Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57831.t1 | XP_003620154.1 | 95.8 | 712 | 26 | 1 | 1 | 708 | 1 | 712 | 0.00E+00 | 1357 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57831.t1 | Q6R3K4 | 75.0 | 664 | 158 | 3 | 51 | 706 | 57 | 720 | 1.8e-298 | 1026.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57831.t1 | G7KKB8 | 95.8 | 712 | 26 | 1 | 1 | 708 | 1 | 712 | 0.0e+00 | 1357.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene008380 | MS.gene57831 | PPI |
| MS.gene049639 | MS.gene57831 | PPI |
| MS.gene017121 | MS.gene57831 | PPI |
| MS.gene55668 | MS.gene57831 | PPI |
| MS.gene049642 | MS.gene57831 | PPI |
| MS.gene05062 | MS.gene57831 | PPI |
| MS.gene05072 | MS.gene57831 | PPI |
| MS.gene57831 | MS.gene05066 | PPI |
| MS.gene017120 | MS.gene57831 | PPI |
| MS.gene05063 | MS.gene57831 | PPI |
| MS.gene05068 | MS.gene57831 | PPI |
| MS.gene030050 | MS.gene57831 | PPI |
| MS.gene049640 | MS.gene57831 | PPI |
| MS.gene57831 | MS.gene049646 | PPI |
| MS.gene008379 | MS.gene57831 | PPI |
| MS.gene038353 | MS.gene57831 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57831.t1 | MTR_6g077870 | 97.191 | 712 | 16 | 2 | 1 | 708 | 1 | 712 | 0.0 | 1418 |
| MS.gene57831.t1 | MTR_6g077870 | 98.004 | 551 | 11 | 0 | 158 | 708 | 1 | 551 | 0.0 | 1110 |
| MS.gene57831.t1 | MTR_5g091600 | 72.182 | 683 | 180 | 4 | 28 | 706 | 4 | 680 | 0.0 | 998 |
| MS.gene57831.t1 | MTR_3g063490 | 69.986 | 693 | 201 | 4 | 19 | 706 | 4 | 694 | 0.0 | 981 |
| MS.gene57831.t1 | MTR_3g063520 | 73.313 | 667 | 172 | 4 | 46 | 708 | 26 | 690 | 0.0 | 947 |
| MS.gene57831.t1 | MTR_7g028250 | 57.453 | 644 | 260 | 7 | 59 | 693 | 35 | 673 | 0.0 | 768 |
| MS.gene57831.t1 | MTR_3g092090 | 53.264 | 674 | 291 | 8 | 27 | 693 | 7 | 663 | 0.0 | 751 |
| MS.gene57831.t1 | MTR_3g092090 | 53.012 | 664 | 288 | 8 | 27 | 683 | 7 | 653 | 0.0 | 733 |
| MS.gene57831.t1 | MTR_1g007580 | 51.807 | 664 | 298 | 8 | 46 | 696 | 18 | 672 | 0.0 | 723 |
| MS.gene57831.t1 | MTR_0312s0020 | 50.960 | 677 | 314 | 7 | 31 | 696 | 3 | 672 | 0.0 | 723 |
| MS.gene57831.t1 | MTR_1g007540 | 50.960 | 677 | 314 | 7 | 31 | 696 | 3 | 672 | 0.0 | 723 |
| MS.gene57831.t1 | MTR_1g077840 | 51.482 | 641 | 296 | 7 | 62 | 695 | 47 | 679 | 0.0 | 711 |
| MS.gene57831.t1 | MTR_1626s0010 | 47.917 | 240 | 120 | 2 | 234 | 473 | 1 | 235 | 1.56e-79 | 253 |
| MS.gene57831.t1 | MTR_5g091615 | 68.944 | 161 | 49 | 1 | 546 | 705 | 59 | 219 | 6.91e-68 | 225 |
| MS.gene57831.t1 | MTR_0312s0050 | 51.887 | 106 | 47 | 1 | 46 | 147 | 18 | 123 | 9.86e-31 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57831.t1 | AT1G65730 | 71.511 | 695 | 182 | 5 | 18 | 706 | 1 | 685 | 0.0 | 1043 |
| MS.gene57831.t1 | AT1G48370 | 71.489 | 712 | 185 | 5 | 13 | 706 | 9 | 720 | 0.0 | 1009 |
| MS.gene57831.t1 | AT3G17650 | 71.652 | 702 | 177 | 4 | 27 | 706 | 9 | 710 | 0.0 | 1008 |
| MS.gene57831.t1 | AT3G17650 | 71.652 | 702 | 177 | 4 | 27 | 706 | 9 | 710 | 0.0 | 1008 |
| MS.gene57831.t1 | AT1G48370 | 73.070 | 557 | 142 | 3 | 158 | 706 | 1 | 557 | 0.0 | 821 |
| MS.gene57831.t1 | AT3G27020 | 58.434 | 664 | 263 | 7 | 38 | 693 | 12 | 670 | 0.0 | 787 |
| MS.gene57831.t1 | AT5G53550 | 53.951 | 658 | 284 | 6 | 45 | 694 | 23 | 669 | 0.0 | 749 |
| MS.gene57831.t1 | AT5G53550 | 53.951 | 658 | 284 | 6 | 45 | 694 | 23 | 669 | 0.0 | 749 |
| MS.gene57831.t1 | AT5G53550 | 53.951 | 658 | 284 | 6 | 45 | 694 | 23 | 669 | 0.0 | 749 |
| MS.gene57831.t1 | AT5G53550 | 53.951 | 658 | 284 | 6 | 45 | 694 | 23 | 669 | 0.0 | 749 |
| MS.gene57831.t1 | AT5G53550 | 53.951 | 658 | 284 | 6 | 45 | 694 | 23 | 669 | 0.0 | 749 |
| MS.gene57831.t1 | AT5G41000 | 56.744 | 645 | 264 | 7 | 59 | 693 | 28 | 667 | 0.0 | 746 |
| MS.gene57831.t1 | AT4G24120 | 52.478 | 686 | 304 | 8 | 17 | 695 | 2 | 672 | 0.0 | 738 |
| MS.gene57831.t1 | AT5G24380 | 51.205 | 664 | 311 | 6 | 38 | 693 | 2 | 660 | 0.0 | 721 |
| MS.gene57831.t1 | AT5G41000 | 54.419 | 645 | 254 | 7 | 59 | 693 | 28 | 642 | 0.0 | 704 |
| MS.gene57831.t1 | AT5G53550 | 55.814 | 516 | 218 | 4 | 180 | 694 | 1 | 507 | 0.0 | 612 |
| MS.gene57831.t1 | AT5G41000 | 56.452 | 496 | 207 | 6 | 202 | 693 | 1 | 491 | 0.0 | 576 |
| MS.gene57831.t1 | AT5G45450 | 66.514 | 218 | 66 | 2 | 490 | 706 | 1 | 212 | 1.52e-98 | 302 |
Find 165 sgRNAs with CRISPR-Local
Find 371 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTGTGTTGTTGCTTCTTC+TGG | 0.151174 | 6.1:-68991924 | MS.gene57831:CDS |
| ATGGCAATACCTTTCTATTT+AGG | 0.166528 | 6.1:-68987276 | MS.gene57831:CDS |
| TAATGTCTCTGCTGGTCTTT+TGG | 0.168239 | 6.1:-68992039 | MS.gene57831:CDS |
| TAATTTCACCTTGTGTCTTT+TGG | 0.182441 | 6.1:-68987524 | MS.gene57831:CDS |
| GGTGCTAACTCATACCTTAT+TGG | 0.192771 | 6.1:-68988066 | MS.gene57831:CDS |
| TCCTTGGAGGAGTTCTTTCT+TGG | 0.198308 | 6.1:-68988443 | MS.gene57831:CDS |
| CCATTGTTGTGCCGATTATT+TGG | 0.212463 | 6.1:+68987553 | None:intergenic |
| GATAGGGTTGATACTTTCTT+AGG | 0.214363 | 6.1:-68987045 | MS.gene57831:CDS |
| TTTGCACCTGCTGTTGCTTC+TGG | 0.245860 | 6.1:-68987171 | MS.gene57831:CDS |
| ATGCTTTGTTATATATTCTT+TGG | 0.249346 | 6.1:-68987372 | MS.gene57831:CDS |
| CCATGCTCCGATTGAGAAAA+TGG | 0.255463 | 6.1:+68987719 | None:intergenic |
| TTCAAGGAATTCAAGGTTAC+AGG | 0.260833 | 6.1:-68988350 | MS.gene57831:CDS |
| GGATTTGGAAGTTACCTATT+TGG | 0.261414 | 6.1:-68989686 | MS.gene57831:CDS |
| CAGTGGTTACTTTGCTAGTT+TGG | 0.282368 | 6.1:+68988959 | None:intergenic |
| GTATTCTCTTGTCTAGTAAA+AGG | 0.283358 | 6.1:+68991957 | None:intergenic |
| GATTGTGGTAAACTTGATTA+AGG | 0.288358 | 6.1:-68987343 | MS.gene57831:CDS |
| CCTTGGAGGAGTTCTTTCTT+GGG | 0.290700 | 6.1:-68988442 | MS.gene57831:CDS |
| CTTGTATGAACAGGAGGATT+TGG | 0.291617 | 6.1:-68989701 | MS.gene57831:intron |
| GAAGTTTAATATTGTTTGTT+TGG | 0.293472 | 6.1:-68987224 | MS.gene57831:CDS |
| GTGCTAACTCATACCTTATT+GGG | 0.296695 | 6.1:-68988065 | MS.gene57831:CDS |
| ACATCTTCCCTCAACTAAAA+TGG | 0.319301 | 6.1:-68987848 | MS.gene57831:CDS |
| ACTGATATATTAATGATATA+TGG | 0.326302 | 6.1:+68988468 | None:intergenic |
| TCTTATGGGGTTTCTTTCAA+TGG | 0.331499 | 6.1:-68988798 | MS.gene57831:CDS |
| TGTCAAGGTCCACAAATGAT+AGG | 0.332824 | 6.1:-68987062 | MS.gene57831:CDS |
| CCTACATGGTTTGCAATTAG+TGG | 0.333118 | 6.1:-68987912 | MS.gene57831:CDS |
| CAAATAATCGGCACAACAAT+GGG | 0.336116 | 6.1:-68987552 | MS.gene57831:CDS |
| TTGAATTCCTTGAAGGTTGC+TGG | 0.339414 | 6.1:+68988359 | None:intergenic |
| TGATATGTGGTGATGGAATA+TGG | 0.339780 | 6.1:-68987146 | MS.gene57831:CDS |
| ACAAGGATTCAGTTCTTTAC+CGG | 0.358284 | 6.1:-68987406 | MS.gene57831:CDS |
