Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017120.t1 | XP_003617439.2 | 95.7 | 677 | 27 | 2 | 1 | 676 | 1 | 676 | 0.00E+00 | 1278.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017120.t1 | Q9SHY2 | 76.6 | 663 | 151 | 3 | 19 | 678 | 22 | 683 | 1.3e-301 | 1036.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017120.t1 | G7KD70 | 95.7 | 677 | 27 | 2 | 1 | 676 | 1 | 676 | 0.0e+00 | 1278.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene45566 | MS.gene017120 | PPI |
| MS.gene37726 | MS.gene017120 | PPI |
| MS.gene017120 | MS.gene57831 | PPI |
| MS.gene05216 | MS.gene017120 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017120.t1 | MTR_5g091600 | 95.716 | 677 | 27 | 2 | 1 | 676 | 1 | 676 | 0.0 | 1281 |
| MS.gene017120.t1 | MTR_3g063490 | 85.838 | 692 | 84 | 3 | 1 | 678 | 1 | 692 | 0.0 | 1181 |
| MS.gene017120.t1 | MTR_3g063520 | 87.719 | 684 | 76 | 2 | 1 | 676 | 1 | 684 | 0.0 | 1158 |
| MS.gene017120.t1 | MTR_6g077870 | 71.640 | 677 | 182 | 5 | 6 | 676 | 34 | 706 | 0.0 | 994 |
| MS.gene017120.t1 | MTR_6g077870 | 71.585 | 549 | 149 | 4 | 131 | 676 | 1 | 545 | 0.0 | 813 |
| MS.gene017120.t1 | MTR_7g028250 | 57.951 | 654 | 264 | 6 | 27 | 673 | 30 | 679 | 0.0 | 785 |
| MS.gene017120.t1 | MTR_3g092090 | 55.338 | 665 | 286 | 5 | 6 | 667 | 7 | 663 | 0.0 | 766 |
| MS.gene017120.t1 | MTR_3g092090 | 55.199 | 654 | 282 | 5 | 6 | 656 | 7 | 652 | 0.0 | 749 |
| MS.gene017120.t1 | MTR_0312s0020 | 51.560 | 673 | 319 | 3 | 1 | 670 | 4 | 672 | 0.0 | 730 |
| MS.gene017120.t1 | MTR_1g007580 | 51.940 | 670 | 307 | 4 | 4 | 670 | 15 | 672 | 0.0 | 730 |
| MS.gene017120.t1 | MTR_1g007540 | 51.560 | 673 | 319 | 3 | 1 | 670 | 4 | 672 | 0.0 | 730 |
| MS.gene017120.t1 | MTR_1g077840 | 51.502 | 666 | 311 | 6 | 8 | 669 | 22 | 679 | 0.0 | 714 |
| MS.gene017120.t1 | MTR_5g091615 | 92.994 | 157 | 11 | 0 | 519 | 675 | 59 | 215 | 5.67e-92 | 288 |
| MS.gene017120.t1 | MTR_5g091615 | 75.862 | 58 | 13 | 1 | 1 | 58 | 1 | 57 | 2.86e-19 | 89.4 |
| MS.gene017120.t1 | MTR_1626s0010 | 51.681 | 238 | 112 | 1 | 210 | 447 | 1 | 235 | 1.76e-82 | 261 |
| MS.gene017120.t1 | MTR_0312s0050 | 49.558 | 113 | 49 | 1 | 8 | 120 | 19 | 123 | 6.66e-33 | 123 |
| MS.gene017120.t1 | MTR_2g083230 | 86.957 | 46 | 6 | 0 | 122 | 167 | 34 | 79 | 2.45e-18 | 80.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017120.t1 | AT1G65730 | 74.891 | 685 | 163 | 5 | 1 | 678 | 1 | 683 | 0.0 | 1058 |
| MS.gene017120.t1 | AT3G17650 | 71.946 | 663 | 176 | 4 | 22 | 676 | 46 | 706 | 0.0 | 959 |
| MS.gene017120.t1 | AT3G17650 | 71.946 | 663 | 176 | 4 | 22 | 676 | 46 | 706 | 0.0 | 959 |
| MS.gene017120.t1 | AT1G48370 | 71.536 | 664 | 178 | 4 | 22 | 676 | 55 | 716 | 0.0 | 948 |
| MS.gene017120.t1 | AT3G27020 | 57.227 | 678 | 269 | 7 | 9 | 673 | 7 | 676 | 0.0 | 784 |
| MS.gene017120.t1 | AT1G48370 | 70.090 | 555 | 155 | 4 | 131 | 676 | 1 | 553 | 0.0 | 771 |
| MS.gene017120.t1 | AT5G53550 | 55.852 | 675 | 282 | 6 | 1 | 668 | 4 | 669 | 0.0 | 763 |
| MS.gene017120.t1 | AT5G53550 | 55.852 | 675 | 282 | 6 | 1 | 668 | 4 | 669 | 0.0 | 763 |
| MS.gene017120.t1 | AT5G53550 | 55.852 | 675 | 282 | 6 | 1 | 668 | 4 | 669 | 0.0 | 763 |
| MS.gene017120.t1 | AT5G53550 | 55.852 | 675 | 282 | 6 | 1 | 668 | 4 | 669 | 0.0 | 763 |
| MS.gene017120.t1 | AT5G53550 | 55.852 | 675 | 282 | 6 | 1 | 668 | 4 | 669 | 0.0 | 763 |
| MS.gene017120.t1 | AT5G41000 | 54.776 | 670 | 293 | 6 | 4 | 667 | 2 | 667 | 0.0 | 755 |
| MS.gene017120.t1 | AT5G24380 | 53.303 | 666 | 299 | 5 | 6 | 667 | 3 | 660 | 0.0 | 749 |
| MS.gene017120.t1 | AT4G24120 | 53.254 | 676 | 297 | 5 | 1 | 669 | 9 | 672 | 0.0 | 739 |
| MS.gene017120.t1 | AT5G41000 | 53.064 | 669 | 281 | 7 | 4 | 667 | 2 | 642 | 0.0 | 716 |
| MS.gene017120.t1 | AT5G53550 | 58.480 | 513 | 207 | 2 | 156 | 668 | 1 | 507 | 0.0 | 615 |
| MS.gene017120.t1 | AT5G41000 | 55.285 | 492 | 217 | 3 | 178 | 667 | 1 | 491 | 0.0 | 578 |
| MS.gene017120.t1 | AT5G45450 | 65.421 | 214 | 68 | 1 | 463 | 676 | 1 | 208 | 5.84e-94 | 290 |
Find 153 sgRNAs with CRISPR-Local
Find 271 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATTTGTTGTTAGCTTTCT+TGG | 0.055871 | 5.1:+73161165 | MS.gene017120:CDS |
| GTTCTTTGCATAACTCTTAA+AGG | 0.161384 | 5.1:+73162596 | MS.gene017120:CDS |
| GGTGATGGTCTATTCAATTT+TGG | 0.178911 | 5.1:+73162569 | MS.gene017120:CDS |
| GATGAGATTTCCACTGAAAA+AGG | 0.208952 | 5.1:+73159386 | MS.gene017120:CDS |
| AATGTTTCGGCTGGGTTGTT+AGG | 0.215147 | 5.1:+73159545 | MS.gene017120:CDS |
| TGATTTGCGGAGATGGAATT+TGG | 0.227884 | 5.1:+73163509 | MS.gene017120:CDS |
| GAAGCTTGATATTGTTTATT+TGG | 0.238786 | 5.1:+73163431 | MS.gene017120:CDS |
| TACATGGTCTTCAAGGTTAC+AGG | 0.266757 | 5.1:+73162240 | MS.gene017120:CDS |
| ATGTTTGTGAGCCAAGTTAT+TGG | 0.272519 | 5.1:+73163088 | MS.gene017120:CDS |
| TTTGGAGCAGCTGTTGCTTC+TGG | 0.279659 | 5.1:+73163484 | MS.gene017120:CDS |
| TACTTGCTTCTTTGCTAGTT+TGG | 0.284398 | 5.1:-73161685 | None:intergenic |
| CCGAACAATATTAATAATTA+TGG | 0.291212 | 5.1:-73163308 | None:intergenic |
| TATTCCTTCTTTGAATGTTT+CGG | 0.296053 | 5.1:+73159532 | MS.gene017120:CDS |
| AGCGAAATATTGGTTATATA+TGG | 0.303147 | 5.1:-73162122 | None:intergenic |
| TCATTGGCAGTGCCAGCTTC+TGG | 0.308809 | 5.1:-73161105 | None:intergenic |
