
! ATTGGATTTTGCTTGTGGTG+AGG - chr5.2:72888097-72888116 MS.gene016748:CDS 40.0%
! CTCAATCTTTTGCACTCTCA+TGG - chr5.2:72887169-72887188 MS.gene016748:CDS 40.0%
! GAAAGGTGATGGTAATGAAG+TGG - chr5.2:72887707-72887726 MS.gene016748:CDS 40.0%
! TTGGATTTTGCTTGTGGTGA+GGG - chr5.2:72888098-72888117 MS.gene016748:CDS 40.0%
!! AAAACGGGTTGGATTAACTC+GGG + chr5.2:72887426-72887445 None:intergenic 40.0%
!! CTACTTTTGTTGCTGAAGGT+AGG + chr5.2:72887011-72887030 None:intergenic 40.0%
!! CTGTGTCGTAGATTTTGACA+TGG + chr5.2:72887062-72887081 None:intergenic 40.0%
!! GTAATTTTTCAACGCCTCCA+CGG + chr5.2:72887940-72887959 None:intergenic 40.0%
!!! CACGTGGCATTGTTTTGAAT+CGG + chr5.2:72888140-72888159 None:intergenic 40.0%
!!! TGGCATTGTTTTGAATCGGA+CGG + chr5.2:72888136-72888155 None:intergenic 40.0%
AAACGTCGTCGTTTCGGAAA+CGG - chr5.2:72887674-72887693 MS.gene016748:CDS 45.0%
ACCAAGAGCAGAAAGAGCAA+TGG + chr5.2:72887370-72887389 None:intergenic 45.0%
ACTCTTACCCTTCTTCTTCC+GGG - chr5.2:72887391-72887410 MS.gene016748:CDS 45.0%
CAATGTTCCTTTAACCGTGG+AGG - chr5.2:72887923-72887942 MS.gene016748:CDS 45.0%
CCAAGAGCAGAAAGAGCAAT+GGG + chr5.2:72887369-72887388 None:intergenic 45.0%
CTCACAAATGCTGGCAACAT+AGG - chr5.2:72886958-72886977 MS.gene016748:CDS 45.0%
GAAGGTGAGGAAGATGAAGA+TGG + chr5.2:72886932-72886951 None:intergenic 45.0%
GCATGGGTTTAAAAACGGGT+TGG + chr5.2:72887437-72887456 None:intergenic 45.0%
TGAAACCGGATCTTACCTCA+TGG - chr5.2:72887470-72887489 MS.gene016748:CDS 45.0%
TGCTGCAAAGAGTTGTTGGT+TGG + chr5.2:72887142-72887161 None:intergenic 45.0%
TTGCTGCTGCAAAGAGTTGT+TGG + chr5.2:72887146-72887165 None:intergenic 45.0%
TTGTGAGAGCAATGAAGGTG+AGG + chr5.2:72886945-72886964 None:intergenic 45.0%
! GCTGCAAAGAGTTGTTGGTT+GGG + chr5.2:72887141-72887160 None:intergenic 45.0%
! GCTGCATTGGATTTTGCTTG+TGG - chr5.2:72888092-72888111 MS.gene016748:CDS 45.0%
!! CGTCGATTTGAGCATCGAAA+AGG + chr5.2:72887614-72887633 None:intergenic 45.0%
!! GGTGTTTCTAAGAGTACCAC+CGG - chr5.2:72888020-72888039 MS.gene016748:CDS 45.0%
!! GTGTTTCTAAGAGTACCACC+GGG - chr5.2:72888021-72888040 MS.gene016748:CDS 45.0%
!! GTTTCTTTCTGAAGTAGGCC+CGG + chr5.2:72887868-72887887 None:intergenic 45.0%