| AAGTTTAATATTGTTTGTTT+GGG | 0.369097 | 6.1:-68987223 | MS.gene57831:CDS |
| TTTCAAGCCTTCCCTTCATT+AGG | 0.370895 | 6.1:-68988748 | MS.gene57831:CDS |
| GGTAAACTTGATTAAGGATT+CGG | 0.378893 | 6.1:-68987337 | MS.gene57831:CDS |
| CTTTAAGAAAGAGTTGTTTC+CGG | 0.382437 | 6.1:+68987943 | None:intergenic |
| GCAATTATCCATCCCAACTT+TGG | 0.383583 | 6.1:+68989611 | None:intergenic |
| TTGACTATACAAACCCAATA+AGG | 0.387419 | 6.1:+68988052 | None:intergenic |
| TGACAAGAACTTCATGCAAA+TGG | 0.390570 | 6.1:+68987080 | None:intergenic |
| TTTGTACCAATGACCCTCTC+TGG | 0.398473 | 6.1:+68988395 | None:intergenic |
| AATATTGTTTGTTTGGGAAA+AGG | 0.399568 | 6.1:-68987217 | MS.gene57831:CDS |
| CTTATGCAAGATTTCAAAAC+CGG | 0.403681 | 6.1:-68987615 | MS.gene57831:CDS |
| AAGGATTCGGTTGGTAAGGT+AGG | 0.403845 | 6.1:-68987324 | MS.gene57831:CDS |
| ATAATAATGAGCATGAAGAT+AGG | 0.408695 | 6.1:-68992325 | MS.gene57831:CDS |
| CTCAGTTGTGCCTCTTAGAA+AGG | 0.409163 | 6.1:-68989555 | MS.gene57831:intron |
| TGTAACCTTGAATTCCTTGA+AGG | 0.413896 | 6.1:+68988352 | None:intergenic |
| CATGTTCACTCATACCAAAT+AGG | 0.417530 | 6.1:+68989672 | None:intergenic |
| CACATGTCAATGGCAAAATA+AGG | 0.417542 | 6.1:+68987252 | None:intergenic |
| GTTGCTTCTGGTTTGATATG+TGG | 0.420440 | 6.1:-68987159 | MS.gene57831:CDS |
| CTTGAAGGTTGCTGGGACCA+AGG | 0.438296 | 6.1:+68988367 | None:intergenic |
| GGAAAAGGTTGACAAGGTTA+AGG | 0.441406 | 6.1:-68987202 | MS.gene57831:CDS |
| CAGGAAGCAAGTGAAATTGT+TGG | 0.441495 | 6.1:-68988842 | MS.gene57831:CDS |
| CATAGATTGTCACAACATAA+AGG | 0.446334 | 6.1:-68992245 | MS.gene57831:CDS |
| ACTAGTGTCTGAGGATTGAT+TGG | 0.448515 | 6.1:+68989646 | None:intergenic |
| TATACAGCTGCTGATGGGTG+TGG | 0.451437 | 6.1:-68988772 | MS.gene57831:CDS |
| AGGAAGCAAGTGAAATTGTT+GGG | 0.453448 | 6.1:-68988841 | MS.gene57831:CDS |
| TAGAAACCAGAGAGGGTCAT+TGG | 0.461241 | 6.1:-68988401 | MS.gene57831:CDS |
| ATGCTAAGGTTGGAGCAATC+AGG | 0.465083 | 6.1:+68987805 | None:intergenic |
| CCAAATAATCGGCACAACAA+TGG | 0.467718 | 6.1:-68987553 | MS.gene57831:CDS |
| AGCAACCTTCAAGGAATTCA+AGG | 0.467764 | 6.1:-68988357 | MS.gene57831:CDS |
| ACATGGACCGTGGTGAAGCC+AGG | 0.470143 | 6.1:+68987583 | None:intergenic |
| TGAATTCCTTGAAGGTTGCT+GGG | 0.470554 | 6.1:+68988360 | None:intergenic |
| TTCTCAATCGGAGCATGGGC+TGG | 0.470724 | 6.1:-68987714 | MS.gene57831:CDS |
| CCTTCACTTAATGTCTCTGC+TGG | 0.473944 | 6.1:-68992047 | MS.gene57831:CDS |
| AGCACTTATTAGTACCATCA+TGG | 0.474614 | 6.1:-68992169 | MS.gene57831:CDS |
| TTCTACACTTTATATTGGTG+TGG | 0.475325 | 6.1:-68988502 | MS.gene57831:CDS |
| ATGTTTGTGAGCCAAATAAT+CGG | 0.476829 | 6.1:-68987564 | MS.gene57831:CDS |
| GATTATTTGGCTCACAAACA+TGG | 0.480311 | 6.1:+68987566 | None:intergenic |
| TGGTCTATACAACTTTGTTA+AGG | 0.481791 | 6.1:-68988087 | MS.gene57831:CDS |
| AGTATCAACCCTATCATTTG+TGG | 0.485819 | 6.1:+68987053 | None:intergenic |
| GGAGAGTCTTGATCCGCAAC+AGG | 0.487808 | 6.1:+68987999 | None:intergenic |
| CTTGGAGGAGTTCTTTCTTG+GGG | 0.488944 | 6.1:-68988441 | MS.gene57831:CDS |
| CTTGGTCCCAGCAACCTTCA+AGG | 0.489296 | 6.1:-68988366 | MS.gene57831:CDS |
| GACAAGAACTTCATGCAAAT+GGG | 0.489849 | 6.1:+68987081 | None:intergenic |
| ATGAAACTTAATCTTACTAC+TGG | 0.492220 | 6.1:-68992077 | MS.gene57831:CDS |
| CAAAGCATGAGGCAATTATC+CGG | 0.498117 | 6.1:+68987387 | None:intergenic |
| AATATATCAGTTCTCCTTGG+AGG | 0.502394 | 6.1:-68988456 | MS.gene57831:CDS |
| ATTAATATATCAGTTCTCCT+TGG | 0.503428 | 6.1:-68988459 | MS.gene57831:CDS |
| GATTAAGGATTCGGTTGGTA+AGG | 0.506556 | 6.1:-68987328 | MS.gene57831:CDS |
| AAAGGTATTGCCATAGCCAT+TGG | 0.509985 | 6.1:+68987285 | None:intergenic |
| TACACAATTGCATAGGGCGC+AGG | 0.511720 | 6.1:+68987453 | None:intergenic |
| ATAGCCATAGCCATGATCCT+TGG | 0.513227 | 6.1:-68988113 | MS.gene57831:CDS |
| TCTACACTTTATATTGGTGT+GGG | 0.513632 | 6.1:-68988501 | MS.gene57831:CDS |
| GTTTGGCTCCTTGAGGAGTG+TGG | 0.515407 | 6.1:+68988976 | None:intergenic |
| CATCTGCCCTTCGTTTGTCC+CGG | 0.515709 | 6.1:+68988027 | None:intergenic |
| TACCGCAACATGGCGATACT+CGG | 0.519758 | 6.1:-68987432 | MS.gene57831:CDS |
| AAAAGAGCAAGTATTGAAGC+AGG | 0.521563 | 6.1:+68987117 | None:intergenic |
| ACTTCCAACACACATGTCAA+TGG | 0.522890 | 6.1:+68987242 | None:intergenic |
| AAATAAGGTCCTAAATAGAA+AGG | 0.525642 | 6.1:+68987267 | None:intergenic |
| ATTCTTTGGCGCAGCGATTG+TGG | 0.525714 | 6.1:-68987358 | MS.gene57831:CDS |
| TTCTTTCTTGGGGAGTAATG+TGG | 0.528506 | 6.1:-68988431 | MS.gene57831:CDS |
| TAGACCATCTCCAAGGATCA+TGG | 0.531309 | 6.1:+68988103 | None:intergenic |
| TGGGTTTGTATAGTCAACTC+CGG | 0.531616 | 6.1:-68988046 | MS.gene57831:CDS |
| TGGTCCCTAGCATCGACCTA+TGG | 0.538553 | 6.1:-68987750 | MS.gene57831:CDS |
| ATCTCCAAGGATCATGGCTA+TGG | 0.539270 | 6.1:+68988109 | None:intergenic |
| TGAAGCCAGGGTAAGGTAGC+CGG | 0.539696 | 6.1:+68987596 | None:intergenic |
| TGGTTCTATACAGCTGCTGA+TGG | 0.540404 | 6.1:-68988778 | MS.gene57831:CDS |
| CTTAAAATCACTAGTGTCTG+AGG | 0.541585 | 6.1:+68989637 | None:intergenic |
| CTTGCTAGTCTTGCAGCCTG+TGG | 0.541891 | 6.1:-68987672 | MS.gene57831:CDS |
| CCCTCTCTGGTTTCTATGAG+AGG | 0.542261 | 6.1:+68988408 | None:intergenic |
| TTTGCTAGTTTGGCTCCTTG+AGG | 0.542951 | 6.1:+68988969 | None:intergenic |
| TATGCTTTGAGTCCTAATGA+AGG | 0.546514 | 6.1:+68988736 | None:intergenic |
| TGAGCAGTTGCAGTACCACT+TGG | 0.550234 | 6.1:+68989014 | None:intergenic |
| GTTGCGGTACACAATTGCAT+AGG | 0.551367 | 6.1:+68987446 | None:intergenic |
| TTAAGGATCCAAAGTTGGGA+TGG | 0.551545 | 6.1:-68989619 | MS.gene57831:CDS |
| AGGATTCGGTTGGTAAGGTA+GGG | 0.553397 | 6.1:-68987323 | MS.gene57831:CDS |
| CAAAACCGGCTACCTTACCC+TGG | 0.553851 | 6.1:-68987601 | MS.gene57831:CDS |
| TAATAATGAGCATGAAGATA+GGG | 0.554096 | 6.1:-68992324 | MS.gene57831:CDS |
| ACCGTGGTGAAGCCAGGGTA+AGG | 0.556646 | 6.1:+68987589 | None:intergenic |
| TCTGGTTTGATATGTGGTGA+TGG | 0.557129 | 6.1:-68987153 | MS.gene57831:CDS |
| AACAGCTTCCACACTCCTCA+AGG | 0.557684 | 6.1:-68988984 | MS.gene57831:CDS |
| TTTGCATGAAGTTCTTGTCA+AGG | 0.557889 | 6.1:-68987077 | MS.gene57831:CDS |
| ATGGCGATACTCGGAGTACA+AGG | 0.557969 | 6.1:-68987423 | MS.gene57831:CDS |
| GCATTGCAAAATGCTAAGGT+TGG | 0.558181 | 6.1:+68987795 | None:intergenic |
| GTCAAGGTCCACAAATGATA+GGG | 0.560228 | 6.1:-68987061 | MS.gene57831:CDS |
| ATGGTTGTGGACTAACAGAT+TGG | 0.563504 | 6.1:-68987770 | MS.gene57831:CDS |
| CCACTAATTGCAAACCATGT+AGG | 0.563777 | 6.1:+68987912 | None:intergenic |
| GCATGGGCTGGTGCATCACA+TGG | 0.564605 | 6.1:-68987702 | MS.gene57831:CDS |
| ATTGCCATAGCCATTGGAAG+TGG | 0.566809 | 6.1:+68987291 | None:intergenic |