| GACACCACATGCTGCTAAAC+TGG | 0.314803 | 5.1:-73162984 | None:intergenic |
| ACCAATCAACAGCGAAATAT+TGG | 0.316315 | 5.1:-73162132 | None:intergenic |
| TTTACAAACTTTCCCACATT+TGG | 0.322898 | 5.1:+73161789 | MS.gene017120:CDS |
| GTATTCTCCTGTCTGGTAAA+AGG | 0.329015 | 5.1:-73159626 | None:intergenic |
| TTATTTGGCAGAAGCTTGAT+AGG | 0.342034 | 5.1:+73163446 | MS.gene017120:CDS |
| ACCAATATTTCGCTGTTGAT+TGG | 0.354272 | 5.1:+73162131 | MS.gene017120:CDS |
| AAGTAGCTTCCAATGTAAAA+TGG | 0.358086 | 5.1:-73163388 | None:intergenic |
| TCACGTCGTCGATGAGGTTC+TGG | 0.358748 | 5.1:-73159338 | None:intergenic |
| ATAGGCATAGCAATGATTCT+TGG | 0.363000 | 5.1:+73162548 | MS.gene017120:CDS |
| TGGTTATTCTACCATGCATT+TGG | 0.366728 | 5.1:+73163148 | MS.gene017120:CDS |
| CTTCTCCTTTAGCTTCTTGT+GGG | 0.366991 | 5.1:+73161725 | MS.gene017120:CDS |
| AGGGCCAAGGCTGATGCATT+TGG | 0.370325 | 5.1:+73163466 | MS.gene017120:CDS |
| GGGTTTGGTAGCTACTTGTT+TGG | 0.371080 | 5.1:+73161054 | MS.gene017120:CDS |
| GGCAGAAACAGGTTACTGTT+AGG | 0.378300 | 5.1:+73159435 | MS.gene017120:CDS |
| CCTTCTTTGAATGTTTCGGC+TGG | 0.378910 | 5.1:+73159536 | MS.gene017120:CDS |
| TGATTGGTGGAGTTCTTTCA+TGG | 0.381134 | 5.1:+73162147 | MS.gene017120:CDS |
| TACCATGCATTTGGTACTCT+TGG | 0.383561 | 5.1:+73163157 | MS.gene017120:CDS |
| AAGGAAAATCGGTTCCTTCA+TGG | 0.390439 | 5.1:+73159414 | MS.gene017120:CDS |
| TGGCTCACAAACATGGATTT+CGG | 0.390640 | 5.1:-73163079 | None:intergenic |
| GCCAATGATGTTAAGAGTCT+TGG | 0.398551 | 5.1:+73161120 | MS.gene017120:CDS |
| CTGCTTTCTTTGAGATCAGC+AGG | 0.407509 | 5.1:-73162215 | None:intergenic |
| TCTTGTGGGGTTTCTTCCAA+TGG | 0.410444 | 5.1:+73161739 | MS.gene017120:CDS |
| TTCAGTGGTTCCACTTAGAA+AGG | 0.412142 | 5.1:+73161194 | MS.gene017120:CDS |
| GATGTTAAGAGTCTTGGTTT+AGG | 0.418370 | 5.1:+73161126 | MS.gene017120:CDS |
| GGTTCCTTCATGGCAGAAAC+AGG | 0.418491 | 5.1:+73159424 | MS.gene017120:CDS |
| GATTGGTGGAGTTCTTTCAT+GGG | 0.427764 | 5.1:+73162148 | MS.gene017120:CDS |
| GACAAGAATTTCATGCAAAT+AGG | 0.427809 | 5.1:-73163574 | None:intergenic |
| AGTCACTTACTTCCTTTGAT+AGG | 0.427904 | 5.1:-73161820 | None:intergenic |
| CCATAATTATTAATATTGTT+CGG | 0.429626 | 5.1:+73163308 | MS.gene017120:CDS |
| GTAGGTGGGAGAGGAGCATT+TGG | 0.431255 | 5.1:-73162668 | None:intergenic |
| GTTGCTTCTGGTTTGATTTG+CGG | 0.432992 | 5.1:+73163496 | MS.gene017120:CDS |
| TTTACTTGTGTAGGTGGGTT+TGG | 0.439530 | 5.1:+73161039 | MS.gene017120:intron |
| TCTTCTCCTTTAGCTTCTTG+TGG | 0.441527 | 5.1:+73161724 | MS.gene017120:CDS |
| AAAAGGGTTTGAAGGAAAAT+CGG | 0.442446 | 5.1:+73159403 | MS.gene017120:CDS |
| ATGTTTCGGCTGGGTTGTTA+GGG | 0.444080 | 5.1:+73159546 | MS.gene017120:CDS |
| ACCAAGACTCTTAACATCAT+TGG | 0.446254 | 5.1:-73161121 | None:intergenic |
| CGATAGCAGTTCCAATAACT+TGG | 0.447827 | 5.1:-73163099 | None:intergenic |
| TTCACTGCTGGTGATGCTTG+TGG | 0.449951 | 5.1:+73161765 | MS.gene017120:CDS |
| CTCATGCAAGACTTCAAAAC+AGG | 0.450675 | 5.1:+73163037 | MS.gene017120:CDS |
| TGCTCCAAATGCATCAGCCT+TGG | 0.453111 | 5.1:-73163470 | None:intergenic |
| TATCGAAACATGGCAATACT+AGG | 0.453894 | 5.1:+73163220 | MS.gene017120:CDS |
| TTCACTATCGGTGCTTGGAC+AGG | 0.455104 | 5.1:+73162941 | MS.gene017120:CDS |
| GGTGTCATGTGGCCTCTCAT+TGG | 0.456041 | 5.1:+73162170 | MS.gene017120:CDS |
| TTAAGAGTCTTGGTTTAGGA+TGG | 0.456468 | 5.1:+73161130 | MS.gene017120:CDS |
| TCTGGTTTGATTTGCGGAGA+TGG | 0.456514 | 5.1:+73163502 | MS.gene017120:CDS |
| CAAGTATATTCCTGTTCCTA+TGG | 0.457463 | 5.1:+73163354 | MS.gene017120:CDS |
| AGCAGCTAATGCTAGGTTGA+TGG | 0.462834 | 5.1:+73163600 | MS.gene017120:CDS |
| CTCAAAGAAAGCAGCTTACA+TGG | 0.464152 | 5.1:+73162224 | MS.gene017120:CDS |
| AGCAGCTTACATGGTCTTCA+AGG | 0.465668 | 5.1:+73162233 | MS.gene017120:CDS |
| TTTGGTACTCTTGGTCAACC+TGG | 0.466335 | 5.1:+73163166 | MS.gene017120:CDS |
| ACCAGCTTTCTCAAGCAACT+TGG | 0.467323 | 5.1:-73159591 | None:intergenic |
| AGGAGGGGATTTGATCTTTG+AGG | 0.467620 | 5.1:-73162727 | None:intergenic |
| CAAGTTATTGGAACTGCTAT+CGG | 0.474537 | 5.1:+73163100 | MS.gene017120:CDS |
| ATGAAGCTGAATCTCACTAC+TGG | 0.474985 | 5.1:+73159506 | MS.gene017120:CDS |
| ATCGCCATAGCCATAGGAAC+AGG | 0.477409 | 5.1:-73163364 | None:intergenic |
| TTTCGATAAACGAGTGCATA+AGG | 0.482550 | 5.1:-73163205 | None:intergenic |
| AATAACAGTATTCTCCTGTC+TGG | 0.483024 | 5.1:-73159633 | None:intergenic |
| CCATCTTCACTATCGGTGCT+TGG | 0.483234 | 5.1:+73162936 | MS.gene017120:CDS |
| CTTCTTTGAATGTTTCGGCT+GGG | 0.483708 | 5.1:+73159537 | MS.gene017120:CDS |
| CCCTCCTGGTTTGCTATCGC+AGG | 0.488906 | 5.1:+73162743 | MS.gene017120:CDS |
| ACTTGTGTTGTTGCTGCTAG+TGG | 0.489925 | 5.1:+73159659 | MS.gene017120:CDS |
| AGTTAGTGTACCTTTCTAAG+TGG | 0.497051 | 5.1:-73161204 | None:intergenic |
| AATATTGTTCGGTACTTCGT+TGG | 0.499440 | 5.1:+73163319 | MS.gene017120:CDS |
| GCAGAAACAGGTTACTGTTA+GGG | 0.499595 | 5.1:+73159436 | MS.gene017120:CDS |
| AATATTTCGCTGTTGATTGG+TGG | 0.504823 | 5.1:+73162134 | MS.gene017120:CDS |
| TAAACGAGTGCATAAGGTGC+AGG | 0.507587 | 5.1:-73163199 | None:intergenic |
| TTTGCTATTGATATGTGTGT+TGG | 0.507636 | 5.1:+73163409 | MS.gene017120:CDS |
| TTCTTTCATGGGGTGTCATG+TGG | 0.512338 | 5.1:+73162159 | MS.gene017120:CDS |
| ACTTTAGCTGGTGGAAAATG+TGG | 0.515525 | 5.1:-73162805 | None:intergenic |
