AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene034741

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene034741.t1 MTR_1g056640 97.964 393 8 0 1 393 91 483 0.0 799
MS.gene034741.t1 MTR_5g085580 62.183 394 136 2 1 393 78 459 1.29e-177 503
MS.gene034741.t1 MTR_3g080410 68.889 270 84 0 1 270 79 348 8.07e-134 387
MS.gene034741.t1 MTR_7g053500 41.646 401 198 8 1 393 2 374 5.35e-102 307
MS.gene034741.t1 MTR_7g053500 41.646 401 198 8 1 393 79 451 4.25e-101 308
MS.gene034741.t1 MTR_8g102340 40.682 381 198 3 13 393 59 411 8.96e-100 305
MS.gene034741.t1 MTR_6g088885 39.594 394 211 4 1 393 80 447 8.28e-98 301
MS.gene034741.t1 MTR_8g012400 39.547 397 209 7 1 393 2 371 2.54e-96 293
MS.gene034741.t1 MTR_8g012400 39.547 397 209 7 1 393 82 451 1.15e-95 294
MS.gene034741.t1 MTR_1g031900 39.141 396 204 3 1 393 77 438 5.75e-95 293
MS.gene034741.t1 MTR_1g031900 39.141 396 204 3 1 393 77 438 8.72e-95 293
MS.gene034741.t1 MTR_4g088155 38.346 399 216 6 1 393 76 450 4.45e-94 290
MS.gene034741.t1 MTR_3g083580 38.684 380 193 5 18 393 96 439 3.12e-93 288
MS.gene034741.t1 MTR_4g069940 40.160 376 201 5 19 393 100 452 3.90e-93 287
MS.gene034741.t1 MTR_3g065460 39.141 396 204 3 1 393 77 438 1.25e-92 287
MS.gene034741.t1 MTR_4g132280 38.636 396 206 5 1 393 98 459 2.94e-91 284
MS.gene034741.t1 MTR_8g085720 38.624 378 196 4 19 393 97 441 4.16e-91 283
MS.gene034741.t1 MTR_3g116510 38.579 394 210 5 3 393 83 447 2.29e-90 280
MS.gene034741.t1 MTR_5g078200 38.636 396 206 5 1 393 43 404 1.21e-88 280
MS.gene034741.t1 MTR_5g078200 38.636 396 206 5 1 393 76 437 2.67e-88 280
MS.gene034741.t1 MTR_1g022160 37.406 401 223 7 6 393 82 467 4.07e-86 270
MS.gene034741.t1 MTR_1g022160 37.406 401 223 7 6 393 82 467 5.04e-86 269
MS.gene034741.t1 MTR_1g022160 37.406 401 223 7 6 393 82 467 5.54e-86 270
MS.gene034741.t1 MTR_4g083500 41.005 378 206 8 19 393 115 478 5.73e-85 268
MS.gene034741.t1 MTR_7g026340 38.889 378 198 8 19 393 94 441 2.08e-81 256
MS.gene034741.t1 MTR_3g116510 38.889 342 178 4 54 393 1 313 9.75e-81 251
MS.gene034741.t1 MTR_4g084480 45.017 291 156 3 19 308 95 382 3.14e-78 246
MS.gene034741.t1 MTR_1g077990 48.485 264 132 4 3 265 86 346 6.73e-78 246
MS.gene034741.t1 MTR_4g084480 46.263 281 147 3 19 298 102 379 7.11e-77 243
MS.gene034741.t1 MTR_4g052970 49.402 251 123 3 19 267 99 347 9.18e-77 243
MS.gene034741.t1 MTR_4g084480 48.659 261 130 3 19 278 102 359 1.11e-76 243
MS.gene034741.t1 MTR_4g010200 43.866 269 149 2 1 268 86 353 2.54e-74 236
MS.gene034741.t1 MTR_2g086530 43.825 251 139 2 18 267 75 324 2.46e-71 228
MS.gene034741.t1 MTR_2g086530 43.825 251 139 2 18 267 96 345 5.33e-71 228
MS.gene034741.t1 MTR_1g007810 46.154 247 128 2 19 264 87 329 1.67e-70 226
MS.gene034741.t1 MTR_2g019345 46.774 248 129 3 19 265 94 339 5.87e-70 225
MS.gene034741.t1 MTR_4g114850 44.177 249 135 3 8 255 88 333 6.62e-65 211
MS.gene034741.t1 MTR_4g114850 44.177 249 135 3 8 255 88 333 7.11e-65 211
MS.gene034741.t1 MTR_4g114850 44.177 249 135 3 8 255 88 333 1.57e-64 211
MS.gene034741.t1 MTR_1g022160 40.377 265 155 3 6 268 82 345 3.36e-62 206
MS.gene034741.t1 MTR_4g076500 42.085 259 137 5 1 257 131 378 4.29e-58 194
MS.gene034741.t1 MTR_4g076255 40.377 265 144 7 1 265 78 328 1.78e-55 186
MS.gene034741.t1 MTR_4g076470 40.234 256 140 6 8 263 82 324 1.66e-54 183
MS.gene034741.t1 MTR_1g052430 41.045 268 145 7 1 265 85 342 2.87e-54 185
MS.gene034741.t1 MTR_4g076490 40.385 260 139 7 8 265 156 401 4.60e-54 184
MS.gene034741.t1 MTR_4g076440 41.129 248 131 7 19 265 93 326 7.73e-53 179
MS.gene034741.t1 MTR_2g034480 38.951 267 148 8 1 263 80 335 1.88e-52 179
MS.gene034741.t1 MTR_4g076430 40.726 248 132 7 19 265 93 326 1.14e-51 176
MS.gene034741.t1 MTR_2g034470 38.202 267 150 8 1 263 48 303 3.37e-51 174
MS.gene034741.t1 MTR_2g034470 38.202 267 150 8 1 263 83 338 4.65e-51 175
MS.gene034741.t1 MTR_2g034440 38.113 265 149 9 1 261 75 328 7.34e-50 171
MS.gene034741.t1 MTR_7g081350 36.398 261 157 6 3 263 82 333 4.43e-49 169
MS.gene034741.t1 MTR_4g076570 36.331 278 165 7 3 277 77 345 2.61e-48 168
MS.gene034741.t1 MTR_4g112025 31.514 403 229 16 1 393 84 449 4.68e-47 168
MS.gene034741.t1 MTR_1g053320 30.521 403 234 15 1 393 83 449 8.69e-47 167
MS.gene034741.t1 MTR_2g027560 31.671 401 228 14 1 393 81 443 6.50e-45 162
MS.gene034741.t1 MTR_7g081370 35.249 261 147 7 3 263 83 321 1.86e-43 154
MS.gene034741.t1 MTR_8g092070 27.431 401 246 15 1 393 87 450 3.75e-41 153