| GGGTTTGTATAGTCAACTCC+GGG | 0.567231 | 6.1:-68988045 | MS.gene57831:CDS |
| CATACCACTTCCAATGGCTA+TGG | 0.569131 | 6.1:-68987295 | MS.gene57831:CDS |
| GGCAGATGCTCTACCTGTTG+CGG | 0.571689 | 6.1:-68988012 | MS.gene57831:CDS |
| GTTAACTGATTCCTCCATGA+TGG | 0.571809 | 6.1:+68992155 | None:intergenic |
| TTTGCCATTGACATGTGTGT+TGG | 0.573547 | 6.1:-68987246 | MS.gene57831:CDS |
| ATCTGTTAGTCCACAACCAT+AGG | 0.575557 | 6.1:+68987773 | None:intergenic |
| GTCAACTCCGGGACAAACGA+AGG | 0.575818 | 6.1:-68988034 | MS.gene57831:CDS |
| CATGGACCGTGGTGAAGCCA+GGG | 0.583856 | 6.1:+68987584 | None:intergenic |
| TTAAAGATCAGATTCCTACA+TGG | 0.584073 | 6.1:-68987926 | MS.gene57831:CDS |
| ATAGGCATTGCAAAATGCTA+AGG | 0.584698 | 6.1:+68987791 | None:intergenic |
| GGTTCTATACAGCTGCTGAT+GGG | 0.586315 | 6.1:-68988777 | MS.gene57831:CDS |
| TTTGAGTCCTAATGAAGGGA+AGG | 0.592188 | 6.1:+68988741 | None:intergenic |
| TGCAATTGTGTACCGCAACA+TGG | 0.597605 | 6.1:-68987442 | MS.gene57831:CDS |
| AACTTGATTAAGGATTCGGT+TGG | 0.598409 | 6.1:-68987333 | MS.gene57831:CDS |
| CTCCGAGTATCGCCATGTTG+CGG | 0.598881 | 6.1:+68987430 | None:intergenic |
| ATTCGGTTGGTAAGGTAGGG+AGG | 0.598930 | 6.1:-68987320 | MS.gene57831:CDS |
| TTGCGGTACACAATTGCATA+GGG | 0.599911 | 6.1:+68987447 | None:intergenic |
| TCAAGGAATTCAAGGTTACA+GGG | 0.602818 | 6.1:-68988349 | MS.gene57831:intron |
| GTAAGATAACTCAGGACTCG+AGG | 0.605381 | 6.1:+68987977 | None:intergenic |
| GAGGTTCATACCACTTCCAA+TGG | 0.605541 | 6.1:-68987301 | MS.gene57831:CDS |
| ATGCTTTGAGTCCTAATGAA+GGG | 0.608080 | 6.1:+68988737 | None:intergenic |
| GATGTTCATCATGACTCCAC+AGG | 0.611808 | 6.1:+68987656 | None:intergenic |
| AGAATATATAACAAAGCATG+AGG | 0.611959 | 6.1:+68987376 | None:intergenic |
| TACAAAGCATTTCCTGACCT+AGG | 0.612341 | 6.1:-68987495 | MS.gene57831:CDS |
| ATCAAACCAGAAGCAACAGC+AGG | 0.613290 | 6.1:+68987165 | None:intergenic |
| AACATAAAGGTAGTAGTACA+AGG | 0.613392 | 6.1:-68992232 | MS.gene57831:CDS |
| TGTTTGGGAAAAGGTTGACA+AGG | 0.619259 | 6.1:-68987208 | MS.gene57831:CDS |
| CCCAAGAAAGAACTCCTCCA+AGG | 0.622090 | 6.1:+68988442 | None:intergenic |
| ACCTTACCCTGGCTTCACCA+CGG | 0.622675 | 6.1:-68987590 | MS.gene57831:CDS |
| ATAGCCATGATCCTTGGAGA+TGG | 0.623397 | 6.1:-68988107 | MS.gene57831:CDS |
| GAAGATAGGGTAGTTGACAA+TGG | 0.624032 | 6.1:-68992311 | MS.gene57831:CDS |
| TGATCATCGTAAGATAACTC+AGG | 0.626341 | 6.1:+68987969 | None:intergenic |
| ACACAATTGCATAGGGCGCA+GGG | 0.626742 | 6.1:+68987454 | None:intergenic |
| TAAGATAACTCAGGACTCGA+GGG | 0.628178 | 6.1:+68987978 | None:intergenic |
| TTTAGTTGAGGGAAGATGTG+CGG | 0.628491 | 6.1:+68987852 | None:intergenic |
| TATCTTACGATGATCAGCGC+CGG | 0.641527 | 6.1:-68987962 | MS.gene57831:CDS |
| TCAACTCCGGGACAAACGAA+GGG | 0.644762 | 6.1:-68988033 | MS.gene57831:CDS |
| CCAGCAGAGACATTAAGTGA+AGG | 0.650274 | 6.1:+68992047 | None:intergenic |
| TTCAAATTAACATATCCAAG+TGG | 0.661554 | 6.1:-68989029 | MS.gene57831:CDS |
| AGGGAAGATGTGCGGCAATG+TGG | 0.666147 | 6.1:+68987860 | None:intergenic |
| AAGAACTTCATGCAAATGGG+AGG | 0.671226 | 6.1:+68987084 | None:intergenic |
| AGTTGTATAGACCATCTCCA+AGG | 0.673257 | 6.1:+68988096 | None:intergenic |
| TAGAAAATCCAAAAGACACA+AGG | 0.677007 | 6.1:+68987516 | None:intergenic |
| AAATAATCGGCACAACAATG+GGG | 0.703365 | 6.1:-68987551 | MS.gene57831:CDS |
| TGGCTCACAAACATGGACCG+TGG | 0.716717 | 6.1:+68987573 | None:intergenic |
| GCCTCTCATAGAAACCAGAG+AGG | 0.722428 | 6.1:-68988409 | MS.gene57831:CDS |
| CCTCTCATAGAAACCAGAGA+GGG | 0.726173 | 6.1:-68988408 | MS.gene57831:CDS |
| TGGGCTGGTGCATCACATGG+TGG | 0.730725 | 6.1:-68987699 | MS.gene57831:CDS |
| ACTTATTAGTACCATCATGG+AGG | 0.730761 | 6.1:-68992166 | MS.gene57831:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCTAAATTTATTTATTTGT+AGG | - | chr6.1:68990831-68990850 | MS.gene57831:intron | 10.0% |
| !! | AAGTTTAATATTGTTTGTTT+GGG | - | chr6.1:68992147-68992166 | MS.gene57831:CDS | 15.0% |
| !! | AATCTATACTTATATAGAAA+TGG | - | chr6.1:68990726-68990745 | MS.gene57831:intron | 15.0% |
| !! | ACAATTAATTTCATCAAATT+AGG | + | chr6.1:68989643-68989662 | None:intergenic | 15.0% |
| !! | ACAGAAAAAAAAATATATCT+TGG | - | chr6.1:68989150-68989169 | MS.gene57831:intron | 15.0% |
| !! | ACTGATATATTAATGATATA+TGG | + | chr6.1:68990905-68990924 | None:intergenic | 15.0% |
| !! | ATAATCAAATCATAGTAATA+AGG | + | chr6.1:68987630-68987649 | None:intergenic | 15.0% |
| !! | ATCACAGTTATTAAAAATAT+AGG | - | chr6.1:68989505-68989524 | MS.gene57831:intron | 15.0% |
| !! | TAATTCTTCAAAGAAAATTA+GGG | - | chr6.1:68988089-68988108 | MS.gene57831:CDS | 15.0% |
| !! | TATTTGTCTCATTATAATTT+GGG | - | chr6.1:68990802-68990821 | MS.gene57831:intron | 15.0% |
| !!! | TAATTAATCGTACTTTTTTA+AGG | - | chr6.1:68991184-68991203 | MS.gene57831:intron | 15.0% |
| !!! | TTAATTTTTCTGAATATGAT+AGG | - | chr6.1:68988563-68988582 | MS.gene57831:intron | 15.0% |
| !! | AAATGCAAGTAATTCAATAT+AGG | + | chr6.1:68990184-68990203 | None:intergenic | 20.0% |
| !! | AAATTAAATTCTGTCCAAAT+TGG | + | chr6.1:68988550-68988569 | None:intergenic | 20.0% |
| !! | AAGTAATTCAATATAGGATT+TGG | + | chr6.1:68990178-68990197 | None:intergenic | 20.0% |
| !! | ATCTTATGAAAACAGTTAAT+AGG | - | chr6.1:68988176-68988195 | MS.gene57831:intron | 20.0% |
| !! | ATTTGTCTCATTATAATTTG+GGG | - | chr6.1:68990803-68990822 | MS.gene57831:intron | 20.0% |
| !! | CTAATTCTTCAAAGAAAATT+AGG | - | chr6.1:68988088-68988107 | MS.gene57831:CDS | 20.0% |
| !! | CTATTTGTCTCATTATAATT+TGG | - | chr6.1:68990801-68990820 | MS.gene57831:intron | 20.0% |
| !! | GAAGTTTAATATTGTTTGTT+TGG | - | chr6.1:68992146-68992165 | MS.gene57831:CDS | 20.0% |
| !! | TGAATAAGTTTGATTGAAAA+TGG | + | chr6.1:68990685-68990704 | None:intergenic | 20.0% |
| !! | TTAATATATATTGCTGTGTT+GGG | + | chr6.1:68988996-68989015 | None:intergenic | 20.0% |
| !!! | AAGAACTTTGAAAATTTATG+TGG | - | chr6.1:68988510-68988529 | MS.gene57831:CDS | 20.0% |
| !!! | AAGTCAAATTATACTACTTT+TGG | - | chr6.1:68988603-68988622 | MS.gene57831:intron | 20.0% |
| !!! | AATCTGTATTTTTCAAAGTA+TGG | + | chr6.1:68988459-68988478 | None:intergenic | 20.0% |
| !!! | ACATAAATTTTCAAAGTTCT+TGG | + | chr6.1:68988511-68988530 | None:intergenic | 20.0% |
| !!! | AGATTTTTCTATATTTTCCA+TGG | - | chr6.1:68988474-68988493 | MS.gene57831:CDS | 20.0% |
| !!! | ATATTTTATACCTTTCTAAG+AGG | + | chr6.1:68989828-68989847 | None:intergenic | 20.0% |
| !!! | ATGCTTTGTTATATATTCTT+TGG | - | chr6.1:68991998-68992017 | MS.gene57831:CDS | 20.0% |
| !!! | GATTTTTCTACACTTTATAT+TGG | - | chr6.1:68990863-68990882 | MS.gene57831:intron | 20.0% |
