Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37726.t1 | XP_003620154.1 | 95.7 | 714 | 25 | 2 | 1 | 710 | 1 | 712 | 0.00E+00 | 1349.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37726.t1 | Q9SHY2 | 73.8 | 669 | 166 | 4 | 46 | 708 | 20 | 685 | 6.8e-298 | 1024.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37726.t1 | G7KKB8 | 95.7 | 714 | 25 | 2 | 1 | 710 | 1 | 712 | 0.0e+00 | 1349.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05216 | MS.gene37726 | 0.879496 | 1.19E-69 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene37726 | MS.gene017121 | PPI |
| MS.gene37726 | MS.gene049640 | PPI |
| MS.gene008379 | MS.gene37726 | PPI |
| MS.gene030050 | MS.gene37726 | PPI |
| MS.gene37726 | MS.gene038353 | PPI |
| MS.gene37726 | MS.gene05063 | PPI |
| MS.gene37726 | MS.gene049646 | PPI |
| MS.gene049639 | MS.gene37726 | PPI |
| MS.gene008380 | MS.gene37726 | PPI |
| MS.gene55668 | MS.gene37726 | PPI |
| MS.gene37726 | MS.gene017120 | PPI |
| MS.gene049642 | MS.gene37726 | PPI |
| MS.gene37726 | MS.gene05068 | PPI |
| MS.gene05062 | MS.gene37726 | PPI |
| MS.gene37726 | MS.gene05066 | PPI |
| MS.gene05072 | MS.gene37726 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37726.t1 | MTR_6g077870 | 97.059 | 714 | 15 | 3 | 1 | 710 | 1 | 712 | 0.0 | 1410 |
| MS.gene37726.t1 | MTR_6g077870 | 97.822 | 551 | 12 | 0 | 160 | 710 | 1 | 551 | 0.0 | 1105 |
| MS.gene37726.t1 | MTR_5g091600 | 72.459 | 679 | 181 | 3 | 34 | 708 | 4 | 680 | 0.0 | 1002 |
| MS.gene37726.t1 | MTR_3g063490 | 69.899 | 691 | 199 | 4 | 25 | 708 | 6 | 694 | 0.0 | 982 |
| MS.gene37726.t1 | MTR_3g063520 | 70.672 | 699 | 187 | 5 | 16 | 710 | 6 | 690 | 0.0 | 949 |
| MS.gene37726.t1 | MTR_7g028250 | 57.609 | 644 | 259 | 7 | 61 | 695 | 35 | 673 | 0.0 | 771 |
| MS.gene37726.t1 | MTR_3g092090 | 53.134 | 670 | 296 | 7 | 33 | 695 | 5 | 663 | 0.0 | 752 |
| MS.gene37726.t1 | MTR_3g092090 | 52.879 | 660 | 293 | 7 | 33 | 685 | 5 | 653 | 0.0 | 735 |
| MS.gene37726.t1 | MTR_1g007580 | 50.808 | 681 | 311 | 9 | 31 | 698 | 3 | 672 | 0.0 | 724 |
| MS.gene37726.t1 | MTR_0312s0020 | 50.512 | 683 | 311 | 8 | 27 | 698 | 6 | 672 | 0.0 | 723 |
| MS.gene37726.t1 | MTR_1g007540 | 50.512 | 683 | 311 | 8 | 27 | 698 | 6 | 672 | 0.0 | 723 |
| MS.gene37726.t1 | MTR_1g077840 | 51.326 | 641 | 297 | 7 | 64 | 697 | 47 | 679 | 0.0 | 711 |
| MS.gene37726.t1 | MTR_1626s0010 | 47.917 | 240 | 120 | 2 | 236 | 475 | 1 | 235 | 9.89e-80 | 254 |
| MS.gene37726.t1 | MTR_5g091615 | 69.565 | 161 | 48 | 1 | 548 | 707 | 59 | 219 | 2.05e-68 | 226 |
| MS.gene37726.t1 | MTR_0312s0050 | 45.669 | 127 | 56 | 3 | 27 | 149 | 6 | 123 | 7.18e-31 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37726.t1 | AT1G65730 | 71.449 | 697 | 181 | 5 | 18 | 708 | 1 | 685 | 0.0 | 1043 |
| MS.gene37726.t1 | AT3G17650 | 71.693 | 703 | 191 | 4 | 13 | 708 | 9 | 710 | 0.0 | 1009 |
| MS.gene37726.t1 | AT3G17650 | 71.693 | 703 | 191 | 4 | 13 | 708 | 9 | 710 | 0.0 | 1009 |
| MS.gene37726.t1 | AT1G48370 | 71.067 | 712 | 190 | 4 | 13 | 708 | 9 | 720 | 0.0 | 1009 |
| MS.gene37726.t1 | AT1G48370 | 72.890 | 557 | 143 | 3 | 160 | 708 | 1 | 557 | 0.0 | 821 |
| MS.gene37726.t1 | AT3G27020 | 58.584 | 664 | 262 | 7 | 40 | 695 | 12 | 670 | 0.0 | 791 |
| MS.gene37726.t1 | AT5G41000 | 56.899 | 645 | 263 | 7 | 61 | 695 | 28 | 667 | 0.0 | 749 |
| MS.gene37726.t1 | AT5G53550 | 51.524 | 689 | 299 | 8 | 18 | 696 | 6 | 669 | 0.0 | 746 |
| MS.gene37726.t1 | AT5G53550 | 51.524 | 689 | 299 | 8 | 18 | 696 | 6 | 669 | 0.0 | 746 |
| MS.gene37726.t1 | AT5G53550 | 51.524 | 689 | 299 | 8 | 18 | 696 | 6 | 669 | 0.0 | 746 |
| MS.gene37726.t1 | AT5G53550 | 51.524 | 689 | 299 | 8 | 18 | 696 | 6 | 669 | 0.0 | 746 |
| MS.gene37726.t1 | AT5G53550 | 51.524 | 689 | 299 | 8 | 18 | 696 | 6 | 669 | 0.0 | 746 |
| MS.gene37726.t1 | AT4G24120 | 52.199 | 682 | 297 | 8 | 34 | 697 | 2 | 672 | 0.0 | 739 |
| MS.gene37726.t1 | AT5G24380 | 52.574 | 641 | 292 | 5 | 62 | 695 | 25 | 660 | 0.0 | 724 |
| MS.gene37726.t1 | AT5G41000 | 54.574 | 645 | 253 | 7 | 61 | 695 | 28 | 642 | 0.0 | 708 |
| MS.gene37726.t1 | AT5G53550 | 55.426 | 516 | 220 | 4 | 182 | 696 | 1 | 507 | 0.0 | 612 |
| MS.gene37726.t1 | AT5G41000 | 56.653 | 496 | 206 | 6 | 204 | 695 | 1 | 491 | 0.0 | 578 |