| TCAAAGATCAAATCCCCTCC+TGG | 0.519522 | 5.1:+73162729 | MS.gene017120:CDS |
| CATAGGAACAGGAATATACT+TGG | 0.521944 | 5.1:-73163353 | None:intergenic |
| TGTCTAGAGCAGCTAATGCT+AGG | 0.526789 | 5.1:+73163593 | MS.gene017120:CDS |
| ATAGCCTGCGATAGCAAACC+AGG | 0.526898 | 5.1:-73162747 | None:intergenic |
| GCAAAACAAATTCCAGAAGC+TGG | 0.528010 | 5.1:+73161093 | MS.gene017120:CDS |
| AATAACTTGGCTCACAAACA+TGG | 0.530485 | 5.1:-73163086 | None:intergenic |
| ATAGGCTTCTAGACCAAATG+TGG | 0.534074 | 5.1:-73161802 | None:intergenic |
| AAAGAAGCAAGTAAAAGCAC+TGG | 0.538820 | 5.1:+73161695 | MS.gene017120:CDS |
| CCAAGCACCGATAGTGAAGA+TGG | 0.542033 | 5.1:-73162936 | None:intergenic |
| ATTCAGCTTCATCACAATGA+AGG | 0.542122 | 5.1:-73159495 | None:intergenic |
| AATGAAAGTGTAGGTGGGAG+AGG | 0.542352 | 5.1:-73162677 | None:intergenic |
| ACCAAGTTGCTTGAGAAAGC+TGG | 0.544740 | 5.1:+73159590 | MS.gene017120:CDS |
| TATTCCTGTTCCTATGGCTA+TGG | 0.547446 | 5.1:+73163360 | MS.gene017120:CDS |
| GTAACCTGTTTCTGCCATGA+AGG | 0.548353 | 5.1:-73159428 | None:intergenic |
| TGATGTGATACCACTTTAGC+TGG | 0.550885 | 5.1:-73162817 | None:intergenic |
| ATGGCTGTGGACTAACAGAT+TGG | 0.552312 | 5.1:+73162885 | MS.gene017120:CDS |
| GGTTCTTCTTTGTCAAGACA+TGG | 0.553064 | 5.1:+73159567 | MS.gene017120:CDS |
| CTTTAGCTGGTGGAAAATGT+GGG | 0.554313 | 5.1:-73162804 | None:intergenic |
| GAAACCCCACAAGAAGCTAA+AGG | 0.558484 | 5.1:-73161730 | None:intergenic |
| TGAGCTGTTGCAGTACCACT+TGG | 0.560291 | 5.1:-73161630 | None:intergenic |
| ATGGCAATACTAGGTGTGGA+TGG | 0.562386 | 5.1:+73163229 | MS.gene017120:CDS |
| TGGTCCCTTGCATCGACCTA+CGG | 0.564629 | 5.1:+73162905 | MS.gene017120:CDS |
| TATTTGGCAGAAGCTTGATA+GGG | 0.566643 | 5.1:+73163447 | MS.gene017120:CDS |
| AATCTCATCGAGTTGTTCAT+CGG | 0.567170 | 5.1:-73159372 | None:intergenic |
| AGACAAAGTAGCACAGTCTG+AGG | 0.568806 | 5.1:+73162643 | MS.gene017120:CDS |
| AATGGTATCGCCATAGCCAT+AGG | 0.572462 | 5.1:-73163370 | None:intergenic |
| AAATTAGCCATCTTCACTAT+CGG | 0.574958 | 5.1:+73162929 | MS.gene017120:CDS |
| GCAAGAGCAAGAAAAGAGCT+AGG | 0.577753 | 5.1:-73163538 | None:intergenic |
| CTCATCGAGTTGTTCATCGG+AGG | 0.577930 | 5.1:-73159369 | None:intergenic |
| GCAGAAGCTTGATAGGGCCA+AGG | 0.581499 | 5.1:+73163453 | MS.gene017120:CDS |
| TCATCGAATGAAAGTGTAGG+TGG | 0.582413 | 5.1:-73162683 | None:intergenic |
| ATCTGTTAGTCCACAGCCAT+AGG | 0.582868 | 5.1:-73162882 | None:intergenic |
| CAAAACAGGTTACATGACAC+TGG | 0.583625 | 5.1:+73163051 | MS.gene017120:CDS |
| TCAACGTCACGTCGTCGATG+AGG | 0.588481 | 5.1:-73159344 | None:intergenic |
| AAACATGGCAATACTAGGTG+TGG | 0.591588 | 5.1:+73163225 | MS.gene017120:CDS |
| AAGAATTTCATGCAAATAGG+TGG | 0.591699 | 5.1:-73163571 | None:intergenic |
| CCAGCCGAAACATTCAAAGA+AGG | 0.594215 | 5.1:-73159536 | None:intergenic |
| TGCACTCGTTTATCGAAACA+TGG | 0.595881 | 5.1:+73163210 | MS.gene017120:CDS |
| TTCTCCTTTAGCTTCTTGTG+GGG | 0.598215 | 5.1:+73161726 | MS.gene017120:CDS |
| ATAGCAATGATTCTTGGTGA+TGG | 0.599500 | 5.1:+73162554 | MS.gene017120:CDS |
| TGCTTTCTTTGAGATCAGCA+GGG | 0.603921 | 5.1:-73162214 | None:intergenic |
| ATTCGATGACAAGCGCAGAA+CGG | 0.605807 | 5.1:+73162697 | MS.gene017120:CDS |
| GGTGCAGGGTATGCTGAACC+AGG | 0.606714 | 5.1:-73163184 | None:intergenic |
| TTGGTCTAGAAGCCTATCAA+AGG | 0.609519 | 5.1:+73161808 | MS.gene017120:CDS |
| GACCAAGAGTACCAAATGCA+TGG | 0.613241 | 5.1:-73163159 | None:intergenic |
| ATTGGTGGAGTTCTTTCATG+GGG | 0.613889 | 5.1:+73162149 | MS.gene017120:CDS |
| AGTTGCTTGAGAAAGCTGGT+TGG | 0.620575 | 5.1:+73159594 | MS.gene017120:CDS |
| CACATGCTGCTAAACTGGCT+AGG | 0.627857 | 5.1:-73162979 | None:intergenic |
| TGAAGCTGAATCTCACTACT+GGG | 0.630097 | 5.1:+73159507 | MS.gene017120:CDS |
| CTGCGATAGCAAACCAGGAG+GGG | 0.633433 | 5.1:-73162742 | None:intergenic |
| GGTGCTTGGACAGGAGCCAA+CGG | 0.634839 | 5.1:+73162950 | MS.gene017120:CDS |
| ACATGGTCTTCAAGGTTACA+GGG | 0.635841 | 5.1:+73162241 | MS.gene017120:CDS |
| AAGAAGCAAGTAAAAGCACT+GGG | 0.641434 | 5.1:+73161696 | MS.gene017120:CDS |
| TTTAGCTGGTGGAAAATGTG+GGG | 0.643964 | 5.1:-73162803 | None:intergenic |
| AAACGAGTGCATAAGGTGCA+GGG | 0.645258 | 5.1:-73163198 | None:intergenic |
| TTGTCATCGAATGAAAGTGT+AGG | 0.645823 | 5.1:-73162686 | None:intergenic |
| CATCGAATGAAAGTGTAGGT+GGG | 0.652819 | 5.1:-73162682 | None:intergenic |
| CCTGCGATAGCAAACCAGGA+GGG | 0.658243 | 5.1:-73162743 | None:intergenic |
| AAAATATGCTGCAAAGTACG+AGG | 0.669730 | 5.1:-73163276 | None:intergenic |
| CTAGCCAGTTTAGCAGCATG+TGG | 0.673936 | 5.1:+73162980 | MS.gene017120:CDS |
| TAGGCTTCTAGACCAAATGT+GGG | 0.679352 | 5.1:-73161801 | None:intergenic |
| TTAGCTGGTGGAAAATGTGG+GGG | 0.686845 | 5.1:-73162802 | None:intergenic |
| ACTGGCTAGGATACCGCCGT+TGG | 0.687737 | 5.1:-73162966 | None:intergenic |
| TAGAATAACCAGAAAACACA+AGG | 0.690587 | 5.1:-73163136 | None:intergenic |
| TGTGATACCACTTTAGCTGG+TGG | 0.692393 | 5.1:-73162814 | None:intergenic |
| TTCAGATTGACATATCCAAG+TGG | 0.693932 | 5.1:+73161615 | MS.gene017120:CDS |
| GCTAGTGGAATTGCATTCAG+CGG | 0.695424 | 5.1:+73159674 | MS.gene017120:CDS |
| GCCTGCGATAGCAAACCAGG+AGG | 0.703548 | 5.1:-73162744 | None:intergenic |