| !!! | GCATTTTTTCAAATTATTAC+TGG | - | chr6.1:68990198-68990217 | MS.gene57831:intron | 20.0% |
| ! | AAATAAGGTCCTAAATAGAA+AGG | + | chr6.1:68992106-68992125 | None:intergenic | 25.0% |
| ! | AATATTGTTTGTTTGGGAAA+AGG | - | chr6.1:68992153-68992172 | MS.gene57831:CDS | 25.0% |
| ! | ACAGCAATATATATTAACGA+GGG | - | chr6.1:68988999-68989018 | MS.gene57831:CDS | 25.0% |
| ! | AGAATATATAACAAAGCATG+AGG | + | chr6.1:68991997-68992016 | None:intergenic | 25.0% |
| ! | AGACAAATAGTTTAAACGAA+GGG | + | chr6.1:68990791-68990810 | None:intergenic | 25.0% |
| ! | ATAATAATGAGCATGAAGAT+AGG | - | chr6.1:68987045-68987064 | MS.gene57831:CDS | 25.0% |
| ! | ATCACTTGAATTTAATCACT+TGG | - | chr6.1:68987870-68987889 | MS.gene57831:CDS | 25.0% |
| ! | ATGAAACTTAATCTTACTAC+TGG | - | chr6.1:68987293-68987312 | MS.gene57831:CDS | 25.0% |
| ! | ATTAATATATCAGTTCTCCT+TGG | - | chr6.1:68990911-68990930 | MS.gene57831:intron | 25.0% |
| ! | CTGTATTTATTAGTCCAATT+TGG | - | chr6.1:68988533-68988552 | MS.gene57831:intron | 25.0% |
| ! | GTATTACAAACTGTTTAATC+TGG | - | chr6.1:68989179-68989198 | MS.gene57831:intron | 25.0% |
| ! | GTATTTACACTATAAGAACT+TGG | - | chr6.1:68988260-68988279 | MS.gene57831:intron | 25.0% |
| ! | GTTAATATATATTGCTGTGT+TGG | + | chr6.1:68988997-68989016 | None:intergenic | 25.0% |
| ! | TAATAATGAGCATGAAGATA+GGG | - | chr6.1:68987046-68987065 | MS.gene57831:CDS | 25.0% |
| ! | TCCTTATCTCCAAAAAAATT+AGG | + | chr6.1:68988025-68988044 | None:intergenic | 25.0% |
| ! | TGTTAGGTTTGAAAATGATA+AGG | - | chr6.1:68987954-68987973 | MS.gene57831:CDS | 25.0% |
| ! | TTAAATGTTGCCTATGTTAA+TGG | - | chr6.1:68990297-68990316 | MS.gene57831:intron | 25.0% |
| ! | TTATCTACATCCATTAACAT+AGG | + | chr6.1:68990310-68990329 | None:intergenic | 25.0% |
| ! | TTCAAATTAACATATCCAAG+TGG | - | chr6.1:68990341-68990360 | MS.gene57831:intron | 25.0% |
| ! | TTTGATGTTATACATGTGAA+AGG | - | chr6.1:68989561-68989580 | MS.gene57831:CDS | 25.0% |
| !! | AATTTGATAGTATGCTTGTT+AGG | - | chr6.1:68987938-68987957 | MS.gene57831:CDS | 25.0% |
| !! | ACACGTTCAATCTAAAATTT+CGG | + | chr6.1:68989913-68989932 | None:intergenic | 25.0% |
| !! | ATGTTAATGGATGTAGATAA+TGG | - | chr6.1:68990310-68990329 | MS.gene57831:intron | 25.0% |
| !! | GATTTTTCTTTGTCAAAACT+TGG | - | chr6.1:68987354-68987373 | MS.gene57831:CDS | 25.0% |
| !! | TAAGGAATAGTCAAGATTTT+CGG | - | chr6.1:68987972-68987991 | MS.gene57831:CDS | 25.0% |
| !! | TGTTGTATTATGGATTTTGA+CGG | - | chr6.1:68987762-68987781 | MS.gene57831:CDS | 25.0% |
| !!! | ATGTAATACCATTTTAGTTG+AGG | + | chr6.1:68991533-68991552 | None:intergenic | 25.0% |
| !!! | CAAAACTGATTTTAAGTTAC+TGG | - | chr6.1:68989885-68989904 | MS.gene57831:intron | 25.0% |
| !!! | CTACAGTATCCTAATTTTTT+TGG | - | chr6.1:68988013-68988032 | MS.gene57831:CDS | 25.0% |
| !!! | CTTCAGTTTTAGTTTCTTAT+GGG | - | chr6.1:68990558-68990577 | MS.gene57831:intron | 25.0% |
| !!! | TACAAAGTATTGTCAACTAA+CGG | - | chr6.1:68989307-68989326 | MS.gene57831:intron | 25.0% |
| !!! | TCCTAATTTTTTTGGAGATA+AGG | - | chr6.1:68988021-68988040 | MS.gene57831:CDS | 25.0% |
| !!! | TCTTCAGTTTTAGTTTCTTA+TGG | - | chr6.1:68990557-68990576 | MS.gene57831:intron | 25.0% |
| !!! | TGTAATACCATTTTAGTTGA+GGG | + | chr6.1:68991532-68991551 | None:intergenic | 25.0% |
| !!! | TTCAGTTTTAGTTTCTTATG+GGG | - | chr6.1:68990559-68990578 | MS.gene57831:intron | 25.0% |
| AAAGAAAATTAGGGCATGTT+TGG | - | chr6.1:68988098-68988117 | MS.gene57831:CDS | 30.0% | |
| AACATAAAGGTAGTAGTACA+AGG | - | chr6.1:68987138-68987157 | MS.gene57831:CDS | 30.0% | |
| AAGATTGAGTTATTGTACAG+TGG | + | chr6.1:68990431-68990450 | None:intergenic | 30.0% | |
| AATCAAACTAAGACCTAAAG+AGG | + | chr6.1:68988742-68988761 | None:intergenic | 30.0% | |
| ACAGTTGAATCAAAATCAGA+TGG | - | chr6.1:68990015-68990034 | MS.gene57831:intron | 30.0% | |
| ACATAGGCAACATTTAATCA+AGG | + | chr6.1:68990294-68990313 | None:intergenic | 30.0% | |
| ATATGTACTACAGTGGTTAA+TGG | - | chr6.1:68988321-68988340 | MS.gene57831:intron | 30.0% | |
| ATGGCAATACCTTTCTATTT+AGG | - | chr6.1:68992094-68992113 | MS.gene57831:CDS | 30.0% | |
| ATGTTTGTGAGCCAAATAAT+CGG | - | chr6.1:68991806-68991825 | MS.gene57831:intron | 30.0% | |
| CACAGCAATATATATTAACG+AGG | - | chr6.1:68988998-68989017 | MS.gene57831:CDS | 30.0% | |
| CATAGATTGTCACAACATAA+AGG | - | chr6.1:68987125-68987144 | MS.gene57831:CDS | 30.0% | |
| CTTATGCAAGATTTCAAAAC+CGG | - | chr6.1:68991755-68991774 | MS.gene57831:intron | 30.0% | |
| GAGACAAATAGTTTAAACGA+AGG | + | chr6.1:68990792-68990811 | None:intergenic | 30.0% | |
| GATTAATTACATTCAGTGGA+TGG | + | chr6.1:68991173-68991192 | None:intergenic | 30.0% | |
| GATTGTGGTAAACTTGATTA+AGG | - | chr6.1:68992027-68992046 | MS.gene57831:CDS | 30.0% | |
| GGTAAACTTGATTAAGGATT+CGG | - | chr6.1:68992033-68992052 | MS.gene57831:CDS | 30.0% | |
| GTAAGGTGAAGCAAATTAAA+GGG | + | chr6.1:68991214-68991233 | None:intergenic | 30.0% | |
| GTACGATTAATTACATTCAG+TGG | + | chr6.1:68991177-68991196 | None:intergenic | 30.0% | |
| GTATTCTCTTGTCTAGTAAA+AGG | + | chr6.1:68987416-68987435 | None:intergenic | 30.0% | |
| TAGAAAATCCAAAAGACACA+AGG | + | chr6.1:68991857-68991876 | None:intergenic | 30.0% | |
| TAGAGAAGAAAAAATCGTTG+TGG | + | chr6.1:68988885-68988904 | None:intergenic | 30.0% | |
| TAGTCAAATATGTACTACAG+TGG | - | chr6.1:68988314-68988333 | MS.gene57831:intron | 30.0% | |
| TCATGTTGAAATTTGATGTG+TGG | - | chr6.1:68987564-68987583 | MS.gene57831:CDS | 30.0% | |
| TCCACTGAAAATAAATCATG+TGG | - | chr6.1:68989119-68989138 | MS.gene57831:intron | 30.0% | |
| TCTACACTTTATATTGGTGT+GGG | - | chr6.1:68990869-68990888 | MS.gene57831:intron | 30.0% | |
| TCTTATCACTTGTATGTTTG+TGG | + | chr6.1:68988924-68988943 | None:intergenic | 30.0% | |
| TGGTCTATACAACTTTGTTA+AGG | - | chr6.1:68991283-68991302 | MS.gene57831:intron | 30.0% | |
| TGTAAGGTGAAGCAAATTAA+AGG | + | chr6.1:68991215-68991234 | None:intergenic | 30.0% | |
| TTAAAGATCAGATTCCTACA+TGG | - | chr6.1:68991444-68991463 | MS.gene57831:intron | 30.0% | |
| TTCTACACTTTATATTGGTG+TGG | - | chr6.1:68990868-68990887 | MS.gene57831:intron | 30.0% | |
| TTGACTATACAAACCCAATA+AGG | + | chr6.1:68991321-68991340 | None:intergenic | 30.0% | |
| ! | AGATAAGGATTTGAGATAAG+AGG | - | chr6.1:68988036-68988055 | MS.gene57831:CDS | 30.0% |
| ! | ATAAGGATTTGAGATAAGAG+GGG | - | chr6.1:68988038-68988057 | MS.gene57831:CDS | 30.0% |
| ! | ATGTATGATGTAACCCATTT+TGG | - | chr6.1:68988673-68988692 | MS.gene57831:intron | 30.0% |
| ! | CAAAACTTGGACTAAGTTTT+TGG | - | chr6.1:68987367-68987386 | MS.gene57831:CDS | 30.0% |