MS.gene034741.t1 MTR_3g095050 29.426 401 237 17 1 393 86 448 1.03e-40 150
MS.gene034741.t1 MTR_3g031770 29.000 400 236 15 1 393 80 438 1.59e-40 150
MS.gene034741.t1 MTR_5g081720 35.448 268 161 7 1 264 90 349 4.03e-40 146
MS.gene034741.t1 MTR_1g010120 28.960 404 235 16 1 393 79 441 6.94e-40 148
MS.gene034741.t1 MTR_4g134280 31.694 366 203 16 36 393 3 329 1.06e-39 145
MS.gene034741.t1 MTR_4g124440 27.612 402 242 13 1 393 81 442 7.02e-39 145
MS.gene034741.t1 MTR_3g108600 27.861 402 224 15 1 393 84 428 4.54e-36 137
MS.gene034741.t1 MTR_7g085390 28.250 400 231 20 1 386 79 436 4.10e-35 135
MS.gene034741.t1 MTR_6g032820 29.000 400 227 19 1 384 79 437 6.42e-35 134
MS.gene034741.t1 MTR_5g015720 28.173 394 240 10 3 393 54 407 5.45e-34 130
MS.gene034741.t1 MTR_1g084820 60.976 82 30 2 312 393 416 495 1.34e-25 108
MS.gene034741.t1 MTR_1g084820 60.976 82 30 2 312 393 416 495 1.58e-25 108
MS.gene034741.t1 MTR_8g089400 50.000 100 45 1 299 393 15 114 8.95e-25 99.8
MS.gene034741.t1 MTR_3g048280 44.628 121 55 3 273 393 80 188 9.46e-25 100
MS.gene034741.t1 MTR_8g085400 53.933 89 36 3 305 393 23 106 1.97e-24 97.4
MS.gene034741.t1 MTR_8g089400 50.000 100 45 1 299 393 35 134 2.92e-24 99.0
MS.gene034741.t1 MTR_8g085390 53.165 79 36 1 315 393 29 106 2.24e-23 96.7
MS.gene034741.t1 MTR_8g085440 48.315 89 43 2 305 393 23 108 2.93e-23 94.0
MS.gene034741.t1 MTR_8g085420 47.191 89 44 2 305 393 23 108 1.10e-22 93.2
MS.gene034741.t1 MTR_3g082080 55.128 78 34 1 316 393 157 233 1.45e-22 95.9
MS.gene034741.t1 MTR_5g097420 51.250 80 39 0 314 393 28 107 6.65e-22 90.5
MS.gene034741.t1 MTR_7g111600 39.073 151 68 5 266 393 87 236 7.82e-22 94.4
MS.gene034741.t1 MTR_7g111600 39.073 151 68 5 266 393 87 236 1.28e-21 94.7
MS.gene034741.t1 MTR_7g111600 39.073 151 68 5 266 393 87 236 1.75e-21 94.4
MS.gene034741.t1 MTR_5g091650 50.617 81 39 1 313 393 105 184 5.21e-21 90.5
MS.gene034741.t1 MTR_5g091650 50.617 81 39 1 313 393 105 184 8.78e-21 91.7
MS.gene034741.t1 MTR_4g109490 55.128 78 33 2 316 393 24 99 2.25e-19 86.3
MS.gene034741.t1 MTR_4g133735 49.333 75 38 0 312 386 24 98 2.65e-19 83.2
MS.gene034741.t1 MTR_1g116870 47.436 78 40 1 316 393 276 352 6.20e-19 87.8
MS.gene034741.t1 MTR_4g133730 47.887 71 37 0 316 386 28 98 4.06e-18 80.1
MS.gene034741.t1 MTR_2g049670 53.846 78 34 2 316 393 158 233 5.42e-18 84.7
MS.gene034741.t1 MTR_4g083070 45.455 88 46 2 306 393 11 96 5.52e-18 82.0
MS.gene034741.t1 MTR_8g088120 55.714 70 30 1 324 393 56 124 7.15e-18 82.4
MS.gene034741.t1 MTR_5g044530 46.053 76 40 1 311 386 17 91 9.37e-17 79.7
MS.gene034741.t1 MTR_4g079530 43.902 82 46 0 312 393 33 114 6.97e-16 73.9
MS.gene034741.t1 MTR_4g079530 43.902 82 46 0 312 393 33 114 9.81e-16 75.1
MS.gene034741.t1 MTR_4g036775 40.777 103 55 3 179 281 94 190 3.27e-15 74.7
MS.gene034741.t1 MTR_4g036680 40.777 103 55 3 179 281 94 190 4.33e-15 74.3
MS.gene034741.t1 MTR_8g471000 35.714 84 53 1 53 136 5 87 2.18e-12 63.2
MS.gene034741.t1 MTR_2g072500 39.759 83 48 1 311 393 3 83 1.60e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene034741.t1 AT5G55180 70.992 393 91 3 1 393 80 449 0.0 559
MS.gene034741.t1 AT5G55180 70.992 393 91 3 1 393 80 449 0.0 557
MS.gene034741.t1 AT4G26830 66.921 393 104 4 1 393 82 448 0.0 530
MS.gene034741.t1 AT4G26830 66.921 393 104 4 1 393 78 444 0.0 530
MS.gene034741.t1 AT2G05790 64.721 394 128 4 1 393 78 461 0.0 523
MS.gene034741.t1 AT5G56590 39.241 395 211 4 1 393 79 446 1.55e-98 302
MS.gene034741.t1 AT3G07320 40.554 397 206 6 1 393 78 448 1.55e-95 293
MS.gene034741.t1 AT4G29360 39.646 396 229 4 1 393 80 468 3.69e-95 295
MS.gene034741.t1 AT4G29360 39.646 396 229 4 1 393 90 478 3.77e-95 295
MS.gene034741.t1 AT2G16230 39.846 389 204 6 6 393 83 442 5.65e-94 291
MS.gene034741.t1 AT5G24318 40.160 376 196 6 19 393 101 448 2.35e-93 287
MS.gene034741.t1 AT5G24318 40.160 376 196 6 19 393 101 448 5.40e-93 286
MS.gene034741.t1 AT1G66250 39.141 396 203 4 1 393 85 445 1.62e-92 287
MS.gene034741.t1 AT2G01630 37.626 396 210 4 1 393 76 437 8.04e-91 280
MS.gene034741.t1 AT2G01630 37.626 396 210 4 1 393 76 437 5.20e-90 280
MS.gene034741.t1 AT4G14080 36.364 396 225 5 1 393 95 466 1.81e-89 278
MS.gene034741.t1 AT3G13560 37.831 378 197 4 19 393 97 439 4.51e-89 278
MS.gene034741.t1 AT3G13560 37.831 378 197 4 19 393 97 439 4.51e-89 278
MS.gene034741.t1 AT3G13560 37.831 378 197 4 19 393 97 439 4.51e-89 278
MS.gene034741.t1 AT3G13560 37.831 378 197 4 19 393 97 439 4.51e-89 278