| GCTTGGACAGGAGCCAACGG+CGG | 0.709931 | 5.1:+73162953 | MS.gene017120:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAATTCAAATAAATAAAA+AGG | - | chr5.1:73161335-73161354 | None:intergenic | 10.0% |
| !! | TAAATGTTAAATAAATGAAA+AGG | - | chr5.1:73162030-73162049 | None:intergenic | 10.0% |
| !!! | TATTTATTTGAATTTTGTAT+TGG | + | chr5.1:73161338-73161357 | MS.gene017120:intron | 10.0% |
| !! | ATTAAAAAAGGATTTAACAA+AGG | + | chr5.1:73161867-73161886 | MS.gene017120:intron | 15.0% |
| !! | CCATAATTATTAATATTGTT+CGG | + | chr5.1:73163308-73163327 | MS.gene017120:CDS | 15.0% |
| !! | TATTTATTTATGTACATAAC+AGG | + | chr5.1:73162051-73162070 | MS.gene017120:intron | 15.0% |
| !! | TTCCATCATTAATAAAATAT+AGG | - | chr5.1:73161848-73161867 | None:intergenic | 15.0% |
| !! | TTTAACACAAAACATAAAAA+GGG | - | chr5.1:73159720-73159739 | None:intergenic | 15.0% |
| !!! | AGTATATTTTGAAATTGATA+TGG | + | chr5.1:73162349-73162368 | MS.gene017120:intron | 15.0% |
| !!! | ATTAATGATGGAATTAAAAA+AGG | + | chr5.1:73161855-73161874 | MS.gene017120:intron | 15.0% |
| !!! | TGAATCAATTTTTAAAACAT+GGG | + | chr5.1:73161539-73161558 | MS.gene017120:intron | 15.0% |
| !!! | TTGAATCAATTTTTAAAACA+TGG | + | chr5.1:73161538-73161557 | MS.gene017120:intron | 15.0% |
| !! | ATTAGAAATTTAAACATGAC+AGG | + | chr5.1:73160696-73160715 | MS.gene017120:intron | 20.0% |
| !! | ATTTGTGATTTGAATTGAAT+TGG | + | chr5.1:73159759-73159778 | MS.gene017120:intron | 20.0% |
| !! | CCGAACAATATTAATAATTA+TGG | - | chr5.1:73163311-73163330 | None:intergenic | 20.0% |
| !! | CTTTAACACAAAACATAAAA+AGG | - | chr5.1:73159721-73159740 | None:intergenic | 20.0% |
| !! | TCAAAATATACTTACAAAAG+TGG | - | chr5.1:73162341-73162360 | None:intergenic | 20.0% |
| !! | TTTGTGATTTGAATTGAATT+GGG | + | chr5.1:73159760-73159779 | MS.gene017120:intron | 20.0% |
| !!! | ATTGTATTCTTTTAAACTAC+AGG | + | chr5.1:73162520-73162539 | MS.gene017120:intron | 20.0% |
| !!! | ATTTTAAAAATTGAGTCAGA+TGG | + | chr5.1:73161404-73161423 | MS.gene017120:intron | 20.0% |
| !!! | TAATCAAACAATGTATTGAT+AGG | + | chr5.1:73161239-73161258 | MS.gene017120:intron | 20.0% |
| ! | CAACGTAAAACATAGTTAAT+TGG | + | chr5.1:73162398-73162417 | MS.gene017120:intron | 25.0% |
| ! | GAAAAATAGTAGTTTCTCAT+TGG | + | chr5.1:73162371-73162390 | MS.gene017120:intron | 25.0% |
| ! | GAAGCTTGATATTGTTTATT+TGG | + | chr5.1:73163431-73163450 | MS.gene017120:CDS | 25.0% |
| ! | GATTATGATAGCTTAAGAAA+AGG | - | chr5.1:73160662-73160681 | None:intergenic | 25.0% |
| ! | TAAAACAATTGAACATGACT+TGG | + | chr5.1:73161497-73161516 | MS.gene017120:intron | 25.0% |
| ! | TATCAATAGATCTTAACTGA+AGG | + | chr5.1:73160617-73160636 | MS.gene017120:intron | 25.0% |
| ! | TATTCCTTCTTTGAATGTTT+CGG | + | chr5.1:73159532-73159551 | MS.gene017120:CDS | 25.0% |
| ! | TTAGGAGTCAACTTATTTAA+AGG | + | chr5.1:73159996-73160015 | MS.gene017120:intron | 25.0% |
| ! | TTGTGATTTGAATTGAATTG+GGG | + | chr5.1:73159761-73159780 | MS.gene017120:intron | 25.0% |
| !! | AGCGAAATATTGGTTATATA+TGG | - | chr5.1:73162125-73162144 | None:intergenic | 25.0% |
| !! | CGCCTATATTTTATTAATGA+TGG | + | chr5.1:73161843-73161862 | MS.gene017120:intron | 25.0% |
| !! | TTTAAACTACAGGTTTTCAT+AGG | + | chr5.1:73162530-73162549 | MS.gene017120:intron | 25.0% |
| !!! | AAAATCTTGTGTTTTTGTGT+TGG | + | chr5.1:73159907-73159926 | MS.gene017120:intron | 25.0% |
| !!! | AGTTAATTTTGAAGCATGAT+TGG | + | chr5.1:73160022-73160041 | MS.gene017120:intron | 25.0% |
| !!! | ATTTTAAGGTATGACAAAGT+CGG | - | chr5.1:73161286-73161305 | None:intergenic | 25.0% |
| !!! | TGTTTTAAATTGATTGAACC+AGG | - | chr5.1:73161484-73161503 | None:intergenic | 25.0% |
| AAAAGGGTTTGAAGGAAAAT+CGG | + | chr5.1:73159403-73159422 | MS.gene017120:CDS | 30.0% | |
| AAATTAGCCATCTTCACTAT+CGG | + | chr5.1:73162929-73162948 | MS.gene017120:CDS | 30.0% | |
| AACCTCTATGTTCTCAATTA+TGG | + | chr5.1:73161931-73161950 | MS.gene017120:intron | 30.0% | |
| AAGAATTTCATGCAAATAGG+TGG | - | chr5.1:73163574-73163593 | None:intergenic | 30.0% | |
| AAGTAGCTTCCAATGTAAAA+TGG | - | chr5.1:73163391-73163410 | None:intergenic | 30.0% | |
| AATTGAGAACATAGAGGTTT+CGG | - | chr5.1:73161930-73161949 | None:intergenic | 30.0% | |
| ACAAGTACAAAACTGGAATT+TGG | + | chr5.1:73162427-73162446 | MS.gene017120:intron | 30.0% | |
| AGCAAAACATTTCTCAAGAA+GGG | - | chr5.1:73160810-73160829 | None:intergenic | 30.0% | |
| ATGAGATTTCCACTGAAAAA+GGG | + | chr5.1:73159387-73159406 | MS.gene017120:CDS | 30.0% | |
| CAGAGTTCAATTAGAAATTG+AGG | - | chr5.1:73160934-73160953 | None:intergenic | 30.0% | |
| GACAAGAATTTCATGCAAAT+AGG | - | chr5.1:73163577-73163596 | None:intergenic | 30.0% | |
| GATTGAAACAAGTACAAAAC+TGG | + | chr5.1:73162420-73162439 | MS.gene017120:intron | 30.0% | |
| GATTTAACAAAGGATGCATT+TGG | + | chr5.1:73161877-73161896 | MS.gene017120:intron | 30.0% | |
| GCAATTACTTCAATTCAATG+TGG | + | chr5.1:73160886-73160905 | MS.gene017120:intron | 30.0% | |
| GTTAGTAATACGATAGAGTT+TGG | + | chr5.1:73160744-73160763 | MS.gene017120:intron | 30.0% | |
| GTTCTTTGCATAACTCTTAA+AGG | + | chr5.1:73162596-73162615 | MS.gene017120:CDS | 30.0% | |
| TAGAATAACCAGAAAACACA+AGG | - | chr5.1:73163139-73163158 | None:intergenic | 30.0% | |
| TAGCAAAACATTTCTCAAGA+AGG | - | chr5.1:73160811-73160830 | None:intergenic | 30.0% | |
| TTTACAAACTTTCCCACATT+TGG | + | chr5.1:73161789-73161808 | MS.gene017120:CDS | 30.0% | |