| MS.gene37726.t1 | AT5G45450 | 66.972 | 218 | 65 | 2 | 492 | 708 | 1 | 212 | 3.10e-99 | 304 |
Find 162 sgRNAs with CRISPR-Local
Find 367 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTGTGTTGTTGCTTCTTC+TGG | 0.151174 | 6.3:-71899645 | MS.gene37726:CDS |
| ATGGCAATACCTTTCTATTT+AGG | 0.166528 | 6.3:-71895055 | MS.gene37726:CDS |
| TAATGTCTCTGCTGGTCTTT+TGG | 0.168239 | 6.3:-71899760 | MS.gene37726:CDS |
| TAATTTCACCTTGTGTCTTT+TGG | 0.182441 | 6.3:-71895303 | MS.gene37726:CDS |
| GGTGCTAACTCATACCTTAT+TGG | 0.192771 | 6.3:-71895845 | MS.gene37726:CDS |
| TCCTTGGAGGAGTTCTTTCT+TGG | 0.198308 | 6.3:-71896221 | MS.gene37726:CDS |
| TCTTCAGTTTCAGCTTCTTA+TGG | 0.208576 | 6.3:-71896591 | MS.gene37726:CDS |
| CCATTGTTGTGCCGATTATT+TGG | 0.212463 | 6.3:+71895332 | None:intergenic |
| GATAGGGTTGATACTTTCTT+AGG | 0.214363 | 6.3:-71894824 | MS.gene37726:CDS |
| CTTGTATGAACAGGAGGATT+TGG | 0.238454 | 6.3:-71897507 | MS.gene37726:intron |
| TTTGCACCTGCTGTTGCTTC+TGG | 0.245860 | 6.3:-71894950 | MS.gene37726:CDS |
| ATGCTTTGTTATATATTCTT+TGG | 0.249346 | 6.3:-71895151 | MS.gene37726:CDS |
| CCACGCTCCGATTGAGAAAA+TGG | 0.260199 | 6.3:+71895498 | None:intergenic |
| GTATTCTCTTGTCTAGTAAA+AGG | 0.283358 | 6.3:+71899678 | None:intergenic |
| GATTGTGGTAAACTTGATTA+AGG | 0.288358 | 6.3:-71895122 | MS.gene37726:CDS |
| CCTTGGAGGAGTTCTTTCTT+GGG | 0.290700 | 6.3:-71896220 | MS.gene37726:CDS |
| AAGTGGTTACTTTGCTAGTT+TGG | 0.294157 | 6.3:+71896727 | None:intergenic |
| GTGCTAACTCATACCTTATT+GGG | 0.296695 | 6.3:-71895844 | MS.gene37726:CDS |
| CTTCAGTTTCAGCTTCTTAT+GGG | 0.309574 | 6.3:-71896590 | MS.gene37726:CDS |
| GGATTTGGGAGTTACCTATT+TGG | 0.309829 | 6.3:-71897492 | MS.gene37726:CDS |
| ACATCTTCCCTCAACTAAAA+TGG | 0.319301 | 6.3:-71895627 | MS.gene37726:CDS |
| ACTGATACGTTAATGATATA+TGG | 0.319321 | 6.3:+71896246 | None:intergenic |
| TCTTATGGGGTTTCTTTCAA+TGG | 0.329326 | 6.3:-71896576 | MS.gene37726:CDS |
| TGTCAAGGTCTACAAATGAT+AGG | 0.330341 | 6.3:-71894841 | MS.gene37726:CDS |
| GAAGTTTGATATTGTTTGTT+TGG | 0.332768 | 6.3:-71895003 | MS.gene37726:CDS |
| CCTACATGGTTTGCAATTAG+TGG | 0.333118 | 6.3:-71895691 | MS.gene37726:CDS |
| CAAATAATCGGCACAACAAT+GGG | 0.336116 | 6.3:-71895331 | MS.gene37726:CDS |
| TGATATGTGGTGATGGAATA+TGG | 0.339780 | 6.3:-71894925 | MS.gene37726:CDS |
| ACAAGGATTCAGTTCTTTAC+CGG | 0.358284 | 6.3:-71895185 | MS.gene37726:CDS |
| TTTCAAGCCTTCCCTTCATT+AGG | 0.370895 | 6.3:-71896526 | MS.gene37726:CDS |
| GGTAAACTTGATTAAGGATT+CGG | 0.378893 | 6.3:-71895116 | MS.gene37726:CDS |
| CTTTAAGAAAGAGTTGTTTC+CGG | 0.382437 | 6.3:+71895722 | None:intergenic |
| TTGTATGAACAGGAGGATTT+GGG | 0.383317 | 6.3:-71897506 | MS.gene37726:intron |
| TTGACTATACAAACCCAATA+AGG | 0.387419 | 6.3:+71895831 | None:intergenic |
| TTCAAGGAATCCAAGGTTAC+AGG | 0.397094 | 6.3:-71896128 | MS.gene37726:CDS |
| CTTATGCAAGATTTCAAAAC+CGG | 0.403681 | 6.3:-71895394 | MS.gene37726:CDS |
| AAGGATTCGGTTGGTAAGGT+AGG | 0.403845 | 6.3:-71895103 | MS.gene37726:CDS |
| ATAATAATGAGCATGAAGAT+AGG | 0.408695 | 6.3:-71900052 | MS.gene37726:CDS |
| CTCAGTTGTGCCTCTTAGAA+AGG | 0.409163 | 6.3:-71897361 | MS.gene37726:intron |
| CATGTTCACTCATACCAAAT+AGG | 0.417530 | 6.3:+71897478 | None:intergenic |
| CACATGTCAATGGCAAAATA+AGG | 0.417542 | 6.3:+71895031 | None:intergenic |
| AAGTTTGATATTGTTTGTTT+GGG | 0.419735 | 6.3:-71895002 | MS.gene37726:CDS |
| GTTGCTTCTGGTTTGATATG+TGG | 0.420440 | 6.3:-71894938 | MS.gene37726:CDS |
| ACATGGATCGCGGCGAAGCC+AGG | 0.421156 | 6.3:+71895362 | None:intergenic |
| GACAAGAACTTCATGCAAAT+AGG | 0.424104 | 6.3:+71894860 | None:intergenic |
| CAGGAAGCAAGTGAAATTGT+TGG | 0.441495 | 6.3:-71896620 | MS.gene37726:CDS |
| GATATTGTTTGTTTGGGAAA+AGG | 0.445126 | 6.3:-71894996 | MS.gene37726:CDS |
| TTCTCAATCGGAGCGTGGGC+TGG | 0.448663 | 6.3:-71895493 | MS.gene37726:CDS |
| TGAAACTTACCCTGTAACCT+TGG | 0.450447 | 6.3:+71896118 | None:intergenic |
| TATACAGCTGCTGATGGGTG+TGG | 0.451437 | 6.3:-71896550 | MS.gene37726:CDS |
| TGTAACCTTGGATTCCTTGA+AGG | 0.452577 | 6.3:+71896130 | None:intergenic |
| AGGAAGCAAGTGAAATTGTT+GGG | 0.453448 | 6.3:-71896619 | MS.gene37726:CDS |
| TAGAAACAAGAGAGGGTCAT+TGG | 0.458945 | 6.3:-71896179 | MS.gene37726:CDS |
| GCAATTATCCATCCCAACTT+AGG | 0.467065 | 6.3:+71897417 | None:intergenic |