MS.gene034741.t1 AT3G13560 37.831 378 197 4 19 393 97 439 4.51e-89 278
MS.gene034741.t1 AT1G11820 37.121 396 212 3 1 393 97 458 7.12e-89 277
MS.gene034741.t1 AT1G11820 37.121 396 212 3 1 393 97 458 1.33e-88 277
MS.gene034741.t1 AT4G34480 40.979 388 194 7 8 393 86 440 1.89e-88 276
MS.gene034741.t1 AT3G23770 37.093 399 221 5 1 393 90 464 1.69e-85 268
MS.gene034741.t1 AT5G24318 40.059 337 174 5 57 393 1 309 6.55e-84 259
MS.gene034741.t1 AT4G34480 40.833 360 178 7 36 393 3 329 5.57e-81 254
MS.gene034741.t1 AT1G30080 48.485 264 133 3 3 265 91 352 7.83e-79 248
MS.gene034741.t1 AT1G30080 48.485 264 133 3 3 265 91 352 1.27e-78 248
MS.gene034741.t1 AT2G27500 45.455 264 142 2 3 265 6 268 2.67e-78 244
MS.gene034741.t1 AT2G27500 45.455 264 142 2 3 265 84 346 1.36e-77 244
MS.gene034741.t1 AT2G27500 45.455 264 142 2 3 265 84 346 2.66e-77 244
MS.gene034741.t1 AT1G32860 46.067 267 137 5 3 265 84 347 8.84e-75 239
MS.gene034741.t1 AT4G18340 46.992 266 138 3 19 282 104 368 9.96e-74 234
MS.gene034741.t1 AT4G18340 46.992 266 138 3 19 282 104 368 2.17e-73 234
MS.gene034741.t1 AT3G55430 34.794 388 216 10 9 393 89 442 5.39e-73 235
MS.gene034741.t1 AT5G42100 45.693 267 139 5 3 265 82 346 7.51e-71 228
MS.gene034741.t1 AT5G42100 45.693 267 139 5 3 265 82 346 1.01e-70 228
MS.gene034741.t1 AT2G01630 36.494 348 184 4 1 345 76 389 2.80e-70 226
MS.gene034741.t1 AT5G24318 44.758 248 132 2 19 265 101 344 1.18e-69 224
MS.gene034741.t1 AT5G42720 43.729 295 159 6 10 300 88 379 1.35e-69 226
MS.gene034741.t1 AT4G34480 44.030 268 146 3 8 273 86 351 2.66e-66 214
MS.gene034741.t1 AT3G15800 41.176 289 167 3 3 289 98 385 3.73e-66 216
MS.gene034741.t1 AT2G26600 41.729 266 153 2 1 265 87 351 4.66e-65 213
MS.gene034741.t1 AT2G26600 42.857 259 144 3 8 265 2 257 1.20e-64 208
MS.gene034741.t1 AT2G39640 33.245 376 210 10 19 393 100 435 4.44e-60 204
MS.gene034741.t1 AT2G39640 34.524 84 54 1 310 393 454 536 1.70e-13 72.4
MS.gene034741.t1 AT1G11820 38.346 266 160 2 1 263 97 361 2.77e-57 192
MS.gene034741.t1 AT4G16260 40.221 271 153 6 1 271 48 309 1.81e-56 188
MS.gene034741.t1 AT4G16260 40.221 271 153 6 1 271 77 338 3.64e-56 188
MS.gene034741.t1 AT3G57270 39.850 266 151 6 1 265 80 337 3.40e-55 185
MS.gene034741.t1 AT3G46570 42.205 263 141 7 18 277 98 352 1.54e-54 184
MS.gene034741.t1 AT3G61810 36.667 270 158 3 1 265 108 369 9.41e-53 180
MS.gene034741.t1 AT5G20390 42.085 259 141 6 3 261 89 338 4.30e-52 177
MS.gene034741.t1 AT1G77780 37.262 263 156 7 3 265 79 332 7.05e-47 164
MS.gene034741.t1 AT5G20330 41.564 243 133 6 19 261 106 339 1.21e-46 163
MS.gene034741.t1 AT1G77790 37.736 265 155 7 3 265 85 341 3.39e-46 162
MS.gene034741.t1 AT3G24330 30.198 404 233 15 1 393 92 457 3.53e-46 166
MS.gene034741.t1 AT5G20340 39.080 261 149 7 6 265 102 353 1.62e-45 160
MS.gene034741.t1 AT1G33220 39.841 251 142 6 6 255 93 335 1.24e-44 157
MS.gene034741.t1 AT3G57240 36.842 266 152 9 1 265 88 338 2.04e-44 157
MS.gene034741.t1 AT3G57260 35.472 265 158 7 1 265 85 336 7.60e-43 153
MS.gene034741.t1 AT3G57260 35.472 265 158 7 1 265 101 352 1.45e-42 152
MS.gene034741.t1 AT4G17180 31.250 400 224 15 1 393 78 433 1.62e-42 155
MS.gene034741.t1 AT5G20870 30.695 417 218 22 1 393 83 452 3.74e-41 152
MS.gene034741.t1 AT5G58090 28.218 404 239 16 1 393 75 438 4.28e-39 146
MS.gene034741.t1 AT4G31140 28.358 402 239 15 1 393 80 441 6.90e-39 145
MS.gene034741.t1 AT3G55780 31.660 259 170 4 1 256 88 342 1.11e-38 143
MS.gene034741.t1 AT5G18220 28.642 405 234 17 1 391 83 446 2.89e-38 144
MS.gene034741.t1 AT3G04010 28.109 402 239 16 1 391 86 448 3.80e-38 144
MS.gene034741.t1 AT5G64790 29.397 398 232 18 1 388 81 439 7.84e-38 142
MS.gene034741.t1 AT1G64760 29.208 404 231 18 1 391 78 439 1.75e-37 141
MS.gene034741.t1 AT1G64760 29.208 404 231 18 1 391 78 439 1.75e-37 141
MS.gene034741.t1 AT2G19440 29.032 403 233 18 1 391 74 435 8.67e-37 139
MS.gene034741.t1 AT2G19440 29.032 403 233 18 1 391 74 435 8.67e-37 139
MS.gene034741.t1 AT5G58480 25.436 401 249 13 1 393 79 437 1.24e-29 119
MS.gene034741.t1 AT5G20560 33.333 261 158 8 1 257 88 336 4.17e-29 116
MS.gene034741.t1 AT5G67460 44.737 114 63 0 280 393 257 370 4.44e-26 108
MS.gene034741.t1 AT5G67460 44.737 114 63 0 280 393 257 370 5.26e-26 108
MS.gene034741.t1 AT2G30933 56.250 80 34 1 314 393 80 158 1.66e-23 96.3
MS.gene034741.t1 AT2G30933 56.250 80 34 1 314 393 80 158 1.66e-23 96.3
MS.gene034741.t1 AT2G30933 56.250 80 34 1 314 393 80 158 4.68e-23 97.1