!! TGCTCTTTTTCGTGAGAACC+CGG - chr5.2:72887551-72887570 MS.gene016748:CDS 45.0%
!! TTTCTTTCTGAAGTAGGCCC+GGG + chr5.2:72887867-72887886 None:intergenic 45.0%
!!! GCTGGTGGAAGTTGCTATTT+TGG - chr5.2:72888230-72888249 MS.gene016748:CDS 45.0%
!!! GGTGGAAGTTGCTATTTTGG+TGG - chr5.2:72888233-72888252 MS.gene016748:CDS 45.0%
AACGTCGTCGTTTCGGAAAC+GGG - chr5.2:72887675-72887694 MS.gene016748:CDS 50.0%
CATCAAAAGGGACCCCACTT+AGG - chr5.2:72887787-72887806 MS.gene016748:CDS 50.0%
CCCATTGCTCTTTCTGCTCT+TGG - chr5.2:72887366-72887385 MS.gene016748:CDS 50.0%
GGAATGACCCGGAAGAAGAA+GGG + chr5.2:72887401-72887420 None:intergenic 50.0%
TATCAGAAACAGGCACGTGC+TGG - chr5.2:72888212-72888231 MS.gene016748:CDS 50.0%
TTACCATGATGACCCAGCAC+CGG - chr5.2:72887956-72887975 MS.gene016748:CDS 50.0%
TTCAACGCCTCCACGGTTAA+AGG + chr5.2:72887933-72887952 None:intergenic 50.0%
! GATTTTGCTTGTGGTGAGGG+TGG - chr5.2:72888101-72888120 MS.gene016748:CDS 50.0%
!! GCTCTTTTTCGTGAGAACCC+GGG - chr5.2:72887552-72887571 MS.gene016748:CDS 50.0%
!! TTTTGGTGGTACGTCGTACG+TGG - chr5.2:72888247-72888266 MS.gene016748:CDS 50.0%
!!! TGTTTTTCATGGCGGGTACG+AGG + chr5.2:72887293-72887312 None:intergenic 50.0%
CGGAATGACCCGGAAGAAGA+AGG + chr5.2:72887402-72887421 None:intergenic 55.0%
TAACTCGGGTCGGAATGACC+CGG + chr5.2:72887412-72887431 None:intergenic 55.0%
TCGTCGTTTCGGAAACGGGT+TGG - chr5.2:72887679-72887698 MS.gene016748:CDS 55.0%
TGCAACACACCACGTGTTCC+CGG + chr5.2:72888042-72888061 None:intergenic 55.0%
! AGCTCTGCTTTGGGCCTAAG+TGG + chr5.2:72887804-72887823 None:intergenic 55.0%
! CGGGTTGGATTAACTCGGGT+CGG + chr5.2:72887422-72887441 None:intergenic 55.0%
! CTCTGCTTTGGGCCTAAGTG+GGG + chr5.2:72887802-72887821 None:intergenic 55.0%
! GCTCTGCTTTGGGCCTAAGT+GGG + chr5.2:72887803-72887822 None:intergenic 55.0%
! TTTTCGTGAGAACCCGGGTC+AGG - chr5.2:72887557-72887576 MS.gene016748:CDS 55.0%
!! GAAACGGGTTGGCCTTCGAA+AGG - chr5.2:72887690-72887709 MS.gene016748:CDS 55.0%
!! GGTTGGCCTTCGAAAGGTGA+TGG - chr5.2:72887696-72887715 MS.gene016748:CDS 55.0%
AAACCGGTGAAGCCGGTGCT+GGG + chr5.2:72887971-72887990 None:intergenic 60.0%