| CCAAATAATCGGCACAACAA+TGG | 0.467718 | 6.3:-71895332 | MS.gene37726:CDS |
| CCTTCACTTAATGTCTCTGC+TGG | 0.473944 | 6.3:-71899768 | MS.gene37726:CDS |
| AGCACTTATTAGTACCATCA+TGG | 0.474614 | 6.3:-71899890 | MS.gene37726:CDS |
| TTCTACACTTTATATTGGTG+TGG | 0.475325 | 6.3:-71896280 | MS.gene37726:CDS |
| ATGTTTGTGAGCCAAATAAT+CGG | 0.476829 | 6.3:-71895343 | MS.gene37726:CDS |
| AACGTATCAGTTCTCCTTGG+AGG | 0.480530 | 6.3:-71896234 | MS.gene37726:CDS |
| TGGTCTATACAACTTTGTTA+AGG | 0.481791 | 6.3:-71895866 | MS.gene37726:CDS |
| GATTATTTGGCTCACAAACA+TGG | 0.485265 | 6.3:+71895345 | None:intergenic |
| GGAGAGTCTTGATCCGCAAC+AGG | 0.487808 | 6.3:+71895778 | None:intergenic |
| CTTGGTGACAGCGACCTTCA+AGG | 0.488010 | 6.3:-71896144 | MS.gene37726:CDS |
| CTTGGAGGAGTTCTTTCTTG+GGG | 0.488944 | 6.3:-71896219 | MS.gene37726:CDS |
| CAAAGCATGAGGCAATTATC+CGG | 0.498117 | 6.3:+71895166 | None:intergenic |
| CCCTCTCTTGTTTCTATGAG+AGG | 0.500305 | 6.3:+71896186 | None:intergenic |
| GATTAAGGATTCGGTTGGTA+AGG | 0.506556 | 6.3:-71895107 | MS.gene37726:CDS |
| AAAGGTATTGCCATAGCCAT+TGG | 0.509985 | 6.3:+71895064 | None:intergenic |
| ATGAAACTCAATCTTACTAC+TGG | 0.510227 | 6.3:-71899798 | MS.gene37726:CDS |
| TACACAATTGCATAGGGCGC+AGG | 0.511720 | 6.3:+71895232 | None:intergenic |
| CGAAGCCAGGGTAAGGTAGC+CGG | 0.512157 | 6.3:+71895375 | None:intergenic |
| ATAGCCATAGCCATGATCCT+TGG | 0.513227 | 6.3:-71895892 | MS.gene37726:CDS |
| TCTACACTTTATATTGGTGT+GGG | 0.513632 | 6.3:-71896279 | MS.gene37726:CDS |
| CATCTGCCCTTCGTTTGTCC+CGG | 0.515709 | 6.3:+71895806 | None:intergenic |
| TACCGCAACATGGCGATACT+CGG | 0.519758 | 6.3:-71895211 | MS.gene37726:CDS |
| AAAAGAGCAAGTATTGAAGC+AGG | 0.521563 | 6.3:+71894896 | None:intergenic |
| GTTTGGCTCCTTGAGGTGTG+TGG | 0.522490 | 6.3:+71896744 | None:intergenic |
| AAATAAGGTCCTAAATAGAA+AGG | 0.525642 | 6.3:+71895046 | None:intergenic |
| ATTCTTTGGCGCAGCGATTG+TGG | 0.525714 | 6.3:-71895137 | MS.gene37726:CDS |
| ACTTCCAACACACATGTCAA+TGG | 0.526506 | 6.3:+71895021 | None:intergenic |
| TTCTTTCTTGGGGAGTAATG+TGG | 0.528506 | 6.3:-71896209 | MS.gene37726:CDS |
| TAGACCATCTCCAAGGATCA+TGG | 0.531309 | 6.3:+71895882 | None:intergenic |
| TGGGTTTGTATAGTCAACTC+CGG | 0.531616 | 6.3:-71895825 | MS.gene37726:CDS |
| ATCTCCAAGGATCATGGCTA+TGG | 0.539270 | 6.3:+71895888 | None:intergenic |
| TGGTTCTATACAGCTGCTGA+TGG | 0.540404 | 6.3:-71896556 | MS.gene37726:CDS |
| TTTGCATGAAGTTCTTGTCA+AGG | 0.544491 | 6.3:-71894856 | MS.gene37726:CDS |
| TATGCTTTGAGTCCTAATGA+AGG | 0.546514 | 6.3:+71896514 | None:intergenic |
| TTTGCTAGTTTGGCTCCTTG+AGG | 0.547359 | 6.3:+71896737 | None:intergenic |
| ATCGCGGCGAAGCCAGGGTA+AGG | 0.548502 | 6.3:+71895368 | None:intergenic |
| GTCAAGGTCTACAAATGATA+GGG | 0.549410 | 6.3:-71894840 | MS.gene37726:CDS |
| TGAGCAGTTGCAGTACCACT+TGG | 0.550234 | 6.3:+71896782 | None:intergenic |
| GTTGCGGTACACAATTGCAT+AGG | 0.551367 | 6.3:+71895225 | None:intergenic |
| TTAAGGATCCTAAGTTGGGA+TGG | 0.551545 | 6.3:-71897425 | MS.gene37726:CDS |
| AGGATTCGGTTGGTAAGGTA+GGG | 0.553397 | 6.3:-71895102 | MS.gene37726:CDS |
| CAAAACCGGCTACCTTACCC+TGG | 0.553851 | 6.3:-71895380 | MS.gene37726:CDS |
| TAATAATGAGCATGAAGATA+GGG | 0.554096 | 6.3:-71900051 | MS.gene37726:CDS |
| CATGGATCGCGGCGAAGCCA+GGG | 0.554257 | 6.3:+71895363 | None:intergenic |
| GCGTGGGCTGGTGCATCACA+TGG | 0.556664 | 6.3:-71895481 | MS.gene37726:CDS |
| TCTGGTTTGATATGTGGTGA+TGG | 0.557129 | 6.3:-71894932 | MS.gene37726:CDS |
| TTCAGTTTCAGCTTCTTATG+GGG | 0.557685 | 6.3:-71896589 | MS.gene37726:CDS |
| ATGGCGATACTCGGAGTACA+AGG | 0.557969 | 6.3:-71895202 | MS.gene37726:CDS |
| TGGTCCCTAGCATCAACCTA+TGG | 0.558055 | 6.3:-71895529 | MS.gene37726:CDS |
| AGTTGCAGTACCACTTGGAT+AGG | 0.558787 | 6.3:+71896787 | None:intergenic |
| ATTAACGTATCAGTTCTCCT+TGG | 0.562504 | 6.3:-71896237 | MS.gene37726:CDS |
| ATGGTTGTGGACTAACAGAT+TGG | 0.563504 | 6.3:-71895549 | MS.gene37726:CDS |
| CCACTAATTGCAAACCATGT+AGG | 0.563777 | 6.3:+71895691 | None:intergenic |
| ATTGCCATAGCCATTGGAAG+TGG | 0.566809 | 6.3:+71895070 | None:intergenic |
| GGGTTTGTATAGTCAACTCC+GGG | 0.567231 | 6.3:-71895824 | MS.gene37726:CDS |
| CATACCACTTCCAATGGCTA+TGG | 0.569131 | 6.3:-71895074 | MS.gene37726:CDS |
| GGAAAAGGTTGACAAGGCTA+AGG | 0.569505 | 6.3:-71894981 | MS.gene37726:CDS |