MS.gene034741.t1 AT1G29380 58.974 78 31 1 316 393 148 224 9.74e-23 95.9
MS.gene034741.t1 AT1G29380 58.974 78 31 1 316 393 148 224 9.74e-23 95.9
MS.gene034741.t1 AT1G29380 58.974 78 31 1 316 393 148 224 2.27e-22 95.9
MS.gene034741.t1 AT1G29380 58.974 78 31 1 316 393 148 224 2.62e-22 96.7
MS.gene034741.t1 AT2G04910 46.154 78 42 0 316 393 15 92 1.96e-21 89.4
MS.gene034741.t1 AT1G18650 55.556 72 31 1 315 386 20 90 2.03e-21 89.7
MS.gene034741.t1 AT1G18650 49.383 81 40 1 306 386 11 90 3.13e-21 90.9
MS.gene034741.t1 AT1G09460 56.098 82 33 2 312 393 133 211 4.18e-21 93.6
MS.gene034741.t1 AT2G04910 46.154 78 42 0 316 393 15 92 6.69e-21 87.4
MS.gene034741.t1 AT4G13600 50.000 78 38 1 316 393 61 137 9.04e-21 90.5
MS.gene034741.t1 AT5G35740 47.059 85 44 1 310 393 24 108 3.45e-20 85.9
MS.gene034741.t1 AT1G79480 50.000 78 38 1 316 393 311 387 1.08e-19 90.5
MS.gene034741.t1 AT4G05430 42.000 100 56 1 287 386 21 118 1.09e-19 84.7
MS.gene034741.t1 AT1G79480 50.000 78 38 1 316 393 310 386 1.12e-19 90.5
MS.gene034741.t1 AT1G66870 43.902 82 46 0 312 393 22 103 1.39e-19 84.0
MS.gene034741.t1 AT1G66870 44.444 81 45 0 313 393 50 130 1.92e-19 84.3
MS.gene034741.t1 AT4G05430 46.988 83 42 1 304 386 13 93 2.51e-19 84.3
MS.gene034741.t1 AT4G05430 46.988 83 42 1 304 386 38 118 2.69e-19 84.7
MS.gene034741.t1 AT1G66855 39.506 81 49 0 313 393 23 103 1.59e-18 80.9
MS.gene034741.t1 AT1G69295 47.727 88 44 2 306 393 11 96 1.92e-18 84.0
MS.gene034741.t1 AT1G69295 52.564 78 35 2 316 393 17 92 3.82e-18 82.8
MS.gene034741.t1 AT5G63250 47.674 86 42 3 310 393 37 121 4.75e-18 80.5
MS.gene034741.t1 AT1G26450 57.812 64 26 1 325 388 29 91 1.82e-17 80.5
MS.gene034741.t1 AT5G63225 51.429 70 33 1 314 383 23 91 1.86e-17 78.2
MS.gene034741.t1 AT5G61130 43.038 79 44 1 315 393 20 97 4.12e-17 79.7
MS.gene034741.t1 AT5G53600 41.250 80 45 1 314 393 27 104 5.37e-17 76.6
MS.gene034741.t1 AT5G08000 45.714 70 37 1 313 382 37 105 8.67e-17 79.0
MS.gene034741.t1 AT5G63230 40.909 88 51 1 306 393 16 102 4.22e-16 74.3
MS.gene034741.t1 AT4G09462 44.928 69 37 1 314 382 27 94 7.33e-16 73.6
MS.gene034741.t1 AT3G58100 40.659 91 50 1 303 393 32 118 7.65e-16 75.5
MS.gene034741.t1 AT5G08000 45.588 68 36 1 315 382 20 86 8.90e-16 75.9
MS.gene034741.t1 AT5G53610 43.590 78 42 1 316 393 28 103 1.00e-15 73.2
MS.gene034741.t1 AT3G58100 40.659 91 50 1 303 393 108 194 1.09e-15 76.6
MS.gene034741.t1 AT1G66852 41.667 84 44 2 312 393 22 102 1.21e-15 72.8
MS.gene034741.t1 AT4G09090 46.269 67 35 1 316 382 31 96 1.51e-15 72.8
MS.gene034741.t1 AT4G09465 38.750 80 48 1 314 393 29 107 9.92e-15 70.5
MS.gene034741.t1 AT4G09467 38.750 80 48 1 314 393 29 107 1.16e-14 70.5
MS.gene034741.t1 AT4G09464 38.750 80 48 1 314 393 29 107 1.16e-14 70.5
MS.gene034741.t1 AT4G16165 35.366 82 53 0 312 393 22 103 1.54e-14 69.7
MS.gene034741.t1 AT4G09466 37.500 80 49 1 314 393 29 107 1.12e-13 67.4
MS.gene034741.t1 AT2G03505 40.278 72 42 1 315 386 20 90 3.50e-13 66.2
MS.gene034741.t1 AT1G13830 40.541 74 43 1 313 386 32 104 4.32e-13 68.6
MS.gene034741.t1 AT2G03505 40.278 72 42 1 315 386 20 90 5.04e-13 67.0
MS.gene034741.t1 AT2G03505 40.278 72 42 1 315 386 20 90 5.04e-13 67.0
MS.gene034741.t1 AT2G03505 40.278 72 42 1 315 386 20 90 5.04e-13 67.0
MS.gene034741.t1 AT5G63240 38.372 86 50 3 310 393 35 119 1.62e-12 64.7
MS.gene034741.t1 AT1G13830 40.845 71 41 1 316 386 21 90 1.96e-12 66.2
MS.gene034741.t1 AT2G29735 41.892 74 41 2 309 382 25 96 2.46e-12 63.9
MS.gene034741.t1 AT2G42930 38.462 78 46 2 316 393 40 115 3.00e-11 61.2
MS.gene034741.t1 AT2G43670 31.818 88 58 1 306 393 25 110 5.18e-11 60.1

Find 100 sgRNAs with CRISPR-Local

Find 126 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAACCGGTTCTTATTTAA+TGG 0.191315 1.2:+44725088 MS.gene034741:CDS
AGAGGGTCCTTAGGTCTTAA+AGG 0.304307 1.2:-44725419 None:intergenic
AACCCTGGTGTTGTTGATTC+TGG 0.308011 1.2:+44725185 MS.gene034741:CDS
GCATGTGCCTCCAAAGTATT+AGG 0.332570 1.2:-44725815 None:intergenic
AAGATAACTGTTTCTGAAAC+GGG 0.336859 1.2:+44725293 MS.gene034741:CDS
GTGTGGCGGGGTAGTGGTTA+AGG 0.353337 1.2:-44724824 None:intergenic
GGGGTAGTGGTTAAGGATGT+TGG 0.358288 1.2:-44724817 None:intergenic
ACAATGGTAATTTAGTGAAA+AGG 0.373660 1.2:+44725375 MS.gene034741:CDS
GAGGGTCCTTAGGTCTTAAA+GGG 0.373757 1.2:-44725418 None:intergenic
TGCAGACATGGCAGCATTAA+CGG 0.384911 1.2:-44725252 None:intergenic
CAATGGTAATTTAGTGAAAA+GGG 0.390826 1.2:+44725376 MS.gene034741:CDS