AACACACCACGTGTTCCCGG+TGG + chr5.2:72888039-72888058 None:intergenic 60.0%
CAGAAACAGGCACGTGCTGG+TGG - chr5.2:72888215-72888234 MS.gene016748:CDS 60.0%
GGTCAGGTGGATGCGGGTAA+CGG - chr5.2:72887573-72887592 MS.gene016748:CDS 60.0%
GTCAGGTGGATGCGGGTAAC+GGG - chr5.2:72887574-72887593 MS.gene016748:CDS 60.0%
TTACCCGCATCCACCTGACC+CGG + chr5.2:72887573-72887592 None:intergenic 60.0%
! AAGCCGGTGCTGGGTCATCA+TGG + chr5.2:72887962-72887981 None:intergenic 60.0%
! AGAGTACCACCGGGAACACG+TGG - chr5.2:72888030-72888049 MS.gene016748:CDS 60.0%
AACCCGGGTCAGGTGGATGC+GGG - chr5.2:72887567-72887586 MS.gene016748:CDS 65.0%
CCACCGGAAACCGGTGAAGC+CGG + chr5.2:72887978-72887997 None:intergenic 65.0%
GAAACCGGTGAAGCCGGTGC+TGG + chr5.2:72887972-72887991 None:intergenic 65.0%
GAACCCGGGTCAGGTGGATG+CGG - chr5.2:72887566-72887585 MS.gene016748:CDS 65.0%
TACCCGCATCCACCTGACCC+GGG + chr5.2:72887572-72887591 None:intergenic 65.0%
TCGTGAGAACCCGGGTCAGG+TGG - chr5.2:72887560-72887579 MS.gene016748:CDS 65.0%
!! GCACCGGCTTCACCGGTTTC+CGG - chr5.2:72887972-72887991 MS.gene016748:CDS 65.0%
!! GCTTCACCGGTTTCCGGTGG+CGG - chr5.2:72887978-72887997 MS.gene016748:CDS 65.0%
!! TGACCCAGCACCGGCTTCAC+CGG - chr5.2:72887965-72887984 MS.gene016748:CDS 65.0%
ACCACCACTGCCACCGCCAC+CGG + chr5.2:72887994-72888013 None:intergenic 70.0%
CTGCCACCGCCACCGGAAAC+CGG + chr5.2:72887987-72888006 None:intergenic 70.0%
! GTTTCCGGTGGCGGTGGCAG+TGG - chr5.2:72887987-72888006 MS.gene016748:CDS 70.0%
!! CCGGCTTCACCGGTTTCCGG+TGG - chr5.2:72887975-72887994 MS.gene016748:CDS 70.0%
!! GGTGGCAGTGGTGGTGGTGG+TGG - chr5.2:72887999-72888018 MS.gene016748:CDS 70.0%
!! TCACCGGTTTCCGGTGGCGG+TGG - chr5.2:72887981-72888000 MS.gene016748:CDS 70.0%
! GGTGGCGGTGGCAGTGGTGG+TGG - chr5.2:72887993-72888012 MS.gene016748:CDS 75.0%
! TCCGGTGGCGGTGGCAGTGG+TGG - chr5.2:72887990-72888009 MS.gene016748:CDS 75.0%
!! GGCGGTGGCAGTGGTGGTGG+TGG - chr5.2:72887996-72888015 MS.gene016748:CDS 75.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 72886904 72888346 72886904 ID=MS.gene016748
chr5.2 mRNA 72886904 72888346 72886904 ID=MS.gene016748.t1;Parent=MS.gene016748
chr5.2 exon 72886904 72888346 72886904 ID=MS.gene016748.t1.exon1;Parent=MS.gene016748.t1