| AACAGCTTCCACACACCTCA+AGG | 0.571496 | 6.3:-71896752 | MS.gene37726:CDS |
| GGCAGATGCTCTACCTGTTG+CGG | 0.571689 | 6.3:-71895791 | MS.gene37726:CDS |
| GTTAACTGATTCCTCCATGA+TGG | 0.571809 | 6.3:+71899876 | None:intergenic |
| TTTGCCATTGACATGTGTGT+TGG | 0.573547 | 6.3:-71895025 | MS.gene37726:CDS |
| ATCTGTTAGTCCACAACCAT+AGG | 0.575557 | 6.3:+71895552 | None:intergenic |
| GTCAACTCCGGGACAAACGA+AGG | 0.575818 | 6.3:-71895813 | MS.gene37726:CDS |
| AACAAAGAGGTTCTAGTACA+AGG | 0.578357 | 6.3:-71899953 | MS.gene37726:CDS |
| GCATTGCAAAATGCTAAGGT+TGG | 0.579645 | 6.3:+71895574 | None:intergenic |
| TTAAAGATCAGATTCCTACA+TGG | 0.584073 | 6.3:-71895705 | MS.gene37726:CDS |
| ATAGGCATTGCAAAATGCTA+AGG | 0.584698 | 6.3:+71895570 | None:intergenic |
| GGTTCTATACAGCTGCTGAT+GGG | 0.586315 | 6.3:-71896555 | MS.gene37726:CDS |
| GATGTTCATCATGACTCCGC+AGG | 0.591634 | 6.3:+71895435 | None:intergenic |
| TTTGAGTCCTAATGAAGGGA+AGG | 0.592188 | 6.3:+71896519 | None:intergenic |
| AGCGACCTTCAAGGAATCCA+AGG | 0.593917 | 6.3:-71896135 | MS.gene37726:CDS |
| TCAAGGAATCCAAGGTTACA+GGG | 0.594343 | 6.3:-71896127 | MS.gene37726:intron |
| CTTGCTAGTCTTGCAGCCTG+CGG | 0.595048 | 6.3:-71895451 | MS.gene37726:CDS |
| CTTGAAGGTCGCTGTCACCA+AGG | 0.596472 | 6.3:+71896145 | None:intergenic |
| TGCAATTGTGTACCGCAACA+TGG | 0.597605 | 6.3:-71895221 | MS.gene37726:CDS |
| AACTTGATTAAGGATTCGGT+TGG | 0.598409 | 6.3:-71895112 | MS.gene37726:CDS |
| CTCCGAGTATCGCCATGTTG+CGG | 0.598881 | 6.3:+71895209 | None:intergenic |
| ATTCGGTTGGTAAGGTAGGG+AGG | 0.598930 | 6.3:-71895099 | MS.gene37726:CDS |
| TTGCGGTACACAATTGCATA+GGG | 0.599911 | 6.3:+71895226 | None:intergenic |
| GTAAGATAACTCAGGACTCG+AGG | 0.605381 | 6.3:+71895756 | None:intergenic |
| GAGGTTCATACCACTTCCAA+TGG | 0.605541 | 6.3:-71895080 | MS.gene37726:CDS |
| ATGCTTTGAGTCCTAATGAA+GGG | 0.608080 | 6.3:+71896515 | None:intergenic |
| AGAATATATAACAAAGCATG+AGG | 0.611959 | 6.3:+71895155 | None:intergenic |
| TACAAAGCATTTCCTGACCT+AGG | 0.612341 | 6.3:-71895274 | MS.gene37726:CDS |
| ATCAAACCAGAAGCAACAGC+AGG | 0.613290 | 6.3:+71894944 | None:intergenic |
| AAGAACTTCATGCAAATAGG+AGG | 0.617407 | 6.3:+71894863 | None:intergenic |
| CCCAAGAAAGAACTCCTCCA+AGG | 0.622090 | 6.3:+71896220 | None:intergenic |
| ATAGCCATGATCCTTGGAGA+TGG | 0.623397 | 6.3:-71895886 | MS.gene37726:CDS |
| GAAGATAGGGTAGTTGACAA+TGG | 0.624032 | 6.3:-71900038 | MS.gene37726:CDS |
| TGTTTGGGAAAAGGTTGACA+AGG | 0.624033 | 6.3:-71894987 | MS.gene37726:CDS |
| TGATCATCGTAAGATAACTC+AGG | 0.626341 | 6.3:+71895748 | None:intergenic |
| ACACAATTGCATAGGGCGCA+GGG | 0.626742 | 6.3:+71895233 | None:intergenic |
| TAAGATAACTCAGGACTCGA+GGG | 0.628178 | 6.3:+71895757 | None:intergenic |
| TTTAGTTGAGGGAAGATGTG+CGG | 0.628491 | 6.3:+71895631 | None:intergenic |
| TTCAAATTAACCTATCCAAG+TGG | 0.629667 | 6.3:-71896797 | MS.gene37726:CDS |
| TTGTCACAAGTACAACAAAG+AGG | 0.630213 | 6.3:-71899966 | MS.gene37726:CDS |
| TATCTTACGATGATCAGCGC+CGG | 0.641527 | 6.3:-71895741 | MS.gene37726:CDS |
| GCCTCTCATAGAAACAAGAG+AGG | 0.644361 | 6.3:-71896187 | MS.gene37726:CDS |
| TCAACTCCGGGACAAACGAA+GGG | 0.644762 | 6.3:-71895812 | MS.gene37726:CDS |
| CCAGCAGAGACATTAAGTGA+AGG | 0.650274 | 6.3:+71899768 | None:intergenic |
| AGTTGTATAGACCATCTCCA+AGG | 0.673257 | 6.3:+71895875 | None:intergenic |
| TAGAAAATCCAAAAGACACA+AGG | 0.677007 | 6.3:+71895295 | None:intergenic |
| AGGGAAGATGTGCGGCAATG+TGG | 0.681629 | 6.3:+71895639 | None:intergenic |
| TGGGCTGGTGCATCACATGG+TGG | 0.687327 | 6.3:-71895478 | MS.gene37726:CDS |
| AAATAATCGGCACAACAATG+GGG | 0.703365 | 6.3:-71895330 | MS.gene37726:CDS |
| TGGCTCACAAACATGGATCG+CGG | 0.706606 | 6.3:+71895352 | None:intergenic |
| CCTCTCATAGAAACAAGAGA+GGG | 0.723877 | 6.3:-71896186 | MS.gene37726:CDS |
| ACTTATTAGTACCATCATGG+AGG | 0.730761 | 6.3:-71899887 | MS.gene37726:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTAATTTCATCAAATT+AGG | + | chr6.3:71897341-71897360 | None:intergenic | 10.0% |
| !! | ATCTAAATTTATTTATTTGT+AGG | - | chr6.3:71898559-71898578 | MS.gene37726:intron | 10.0% |
| !! | ATAATCAAATCATAGTAATA+AGG | + | chr6.3:71895420-71895439 | None:intergenic | 15.0% |
| !! | ATCATGGTTATTAAAAATAT+AGG | - | chr6.3:71897203-71897222 | MS.gene37726:intron | 15.0% |