| TTTCTAATTGAACTCTGAGT+TGG | + | chr5.1:73160937-73160956 | MS.gene017120:intron | 30.0% | |
| TTTCTTGGTTAGTGTATCAT+CGG | + | chr5.1:73159857-73159876 | MS.gene017120:intron | 30.0% | |
| ! | AACAGTTTTCATACATCAGA+AGG | + | chr5.1:73161660-73161679 | MS.gene017120:CDS | 30.0% |
| !! | CTATTTGTTGTTAGCTTTCT+TGG | + | chr5.1:73161165-73161184 | MS.gene017120:CDS | 30.0% |
| !! | TGGTTGGTAATGTATTCTTT+AGG | + | chr5.1:73162487-73162506 | MS.gene017120:intron | 30.0% |
| !! | TTTGCTATTGATATGTGTGT+TGG | + | chr5.1:73163409-73163428 | MS.gene017120:CDS | 30.0% |
| !!! | GGAATTTGTTTTGCAATAGT+TGG | - | chr5.1:73161087-73161106 | None:intergenic | 30.0% |
| AAAAAGGCCCATATTTGTAG+TGG | - | chr5.1:73161319-73161338 | None:intergenic | 35.0% | |
| AAAATATGCTGCAAAGTACG+AGG | - | chr5.1:73163279-73163298 | None:intergenic | 35.0% | |
| AAAATTATGAAAGTCCGCTG+AGG | - | chr5.1:73160860-73160879 | None:intergenic | 35.0% | |
| AATAACAGTATTCTCCTGTC+TGG | - | chr5.1:73159636-73159655 | None:intergenic | 35.0% | |
| AATAACTTGGCTCACAAACA+TGG | - | chr5.1:73163089-73163108 | None:intergenic | 35.0% | |
| AATCAAACTGTAGACATTGC+TGG | - | chr5.1:73161451-73161470 | None:intergenic | 35.0% | |
| AATTCAATGTGGATTCTCAG+TGG | + | chr5.1:73160897-73160916 | MS.gene017120:intron | 35.0% | |
| ACCAAGACTCTTAACATCAT+TGG | - | chr5.1:73161124-73161143 | None:intergenic | 35.0% | |
| ACCAATATTTCGCTGTTGAT+TGG | + | chr5.1:73162131-73162150 | MS.gene017120:CDS | 35.0% | |
| ACCAATCAACAGCGAAATAT+TGG | - | chr5.1:73162135-73162154 | None:intergenic | 35.0% | |
| AGTCACTTACTTCCTTTGAT+AGG | - | chr5.1:73161823-73161842 | None:intergenic | 35.0% | |
| AGTTAGTGTACCTTTCTAAG+TGG | - | chr5.1:73161207-73161226 | None:intergenic | 35.0% | |
| ATAGCAATGATTCTTGGTGA+TGG | + | chr5.1:73162554-73162573 | MS.gene017120:CDS | 35.0% | |
| ATAGGCATAGCAATGATTCT+TGG | + | chr5.1:73162548-73162567 | MS.gene017120:CDS | 35.0% | |
| ATGTTTGTGAGCCAAGTTAT+TGG | + | chr5.1:73163088-73163107 | MS.gene017120:CDS | 35.0% | |
| ATTCAGCTTCATCACAATGA+AGG | - | chr5.1:73159498-73159517 | None:intergenic | 35.0% | |
| CAAGTATATTCCTGTTCCTA+TGG | + | chr5.1:73163354-73163373 | MS.gene017120:CDS | 35.0% | |
| CAAGTTATTGGAACTGCTAT+CGG | + | chr5.1:73163100-73163119 | MS.gene017120:CDS | 35.0% | |
| CAATGTCTACAGTTTGATTG+CGG | + | chr5.1:73161452-73161471 | MS.gene017120:intron | 35.0% | |
| CACCATAATTGAGAACATAG+AGG | - | chr5.1:73161936-73161955 | None:intergenic | 35.0% | |
| CATAGGAACAGGAATATACT+TGG | - | chr5.1:73163356-73163375 | None:intergenic | 35.0% | |
| GATGAGATTTCCACTGAAAA+AGG | + | chr5.1:73159386-73159405 | MS.gene017120:CDS | 35.0% | |
| GATGTTAAGAGTCTTGGTTT+AGG | + | chr5.1:73161126-73161145 | MS.gene017120:CDS | 35.0% | |
| TACTTGCTTCTTTGCTAGTT+TGG | - | chr5.1:73161688-73161707 | None:intergenic | 35.0% | |
| TATCGAAACATGGCAATACT+AGG | + | chr5.1:73163220-73163239 | MS.gene017120:CDS | 35.0% | |
| TATTTGGCAGAAGCTTGATA+GGG | + | chr5.1:73163447-73163466 | MS.gene017120:CDS | 35.0% | |
| TGAATTGAATTGGGGTTACT+GGG | + | chr5.1:73159769-73159788 | MS.gene017120:intron | 35.0% | |
| TGGTTATTCTACCATGCATT+TGG | + | chr5.1:73163148-73163167 | MS.gene017120:CDS | 35.0% | |
| TTAAGAGTCTTGGTTTAGGA+TGG | + | chr5.1:73161130-73161149 | MS.gene017120:CDS | 35.0% | |
| TTATTTGGCAGAAGCTTGAT+AGG | + | chr5.1:73163446-73163465 | MS.gene017120:CDS | 35.0% | |
| TTCACATGGTTTACTTGTGT+AGG | + | chr5.1:73161030-73161049 | MS.gene017120:intron | 35.0% | |
| TTCAGATTGACATATCCAAG+TGG | + | chr5.1:73161615-73161634 | MS.gene017120:CDS | 35.0% | |
| TTCTTGGTTAGTGTATCATC+GGG | + | chr5.1:73159858-73159877 | MS.gene017120:intron | 35.0% | |
| TTGAATTGAATTGGGGTTAC+TGG | + | chr5.1:73159768-73159787 | MS.gene017120:intron | 35.0% | |
| TTGCTGACAAATCTTTCACA+TGG | + | chr5.1:73161016-73161035 | MS.gene017120:intron | 35.0% | |
| TTTCGATAAACGAGTGCATA+AGG | - | chr5.1:73163208-73163227 | None:intergenic | 35.0% | |
| ! | AAAGAAGCAAGTAAAAGCAC+TGG | + | chr5.1:73161695-73161714 | MS.gene017120:CDS | 35.0% |
| ! | AATATTTCGCTGTTGATTGG+TGG | + | chr5.1:73162134-73162153 | MS.gene017120:CDS | 35.0% |
| ! | AATCTCATCGAGTTGTTCAT+CGG | - | chr5.1:73159375-73159394 | None:intergenic | 35.0% |
| ! | ATGGCGATACCATTTTACAT+TGG | + | chr5.1:73163379-73163398 | MS.gene017120:CDS | 35.0% |
| ! | ATTTTTCTGCTACCTATGTG+GGG | + | chr5.1:73162084-73162103 | MS.gene017120:CDS | 35.0% |
| ! | GATTTTTCTGCTACCTATGT+GGG | + | chr5.1:73162083-73162102 | MS.gene017120:CDS | 35.0% |
| ! | TAATCAACCTTTTACCAGAC+AGG | + | chr5.1:73159619-73159638 | MS.gene017120:CDS | 35.0% |
| ! | TGATTTTTCTGCTACCTATG+TGG | + | chr5.1:73162082-73162101 | MS.gene017120:CDS | 35.0% |
| ! | TTGCTTTGCATGTGTTTTCT+TGG | + | chr5.1:73159842-73159861 | MS.gene017120:intron | 35.0% |
| ! | TTGTCATCGAATGAAAGTGT+AGG | - | chr5.1:73162689-73162708 | None:intergenic | 35.0% |
| ! | TTTTCAACCAGCAACAGAAA+GGG | - | chr5.1:73159944-73159963 | None:intergenic | 35.0% |
| !! | AAGAAGCAAGTAAAAGCACT+GGG | + | chr5.1:73161696-73161715 | MS.gene017120:CDS | 35.0% |
| !! | ATCTTGTGTTTTTGTGTTGG+TGG | + | chr5.1:73159910-73159929 | MS.gene017120:intron | 35.0% |
| !! | GGTGATGGTCTATTCAATTT+TGG | + | chr5.1:73162569-73162588 | MS.gene017120:CDS | 35.0% |