| ! | CTTTAAGAAAGAGTTGTTTC+CGG | + | chr6.1:68991430-68991449 | None:intergenic | 30.0% |
| ! | GATAAGGATTTGAGATAAGA+GGG | - | chr6.1:68988037-68988056 | MS.gene57831:CDS | 30.0% |
| ! | GTTTTCAATATTTCACTGTC+TGG | - | chr6.1:68988374-68988393 | MS.gene57831:CDS | 30.0% |
| ! | TAATTTCACCTTGTGTCTTT+TGG | - | chr6.1:68991846-68991865 | MS.gene57831:intron | 30.0% |
| ! | TCCTAAGTACTGTCAAATAA+TGG | - | chr6.1:68989404-68989423 | MS.gene57831:intron | 30.0% |
| ! | TCTTAATCCTCCTGTTTTAT+GGG | - | chr6.1:68987731-68987750 | MS.gene57831:CDS | 30.0% |
| ! | TTCTTAATCCTCCTGTTTTA+TGG | - | chr6.1:68987730-68987749 | MS.gene57831:CDS | 30.0% |
| ! | TTTTAGTACGTATTTGTGTC+CGG | - | chr6.1:68990229-68990248 | MS.gene57831:intron | 30.0% |
| ! | TTTTGACGGTAAGTAAATTC+TGG | - | chr6.1:68987776-68987795 | MS.gene57831:CDS | 30.0% |
| ! | TTTTTCTTCTCTACGTATCT+CGG | - | chr6.1:68988892-68988911 | MS.gene57831:intron | 30.0% |
| !! | AAACTAGCCATTTTCTCAAT+CGG | - | chr6.1:68991644-68991663 | MS.gene57831:intron | 30.0% |
| !! | ATTGACTTTTATGTGTTCCT+AGG | + | chr6.1:68991895-68991914 | None:intergenic | 30.0% |
| !! | GATTTTAAGGATCCAAAGTT+GGG | - | chr6.1:68989747-68989766 | MS.gene57831:intron | 30.0% |
| !! | TCCACATGATTTATTTTCAG+TGG | + | chr6.1:68989123-68989142 | None:intergenic | 30.0% |
| !! | TGATTTATTTTCAGTGGAAG+TGG | + | chr6.1:68989117-68989136 | None:intergenic | 30.0% |
| !! | TGATTTTAAGGATCCAAAGT+TGG | - | chr6.1:68989746-68989765 | MS.gene57831:intron | 30.0% |
| !! | TTTTCCTTTTCTACTTTTCC+AGG | - | chr6.1:68990509-68990528 | MS.gene57831:intron | 30.0% |
| !! | TTTTCGGCAGAGTTTTTTTT+AGG | - | chr6.1:68987988-68988007 | MS.gene57831:CDS | 30.0% |
| !!! | CTCTTTGTTGTTAGCTTTTT+GGG | - | chr6.1:68989786-68989805 | MS.gene57831:intron | 30.0% |
| !!! | TCTCTTTGTTGTTAGCTTTT+TGG | - | chr6.1:68989785-68989804 | MS.gene57831:intron | 30.0% |
| AAATAATCGGCACAACAATG+GGG | - | chr6.1:68991819-68991838 | MS.gene57831:intron | 35.0% | |
| AAATCGTGCTTGACTGTATT+CGG | - | chr6.1:68991098-68991117 | MS.gene57831:intron | 35.0% | |
| AAATTAGGGCATGTTTGGAT+TGG | - | chr6.1:68988103-68988122 | MS.gene57831:CDS | 35.0% | |
| AATATATCAGTTCTCCTTGG+AGG | - | chr6.1:68990914-68990933 | MS.gene57831:intron | 35.0% | |
| ACAAGGATTCAGTTCTTTAC+CGG | - | chr6.1:68991964-68991983 | MS.gene57831:CDS | 35.0% | |
| ACACGACACATGTGATTATA+TGG | - | chr6.1:68989968-68989987 | MS.gene57831:intron | 35.0% | |
| ACATCTTCCCTCAACTAAAA+TGG | - | chr6.1:68991522-68991541 | MS.gene57831:intron | 35.0% | |
| ACCACTAGATCAACCAAAAT+GGG | + | chr6.1:68988689-68988708 | None:intergenic | 35.0% | |
| ACTTATTAGTACCATCATGG+AGG | - | chr6.1:68987204-68987223 | MS.gene57831:CDS | 35.0% | |
| AGAAGAAAAAATCGTTGTGG+CGG | + | chr6.1:68988882-68988901 | None:intergenic | 35.0% | |
| AGCACTTATTAGTACCATCA+TGG | - | chr6.1:68987201-68987220 | MS.gene57831:CDS | 35.0% | |
| AGGAAGCAAGTGAAATTGTT+GGG | - | chr6.1:68990529-68990548 | MS.gene57831:intron | 35.0% | |
| AGTATCAACCCTATCATTTG+TGG | + | chr6.1:68992320-68992339 | None:intergenic | 35.0% | |
| CAAATAATCGGCACAACAAT+GGG | - | chr6.1:68991818-68991837 | MS.gene57831:intron | 35.0% | |
| CACATGTCAATGGCAAAATA+AGG | + | chr6.1:68992121-68992140 | None:intergenic | 35.0% | |
| CATGTTCACTCATACCAAAT+AGG | + | chr6.1:68989701-68989720 | None:intergenic | 35.0% | |
| CTGAATATGATAGGAGTAGA+AGG | - | chr6.1:68988572-68988591 | MS.gene57831:intron | 35.0% | |
| CTTAAAATCACTAGTGTCTG+AGG | + | chr6.1:68989736-68989755 | None:intergenic | 35.0% | |
| GACAAGAACTTCATGCAAAT+GGG | + | chr6.1:68992292-68992311 | None:intergenic | 35.0% | |
| GCCATTATTTGACAGTACTT+AGG | + | chr6.1:68989408-68989427 | None:intergenic | 35.0% | |
| GGATTTGGAAGTTACCTATT+TGG | - | chr6.1:68989684-68989703 | MS.gene57831:CDS | 35.0% | |
| GTAGTACATATTTGACTAGC+TGG | + | chr6.1:68988312-68988331 | None:intergenic | 35.0% | |
| GTGCTAACTCATACCTTATT+GGG | - | chr6.1:68991305-68991324 | MS.gene57831:intron | 35.0% | |
| GTGGAAAAAATTCCCTCATA+AGG | + | chr6.1:68989098-68989117 | None:intergenic | 35.0% | |
| TAAATACCTGCAGAACTCAA+TGG | + | chr6.1:68991238-68991257 | None:intergenic | 35.0% | |
| TAGTCACGTTGTTAGTACAT+TGG | + | chr6.1:68990131-68990150 | None:intergenic | 35.0% | |
| TAGTCAGTGTTGTCAAATAG+CGG | - | chr6.1:68989218-68989237 | MS.gene57831:intron | 35.0% | |
| TCAAATTAGTCCACCGAAAT+TGG | + | chr6.1:68988775-68988794 | None:intergenic | 35.0% | |
| TCTTATGGGGTTTCTTTCAA+TGG | - | chr6.1:68990572-68990591 | MS.gene57831:intron | 35.0% | |
| TGACAAGAACTTCATGCAAA+TGG | + | chr6.1:68992293-68992312 | None:intergenic | 35.0% | |
| TGATCATCGTAAGATAACTC+AGG | + | chr6.1:68991404-68991423 | None:intergenic | 35.0% | |
| TGTGATTCACTTGTATGAAC+AGG | - | chr6.1:68989660-68989679 | MS.gene57831:CDS | 35.0% | |
| TGTGTTCAAATATGCAGTAG+AGG | + | chr6.1:68991075-68991094 | None:intergenic | 35.0% | |
| TTTCTGTCAGGATTAGAACT+CGG | - | chr6.1:68987809-68987828 | MS.gene57831:CDS | 35.0% | |
| TTTGCATGAAGTTCTTGTCA+AGG | - | chr6.1:68992293-68992312 | MS.gene57831:CDS | 35.0% | |
| ! | AACTTGATTAAGGATTCGGT+TGG | - | chr6.1:68992037-68992056 | MS.gene57831:CDS | 35.0% |
| ! | ATAGGCATTGCAAAATGCTA+AGG | + | chr6.1:68991582-68991601 | None:intergenic | 35.0% |
| ! | ATGCTTTGAGTCCTAATGAA+GGG | + | chr6.1:68990636-68990655 | None:intergenic | 35.0% |
| ! | CTATTTGACAACACTGACTA+TGG | + | chr6.1:68989218-68989237 | None:intergenic | 35.0% |
| ! | CTCAGACACTAGTGATTTTA+AGG | - | chr6.1:68989734-68989753 | MS.gene57831:intron | 35.0% |
| ! | GATTATTTGGCTCACAAACA+TGG | + | chr6.1:68991807-68991826 | None:intergenic | 35.0% |
| ! | GCTTCAATACTTGCTCTTTT+TGG | - | chr6.1:68992256-68992275 | MS.gene57831:CDS | 35.0% |
| ! | TATGCTTTGAGTCCTAATGA+AGG | + | chr6.1:68990637-68990656 | None:intergenic | 35.0% |
| ! | TTAGCATTTTGCAATGCCTA+TGG | - | chr6.1:68991581-68991600 | MS.gene57831:intron | 35.0% |
| !! | AAAAGAGCAAGTATTGAAGC+AGG | + | chr6.1:68992256-68992275 | None:intergenic | 35.0% |
| !! | GATAGGGTTGATACTTTCTT+AGG | - | chr6.1:68992325-68992344 | MS.gene57831:CDS | 35.0% |
| !! | TGATATGTGGTGATGGAATA+TGG | - | chr6.1:68992224-68992243 | MS.gene57831:CDS | 35.0% |
| !! | TTTTTCCTGTTGCTATTCCA+AGG | + | chr6.1:68988410-68988429 | None:intergenic | 35.0% |
| !!! | AGTTGACAATGGTTTTGAGT+TGG | - | chr6.1:68987070-68987089 | MS.gene57831:CDS | 35.0% |
| !!! | GAAAATGGCTAGTTTTCCAT+AGG | + | chr6.1:68991639-68991658 | None:intergenic | 35.0% |
| !!! | TCTTCTGGAATTGCTTTTAG+TGG | - | chr6.1:68987461-68987480 | MS.gene57831:CDS | 35.0% |