| !! | ATTTATTTATTAGTCCAATT+TGG | - | chr6.3:71896231-71896250 | MS.gene37726:CDS | 15.0% |
| !! | TAATTCTTCAAAGAAAATTA+GGG | - | chr6.3:71895886-71895905 | MS.gene37726:CDS | 15.0% |
| !!! | GCATTTTTTCAAATTATTAT+CGG | - | chr6.3:71897928-71897947 | MS.gene37726:intron | 15.0% |
| !!! | TAATTAATCGTACTTTTTTA+AGG | - | chr6.3:71898911-71898930 | MS.gene37726:intron | 15.0% |
| !!! | TTAATTTTTCTGAATATGAT+AGG | - | chr6.3:71896261-71896280 | MS.gene37726:CDS | 15.0% |
| !! | AAATTAAATTCTGTCCAAAT+TGG | + | chr6.3:71896248-71896267 | None:intergenic | 20.0% |
| !! | AAGTTTGATATTGTTTGTTT+GGG | - | chr6.3:71899874-71899893 | MS.gene37726:CDS | 20.0% |
| !! | AATCTGTATATTTCAAAGTA+TGG | + | chr6.3:71896153-71896172 | None:intergenic | 20.0% |
| !! | ATCATGATATCATAGTAAAA+AGG | + | chr6.3:71895316-71895335 | None:intergenic | 20.0% |
| !! | CTAATTCTTCAAAGAAAATT+AGG | - | chr6.3:71895885-71895904 | MS.gene37726:CDS | 20.0% |
| !! | TACAAACTACAAAACATATA+GGG | + | chr6.3:71896994-71897013 | None:intergenic | 20.0% |
| !! | TTAATATATATTGCTGTGTT+GGG | + | chr6.3:71896694-71896713 | None:intergenic | 20.0% |
| !! | TTTGACAGAAAAAAAAATCT+TGG | - | chr6.3:71896843-71896862 | MS.gene37726:intron | 20.0% |
| !!! | AAGAACTTTGAAAATTTATG+TGG | - | chr6.3:71896204-71896223 | MS.gene37726:CDS | 20.0% |
| !!! | AAGTCAAATTATACTACTTT+TGG | - | chr6.3:71896301-71896320 | MS.gene37726:intron | 20.0% |
| !!! | ACATAAATTTTCAAAGTTCT+TGG | + | chr6.3:71896205-71896224 | None:intergenic | 20.0% |
| !!! | AGATTTTTCTATATTTTCCA+TGG | - | chr6.3:71896168-71896187 | MS.gene37726:CDS | 20.0% |
| !!! | ATATTTTATACCTTTCTAAG+AGG | + | chr6.3:71897528-71897547 | None:intergenic | 20.0% |
| !!! | ATGCTTTGTTATATATTCTT+TGG | - | chr6.3:71899725-71899744 | MS.gene37726:CDS | 20.0% |
| !!! | GATTTTTCTACACTTTATAT+TGG | - | chr6.3:71898591-71898610 | MS.gene37726:intron | 20.0% |
| !!! | TACAAAGTATTGTCAAATAA+CGG | - | chr6.3:71897015-71897034 | MS.gene37726:intron | 20.0% |
| ! | AAATAAGGTCCTAAATAGAA+AGG | + | chr6.3:71899833-71899852 | None:intergenic | 25.0% |
| ! | ACAGCAATATATATTAACGA+GGG | - | chr6.3:71896697-71896716 | MS.gene37726:intron | 25.0% |
| ! | ACTGATACGTTAATGATATA+TGG | + | chr6.3:71898633-71898652 | None:intergenic | 25.0% |
| ! | AGAATATATAACAAAGCATG+AGG | + | chr6.3:71899724-71899743 | None:intergenic | 25.0% |
| ! | AGACAAATAGTTTAAACGAA+GGG | + | chr6.3:71898519-71898538 | None:intergenic | 25.0% |
| ! | AGTCTATACCTATATTGAAA+GGG | - | chr6.3:71898454-71898473 | MS.gene37726:intron | 25.0% |
| ! | ATAATAATGAGCATGAAGAT+AGG | - | chr6.3:71894824-71894843 | MS.gene37726:CDS | 25.0% |
| ! | ATTATTTGTGAGTACGTATA+GGG | + | chr6.3:71897102-71897121 | None:intergenic | 25.0% |
| ! | CTTATACTAAACTTTGAGTA+TGG | + | chr6.3:71898177-71898196 | None:intergenic | 25.0% |
| ! | GAAGTTTGATATTGTTTGTT+TGG | - | chr6.3:71899873-71899892 | MS.gene37726:CDS | 25.0% |
| ! | GTACAAACTACAAAACATAT+AGG | + | chr6.3:71896995-71897014 | None:intergenic | 25.0% |
| ! | GTATTACAAACTGTTTAATC+TGG | - | chr6.3:71896872-71896891 | MS.gene37726:intron | 25.0% |
| ! | GTTAATATATATTGCTGTGT+TGG | + | chr6.3:71896695-71896714 | None:intergenic | 25.0% |
| ! | TAATAATGAGCATGAAGATA+GGG | - | chr6.3:71894825-71894844 | MS.gene37726:CDS | 25.0% |
| ! | TAGTCTATACCTATATTGAA+AGG | - | chr6.3:71898453-71898472 | MS.gene37726:intron | 25.0% |
| ! | TATTTGTCTCGTTCTAATTT+GGG | - | chr6.3:71898530-71898549 | MS.gene37726:intron | 25.0% |
| ! | TCCTTATCTCCAAAAAAATT+AGG | + | chr6.3:71895822-71895841 | None:intergenic | 25.0% |
| ! | TGAACAAGTTTGATTGAAAA+TGG | + | chr6.3:71898413-71898432 | None:intergenic | 25.0% |
| ! | TTAAAAGTTGCTTCTGTTAA+TGG | - | chr6.3:71898035-71898054 | MS.gene37726:intron | 25.0% |
| ! | TTGATATTCCCTTTCAATAT+AGG | + | chr6.3:71898465-71898484 | None:intergenic | 25.0% |
| !! | AAATTGATAGTATGCTTGTT+AGG | - | chr6.3:71895737-71895756 | MS.gene37726:CDS | 25.0% |
| !! | ACACGTTCAATCTAAAATTT+CGG | + | chr6.3:71897613-71897632 | None:intergenic | 25.0% |
| !! | GATTTTTCTTTGTCAAAACT+TGG | - | chr6.3:71895139-71895158 | MS.gene37726:CDS | 25.0% |
| !!! | ATGTAATACCATTTTAGTTG+AGG | + | chr6.3:71899260-71899279 | None:intergenic | 25.0% |
| !!! | CAAAACTGATTTTAAGTTAC+TGG | - | chr6.3:71897585-71897604 | MS.gene37726:intron | 25.0% |