CAAAACCGAACTTGTTGAAC+CGG 0.392666 1.2:+44725037 MS.gene034741:CDS
GCGGAGGAGAGAAGCTCATT+TGG 0.394223 1.2:-44724756 None:intergenic
TGTAAAGCAGATAGTGCTAT+TGG 0.398352 1.2:-44724984 None:intergenic
TGTGGCGAATGGTGGTTATT+CGG 0.400384 1.2:+44725703 MS.gene034741:CDS
GTGTTATAATCCTAATACTT+TGG 0.401298 1.2:+44725805 MS.gene034741:CDS
GTGTCAGTGGTTGAGAATAA+AGG 0.402283 1.2:+44725668 MS.gene034741:CDS
CAGGCTCCAGTGGCGGGTGT+AGG 0.402892 1.2:+44725614 MS.gene034741:CDS
TCTTCTTACCCTACCTCAAC+CGG 0.409837 1.2:+44725008 MS.gene034741:CDS
AGGCTCCAGTGGCGGGTGTA+GGG 0.415016 1.2:+44725615 MS.gene034741:CDS
CTATTTGTGTGGCGGGGTAG+TGG 0.421711 1.2:-44724830 None:intergenic
CACGTGGCACCCGGTTGAAT+CGG 0.422087 1.2:-44725785 None:intergenic
CATGGCGGGTACGAGGTAGT+TGG 0.438364 1.2:-44724901 None:intergenic
AATAACCGGTTCAACAAGTT+CGG 0.440240 1.2:-44725042 None:intergenic
TAAGATAACTGTTTCTGAAA+CGG 0.441815 1.2:+44725292 MS.gene034741:CDS
ATGGCTTCTATTTGTGTGGC+GGG 0.443354 1.2:-44724837 None:intergenic
GTTAACCATTAAATAAGAAC+CGG 0.447344 1.2:-44725093 None:intergenic
TCAGCGCAGGCTCCAGTGGC+GGG 0.450140 1.2:+44725608 MS.gene034741:CDS
TCGAGCATCGGTTTAATAAC+CGG 0.453310 1.2:-44725056 None:intergenic
TGATTGTGCTCCGATTCAAC+CGG 0.456231 1.2:+44725775 MS.gene034741:CDS
GAAACGGGGTGGCCTTCGTT+AGG 0.456528 1.2:+44725308 MS.gene034741:CDS
GGAGCCTGCGCTGACTCCAT+TGG 0.457917 1.2:-44725599 None:intergenic
TGTCAGTGGTTGAGAATAAA+GGG 0.472795 1.2:+44725669 MS.gene034741:CDS
AAAACATTAAGAGGGTCCTT+AGG 0.475635 1.2:-44725428 None:intergenic
CTCGAGTTTCTACGTCAAAC+CGG 0.491307 1.2:+44725074 MS.gene034741:CDS
GTCAGCGCAGGCTCCAGTGG+CGG 0.497248 1.2:+44725607 MS.gene034741:CDS
TTAGGTGATAGCAATGAGAT+TGG 0.504036 1.2:+44725326 MS.gene034741:CDS
AGTGGTTAAGGATGTTGGAT+TGG 0.509507 1.2:-44724812 None:intergenic
AGATTAAAATTTGTTTGTCT+AGG 0.511137 1.2:-44724956 None:intergenic
TAAATCTTCGACACCGGTAG+CGG 0.514681 1.2:+44725571 MS.gene034741:CDS
CTCCTCCCTACACCCGCCAC+TGG 0.516279 1.2:-44725620 None:intergenic
GTCTCCAATGGAGTCAGCGC+AGG 0.517280 1.2:+44725595 MS.gene034741:CDS
TTATAATCCTAATACTTTGG+AGG 0.523932 1.2:+44725808 MS.gene034741:CDS
TTGAATGAACCGGTTGAGGT+AGG 0.527736 1.2:-44725017 None:intergenic
CTTGATTATGCGTGTGGGGA+AGG 0.532027 1.2:+44725746 MS.gene034741:CDS
TCCATTGGAGACTCCGCTAC+CGG 0.532458 1.2:-44725584 None:intergenic
CTCCAGTGGCGGGTGTAGGG+AGG 0.533461 1.2:+44725618 MS.gene034741:CDS
TGAATGAACCGGTTGAGGTA+GGG 0.534233 1.2:-44725016 None:intergenic
GGAGTCAGCGCAGGCTCCAG+TGG 0.537251 1.2:+44725604 MS.gene034741:CDS
GGATTATAACACGTGGCACC+CGG 0.549858 1.2:-44725794 None:intergenic
AATGGCTTCTATTTGTGTGG+CGG 0.558913 1.2:-44724838 None:intergenic
AGCAATGGCTTCTATTTGTG+TGG 0.560482 1.2:-44724841 None:intergenic
GACTAATAAATCTTCGACAC+CGG 0.561609 1.2:+44725565 MS.gene034741:CDS
ACCGGTAGCGGAGTCTCCAA+TGG 0.564011 1.2:+44725583 MS.gene034741:CDS
CAAATAGAAGCCATTGCTGT+CGG 0.564939 1.2:+44724846 MS.gene034741:CDS
CACGCGCTTGATTATGCGTG+TGG 0.567618 1.2:+44725740 MS.gene034741:CDS
GACAATGCTGCTTCTTACAA+TGG 0.568229 1.2:+44725359 MS.gene034741:CDS
ATCATATTGAAGTGCAGACA+TGG 0.572922 1.2:-44725264 None:intergenic
AACCTCGTTTCCGACAGCAA+TGG 0.574493 1.2:-44724856 None:intergenic
ATCAATCCTACACCGACACA+TGG 0.575276 1.2:+44724787 MS.gene034741:CDS
GGATTGATCGGCTGCAGCGG+AGG 0.575307 1.2:-44724772 None:intergenic
TGGGACCCCTTTAAGACCTA+AGG 0.575353 1.2:+44725412 MS.gene034741:CDS
TGTGTCGGTGTAGGATTGAT+CGG 0.579882 1.2:-44724784 None:intergenic
ATAGTAACTATTGAAAGCAA+AGG 0.580352 1.2:-44725840 None:intergenic
GGCGGGTGTAGGGAGGAGTA+AGG 0.582719 1.2:+44725625 MS.gene034741:CDS
GACACATCACCACCACTCAC+AGG 0.585277 1.2:-44725650 None:intergenic
TTGAGAATAAAGGGCAAACA+TGG 0.586606 1.2:+44725678 MS.gene034741:CDS
TTAGTCTCTGACACGGTCAA+CGG 0.594473 1.2:-44725548 None:intergenic
TGACGTAGAAACTCGAGCAT+CGG 0.596414 1.2:-44725068 None:intergenic
ACGCGCTTGATTATGCGTGT+GGG 0.599198 1.2:+44725741 MS.gene034741:CDS
CGCGCTTGATTATGCGTGTG+GGG 0.602803 1.2:+44725742 MS.gene034741:CDS
TTGGATCCATGTGTCGGTGT+AGG 0.604328 1.2:-44724793 None:intergenic
GCTTTGTTTAAGCAAAACCC+TGG 0.613711 1.2:+44725170 MS.gene034741:CDS
GATAGCAATGAGATTGGTGC+TGG 0.613914 1.2:+44725332 MS.gene034741:CDS
GGAGAGAAGCTCATTTGGCA+TGG 0.616987 1.2:-44724751 None:intergenic
GATTATGCGTGTGGGGAAGG+TGG 0.618016 1.2:+44725749 MS.gene034741:CDS
TTACCAGAATCAACAACACC+AGG 0.620171 1.2:-44725188 None:intergenic
CAAACATGGTGTGTGGCGAA+TGG 0.623219 1.2:+44725692 MS.gene034741:CDS