| !!! | GATATGGGTTTCTGGTTTTT+TGG | + | chr5.1:73159794-73159813 | MS.gene017120:intron | 35.0% |
| !!! | TAGATCTTTTTCGATGTGAC+TGG | + | chr5.1:73162467-73162486 | MS.gene017120:intron | 35.0% |
| AAACATGGCAATACTAGGTG+TGG | + | chr5.1:73163225-73163244 | MS.gene017120:CDS | 40.0% | |
| AACCTGCACCACTACAAATA+TGG | + | chr5.1:73161308-73161327 | MS.gene017120:intron | 40.0% | |
| ACATGGTCTTCAAGGTTACA+GGG | + | chr5.1:73162241-73162260 | MS.gene017120:CDS | 40.0% | |
| ACATGGTTTACTTGTGTAGG+TGG | + | chr5.1:73161033-73161052 | MS.gene017120:intron | 40.0% | |
| ACCTGCACCACTACAAATAT+GGG | + | chr5.1:73161309-73161328 | MS.gene017120:intron | 40.0% | |
| ACTTTAGCTGGTGGAAAATG+TGG | - | chr5.1:73162808-73162827 | None:intergenic | 40.0% | |
| AGAAGGGTAAAAGAGCAAGT+TGG | - | chr5.1:73160794-73160813 | None:intergenic | 40.0% | |
| ATAGGCTTCTAGACCAAATG+TGG | - | chr5.1:73161805-73161824 | None:intergenic | 40.0% | |
| ATGAAGCTGAATCTCACTAC+TGG | + | chr5.1:73159506-73159525 | MS.gene017120:CDS | 40.0% | |
| ATTGGTGGAGTTCTTTCATG+GGG | + | chr5.1:73162149-73162168 | MS.gene017120:CDS | 40.0% | |
| CAAAACAGGTTACATGACAC+TGG | + | chr5.1:73163051-73163070 | MS.gene017120:CDS | 40.0% | |
| CATGGTTTACTTGTGTAGGT+GGG | + | chr5.1:73161034-73161053 | MS.gene017120:intron | 40.0% | |
| CGATAGCAGTTCCAATAACT+TGG | - | chr5.1:73163102-73163121 | None:intergenic | 40.0% | |
| CTCAAAGAAAGCAGCTTACA+TGG | + | chr5.1:73162224-73162243 | MS.gene017120:CDS | 40.0% | |
| CTCATGCAAGACTTCAAAAC+AGG | + | chr5.1:73163037-73163056 | MS.gene017120:CDS | 40.0% | |
| CTTCTTTGAATGTTTCGGCT+GGG | + | chr5.1:73159537-73159556 | MS.gene017120:CDS | 40.0% | |
| CTTTAGCTGGTGGAAAATGT+GGG | - | chr5.1:73162807-73162826 | None:intergenic | 40.0% | |
| GATTGGTGGAGTTCTTTCAT+GGG | + | chr5.1:73162148-73162167 | MS.gene017120:CDS | 40.0% | |
| GCAAAACAAATTCCAGAAGC+TGG | + | chr5.1:73161093-73161112 | MS.gene017120:CDS | 40.0% | |
| GCAGAAACAGGTTACTGTTA+GGG | + | chr5.1:73159436-73159455 | MS.gene017120:CDS | 40.0% | |
| GCCAATGATGTTAAGAGTCT+TGG | + | chr5.1:73161120-73161139 | MS.gene017120:CDS | 40.0% | |
| GGTTCTTCTTTGTCAAGACA+TGG | + | chr5.1:73159567-73159586 | MS.gene017120:CDS | 40.0% | |
| GTATTCTCCTGTCTGGTAAA+AGG | - | chr5.1:73159629-73159648 | None:intergenic | 40.0% | |
| TACATGGTCTTCAAGGTTAC+AGG | + | chr5.1:73162240-73162259 | MS.gene017120:CDS | 40.0% | |
| TACCATGCATTTGGTACTCT+TGG | + | chr5.1:73163157-73163176 | MS.gene017120:CDS | 40.0% | |
| TAGGCTTCTAGACCAAATGT+GGG | - | chr5.1:73161804-73161823 | None:intergenic | 40.0% | |
| TATTCCTGTTCCTATGGCTA+TGG | + | chr5.1:73163360-73163379 | MS.gene017120:CDS | 40.0% | |
| TCCACTGAAAAAGGGTTTGA+AGG | + | chr5.1:73159395-73159414 | MS.gene017120:CDS | 40.0% | |
| TGAAGCTGAATCTCACTACT+GGG | + | chr5.1:73159507-73159526 | MS.gene017120:CDS | 40.0% | |
| TGATGTGATACCACTTTAGC+TGG | - | chr5.1:73162820-73162839 | None:intergenic | 40.0% | |
| TGATTCAAACATCAGCAGTG+AGG | - | chr5.1:73161526-73161545 | None:intergenic | 40.0% | |
| TGATTGGTGGAGTTCTTTCA+TGG | + | chr5.1:73162147-73162166 | MS.gene017120:CDS | 40.0% | |
| TGCACTCGTTTATCGAAACA+TGG | + | chr5.1:73163210-73163229 | MS.gene017120:CDS | 40.0% | |
| TGGCTCACAAACATGGATTT+CGG | - | chr5.1:73163082-73163101 | None:intergenic | 40.0% | |
| TTCAGTGGTTCCACTTAGAA+AGG | + | chr5.1:73161194-73161213 | MS.gene017120:CDS | 40.0% | |
| TTGGTCTAGAAGCCTATCAA+AGG | + | chr5.1:73161808-73161827 | MS.gene017120:CDS | 40.0% | |
| TTGTGACTCCTATTGACAGT+GGG | - | chr5.1:73159889-73159908 | None:intergenic | 40.0% | |
| TTTAGCTGGTGGAAAATGTG+GGG | - | chr5.1:73162806-73162825 | None:intergenic | 40.0% | |
| TTTGTGACTCCTATTGACAG+TGG | - | chr5.1:73159890-73159909 | None:intergenic | 40.0% | |
| ! | AAGGAAAATCGGTTCCTTCA+TGG | + | chr5.1:73159414-73159433 | MS.gene017120:CDS | 40.0% |
| ! | ACATTTTCCACCAGCTAAAG+TGG | + | chr5.1:73162807-73162826 | MS.gene017120:CDS | 40.0% |
| ! | CAAAGTACGAGGCAGTTTTT+CGG | - | chr5.1:73163268-73163287 | None:intergenic | 40.0% |
| ! | CATCGAATGAAAGTGTAGGT+GGG | - | chr5.1:73162685-73162704 | None:intergenic | 40.0% |
| ! | CTTCTCCTTTAGCTTCTTGT+GGG | + | chr5.1:73161725-73161744 | MS.gene017120:CDS | 40.0% |
| ! | CTTTCTTGGTCTCTTTTCAG+TGG | + | chr5.1:73161179-73161198 | MS.gene017120:CDS | 40.0% |
| ! | CTTTTCAACCAGCAACAGAA+AGG | - | chr5.1:73159945-73159964 | None:intergenic | 40.0% |
| ! | GAAGATGGCTAATTTTCCGT+AGG | - | chr5.1:73162924-73162943 | None:intergenic | 40.0% |
| ! | GTGGTGCAGGTTACATTTTA+AGG | - | chr5.1:73161300-73161319 | None:intergenic | 40.0% |
| ! | TCATCGAATGAAAGTGTAGG+TGG | - | chr5.1:73162686-73162705 | None:intergenic | 40.0% |
| ! | TCTTCTCCTTTAGCTTCTTG+TGG | + | chr5.1:73161724-73161743 | MS.gene017120:CDS | 40.0% |
| ! | TGATTTGCGGAGATGGAATT+TGG | + | chr5.1:73163509-73163528 | MS.gene017120:CDS | 40.0% |
| ! | TTCCAATGGTTTTTCACTGC+TGG | + | chr5.1:73161753-73161772 | MS.gene017120:CDS | 40.0% |
| ! | TTCTCCTTTAGCTTCTTGTG+GGG | + | chr5.1:73161726-73161745 | MS.gene017120:CDS | 40.0% |
| ! | TTGTATCGCCTTGTGTTTTC+TGG | + | chr5.1:73163128-73163147 | MS.gene017120:CDS | 40.0% |
| ! | TTTACTTGTGTAGGTGGGTT+TGG | + | chr5.1:73161039-73161058 | MS.gene017120:intron | 40.0% |