| !!! | CTACAGTATCCTAATTTTTT+TGG | - | chr6.3:71895810-71895829 | MS.gene37726:CDS | 25.0% |
| !!! | TCCTAATTTTTTTGGAGATA+AGG | - | chr6.3:71895818-71895837 | MS.gene37726:CDS | 25.0% |
| !!! | TGTAATACCATTTTAGTTGA+GGG | + | chr6.3:71899259-71899278 | None:intergenic | 25.0% |
| AAACTTTGAGTATGGTAAAG+TGG | + | chr6.3:71898169-71898188 | None:intergenic | 30.0% | |
| AAAGAAAATTAGGGCATGTT+TGG | - | chr6.3:71895895-71895914 | MS.gene37726:CDS | 30.0% | |
| AATCAAACTAAGACCTAAAG+AGG | + | chr6.3:71896440-71896459 | None:intergenic | 30.0% | |
| ACAGTTGAATCAAAATCAGA+TGG | - | chr6.3:71897747-71897766 | MS.gene37726:intron | 30.0% | |
| ATCCAGCTTAACAATAAAAC+AGG | + | chr6.3:71895537-71895556 | None:intergenic | 30.0% | |
| ATGAAACTCAATCTTACTAC+TGG | - | chr6.3:71895078-71895097 | MS.gene37726:CDS | 30.0% | |
| ATGGCAATACCTTTCTATTT+AGG | - | chr6.3:71899821-71899840 | MS.gene37726:CDS | 30.0% | |
| ATGTTTGTGAGCCAAATAAT+CGG | - | chr6.3:71899533-71899552 | MS.gene37726:intron | 30.0% | |
| ATTCATAAGCTGTTGTATTC+TGG | - | chr6.3:71895555-71895574 | MS.gene37726:CDS | 30.0% | |
| ATTTGTCTCGTTCTAATTTG+GGG | - | chr6.3:71898531-71898550 | MS.gene37726:intron | 30.0% | |
| CACAGCAATATATATTAACG+AGG | - | chr6.3:71896696-71896715 | MS.gene37726:intron | 30.0% | |
| CACATGTGATTATATGGATT+TGG | - | chr6.3:71897674-71897693 | MS.gene37726:intron | 30.0% | |
| CATTATTTGTGAGTACGTAT+AGG | + | chr6.3:71897103-71897122 | None:intergenic | 30.0% | |
| CTATACGTACTCACAAATAA+TGG | - | chr6.3:71897101-71897120 | MS.gene37726:intron | 30.0% | |
| CTATTTGTCTCGTTCTAATT+TGG | - | chr6.3:71898529-71898548 | MS.gene37726:intron | 30.0% | |
| CTTATGCAAGATTTCAAAAC+CGG | - | chr6.3:71899482-71899501 | MS.gene37726:intron | 30.0% | |
| GAGACAAATAGTTTAAACGA+AGG | + | chr6.3:71898520-71898539 | None:intergenic | 30.0% | |
| GATATTGTTTGTTTGGGAAA+AGG | - | chr6.3:71899880-71899899 | MS.gene37726:CDS | 30.0% | |
| GATTAATTACATTCAGTGGA+TGG | + | chr6.3:71898900-71898919 | None:intergenic | 30.0% | |
| GATTGTGGTAAACTTGATTA+AGG | - | chr6.3:71899754-71899773 | MS.gene37726:CDS | 30.0% | |
| GGTAAACTTGATTAAGGATT+CGG | - | chr6.3:71899760-71899779 | MS.gene37726:CDS | 30.0% | |
| GTAAGGTGAAGCAAATTAAA+GGG | + | chr6.3:71898941-71898960 | None:intergenic | 30.0% | |
| GTACGATTAATTACATTCAG+TGG | + | chr6.3:71898904-71898923 | None:intergenic | 30.0% | |
| GTATTCTCTTGTCTAGTAAA+AGG | + | chr6.3:71895201-71895220 | None:intergenic | 30.0% | |
| GTTATCAATATTTCACTGTC+TGG | - | chr6.3:71896069-71896088 | MS.gene37726:intron | 30.0% | |
| TAGAAAATCCAAAAGACACA+AGG | + | chr6.3:71899584-71899603 | None:intergenic | 30.0% | |
| TAGAGAAGAAAAAATCGTTG+TGG | + | chr6.3:71896583-71896602 | None:intergenic | 30.0% | |
| TAGTCAAATATGTACTACTG+TGG | - | chr6.3:71896009-71896028 | MS.gene37726:intron | 30.0% | |
| TCATGTTGAAATTTGATGTG+TGG | - | chr6.3:71895354-71895373 | MS.gene37726:CDS | 30.0% | |
| TCCACTGAAAATAAATTCTG+TGG | - | chr6.3:71896817-71896836 | MS.gene37726:intron | 30.0% | |
| TCTACACTTTATATTGGTGT+GGG | - | chr6.3:71898597-71898616 | MS.gene37726:intron | 30.0% | |
| TCTTATCACTTGTATGTTTG+TGG | + | chr6.3:71896622-71896641 | None:intergenic | 30.0% | |
| TGGTCTATACAACTTTGTTA+AGG | - | chr6.3:71899010-71899029 | MS.gene37726:intron | 30.0% | |
| TGTAAGGTGAAGCAAATTAA+AGG | + | chr6.3:71898942-71898961 | None:intergenic | 30.0% | |
| TGTTAGGTTTGAAAATGACA+AGG | - | chr6.3:71895753-71895772 | MS.gene37726:CDS | 30.0% | |
| TTAAAGATCAGATTCCTACA+TGG | - | chr6.3:71899171-71899190 | MS.gene37726:intron | 30.0% | |
| TTCAAATTAACCTATCCAAG+TGG | - | chr6.3:71898079-71898098 | MS.gene37726:intron | 30.0% | |
| TTCTACACTTTATATTGGTG+TGG | - | chr6.3:71898596-71898615 | MS.gene37726:intron | 30.0% | |
| TTGACTATACAAACCCAATA+AGG | + | chr6.3:71899048-71899067 | None:intergenic | 30.0% | |
| TTTGATGTTATGCATGTGAA+AGG | - | chr6.3:71897259-71897278 | MS.gene37726:intron | 30.0% | |
| ! | AGATAAGGATTTGAGATAAG+AGG | - | chr6.3:71895833-71895852 | MS.gene37726:CDS | 30.0% |
| ! | ATAAGGATTTGAGATAAGAG+GGG | - | chr6.3:71895835-71895854 | MS.gene37726:CDS | 30.0% |
| ! | ATGTATGATGTAACCCATTT+TGG | - | chr6.3:71896371-71896390 | MS.gene37726:intron | 30.0% |
| ! | CAAAACTTGGACTAAGTTTT+TGG | - | chr6.3:71895152-71895171 | MS.gene37726:CDS | 30.0% |