| AAATTCCCTCATAAGGCAAC+CGG | + | chr6.1:68989091-68989110 | None:intergenic | 40.0% | |
| AAGAACTTCATGCAAATGGG+AGG | + | chr6.1:68992289-68992308 | None:intergenic | 40.0% | |
| ACTAGTGTCTGAGGATTGAT+TGG | + | chr6.1:68989727-68989746 | None:intergenic | 40.0% | |
| ACTTCCAACACACATGTCAA+TGG | + | chr6.1:68992131-68992150 | None:intergenic | 40.0% | |
| AGCAACCTTCAAGGAATTCA+AGG | - | chr6.1:68991013-68991032 | MS.gene57831:intron | 40.0% | |
| AGCGACGCAATATCAATCTA+GGG | - | chr6.1:68989245-68989264 | MS.gene57831:intron | 40.0% | |
| AGTTGTATAGACCATCTCCA+AGG | + | chr6.1:68991277-68991296 | None:intergenic | 40.0% | |
| ATCTGTTAGTCCACAACCAT+AGG | + | chr6.1:68991600-68991619 | None:intergenic | 40.0% | |
| CAAAGCATGAGGCAATTATC+CGG | + | chr6.1:68991986-68992005 | None:intergenic | 40.0% | |
| CAAAGCATGTAGCGAAACAA+TGG | + | chr6.1:68989284-68989303 | None:intergenic | 40.0% | |
| CAACAATTTCACTTGCTTCC+TGG | + | chr6.1:68990530-68990549 | None:intergenic | 40.0% | |
| CACCACTAGATCAACCAAAA+TGG | + | chr6.1:68988690-68988709 | None:intergenic | 40.0% | |
| CAGGAAGCAAGTGAAATTGT+TGG | - | chr6.1:68990528-68990547 | MS.gene57831:intron | 40.0% | |
| CATTGGTACAAAAAAGGCCT+TGG | - | chr6.1:68990986-68991005 | MS.gene57831:intron | 40.0% | |
| CCAAATAATCGGCACAACAA+TGG | - | chr6.1:68991817-68991836 | MS.gene57831:intron | 40.0% | |
| CCACTAATTGCAAACCATGT+AGG | + | chr6.1:68991461-68991480 | None:intergenic | 40.0% | |
| CTTGTATGAACAGGAGGATT+TGG | - | chr6.1:68989669-68989688 | MS.gene57831:CDS | 40.0% | |
| GAAGATAGGGTAGTTGACAA+TGG | - | chr6.1:68987059-68987078 | MS.gene57831:CDS | 40.0% | |
| GAGGGTCATTGGTACAAAAA+AGG | - | chr6.1:68990980-68990999 | MS.gene57831:intron | 40.0% | |
| GATTCACTTGTATGAACAGG+AGG | - | chr6.1:68989663-68989682 | MS.gene57831:CDS | 40.0% | |
| GCAATAGCACTCTAGTATAG+CGG | - | chr6.1:68989436-68989455 | MS.gene57831:intron | 40.0% | |
| GCAATTATCCATCCCAACTT+TGG | + | chr6.1:68989762-68989781 | None:intergenic | 40.0% | |
| GCATTGCAAAATGCTAAGGT+TGG | + | chr6.1:68991578-68991597 | None:intergenic | 40.0% | |
| GCTTCCTGGAAAAGTAGAAA+AGG | + | chr6.1:68990516-68990535 | None:intergenic | 40.0% | |
| GGAAAAGGGCTGTTGTATTA+TGG | - | chr6.1:68987752-68987771 | MS.gene57831:CDS | 40.0% | |
| GGAAAAGGTTGACAAGGTTA+AGG | - | chr6.1:68992168-68992187 | MS.gene57831:CDS | 40.0% | |
| GGTGCTAACTCATACCTTAT+TGG | - | chr6.1:68991304-68991323 | MS.gene57831:intron | 40.0% | |
| GTACTAACAACGTGACTATG+TGG | - | chr6.1:68990133-68990152 | MS.gene57831:intron | 40.0% | |
| GTCAAGGTCCACAAATGATA+GGG | - | chr6.1:68992309-68992328 | MS.gene57831:CDS | 40.0% | |
| GTGATCAATGTTGTCAATCG+CGG | + | chr6.1:68989490-68989509 | None:intergenic | 40.0% | |
| GTGTCACATCATTGTCTAAC+AGG | + | chr6.1:68989952-68989971 | None:intergenic | 40.0% | |
| TAACAACGTGACTATGTGGA+TGG | - | chr6.1:68990137-68990156 | MS.gene57831:intron | 40.0% | |
| TAAGATAACTCAGGACTCGA+GGG | + | chr6.1:68991395-68991414 | None:intergenic | 40.0% | |
| TAGCGACGCAATATCAATCT+AGG | - | chr6.1:68989244-68989263 | MS.gene57831:intron | 40.0% | |
| TCACGTTGTTAGTACATTGG+TGG | + | chr6.1:68990128-68990147 | None:intergenic | 40.0% | |
| TCTTGGTATAAGCTGAACCA+TGG | + | chr6.1:68988494-68988513 | None:intergenic | 40.0% | |
| TGAATTCCTTGAAGGTTGCT+GGG | + | chr6.1:68991013-68991032 | None:intergenic | 40.0% | |
| TGGGTTTGTATAGTCAACTC+CGG | - | chr6.1:68991324-68991343 | MS.gene57831:intron | 40.0% | |
| TGTCAAGGTCCACAAATGAT+AGG | - | chr6.1:68992308-68992327 | MS.gene57831:CDS | 40.0% | |
| TGTTTGGGAAAAGGTTGACA+AGG | - | chr6.1:68992162-68992181 | MS.gene57831:CDS | 40.0% | |
| TTAAGGATCCAAAGTTGGGA+TGG | - | chr6.1:68989751-68989770 | MS.gene57831:intron | 40.0% | |
| TTCTGTCAGGATTAGAACTC+GGG | - | chr6.1:68987810-68987829 | MS.gene57831:CDS | 40.0% | |
| TTCTTTCTTGGGGAGTAATG+TGG | - | chr6.1:68990939-68990958 | MS.gene57831:intron | 40.0% | |
| TTGAATTCCTTGAAGGTTGC+TGG | + | chr6.1:68991014-68991033 | None:intergenic | 40.0% | |
| TTGCGGTACACAATTGCATA+GGG | + | chr6.1:68991926-68991945 | None:intergenic | 40.0% | |
| TTGCTGTATTCTTCTTGAGG+AGG | - | chr6.1:68989024-68989043 | MS.gene57831:CDS | 40.0% | |
| TTGTCAACTAACGGCTATAG+TGG | - | chr6.1:68989316-68989335 | MS.gene57831:intron | 40.0% | |
| TTTAGTTGAGGGAAGATGTG+CGG | + | chr6.1:68991521-68991540 | None:intergenic | 40.0% | |
| TTTCAAGCCTTCCCTTCATT+AGG | - | chr6.1:68990622-68990641 | MS.gene57831:intron | 40.0% | |
| TTTGAGTCCTAATGAAGGGA+AGG | + | chr6.1:68990632-68990651 | None:intergenic | 40.0% | |
| TTTGCCATTGACATGTGTGT+TGG | - | chr6.1:68992124-68992143 | MS.gene57831:CDS | 40.0% | |
| ! | ACTTGTGTTGTTGCTTCTTC+TGG | - | chr6.1:68987446-68987465 | MS.gene57831:CDS | 40.0% |
| ! | ATGGTTGTGGACTAACAGAT+TGG | - | chr6.1:68991600-68991619 | MS.gene57831:intron | 40.0% |
| ! | ATTCTCTCTGGTGCCAATTT+CGG | - | chr6.1:68988759-68988778 | MS.gene57831:CDS | 40.0% |
| ! | CAATCTAGGGTAGCAGAATT+TGG | - | chr6.1:68989258-68989277 | MS.gene57831:intron | 40.0% |
| ! | CAGTGGTTACTTTGCTAGTT+TGG | + | chr6.1:68990414-68990433 | None:intergenic | 40.0% |
| ! | CATTTTCTCAATCGGAGCAT+GGG | - | chr6.1:68991652-68991671 | MS.gene57831:intron | 40.0% |
| ! | CCTACATGGTTTGCAATTAG+TGG | - | chr6.1:68991458-68991477 | MS.gene57831:intron | 40.0% |
| ! | CCTCCTGTTTTATGGGAAAA+GGG | - | chr6.1:68987738-68987757 | MS.gene57831:CDS | 40.0% |
| ! | CTTTTATGTGTTCCTAGGTC+AGG | + | chr6.1:68991890-68991909 | None:intergenic | 40.0% |
| ! | GATTAAGGATTCGGTTGGTA+AGG | - | chr6.1:68992042-68992061 | MS.gene57831:CDS | 40.0% |
| ! | GGTCTTAGTTTGATTCTCTC+TGG | - | chr6.1:68988747-68988766 | MS.gene57831:CDS | 40.0% |
| ! | GTGTTGCTGTATTCTTCTTG+AGG | - | chr6.1:68989021-68989040 | MS.gene57831:CDS | 40.0% |
| ! | GTTAACTGATTCCTCCATGA+TGG | + | chr6.1:68987218-68987237 | None:intergenic | 40.0% |
| ! | TACAAAGCATTTCCTGACCT+AGG | - | chr6.1:68991875-68991894 | MS.gene57831:intron | 40.0% |
| ! | TCCTCCTGTTTTATGGGAAA+AGG | - | chr6.1:68987737-68987756 | MS.gene57831:CDS | 40.0% |
| ! | TCTGGTTTGATATGTGGTGA+TGG | - | chr6.1:68992217-68992236 | MS.gene57831:CDS | 40.0% |
| ! | TGTCTGGAATATATGAGCCT+TGG | - | chr6.1:68988390-68988409 | MS.gene57831:CDS | 40.0% |
| ! | TTTTCCATAGGTCGATGCTA+GGG | + | chr6.1:68991627-68991646 | None:intergenic | 40.0% |
| ! | TTTTGCAATGCCTATGGTTG+TGG | - | chr6.1:68991587-68991606 | MS.gene57831:intron | 40.0% |
| !! | AAAGGTATTGCCATAGCCAT+TGG | + | chr6.1:68992088-68992107 | None:intergenic | 40.0% |