| ! | TTTTTCTGCTACCTATGTGG+GGG | + | chr5.1:73162085-73162104 | MS.gene017120:CDS | 40.0% |
| !! | CCTCTCATTGGTGCTAAAAA+AGG | + | chr5.1:73162182-73162201 | MS.gene017120:CDS | 40.0% |
| !! | CTAGCTTTTTGCAATGCCTA+TGG | + | chr5.1:73162866-73162885 | MS.gene017120:CDS | 40.0% |
| !! | GTTGCTTCTGGTTTGATTTG+CGG | + | chr5.1:73163496-73163515 | MS.gene017120:CDS | 40.0% |
| !! | TGCTTTCTTTGAGATCAGCA+GGG | - | chr5.1:73162217-73162236 | None:intergenic | 40.0% |
| !! | TTGGTGCTAAAAAAGGAGAC+TGG | + | chr5.1:73162189-73162208 | MS.gene017120:CDS | 40.0% |
| !!! | CCTTTTTTAGCACCAATGAG+AGG | - | chr5.1:73162185-73162204 | None:intergenic | 40.0% |
| !!! | TCCTTCAAACCCTTTTTCAG+TGG | - | chr5.1:73159399-73159418 | None:intergenic | 40.0% |
| !!! | TCTTTTTCGATGTGACTGGT+TGG | + | chr5.1:73162471-73162490 | MS.gene017120:intron | 40.0% |
| AAACGAGTGCATAAGGTGCA+GGG | - | chr5.1:73163201-73163220 | None:intergenic | 45.0% | |
| AATGGTATCGCCATAGCCAT+AGG | - | chr5.1:73163373-73163392 | None:intergenic | 45.0% | |
| AATGTTTCGGCTGGGTTGTT+AGG | + | chr5.1:73159545-73159564 | MS.gene017120:CDS | 45.0% | |
| ACCAAGTTGCTTGAGAAAGC+TGG | + | chr5.1:73159590-73159609 | MS.gene017120:CDS | 45.0% | |
| ACCAGCTTTCTCAAGCAACT+TGG | - | chr5.1:73159594-73159613 | None:intergenic | 45.0% | |
| AGACAAAGTAGCACAGTCTG+AGG | + | chr5.1:73162643-73162662 | MS.gene017120:CDS | 45.0% | |
| AGCAGCTTACATGGTCTTCA+AGG | + | chr5.1:73162233-73162252 | MS.gene017120:CDS | 45.0% | |
| AGGAGGGGATTTGATCTTTG+AGG | - | chr5.1:73162730-73162749 | None:intergenic | 45.0% | |
| AGTTGCTTGAGAAAGCTGGT+TGG | + | chr5.1:73159594-73159613 | MS.gene017120:CDS | 45.0% | |
| ATCTGTTAGTCCACAGCCAT+AGG | - | chr5.1:73162885-73162904 | None:intergenic | 45.0% | |
| ATGGCAATACTAGGTGTGGA+TGG | + | chr5.1:73163229-73163248 | MS.gene017120:CDS | 45.0% | |
| ATGTTTCGGCTGGGTTGTTA+GGG | + | chr5.1:73159546-73159565 | MS.gene017120:CDS | 45.0% | |
| ATTCGATGACAAGCGCAGAA+CGG | + | chr5.1:73162697-73162716 | MS.gene017120:CDS | 45.0% | |
| CACCAGCAGTGAAAAACCAT+TGG | - | chr5.1:73161758-73161777 | None:intergenic | 45.0% | |
| CCAGCCGAAACATTCAAAGA+AGG | - | chr5.1:73159539-73159558 | None:intergenic | 45.0% | |
| CCTTCTTTGAATGTTTCGGC+TGG | + | chr5.1:73159536-73159555 | MS.gene017120:CDS | 45.0% | |
| GAAACCCCACAAGAAGCTAA+AGG | - | chr5.1:73161733-73161752 | None:intergenic | 45.0% | |
| GCAAGAGCAAGAAAAGAGCT+AGG | - | chr5.1:73163541-73163560 | None:intergenic | 45.0% | |
| GCATTGCAAAAAGCTAGTGC+GGG | - | chr5.1:73162863-73162882 | None:intergenic | 45.0% | |
| GCTAGTGGAATTGCATTCAG+CGG | + | chr5.1:73159674-73159693 | MS.gene017120:CDS | 45.0% | |
| GGCAGAAACAGGTTACTGTT+AGG | + | chr5.1:73159435-73159454 | MS.gene017120:CDS | 45.0% | |
| GGCATTGCAAAAAGCTAGTG+CGG | - | chr5.1:73162864-73162883 | None:intergenic | 45.0% | |
| TAAACGAGTGCATAAGGTGC+AGG | - | chr5.1:73163202-73163221 | None:intergenic | 45.0% | |
| TCAAAGATCAAATCCCCTCC+TGG | + | chr5.1:73162729-73162748 | MS.gene017120:CDS | 45.0% | |
| TCTTGTGGGGTTTCTTCCAA+TGG | + | chr5.1:73161739-73161758 | MS.gene017120:CDS | 45.0% | |
| TGGATTCTCAGTGGAATGAG+TGG | + | chr5.1:73160906-73160925 | MS.gene017120:intron | 45.0% | |
| TGGTTAGTGTATCATCGGGT+GGG | + | chr5.1:73159862-73159881 | MS.gene017120:intron | 45.0% | |
| TGTGATACCACTTTAGCTGG+TGG | - | chr5.1:73162817-73162836 | None:intergenic | 45.0% | |
| TTAGCTGGTGGAAAATGTGG+GGG | - | chr5.1:73162805-73162824 | None:intergenic | 45.0% | |
| TTGGTTAGTGTATCATCGGG+TGG | + | chr5.1:73159861-73159880 | MS.gene017120:intron | 45.0% | |
| TTTGGTACTCTTGGTCAACC+TGG | + | chr5.1:73163166-73163185 | MS.gene017120:CDS | 45.0% | |
| ! | AATGAAAGTGTAGGTGGGAG+AGG | - | chr5.1:73162680-73162699 | None:intergenic | 45.0% |
| ! | ACTTGTGTTGTTGCTGCTAG+TGG | + | chr5.1:73159659-73159678 | MS.gene017120:CDS | 45.0% |
| ! | AGCAGCTAATGCTAGGTTGA+TGG | + | chr5.1:73163600-73163619 | MS.gene017120:CDS | 45.0% |
| ! | AGCTCTTTTCTTGCTCTTGC+TGG | + | chr5.1:73163541-73163560 | MS.gene017120:CDS | 45.0% |
| ! | ATGGCTGTGGACTAACAGAT+TGG | + | chr5.1:73162885-73162904 | MS.gene017120:CDS | 45.0% |
| ! | ATTTTCCGTAGGTCGATGCA+AGG | - | chr5.1:73162913-73162932 | None:intergenic | 45.0% |
| ! | GGGTTTGGTAGCTACTTGTT+TGG | + | chr5.1:73161054-73161073 | MS.gene017120:CDS | 45.0% |
| ! | TGTCTAGAGCAGCTAATGCT+AGG | + | chr5.1:73163593-73163612 | MS.gene017120:CDS | 45.0% |
| ! | TTCTTTCATGGGGTGTCATG+TGG | + | chr5.1:73162159-73162178 | MS.gene017120:CDS | 45.0% |
| ! | TTTTCCGTAGGTCGATGCAA+GGG | - | chr5.1:73162912-73162931 | None:intergenic | 45.0% |
| ! | TTTTGCAATGCCTATGGCTG+TGG | + | chr5.1:73162872-73162891 | MS.gene017120:CDS | 45.0% |
| !! | ACTGGGTTGATATGGGTTTC+TGG | + | chr5.1:73159786-73159805 | MS.gene017120:intron | 45.0% |
| !! | CTGCTTTCTTTGAGATCAGC+AGG | - | chr5.1:73162218-73162237 | None:intergenic | 45.0% |
| !! | GACCAAGAGTACCAAATGCA+TGG | - | chr5.1:73163162-73163181 | None:intergenic | 45.0% |
| !! | GTAACCTGTTTCTGCCATGA+AGG | - | chr5.1:73159431-73159450 | None:intergenic | 45.0% |
| !! | TCTGGTTTGATTTGCGGAGA+TGG | + | chr5.1:73163502-73163521 | MS.gene017120:CDS | 45.0% |
| !! | TGGGGTTACTGGGTTGATAT+GGG | + | chr5.1:73159779-73159798 | MS.gene017120:intron | 45.0% |