| ! | CAAGGAATAGTCAAGATTTT+CGG | - | chr6.3:71895771-71895790 | MS.gene37726:CDS | 30.0% |
| ! | CTCAGACAAAAGTGATTTTA+AGG | - | chr6.3:71897434-71897453 | MS.gene37726:CDS | 30.0% |
| ! | CTGTTAATGGATGTAGATAA+TGG | - | chr6.3:71898048-71898067 | MS.gene37726:intron | 30.0% |
| ! | CTTTAAGAAAGAGTTGTTTC+CGG | + | chr6.3:71899157-71899176 | None:intergenic | 30.0% |
| ! | GATAAGGATTTGAGATAAGA+GGG | - | chr6.3:71895834-71895853 | MS.gene37726:CDS | 30.0% |
| ! | TAATTTCACCTTGTGTCTTT+TGG | - | chr6.3:71899573-71899592 | MS.gene37726:intron | 30.0% |
| ! | TTTTTCTTCTCTACGTATCT+CGG | - | chr6.3:71896590-71896609 | MS.gene37726:CDS | 30.0% |
| !! | AAACTAGCCATTTTCTCAAT+CGG | - | chr6.3:71899371-71899390 | MS.gene37726:intron | 30.0% |
| !! | ATTGACTTTTATGTGTTCCT+AGG | + | chr6.3:71899622-71899641 | None:intergenic | 30.0% |
| !! | CTTAAAATCACTTTTGTCTG+AGG | + | chr6.3:71897436-71897455 | None:intergenic | 30.0% |
| !! | GAATTTATTTTCAGTGGAAG+TGG | + | chr6.3:71896815-71896834 | None:intergenic | 30.0% |
| !! | GATTTTAAGGATCCTAAGTT+GGG | - | chr6.3:71897447-71897466 | MS.gene37726:CDS | 30.0% |
| !! | GATTTTCGGCAGTTTTTTTT+AGG | - | chr6.3:71895785-71895804 | MS.gene37726:CDS | 30.0% |
| !! | TCCACAGAATTTATTTTCAG+TGG | + | chr6.3:71896821-71896840 | None:intergenic | 30.0% |
| !! | TGATTTTAAGGATCCTAAGT+TGG | - | chr6.3:71897446-71897465 | MS.gene37726:CDS | 30.0% |
| !! | TTTTCCTTTTCTACTTTTCC+AGG | - | chr6.3:71898237-71898256 | MS.gene37726:intron | 30.0% |
| !!! | CTCTTTGTTGTTAGCTTTTT+GGG | - | chr6.3:71897486-71897505 | MS.gene37726:CDS | 30.0% |
| !!! | TCTCTTTGTTGTTAGCTTTT+TGG | - | chr6.3:71897485-71897504 | MS.gene37726:CDS | 30.0% |
| AAAAATGCGCAACTCAATGT+AGG | + | chr6.3:71897916-71897935 | None:intergenic | 35.0% | |
| AAATAATCGGCACAACAATG+GGG | - | chr6.3:71899546-71899565 | MS.gene37726:intron | 35.0% | |
| AAATCGTGCTTGACTGTATT+CGG | - | chr6.3:71898826-71898845 | MS.gene37726:intron | 35.0% | |
| AAATTAGGGCATGTTTGGAT+TGG | - | chr6.3:71895900-71895919 | MS.gene37726:CDS | 35.0% | |
| AAGAACTTCATGCAAATAGG+AGG | + | chr6.3:71900016-71900035 | None:intergenic | 35.0% | |
| ACAAGGATTCAGTTCTTTAC+CGG | - | chr6.3:71899691-71899710 | MS.gene37726:CDS | 35.0% | |
| ACACGACACATGTGATTATA+TGG | - | chr6.3:71897668-71897687 | MS.gene37726:intron | 35.0% | |
| ACATCTTCCCTCAACTAAAA+TGG | - | chr6.3:71899249-71899268 | MS.gene37726:intron | 35.0% | |
| ACTTATTAGTACCATCATGG+AGG | - | chr6.3:71894989-71895008 | MS.gene37726:CDS | 35.0% | |
| AGAAGAAAAAATCGTTGTGG+CGG | + | chr6.3:71896580-71896599 | None:intergenic | 35.0% | |
| AGCACTTATTAGTACCATCA+TGG | - | chr6.3:71894986-71895005 | MS.gene37726:CDS | 35.0% | |
| AGGAAGCAAGTGAAATTGTT+GGG | - | chr6.3:71898257-71898276 | MS.gene37726:intron | 35.0% | |
| ATATGGATTTGGATTGTCTG+CGG | - | chr6.3:71897685-71897704 | MS.gene37726:intron | 35.0% | |
| ATGATCAATGTTGTCAATCG+CGG | + | chr6.3:71897188-71897207 | None:intergenic | 35.0% | |
| ATTAACGTATCAGTTCTCCT+TGG | - | chr6.3:71898639-71898658 | MS.gene37726:intron | 35.0% | |
| ATTGTCAAATAGCGGCTATA+GGG | - | chr6.3:71896919-71896938 | MS.gene37726:intron | 35.0% | |
| CAAATAATCGGCACAACAAT+GGG | - | chr6.3:71899545-71899564 | MS.gene37726:intron | 35.0% | |
| CACATGTCAATGGCAAAATA+AGG | + | chr6.3:71899848-71899867 | None:intergenic | 35.0% | |
| CAGCTTAACAATAAAACAGG+AGG | + | chr6.3:71895534-71895553 | None:intergenic | 35.0% | |
| CATGTTCACTCATACCAAAT+AGG | + | chr6.3:71897401-71897420 | None:intergenic | 35.0% | |
| CATTCACGTAGTTAGTACAT+TGG | + | chr6.3:71897863-71897882 | None:intergenic | 35.0% | |
| CATTTATGCAGTCAACACAA+CGG | - | chr6.3:71897722-71897741 | MS.gene37726:intron | 35.0% | |
| CTCACAAATAATGGCTATAG+TGG | - | chr6.3:71897110-71897129 | MS.gene37726:intron | 35.0% | |
| CTGAATATGATAGGAGTAGA+AGG | - | chr6.3:71896270-71896289 | MS.gene37726:CDS | 35.0% | |
| CTTCAGTTTCAGCTTCTTAT+GGG | - | chr6.3:71898286-71898305 | MS.gene37726:intron | 35.0% | |
| GACAAGAACTTCATGCAAAT+AGG | + | chr6.3:71900019-71900038 | None:intergenic | 35.0% | |
| GGTGGTCGTTGAATTAATAT+CGG | + | chr6.3:71897842-71897861 | None:intergenic | 35.0% | |
| GTAGTACATATTTGACTAGC+TGG | + | chr6.3:71896007-71896026 | None:intergenic | 35.0% | |