GTAGGATTGATCGGCTGCAG+CGG 0.624638 1.2:-44724775 None:intergenic
GAGTGGTGGTGATGTGTCAG+TGG 0.626261 1.2:+44725655 MS.gene034741:CDS
TGGCTTCTATTTGTGTGGCG+GGG 0.633456 1.2:-44724836 None:intergenic
AGCCATTGCTGTCGGAAACG+AGG 0.633469 1.2:+44724854 MS.gene034741:CDS
GATTGTGCTCCGATTCAACC+GGG 0.633837 1.2:+44725776 MS.gene034741:CDS
AGGAGTAAGGTACCTGTGAG+TGG 0.639125 1.2:+44725638 MS.gene034741:CDS
ACATGGTGTGTGGCGAATGG+TGG 0.648790 1.2:+44725695 MS.gene034741:CDS
TACTATCAGAAGAAGTCACG+TGG 0.652788 1.2:+44725857 MS.gene034741:CDS
GTTGGATTGGATCCATGTGT+CGG 0.659166 1.2:-44724799 None:intergenic
GGCGAATGGTGGTTATTCGG+AGG 0.663457 1.2:+44725706 MS.gene034741:CDS
ACTATCAGAAGAAGTCACGT+GGG 0.674383 1.2:+44725858 MS.gene034741:CDS
TAAAGGGCAAACATGGTGTG+TGG 0.677141 1.2:+44725685 MS.gene034741:CDS
AGATAACTGTTTCTGAAACG+GGG 0.677287 1.2:+44725294 MS.gene034741:CDS
AGATTTATTAGTCTCTGACA+CGG 0.680970 1.2:-44725555 None:intergenic
CTATCAGAAGAAGTCACGTG+GGG 0.690379 1.2:+44725859 MS.gene034741:CDS
AGGGTCCTTAGGTCTTAAAG+GGG 0.695922 1.2:-44725417 None:intergenic
TACCAGAATCAACAACACCA+GGG 0.704518 1.2:-44725187 None:intergenic
TAACTGTTTCTGAAACGGGG+TGG 0.710054 1.2:+44725297 MS.gene034741:CDS
AGTAAGGTACCTGTGAGTGG+TGG 0.718492 1.2:+44725641 MS.gene034741:CDS
TCATTGCTATCACCTAACGA+AGG 0.721926 1.2:-44725320 None:intergenic
TATCAGAAGAAGTCACGTGG+GGG 0.754485 1.2:+44725860 MS.gene034741:CDS
AGTATTAGGATTATAACACG+TGG 0.768628 1.2:-44725801 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAATAAAAAAACATTAAGA+GGG - chr1.2:44725439-44725458 None:intergenic 15.0%
!!! TTTTAATGAGAATCAAAAAA+CGG + chr1.2:44725463-44725482 MS.gene034741:CDS 15.0%
!! GCAAATAAAAAAACATTAAG+AGG - chr1.2:44725440-44725459 None:intergenic 20.0%
!! TTTAATGAGAATCAAAAAAC+GGG + chr1.2:44725464-44725483 MS.gene034741:CDS 20.0%
!!! AGATTAAAATTTGTTTGTCT+AGG - chr1.2:44724959-44724978 None:intergenic 20.0%
! ACAATGGTAATTTAGTGAAA+AGG + chr1.2:44725375-44725394 MS.gene034741:CDS 25.0%
! ATAGTAACTATTGAAAGCAA+AGG - chr1.2:44725843-44725862 None:intergenic 25.0%
! CAATGGTAATTTAGTGAAAA+GGG + chr1.2:44725376-44725395 MS.gene034741:CDS 25.0%
! GTGTTATAATCCTAATACTT+TGG + chr1.2:44725805-44725824 MS.gene034741:CDS 25.0%
! GTTAACCATTAAATAAGAAC+CGG - chr1.2:44725096-44725115 None:intergenic 25.0%
! TTATAATCCTAATACTTTGG+AGG + chr1.2:44725808-44725827 MS.gene034741:CDS 25.0%
!! TAAACCATAATTTTTCTCTG+AGG - chr1.2:44725495-44725514 None:intergenic 25.0%
!!! TAAGATAACTGTTTCTGAAA+CGG + chr1.2:44725292-44725311 MS.gene034741:CDS 25.0%
AGTATTAGGATTATAACACG+TGG - chr1.2:44725804-44725823 None:intergenic 30.0%
TTAGCAGCATAAGCAAAAAA+AGG - chr1.2:44725125-44725144 None:intergenic 30.0%
! AGATTTATTAGTCTCTGACA+CGG - chr1.2:44725558-44725577 None:intergenic 30.0%
! TCAAACCGGTTCTTATTTAA+TGG + chr1.2:44725088-44725107 MS.gene034741:CDS 30.0%
!! AAGATAACTGTTTCTGAAAC+GGG + chr1.2:44725293-44725312 MS.gene034741:CDS 30.0%
!!! GTTTGTCTAGGTTTTGTTTT+TGG - chr1.2:44724947-44724966 None:intergenic 30.0%
!!! TTAGTGAAAAGGGTTTTGAA+TGG + chr1.2:44725386-44725405 MS.gene034741:CDS 30.0%
AAAACATTAAGAGGGTCCTT+AGG - chr1.2:44725431-44725450 None:intergenic 35.0%
ATCATATTGAAGTGCAGACA+TGG - chr1.2:44725267-44725286 None:intergenic 35.0%
GACTAATAAATCTTCGACAC+CGG + chr1.2:44725565-44725584 MS.gene034741:CDS 35.0%
TGTAAAGCAGATAGTGCTAT+TGG - chr1.2:44724987-44725006 None:intergenic 35.0%
TGTCAGTGGTTGAGAATAAA+GGG + chr1.2:44725669-44725688 MS.gene034741:CDS 35.0%
TTAGGTGATAGCAATGAGAT+TGG + chr1.2:44725326-44725345 MS.gene034741:CDS 35.0%
TTGAGAATAAAGGGCAAACA+TGG + chr1.2:44725678-44725697 MS.gene034741:CDS 35.0%
! AATAACCGGTTCAACAAGTT+CGG - chr1.2:44725045-44725064 None:intergenic 35.0%
! ATTTTACCCTAGCGAGAAAA+AGG + chr1.2:44725514-44725533 MS.gene034741:CDS 35.0%
! CATAAACCTTTTTCTCGCTA+GGG - chr1.2:44725523-44725542 None:intergenic 35.0%
! TCATAAACCTTTTTCTCGCT+AGG - chr1.2:44725524-44725543 None:intergenic 35.0%
!! ACCATAATTTTTCTCTGAGG+TGG - chr1.2:44725492-44725511 None:intergenic 35.0%
!! AGAAGCATGAACGTTTTTCA+TGG - chr1.2:44724922-44724941 None:intergenic 35.0%
!! AGATAACTGTTTCTGAAACG+GGG + chr1.2:44725294-44725313 MS.gene034741:CDS 35.0%
!!! AAAAGGGTTTTGAATGGAAG+TGG + chr1.2:44725392-44725411 MS.gene034741:CDS 35.0%
!!! AAAGGGTTTTGAATGGAAGT+GGG + chr1.2:44725393-44725412 MS.gene034741:CDS 35.0%
!!! AAGTTCGGTTTTGAATGAAC+CGG - chr1.2:44725030-44725049 None:intergenic 35.0%