| !! | TTGGGGTTACTGGGTTGATA+TGG | + | chr5.1:73159778-73159797 | MS.gene017120:intron | 45.0% |
| !!! | AATTTACTTTTAATTTAATT+AGG | + | chr5.1:73159978-73159997 | MS.gene017120:intron | 5.0% |
| !!! | TTTTTATTTATTTAAATTGT+AGG | + | chr5.1:73162288-73162307 | MS.gene017120:intron | 5.0% |
| ACCAGCAACAGAAAGGGTGA+AGG | - | chr5.1:73159938-73159957 | None:intergenic | 50.0% | |
| ATAGCCTGCGATAGCAAACC+AGG | - | chr5.1:73162750-73162769 | None:intergenic | 50.0% | |
| ATCGCCATAGCCATAGGAAC+AGG | - | chr5.1:73163367-73163386 | None:intergenic | 50.0% | |
| CACATGCTGCTAAACTGGCT+AGG | - | chr5.1:73162982-73163001 | None:intergenic | 50.0% | |
| CCAGCAACAGAAAGGGTGAA+GGG | - | chr5.1:73159937-73159956 | None:intergenic | 50.0% | |
| CTAGCCAGTTTAGCAGCATG+TGG | + | chr5.1:73162980-73162999 | MS.gene017120:CDS | 50.0% | |
| GACACCACATGCTGCTAAAC+TGG | - | chr5.1:73162987-73163006 | None:intergenic | 50.0% | |
| GCCCATATTTGTAGTGGTGC+AGG | - | chr5.1:73161313-73161332 | None:intergenic | 50.0% | |
| GGTTCCTTCATGGCAGAAAC+AGG | + | chr5.1:73159424-73159443 | MS.gene017120:CDS | 50.0% | |
| GTGCTAGTAGTCTACCTCAG+CGG | + | chr5.1:73160843-73160862 | MS.gene017120:intron | 50.0% | |
| GTTTGATTGCGGTTTCGTCC+TGG | + | chr5.1:73161463-73161482 | MS.gene017120:intron | 50.0% | |
| TATCATCCCAACCCCCACAT+AGG | - | chr5.1:73162099-73162118 | None:intergenic | 50.0% | |
| TGAGCTGTTGCAGTACCACT+TGG | - | chr5.1:73161633-73161652 | None:intergenic | 50.0% | |
| TGCTCCAAATGCATCAGCCT+TGG | - | chr5.1:73163473-73163492 | None:intergenic | 50.0% | |
| ! | CCATCTTCACTATCGGTGCT+TGG | + | chr5.1:73162936-73162955 | MS.gene017120:CDS | 50.0% |
| ! | CTCATCGAGTTGTTCATCGG+AGG | - | chr5.1:73159372-73159391 | None:intergenic | 50.0% |
| ! | TTCACTATCGGTGCTTGGAC+AGG | + | chr5.1:73162941-73162960 | MS.gene017120:CDS | 50.0% |
| ! | TTCACTGCTGGTGATGCTTG+TGG | + | chr5.1:73161765-73161784 | MS.gene017120:CDS | 50.0% |
| ! | TTTGGAGCAGCTGTTGCTTC+TGG | + | chr5.1:73163484-73163503 | MS.gene017120:CDS | 50.0% |
| !! | CCAAGCACCGATAGTGAAGA+TGG | - | chr5.1:73162939-73162958 | None:intergenic | 50.0% |
| AGGGCCAAGGCTGATGCATT+TGG | + | chr5.1:73163466-73163485 | MS.gene017120:CDS | 55.0% | |
| CCCTTCACCCTTTCTGTTGC+TGG | + | chr5.1:73159934-73159953 | MS.gene017120:intron | 55.0% | |
| CCTGCGATAGCAAACCAGGA+GGG | - | chr5.1:73162746-73162765 | None:intergenic | 55.0% | |
| CTGCGATAGCAAACCAGGAG+GGG | - | chr5.1:73162745-73162764 | None:intergenic | 55.0% | |
| CTGCTACCTATGTGGGGGTT+GGG | + | chr5.1:73162090-73162109 | MS.gene017120:CDS | 55.0% | |
| CTGGTGGAAAATGTGGGGGA+TGG | - | chr5.1:73162801-73162820 | None:intergenic | 55.0% | |
| GCAGAAGCTTGATAGGGCCA+AGG | + | chr5.1:73163453-73163472 | MS.gene017120:CDS | 55.0% | |
| TCAACGTCACGTCGTCGATG+AGG | - | chr5.1:73159347-73159366 | None:intergenic | 55.0% | |
| TCACGTCGTCGATGAGGTTC+TGG | - | chr5.1:73159341-73159360 | None:intergenic | 55.0% | |
| TCATTGGCAGTGCCAGCTTC+TGG | - | chr5.1:73161108-73161127 | None:intergenic | 55.0% | |
| TCTGCTACCTATGTGGGGGT+TGG | + | chr5.1:73162089-73162108 | MS.gene017120:CDS | 55.0% | |
| ! | GGTGTCATGTGGCCTCTCAT+TGG | + | chr5.1:73162170-73162189 | MS.gene017120:CDS | 55.0% |
| ! | TGGTCCCTTGCATCGACCTA+CGG | + | chr5.1:73162905-73162924 | MS.gene017120:CDS | 55.0% |
| !! | GTAGGTGGGAGAGGAGCATT+TGG | - | chr5.1:73162671-73162690 | None:intergenic | 55.0% |
| ACTGGCTAGGATACCGCCGT+TGG | - | chr5.1:73162969-73162988 | None:intergenic | 60.0% | |
| GCCTGCGATAGCAAACCAGG+AGG | - | chr5.1:73162747-73162766 | None:intergenic | 60.0% | |
| GGGTGGGTCCCACTGTCAAT+AGG | + | chr5.1:73159878-73159897 | MS.gene017120:intron | 60.0% | |
| GGTGCAGGGTATGCTGAACC+AGG | - | chr5.1:73163187-73163206 | None:intergenic | 60.0% | |
| GGTGCTTGGACAGGAGCCAA+CGG | + | chr5.1:73162950-73162969 | MS.gene017120:CDS | 60.0% | |
| !! | CCCTCCTGGTTTGCTATCGC+AGG | + | chr5.1:73162743-73162762 | MS.gene017120:CDS | 60.0% |
| GCTTGGACAGGAGCCAACGG+CGG | + | chr5.1:73162953-73162972 | MS.gene017120:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 73159332 | 73163630 | 73159332 | ID=MS.gene017120 |
| chr5.1 | mRNA | 73159332 | 73163630 | 73159332 | ID=MS.gene017120.t1;Parent=MS.gene017120 |
| chr5.1 | exon | 73159332 | 73159695 | 73159332 | ID=MS.gene017120.t1.exon1;Parent=MS.gene017120.t1 |
| chr5.1 | CDS | 73159332 | 73159695 | 73159332 | ID=cds.MS.gene017120.t1;Parent=MS.gene017120.t1 |
| chr5.1 | exon | 73161052 | 73161215 | 73161052 | ID=MS.gene017120.t1.exon2;Parent=MS.gene017120.t1 |
| chr5.1 | CDS | 73161052 | 73161215 | 73161052 | ID=cds.MS.gene017120.t1;Parent=MS.gene017120.t1 |
| chr5.1 | exon | 73161600 | 73161832 | 73161600 | ID=MS.gene017120.t1.exon3;Parent=MS.gene017120.t1 |
| chr5.1 | CDS | 73161600 | 73161832 | 73161600 | ID=cds.MS.gene017120.t1;Parent=MS.gene017120.t1 |
| chr5.1 | exon | 73162073 | 73162262 | 73162073 | ID=MS.gene017120.t1.exon4;Parent=MS.gene017120.t1 |
| chr5.1 | CDS | 73162073 | 73162262 | 73162073 | ID=cds.MS.gene017120.t1;Parent=MS.gene017120.t1 |
| chr5.1 | exon | 73162542 | 73163630 | 73162542 | ID=MS.gene017120.t1.exon5;Parent=MS.gene017120.t1 |
| chr5.1 | CDS | 73162542 | 73163630 | 73162542 | ID=cds.MS.gene017120.t1;Parent=MS.gene017120.t1 |
| Gene Sequence |
| Protein sequence |