| !! | ACCATCCGATATTGATTCAG+CGG | - | chr6.1:68990102-68990121 | MS.gene57831:intron | 40.0% |
| !! | CCATTGTTGTGCCGATTATT+TGG | + | chr6.1:68991820-68991839 | None:intergenic | 40.0% |
| !! | GGTCAATGATTGTTTCTGTC+AGG | - | chr6.1:68987797-68987816 | MS.gene57831:CDS | 40.0% |
| !! | GTTGCTTCTGGTTTGATATG+TGG | - | chr6.1:68992211-68992230 | MS.gene57831:CDS | 40.0% |
| !!! | AATGTCTCTGCTGGTCTTTT+GGG | - | chr6.1:68987332-68987351 | MS.gene57831:CDS | 40.0% |
| !!! | ACCCATTTTGGTTGATCTAG+TGG | - | chr6.1:68988685-68988704 | MS.gene57831:intron | 40.0% |
| !!! | TAATGTCTCTGCTGGTCTTT+TGG | - | chr6.1:68987331-68987350 | MS.gene57831:CDS | 40.0% |
| AATTCCCTCATAAGGCAACC+GGG | + | chr6.1:68989090-68989109 | None:intergenic | 45.0% | |
| AGAAAAAATCGTTGTGGCGG+CGG | + | chr6.1:68988879-68988898 | None:intergenic | 45.0% | |
| ATAGCCATAGCCATGATCCT+TGG | - | chr6.1:68991257-68991276 | MS.gene57831:intron | 45.0% | |
| ATAGCCATGATCCTTGGAGA+TGG | - | chr6.1:68991263-68991282 | MS.gene57831:intron | 45.0% | |
| ATCAAACCAGAAGCAACAGC+AGG | + | chr6.1:68992208-68992227 | None:intergenic | 45.0% | |
| ATCTCCAAGGATCATGGCTA+TGG | + | chr6.1:68991264-68991283 | None:intergenic | 45.0% | |
| ATGAGCCTTGGAATAGCAAC+AGG | - | chr6.1:68988402-68988421 | MS.gene57831:CDS | 45.0% | |
| ATGCTAAGGTTGGAGCAATC+AGG | + | chr6.1:68991568-68991587 | None:intergenic | 45.0% | |
| ATTGCCATAGCCATTGGAAG+TGG | + | chr6.1:68992082-68992101 | None:intergenic | 45.0% | |
| ATTGCTGTGTTGGGCTATGA+GGG | + | chr6.1:68988987-68989006 | None:intergenic | 45.0% | |
| CATACCACTTCCAATGGCTA+TGG | - | chr6.1:68992075-68992094 | MS.gene57831:CDS | 45.0% | |
| CCAGCAGAGACATTAAGTGA+AGG | + | chr6.1:68987326-68987345 | None:intergenic | 45.0% | |
| CCATGCTCCGATTGAGAAAA+TGG | + | chr6.1:68991654-68991673 | None:intergenic | 45.0% | |
| CCTCTCATAGAAACCAGAGA+GGG | - | chr6.1:68990962-68990981 | MS.gene57831:intron | 45.0% | |
| CCTTCACTTAATGTCTCTGC+TGG | - | chr6.1:68987323-68987342 | MS.gene57831:CDS | 45.0% | |
| CCTTGGAGGAGTTCTTTCTT+GGG | - | chr6.1:68990928-68990947 | MS.gene57831:intron | 45.0% | |
| CTAAAGAGGAACACACTCCA+AGG | + | chr6.1:68988728-68988747 | None:intergenic | 45.0% | |
| CTCAGTTGTGCCTCTTAGAA+AGG | - | chr6.1:68989815-68989834 | MS.gene57831:intron | 45.0% | |
| CTGCAGAACTCAATGGTGTA+AGG | + | chr6.1:68991231-68991250 | None:intergenic | 45.0% | |
| CTGTATTCTTCTTGAGGAGG+AGG | - | chr6.1:68989027-68989046 | MS.gene57831:CDS | 45.0% | |
| CTTACACCATTGAGTTCTGC+AGG | - | chr6.1:68991229-68991248 | MS.gene57831:intron | 45.0% | |
| CTTGGAGGAGTTCTTTCTTG+GGG | - | chr6.1:68990929-68990948 | MS.gene57831:intron | 45.0% | |
| CTTGGAGTGTGTTCCTCTTT+AGG | - | chr6.1:68988726-68988745 | MS.gene57831:intron | 45.0% | |
| GAGGTTCATACCACTTCCAA+TGG | - | chr6.1:68992069-68992088 | MS.gene57831:CDS | 45.0% | |
| GATGTTCATCATGACTCCAC+AGG | + | chr6.1:68991717-68991736 | None:intergenic | 45.0% | |
| GGGTTTGTATAGTCAACTCC+GGG | - | chr6.1:68991325-68991344 | MS.gene57831:intron | 45.0% | |
| GGTTCTATACAGCTGCTGAT+GGG | - | chr6.1:68990593-68990612 | MS.gene57831:intron | 45.0% | |
| GTAAGATAACTCAGGACTCG+AGG | + | chr6.1:68991396-68991415 | None:intergenic | 45.0% | |
| GTTGCGGTACACAATTGCAT+AGG | + | chr6.1:68991927-68991946 | None:intergenic | 45.0% | |
| TAGAAACCAGAGAGGGTCAT+TGG | - | chr6.1:68990969-68990988 | MS.gene57831:intron | 45.0% | |
| TAGACCATCTCCAAGGATCA+TGG | + | chr6.1:68991270-68991289 | None:intergenic | 45.0% | |
| TATCTTACGATGATCAGCGC+CGG | - | chr6.1:68991408-68991427 | MS.gene57831:intron | 45.0% | |
| TATTGCTGTGTTGGGCTATG+AGG | + | chr6.1:68988988-68989007 | None:intergenic | 45.0% | |
| TCCTTGGAGGAGTTCTTTCT+TGG | - | chr6.1:68990927-68990946 | MS.gene57831:intron | 45.0% | |
| TCTAACAGGCAATGACGTGT+TGG | + | chr6.1:68989938-68989957 | None:intergenic | 45.0% | |
| TGCAATTGTGTACCGCAACA+TGG | - | chr6.1:68991928-68991947 | MS.gene57831:CDS | 45.0% | |
| TGGGTCAAGACATTGGGTTT+AGG | + | chr6.1:68988949-68988968 | None:intergenic | 45.0% | |
| TTCTTCTCTACGTATCTCGG+CGG | - | chr6.1:68988895-68988914 | MS.gene57831:intron | 45.0% | |
| TTGGTATCACATATCTGCCC+CGG | - | chr6.1:68989069-68989088 | MS.gene57831:intron | 45.0% | |
| TTTGGTTGATCTAGTGGTGC+TGG | - | chr6.1:68988691-68988710 | MS.gene57831:intron | 45.0% | |
| TTTGTACCAATGACCCTCTC+TGG | + | chr6.1:68990978-68990997 | None:intergenic | 45.0% | |
| ! | ACTAGGTTGGGTCAAGACAT+TGG | + | chr6.1:68988956-68988975 | None:intergenic | 45.0% |
| ! | ATGTTGTCAATCGCGGATTG+AGG | + | chr6.1:68989483-68989502 | None:intergenic | 45.0% |
| ! | CAGCCCTTTTCCCATAAAAC+AGG | + | chr6.1:68987744-68987763 | None:intergenic | 45.0% |
| ! | CCATTTTCTCAATCGGAGCA+TGG | - | chr6.1:68991651-68991670 | MS.gene57831:intron | 45.0% |
| ! | CCCTTTTCCCATAAAACAGG+AGG | + | chr6.1:68987741-68987760 | None:intergenic | 45.0% |
| ! | CTAGGTTGGGTCAAGACATT+GGG | + | chr6.1:68988955-68988974 | None:intergenic | 45.0% |
| ! | GAGGGGTTTAGTGTTGAACT+TGG | - | chr6.1:68988055-68988074 | MS.gene57831:CDS | 45.0% |
| ! | GTTTTCCATAGGTCGATGCT+AGG | + | chr6.1:68991628-68991647 | None:intergenic | 45.0% |
| ! | TGGTTCTATACAGCTGCTGA+TGG | - | chr6.1:68990592-68990611 | MS.gene57831:intron | 45.0% |
| ! | TTTGCTAGTTTGGCTCCTTG+AGG | + | chr6.1:68990404-68990423 | None:intergenic | 45.0% |
| !! | AAGGATTCGGTTGGTAAGGT+AGG | - | chr6.1:68992046-68992065 | MS.gene57831:CDS | 45.0% |
| !! | AGAGATTACGAAGCATCGAC+CGG | + | chr6.1:68990251-68990270 | None:intergenic | 45.0% |
| !! | AGGATTCGGTTGGTAAGGTA+GGG | - | chr6.1:68992047-68992066 | MS.gene57831:CDS | 45.0% |
| !! | TTTATATTTAATTAATAGTT+TGG | - | chr6.1:68988649-68988668 | MS.gene57831:intron | 5.0% |
| AACAGCTTCCACACTCCTCA+AGG | - | chr6.1:68990386-68990405 | MS.gene57831:intron | 50.0% | |
| ACACAATTGCATAGGGCGCA+GGG | + | chr6.1:68991919-68991938 | None:intergenic | 50.0% | |
| AGAGATGTCAACGTGACAGC+TGG | - | chr6.1:68988826-68988845 | MS.gene57831:CDS | 50.0% | |
| AGATGTCAACGTGACAGCTG+GGG | - | chr6.1:68988828-68988847 | MS.gene57831:CDS | 50.0% | |
| ATGGCGATACTCGGAGTACA+AGG | - | chr6.1:68991947-68991966 | MS.gene57831:CDS | 50.0% | |
| ATTCCCTCATAAGGCAACCG+GGG | + | chr6.1:68989089-68989108 | None:intergenic | 50.0% | |
| ATTCTTTGGCGCAGCGATTG+TGG | - | chr6.1:68992012-68992031 | MS.gene57831:CDS | 50.0% | |
| CCCAAGAAAGAACTCCTCCA+AGG | + | chr6.1:68990931-68990950 | None:intergenic | 50.0% | |
| GAGATGTCAACGTGACAGCT+GGG | - | chr6.1:68988827-68988846 | MS.gene57831:CDS | 50.0% | |
| GCCGCTGAATCAATATCGGA+TGG | + | chr6.1:68990106-68990125 | None:intergenic | 50.0% | |