!!! CCATAATTTTTCTCTGAGGT+GGG - chr1.2:44725491-44725510 None:intergenic 35.0%
AATGGCTTCTATTTGTGTGG+CGG - chr1.2:44724841-44724860 None:intergenic 40.0%
ACTATCAGAAGAAGTCACGT+GGG + chr1.2:44725858-44725877 MS.gene034741:CDS 40.0%
AGCAATGGCTTCTATTTGTG+TGG - chr1.2:44724844-44724863 None:intergenic 40.0%
AGTGGTTAAGGATGTTGGAT+TGG - chr1.2:44724815-44724834 None:intergenic 40.0%
CAAATAGAAGCCATTGCTGT+CGG + chr1.2:44724846-44724865 MS.gene034741:CDS 40.0%
CCCACCTCAGAGAAAAATTA+TGG + chr1.2:44725488-44725507 MS.gene034741:CDS 40.0%
GTGTCAGTGGTTGAGAATAA+AGG + chr1.2:44725668-44725687 MS.gene034741:CDS 40.0%
TACCAGAATCAACAACACCA+GGG - chr1.2:44725190-44725209 None:intergenic 40.0%
TACTATCAGAAGAAGTCACG+TGG + chr1.2:44725857-44725876 MS.gene034741:CDS 40.0%
TCATTGCTATCACCTAACGA+AGG - chr1.2:44725323-44725342 None:intergenic 40.0%
TTACCAGAATCAACAACACC+AGG - chr1.2:44725191-44725210 None:intergenic 40.0%
! AGCATGAACGTTTTTCATGG+CGG - chr1.2:44724919-44724938 None:intergenic 40.0%
! AGGTAGTTGGTCGTGTTTTT+AGG - chr1.2:44724891-44724910 None:intergenic 40.0%
! GACAATGCTGCTTCTTACAA+TGG + chr1.2:44725359-44725378 MS.gene034741:CDS 40.0%
!! CAAAACCGAACTTGTTGAAC+CGG + chr1.2:44725037-44725056 MS.gene034741:CDS 40.0%
!! GCTTTGTTTAAGCAAAACCC+TGG + chr1.2:44725170-44725189 MS.gene034741:CDS 40.0%
!! GGTAGTTGGTCGTGTTTTTA+GGG - chr1.2:44724890-44724909 None:intergenic 40.0%
!! TCGAGCATCGGTTTAATAAC+CGG - chr1.2:44725059-44725078 None:intergenic 40.0%
AGAGGGTCCTTAGGTCTTAA+AGG - chr1.2:44725422-44725441 None:intergenic 45.0%
AGGGTCCTTAGGTCTTAAAG+GGG - chr1.2:44725420-44725439 None:intergenic 45.0%
ATCAATCCTACACCGACACA+TGG + chr1.2:44724787-44724806 MS.gene034741:CDS 45.0%
ATGGCTTCTATTTGTGTGGC+GGG - chr1.2:44724840-44724859 None:intergenic 45.0%
CTATCAGAAGAAGTCACGTG+GGG + chr1.2:44725859-44725878 MS.gene034741:CDS 45.0%
CTCGAGTTTCTACGTCAAAC+CGG + chr1.2:44725074-44725093 MS.gene034741:CDS 45.0%
GAGGGTCCTTAGGTCTTAAA+GGG - chr1.2:44725421-44725440 None:intergenic 45.0%
GATAGCAATGAGATTGGTGC+TGG + chr1.2:44725332-44725351 MS.gene034741:CDS 45.0%
TAAAGGGCAAACATGGTGTG+TGG + chr1.2:44725685-44725704 MS.gene034741:CDS 45.0%
TAAATCTTCGACACCGGTAG+CGG + chr1.2:44725571-44725590 MS.gene034741:CDS 45.0%
TATCAGAAGAAGTCACGTGG+GGG + chr1.2:44725860-44725879 MS.gene034741:CDS 45.0%
TCTTCTTACCCTACCTCAAC+CGG + chr1.2:44725008-44725027 MS.gene034741:CDS 45.0%
TGAATGAACCGGTTGAGGTA+GGG - chr1.2:44725019-44725038 None:intergenic 45.0%
TGACGTAGAAACTCGAGCAT+CGG - chr1.2:44725071-44725090 None:intergenic 45.0%
TGATTGTGCTCCGATTCAAC+CGG + chr1.2:44725775-44725794 MS.gene034741:CDS 45.0%
TGCAGACATGGCAGCATTAA+CGG - chr1.2:44725255-44725274 None:intergenic 45.0%
TGTGGCGAATGGTGGTTATT+CGG + chr1.2:44725703-44725722 MS.gene034741:CDS 45.0%
TTAGTCTCTGACACGGTCAA+CGG - chr1.2:44725551-44725570 None:intergenic 45.0%
TTGAATGAACCGGTTGAGGT+AGG - chr1.2:44725020-44725039 None:intergenic 45.0%
! GCATGAACGTTTTTCATGGC+GGG - chr1.2:44724918-44724937 None:intergenic 45.0%
! GCATGTGCCTCCAAAGTATT+AGG - chr1.2:44725818-44725837 None:intergenic 45.0%
! GTTGGATTGGATCCATGTGT+CGG - chr1.2:44724802-44724821 None:intergenic 45.0%
! TGTGTCGGTGTAGGATTGAT+CGG - chr1.2:44724787-44724806 None:intergenic 45.0%
!! AACCCTGGTGTTGTTGATTC+TGG + chr1.2:44725185-44725204 MS.gene034741:CDS 45.0%
!! TAACTGTTTCTGAAACGGGG+TGG + chr1.2:44725297-44725316 MS.gene034741:CDS 45.0%
!!! GGTTTTGAATGAACCGGTTG+AGG - chr1.2:44725024-44725043 None:intergenic 45.0%
AACCTCGTTTCCGACAGCAA+TGG - chr1.2:44724859-44724878 None:intergenic 50.0%
ACGCGCTTGATTATGCGTGT+GGG + chr1.2:44725741-44725760 MS.gene034741:CDS 50.0%
CAAACATGGTGTGTGGCGAA+TGG + chr1.2:44725692-44725711 MS.gene034741:CDS 50.0%
CTTGATTATGCGTGTGGGGA+AGG + chr1.2:44725746-44725765 MS.gene034741:CDS 50.0%
GATTGTGCTCCGATTCAACC+GGG + chr1.2:44725776-44725795 MS.gene034741:CDS 50.0%
GGATTATAACACGTGGCACC+CGG - chr1.2:44725797-44725816 None:intergenic 50.0%
TGGCTTCTATTTGTGTGGCG+GGG - chr1.2:44724839-44724858 None:intergenic 50.0%
! AGGAGTAAGGTACCTGTGAG+TGG + chr1.2:44725638-44725657 MS.gene034741:CDS 50.0%
! AGTAAGGTACCTGTGAGTGG+TGG + chr1.2:44725641-44725660 MS.gene034741:CDS 50.0%
! GGGGTAGTGGTTAAGGATGT+TGG - chr1.2:44724820-44724839 None:intergenic 50.0%
! TTGGATCCATGTGTCGGTGT+AGG - chr1.2:44724796-44724815 None:intergenic 50.0%
!! TGGGACCCCTTTAAGACCTA+AGG + chr1.2:44725412-44725431 MS.gene034741:CDS 50.0%
ACATGGTGTGTGGCGAATGG+TGG + chr1.2:44725695-44725714 MS.gene034741:CDS 55.0%