chr5.2 CDS 72886904 72888346 72886904 ID=cds.MS.gene016748.t1;Parent=MS.gene016748.t1
Gene Sequence

>MS.gene016748

ATGCATAACTTCTTCACTCTCTTCACCATCTTCATCTTCCTCACCTTCATTGCTCTCACAAATGCTGGCAACATAGGCATAAACTACGGTCGTATAGCAAACAACCTACCTTCAGCAACAAAAGTAGTTCAACTCCTCAAATCACAAGGTATAACCCATGTCAAAATCTACGACACAGACCCATCAGTTCTACGTGCATTATCCGGTTCCAAAATCAAACTCACTGTCGATCTACCCAACCAACAACTCTTTGCAGCAGCAAAGTCTCAATCTTTTGCACTCTCATGGGTCGAAAGAAACATAGTTGCTTTCCAACCGAACACCATTATAGAAGCCATTGCTGTTGGAAATGAAGTTTTTGTTGATCCAAACAACTCGACGAAATACCTCGTACCCGCCATGAAAAACATTTACAGATCACTACAAAAACATAATCTTCATAATGATATTAAGGTTTCTTCACCCATTGCTCTTTCTGCTCTTGGTAACTCTTACCCTTCTTCTTCCGGGTCATTCCGACCCGAGTTAATCCAACCCGTTTTTAAACCCATGCTTGATTTTCTTCGTGAAACCGGATCTTACCTCATGGTTAACGTTTACCCATTTTTCGCTTATGAATCAAACGCTAATGTTATCTCATTAGACTATGCTCTTTTTCGTGAGAACCCGGGTCAGGTGGATGCGGGTAACGGGTTGAGATACTTGAACCTTTTCGATGCTCAAATCGACGCTGTTTTCGCAGCGCTATCTCGTTTGAAATACGACGATATAAACGTCGTCGTTTCGGAAACGGGTTGGCCTTCGAAAGGTGATGGTAATGAAGTGGGTGCGAGTGTAGAGAATGCAGCAGCATACAACGCAAATCTCGTCCGTAAGATCTTGACATCAAAAGGGACCCCACTTAGGCCCAAAGCAGAGCTTACCGTTTTTTTATTCGCACTTTTTAATGAAAATCAAAAGCCCGGGCCTACTTCAGAAAGAAACTTTGGGCTTTTTTACCCGGATGAGAAGAAAGTATACAATGTTCCTTTAACCGTGGAGGCGTTGAAAAATTACCATGATGACCCAGCACCGGCTTCACCGGTTTCCGGTGGCGGTGGCAGTGGTGGTGGTGGTGGTGTTTCTAAGAGTACCACCGGGAACACGTGGTGTGTTGCAAATCCTTATGCCGATAAAACTAAGCTACAAGCTGCATTGGATTTTGCTTGTGGTGAGGGTGGTGCTGATTGCCGTCCGATTCAAAACAATGCCACGTGTTTTGATCCTAATACATTGGTTGCACATGCTTCATTTGCGTTCAATAGTTATTATCAGAAACAGGCACGTGCTGGTGGAAGTTGCTATTTTGGTGGTACGTCGTACGTGGTCACTCAAGAGCCTAGTAAGCATTCAATAATCACCTTTTCTCATTGTTTTTTGTTAGATTCTTGTAATAAGGCGTAG
Protein sequence

>MS.gene016748.t1

MHNFFTLFTIFIFLTFIALTNAGNIGINYGRIANNLPSATKVVQLLKSQGITHVKIYDTDPSVLRALSGSKIKLTVDLPNQQLFAAAKSQSFALSWVERNIVAFQPNTIIEAIAVGNEVFVDPNNSTKYLVPAMKNIYRSLQKHNLHNDIKVSSPIALSALGNSYPSSSGSFRPELIQPVFKPMLDFLRETGSYLMVNVYPFFAYESNANVISLDYALFRENPGQVDAGNGLRYLNLFDAQIDAVFAALSRLKYDDINVVVSETGWPSKGDGNEVGASVENAAAYNANLVRKILTSKGTPLRPKAELTVFLFALFNENQKPGPTSERNFGLFYPDEKKVYNVPLTVEALKNYHDDPAPASPVSGGGGSGGGGGVSKSTTGNTWCVANPYADKTKLQAALDFACGEGGADCRPIQNNATCFDPNTLVAHASFAFNSYYQKQARAGGSCYFGGTSYVVTQEPSKHSIITFSHCFLLDSCNKA