| GCCTCTCATAGAAACCAGAG+AGG | - | chr6.1:68990961-68990980 | MS.gene57831:intron | 50.0% | |
| GGTGGCCGCTGAATCAATAT+CGG | + | chr6.1:68990110-68990129 | None:intergenic | 50.0% | |
| TACACAATTGCATAGGGCGC+AGG | + | chr6.1:68991920-68991939 | None:intergenic | 50.0% | |
| TACCGCAACATGGCGATACT+CGG | - | chr6.1:68991938-68991957 | MS.gene57831:CDS | 50.0% | |
| TCAACTCCGGGACAAACGAA+GGG | - | chr6.1:68991337-68991356 | MS.gene57831:intron | 50.0% | |
| TCGTGCTTGACTGTATTCGG+TGG | - | chr6.1:68991101-68991120 | MS.gene57831:intron | 50.0% | |
| TGAGCAGTTGCAGTACCACT+TGG | + | chr6.1:68990359-68990378 | None:intergenic | 50.0% | |
| TGTCTTGACCCAACCTAGTG+AGG | - | chr6.1:68988957-68988976 | MS.gene57831:intron | 50.0% | |
| TTGCTGTGTTGGGCTATGAG+GGG | + | chr6.1:68988986-68989005 | None:intergenic | 50.0% | |
| ! | CCCTCTCTGGTTTCTATGAG+AGG | + | chr6.1:68990965-68990984 | None:intergenic | 50.0% |
| ! | GCTTGACTGTATTCGGTGGA+TGG | - | chr6.1:68991105-68991124 | MS.gene57831:intron | 50.0% |
| ! | TATACAGCTGCTGATGGGTG+TGG | - | chr6.1:68990598-68990617 | MS.gene57831:intron | 50.0% |
| ! | TTTGCACCTGCTGTTGCTTC+TGG | - | chr6.1:68992199-68992218 | MS.gene57831:CDS | 50.0% |
| !! | ATTCGGTTGGTAAGGTAGGG+AGG | - | chr6.1:68992050-68992069 | MS.gene57831:CDS | 50.0% |
| ACCTTACCCTGGCTTCACCA+CGG | - | chr6.1:68991780-68991799 | MS.gene57831:intron | 55.0% | |
| AGGGAAGATGTGCGGCAATG+TGG | + | chr6.1:68991513-68991532 | None:intergenic | 55.0% | |
| AGGGGGAACCTCACTAGGTT+GGG | + | chr6.1:68988968-68988987 | None:intergenic | 55.0% | |
| CAAAACCGGCTACCTTACCC+TGG | - | chr6.1:68991769-68991788 | MS.gene57831:intron | 55.0% | |
| CATCTGCCCTTCGTTTGTCC+CGG | + | chr6.1:68991346-68991365 | None:intergenic | 55.0% | |
| CTATGAGGGGGAACCTCACT+AGG | + | chr6.1:68988973-68988992 | None:intergenic | 55.0% | |
| CTTGAAGGTTGCTGGGACCA+AGG | + | chr6.1:68991006-68991025 | None:intergenic | 55.0% | |
| CTTGGTCCCAGCAACCTTCA+AGG | - | chr6.1:68991004-68991023 | MS.gene57831:intron | 55.0% | |
| GGAGAGTCTTGATCCGCAAC+AGG | + | chr6.1:68991374-68991393 | None:intergenic | 55.0% | |
| GGCAGATGCTCTACCTGTTG+CGG | - | chr6.1:68991358-68991377 | MS.gene57831:intron | 55.0% | |
| GTCAACTCCGGGACAAACGA+AGG | - | chr6.1:68991336-68991355 | MS.gene57831:intron | 55.0% | |
| TCTTCTTGAGGAGGAGGACC+CGG | - | chr6.1:68989033-68989052 | MS.gene57831:CDS | 55.0% | |
| TGAAGCCAGGGTAAGGTAGC+CGG | + | chr6.1:68991777-68991796 | None:intergenic | 55.0% | |
| TGCTGTGTTGGGCTATGAGG+GGG | + | chr6.1:68988985-68989004 | None:intergenic | 55.0% | |
| TGGCTCACAAACATGGACCG+TGG | + | chr6.1:68991800-68991819 | None:intergenic | 55.0% | |
| TTCTCAATCGGAGCATGGGC+TGG | - | chr6.1:68991656-68991675 | MS.gene57831:intron | 55.0% | |
| ! | CTCCGAGTATCGCCATGTTG+CGG | + | chr6.1:68991943-68991962 | None:intergenic | 55.0% |
| ! | CTCTCTGGTGCCAATTTCGG+TGG | - | chr6.1:68988762-68988781 | MS.gene57831:CDS | 55.0% |
| ! | GTTTGGCTCCTTGAGGAGTG+TGG | + | chr6.1:68990397-68990416 | None:intergenic | 55.0% |
| !! | CTAGTGGTGCTGGCTTGCTT+GGG | - | chr6.1:68988701-68988720 | MS.gene57831:intron | 55.0% |
| !! | CTTGCTAGTCTTGCAGCCTG+TGG | - | chr6.1:68991698-68991717 | MS.gene57831:intron | 55.0% |
| !! | TCTAGTGGTGCTGGCTTGCT+TGG | - | chr6.1:68988700-68988719 | MS.gene57831:intron | 55.0% |
| !! | TGGTCCCTAGCATCGACCTA+TGG | - | chr6.1:68991620-68991639 | MS.gene57831:intron | 55.0% |
| ACATGGACCGTGGTGAAGCC+AGG | + | chr6.1:68991790-68991809 | None:intergenic | 60.0% | |
| ACCGTGGTGAAGCCAGGGTA+AGG | + | chr6.1:68991784-68991803 | None:intergenic | 60.0% | |
| CATGGACCGTGGTGAAGCCA+GGG | + | chr6.1:68991789-68991808 | None:intergenic | 60.0% | |
| CTGCCCCGGTTGCCTTATGA+GGG | - | chr6.1:68989083-68989102 | MS.gene57831:intron | 60.0% | |
| GAGGGGGAACCTCACTAGGT+TGG | + | chr6.1:68988969-68988988 | None:intergenic | 60.0% | |
| TCTGCCCCGGTTGCCTTATG+AGG | - | chr6.1:68989082-68989101 | MS.gene57831:intron | 60.0% | |
| TGTCAACGTGACAGCTGGGG+CGG | - | chr6.1:68988831-68988850 | MS.gene57831:CDS | 60.0% | |
| !! | GCATGGGCTGGTGCATCACA+TGG | - | chr6.1:68991668-68991687 | MS.gene57831:intron | 60.0% |
| !! | TGCTGGCTTGCTTGGGACCT+TGG | - | chr6.1:68988708-68988727 | MS.gene57831:intron | 60.0% |
| !! | TGGGCTGGTGCATCACATGG+TGG | - | chr6.1:68991671-68991690 | MS.gene57831:intron | 60.0% |
| GTCAACGTGACAGCTGGGGC+GGG | - | chr6.1:68988832-68988851 | MS.gene57831:CDS | 65.0% | |
| TCTTGAGGAGGAGGACCCGG+CGG | - | chr6.1:68989036-68989055 | MS.gene57831:CDS | 65.0% | |
| CTTGAGGAGGAGGACCCGGC+GGG | - | chr6.1:68989037-68989056 | MS.gene57831:CDS | 70.0% | |
| TACCAAGCCGCCTACCCCGC+CGG | + | chr6.1:68989055-68989074 | None:intergenic | 70.0% | |
| TTGAGGAGGAGGACCCGGCG+GGG | - | chr6.1:68989038-68989057 | MS.gene57831:CDS | 70.0% | |
| ACCAAGCCGCCTACCCCGCC+GGG | + | chr6.1:68989054-68989073 | None:intergenic | 75.0% | |
| ! | ACCCGGCGGGGTAGGCGGCT+TGG | - | chr6.1:68989050-68989069 | MS.gene57831:intron | 80.0% |
| ! | GGAGGACCCGGCGGGGTAGG+CGG | - | chr6.1:68989045-68989064 | MS.gene57831:CDS | 80.0% |
| ! | GGAGGAGGACCCGGCGGGGT+AGG | - | chr6.1:68989042-68989061 | MS.gene57831:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 68987038 | 68992354 | 68987038 | ID=MS.gene57831 |
| chr6.1 | mRNA | 68987038 | 68992354 | 68987038 | ID=MS.gene57831.t1;Parent=MS.gene57831 |
| chr6.1 | exon | 68991910 | 68992354 | 68991910 | ID=MS.gene57831.t1.exon1;Parent=MS.gene57831.t1 |
| chr6.1 | CDS | 68991910 | 68992354 | 68991910 | ID=cds.MS.gene57831.t1;Parent=MS.gene57831.t1 |
| chr6.1 | exon | 68989556 | 68989710 | 68989556 | ID=MS.gene57831.t1.exon2;Parent=MS.gene57831.t1 |
| chr6.1 | CDS | 68989556 | 68989710 | 68989556 | ID=cds.MS.gene57831.t1;Parent=MS.gene57831.t1 |
| chr6.1 | exon | 68988969 | 68989066 | 68988969 | ID=MS.gene57831.t1.exon3;Parent=MS.gene57831.t1 |
| chr6.1 | CDS | 68988969 | 68989066 | 68988969 | ID=cds.MS.gene57831.t1;Parent=MS.gene57831.t1 |
| chr6.1 | exon | 68988727 | 68988861 | 68988727 | ID=MS.gene57831.t1.exon4;Parent=MS.gene57831.t1 |
| chr6.1 | CDS | 68988727 | 68988861 | 68988727 | ID=cds.MS.gene57831.t1;Parent=MS.gene57831.t1 |
| chr6.1 | exon | 68988350 | 68988539 | 68988350 | ID=MS.gene57831.t1.exon5;Parent=MS.gene57831.t1 |
| chr6.1 | CDS | 68988350 | 68988539 | 68988350 | ID=cds.MS.gene57831.t1;Parent=MS.gene57831.t1 |
| chr6.1 | exon | 68987038 | 68988141 | 68987038 | ID=MS.gene57831.t1.exon6;Parent=MS.gene57831.t1 |
| chr6.1 | CDS | 68987038 | 68988141 | 68987038 | ID=cds.MS.gene57831.t1;Parent=MS.gene57831.t1 |
| Gene Sequence |
| Protein sequence |