AGCCATTGCTGTCGGAAACG+AGG + chr1.2:44724854-44724873 MS.gene034741:CDS 55.0%
CACGCGCTTGATTATGCGTG+TGG + chr1.2:44725740-44725759 MS.gene034741:CDS 55.0%
CGCGCTTGATTATGCGTGTG+GGG + chr1.2:44725742-44725761 MS.gene034741:CDS 55.0%
GACACATCACCACCACTCAC+AGG - chr1.2:44725653-44725672 None:intergenic 55.0%
GATTATGCGTGTGGGGAAGG+TGG + chr1.2:44725749-44725768 MS.gene034741:CDS 55.0%
GCGGAGGAGAGAAGCTCATT+TGG - chr1.2:44724759-44724778 None:intergenic 55.0%
GGCGAATGGTGGTTATTCGG+AGG + chr1.2:44725706-44725725 MS.gene034741:CDS 55.0%
GTAGGATTGATCGGCTGCAG+CGG - chr1.2:44724778-44724797 None:intergenic 55.0%
TCCATTGGAGACTCCGCTAC+CGG - chr1.2:44725587-44725606 None:intergenic 55.0%
! CTATTTGTGTGGCGGGGTAG+TGG - chr1.2:44724833-44724852 None:intergenic 55.0%
! GAGTGGTGGTGATGTGTCAG+TGG + chr1.2:44725655-44725674 MS.gene034741:CDS 55.0%
!! GGAGGCACGTGTGATTTTGG+TGG + chr1.2:44725881-44725900 MS.gene034741:CDS 55.0%
!!! CGTTTTTCATGGCGGGTACG+AGG - chr1.2:44724911-44724930 None:intergenic 55.0%
CACGTGGCACCCGGTTGAAT+CGG - chr1.2:44725788-44725807 None:intergenic 60.0%
CAGAAGAAGTCACGTGGGGG+AGG + chr1.2:44725863-44725882 MS.gene034741:CDS 60.0%
GAAACGGGGTGGCCTTCGTT+AGG + chr1.2:44725308-44725327 MS.gene034741:CDS 60.0%
GTCTCCAATGGAGTCAGCGC+AGG + chr1.2:44725595-44725614 MS.gene034741:CDS 60.0%
! GTGTGGCGGGGTAGTGGTTA+AGG - chr1.2:44724827-44724846 None:intergenic 60.0%
!! ACCGGTAGCGGAGTCTCCAA+TGG + chr1.2:44725583-44725602 MS.gene034741:CDS 60.0%
!! CATGGCGGGTACGAGGTAGT+TGG - chr1.2:44724904-44724923 None:intergenic 60.0%
!! GGGGGAGGCACGTGTGATTT+TGG + chr1.2:44725878-44725897 MS.gene034741:CDS 60.0%
GGATTGATCGGCTGCAGCGG+AGG - chr1.2:44724775-44724794 None:intergenic 65.0%
GGCGGGTGTAGGGAGGAGTA+AGG + chr1.2:44725625-44725644 MS.gene034741:CDS 65.0%
!! AGGCTCCAGTGGCGGGTGTA+GGG + chr1.2:44725615-44725634 MS.gene034741:CDS 65.0%
!! GGAGCCTGCGCTGACTCCAT+TGG - chr1.2:44725602-44725621 None:intergenic 65.0%
CTCCTCCCTACACCCGCCAC+TGG - chr1.2:44725623-44725642 None:intergenic 70.0%
GGAGTCAGCGCAGGCTCCAG+TGG + chr1.2:44725604-44725623 MS.gene034741:CDS 70.0%
GTCAGCGCAGGCTCCAGTGG+CGG + chr1.2:44725607-44725626 MS.gene034741:CDS 70.0%
TCAGCGCAGGCTCCAGTGGC+GGG + chr1.2:44725608-44725627 MS.gene034741:CDS 70.0%
!! CAGGCTCCAGTGGCGGGTGT+AGG + chr1.2:44725614-44725633 MS.gene034741:CDS 70.0%
!! CTCCAGTGGCGGGTGTAGGG+AGG + chr1.2:44725618-44725637 MS.gene034741:CDS 70.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 44724753 44725932 44724753 ID=MS.gene034741
chr1.2 mRNA 44724753 44725932 44724753 ID=MS.gene034741.t1;Parent=MS.gene034741
chr1.2 exon 44724753 44725932 44724753 ID=MS.gene034741.t1.exon1;Parent=MS.gene034741.t1
chr1.2 CDS 44724753 44725932 44724753 ID=cds.MS.gene034741.t1;Parent=MS.gene034741.t1
Gene Sequence

>MS.gene034741

ATGCCAAATGAGCTTCTCTCCTCCGCTGCAGCCGATCAATCCTACACCGACACATGGATCCAATCCAACATCCTTAACCACTACCCCGCCACACAAATAGAAGCCATTGCTGTCGGAAACGAGGTTTTCGTAGACCCTAAAAACACGACCAACTACCTCGTACCCGCCATGAAAAACGTTCATGCTTCTCTCCAAAAACAAAACCTAGACAAACAAATTTTAATCTCTTCTCCAATAGCACTATCTGCTTTACAATCTTCTTACCCTACCTCAACCGGTTCATTCAAAACCGAACTTGTTGAACCGGTTATTAAACCGATGCTCGAGTTTCTACGTCAAACCGGTTCTTATTTAATGGTTAACGCTTATCCTTTTTTTGCTTATGCTGCTAACTCAGACACAATCTCATTAGATTATGCTTTGTTTAAGCAAAACCCTGGTGTTGTTGATTCTGGTAATCATTTGAAATATGATAATCTTTTCGACGCTCAAATCGACGCCGTTAATGCTGCCATGTCTGCACTTCAATATGATGATGTTAAGATAACTGTTTCTGAAACGGGGTGGCCTTCGTTAGGTGATAGCAATGAGATTGGTGCTGGTCAAGACAATGCTGCTTCTTACAATGGTAATTTAGTGAAAAGGGTTTTGAATGGAAGTGGGACCCCTTTAAGACCTAAGGACCCTCTTAATGTTTTTTTATTTGCTCTTTTTAATGAGAATCAAAAAACGGGTCCCACCTCAGAGAAAAATTATGGTTTATTTTACCCTAGCGAGAAAAAGGTTTATGATATTCCGTTGACCGTGTCAGAGACTAATAAATCTTCGACACCGGTAGCGGAGTCTCCAATGGAGTCAGCGCAGGCTCCAGTGGCGGGTGTAGGGAGGAGTAAGGTACCTGTGAGTGGTGGTGATGTGTCAGTGGTTGAGAATAAAGGGCAAACATGGTGTGTGGCGAATGGTGGTTATTCGGAGGAGAAGTTGAAACACGCGCTTGATTATGCGTGTGGGGAAGGTGGTGCTGATTGTGCTCCGATTCAACCGGGTGCCACGTGTTATAATCCTAATACTTTGGAGGCACATGCTTCCTTTGCTTTCAATAGTTACTATCAGAAGAAGTCACGTGGGGGAGGCACGTGTGATTTTGGTGGTGCTGCTTATGTTGTTACACAAGCTCCTA
Protein sequence

>MS.gene034741.t1

MPNELLSSAAADQSYTDTWIQSNILNHYPATQIEAIAVGNEVFVDPKNTTNYLVPAMKNVHASLQKQNLDKQILISSPIALSALQSSYPTSTGSFKTELVEPVIKPMLEFLRQTGSYLMVNAYPFFAYAANSDTISLDYALFKQNPGVVDSGNHLKYDNLFDAQIDAVNAAMSALQYDDVKITVSETGWPSLGDSNEIGAGQDNAASYNGNLVKRVLNGSGTPLRPKDPLNVFLFALFNENQKTGPTSEKNYGLFYPSEKKVYDIPLTVSETNKSSTPVAESPMESAQAPVAGVGRSKVPVSGGDVSVVENKGQTWCVANGGYSEEKLKHALDYACGEGGADCAPIQPGATCYNPNTLEAHASFAFNSYYQKKSRGGGTCDFGGAAYVVTQAP