| GTCAAGGTCTACAAATGATA+GGG | - | chr6.3:71900036-71900055 | MS.gene37726:CDS | 35.0% | |
| GTCGTTGAATTAATATCGGA+TGG | + | chr6.3:71897838-71897857 | None:intergenic | 35.0% | |
| GTGCTAACTCATACCTTATT+GGG | - | chr6.3:71899032-71899051 | MS.gene37726:intron | 35.0% | |
| GTGGAAAAAATTCCCTCATA+AGG | + | chr6.3:71896796-71896815 | None:intergenic | 35.0% | |
| TAAATACCTGCAGAACTCAA+TGG | + | chr6.3:71898965-71898984 | None:intergenic | 35.0% | |
| TAGTCAGCATTGTCAAATAG+CGG | - | chr6.3:71896911-71896930 | MS.gene37726:intron | 35.0% | |
| TCAAATTAGTCCACCGAAAT+TGG | + | chr6.3:71896473-71896492 | None:intergenic | 35.0% | |
| TCTTATGGGGTTTCTTTCAA+TGG | - | chr6.3:71898300-71898319 | MS.gene37726:intron | 35.0% | |
| TCTTCAGTTTCAGCTTCTTA+TGG | - | chr6.3:71898285-71898304 | MS.gene37726:intron | 35.0% | |
| TGATCATCGTAAGATAACTC+AGG | + | chr6.3:71899131-71899150 | None:intergenic | 35.0% | |
| TGTCAAGGTCTACAAATGAT+AGG | - | chr6.3:71900035-71900054 | MS.gene37726:CDS | 35.0% | |
| TGTGATTCACTTGTATGAAC+AGG | - | chr6.3:71897360-71897379 | MS.gene37726:intron | 35.0% | |
| TGTGTTCAAATATGCAGTTG+AGG | + | chr6.3:71898803-71898822 | None:intergenic | 35.0% | |
| TTCAGTTTCAGCTTCTTATG+GGG | - | chr6.3:71898287-71898306 | MS.gene37726:intron | 35.0% | |
| TTGTATGAACAGGAGGATTT+GGG | - | chr6.3:71897370-71897389 | MS.gene37726:CDS | 35.0% | |
| TTGTCACAAGTACAACAAAG+AGG | - | chr6.3:71894910-71894929 | MS.gene37726:CDS | 35.0% | |
| TTTCTGTCAGGATTAGAACT+CGG | - | chr6.3:71895612-71895631 | MS.gene37726:CDS | 35.0% | |
| TTTGCATGAAGTTCTTGTCA+AGG | - | chr6.3:71900020-71900039 | MS.gene37726:CDS | 35.0% | |
| ! | AACAAAGAGGTTCTAGTACA+AGG | - | chr6.3:71894923-71894942 | MS.gene37726:CDS | 35.0% |
| ! | AACTTGATTAAGGATTCGGT+TGG | - | chr6.3:71899764-71899783 | MS.gene37726:CDS | 35.0% |
| ! | AAGTGGTTACTTTGCTAGTT+TGG | + | chr6.3:71898152-71898171 | None:intergenic | 35.0% |
| ! | ACAGAAGCAACTTTTAAGCA+AGG | + | chr6.3:71898032-71898051 | None:intergenic | 35.0% |
| ! | ACTTTTGTCTGAGGATTGAT+TGG | + | chr6.3:71897427-71897446 | None:intergenic | 35.0% |
| ! | ATAGGCATTGCAAAATGCTA+AGG | + | chr6.3:71899309-71899328 | None:intergenic | 35.0% |
| ! | ATGCTTTGAGTCCTAATGAA+GGG | + | chr6.3:71898364-71898383 | None:intergenic | 35.0% |
| ! | CTATTTGACAATGCTGACTA+TGG | + | chr6.3:71896911-71896930 | None:intergenic | 35.0% |
| ! | GATTATTTGGCTCACAAACA+TGG | + | chr6.3:71899534-71899553 | None:intergenic | 35.0% |
| ! | GCTTCAATACTTGCTCTTTT+TGG | - | chr6.3:71899983-71900002 | MS.gene37726:CDS | 35.0% |
| ! | TATGCTTTGAGTCCTAATGA+AGG | + | chr6.3:71898365-71898384 | None:intergenic | 35.0% |
| ! | TGTCTGGAATATATGAACCT+TGG | - | chr6.3:71896085-71896104 | MS.gene37726:intron | 35.0% |
| ! | TTAGCATTTTGCAATGCCTA+TGG | - | chr6.3:71899308-71899327 | MS.gene37726:intron | 35.0% |
| !! | AAAAGAGCAAGTATTGAAGC+AGG | + | chr6.3:71899983-71900002 | None:intergenic | 35.0% |
| !! | AATCGATGATTGTTTCTGTC+AGG | - | chr6.3:71895600-71895619 | MS.gene37726:CDS | 35.0% |
| !! | CTCCTGTTTTATTGTTAAGC+TGG | - | chr6.3:71895532-71895551 | MS.gene37726:CDS | 35.0% |
| !! | GAGATTATGAAGCATCGATA+CGG | + | chr6.3:71897988-71898007 | None:intergenic | 35.0% |
| !! | GATAGGGTTGATACTTTCTT+AGG | - | chr6.3:71900052-71900071 | MS.gene37726:CDS | 35.0% |
| !! | TGATATGTGGTGATGGAATA+TGG | - | chr6.3:71899951-71899970 | MS.gene37726:CDS | 35.0% |
| !! | TTTTTCCTGTTGCTATTCCA+AGG | + | chr6.3:71896105-71896124 | None:intergenic | 35.0% |
| !!! | GAAAATGGCTAGTTTTCCAT+AGG | + | chr6.3:71899366-71899385 | None:intergenic | 35.0% |
| !!! | TCTTCTGGAATTGCTTTTAG+TGG | - | chr6.3:71895246-71895265 | MS.gene37726:CDS | 35.0% |
| !!! | TTTTCCATAGGTTGATGCTA+GGG | + | chr6.3:71899354-71899373 | None:intergenic | 35.0% |
| AAATTCCCTCATAAGGCAAC+CGG | + | chr6.3:71896789-71896808 | None:intergenic | 40.0% | |
| ACCACCAGATCAACCAAAAT+GGG | + | chr6.3:71896387-71896406 | None:intergenic | 40.0% | |
| ACTTCCAACACACATGTCAA+TGG | + | chr6.3:71899858-71899877 | None:intergenic | 40.0% | |
| AGTTGTATAGACCATCTCCA+AGG | + | chr6.3:71899004-71899023 | None:intergenic | 40.0% | |
| ATCTGTTAGTCCACAACCAT+AGG | + | chr6.3:71899327-71899346 | None:intergenic | 40.0% | |
| ATGAACCTTGGAATAGCAAC+AGG | - | chr6.3:71896097-71896116 | MS.gene37726:intron | 40.0% | |
| CAAAGCATGAGGCAATTATC+CGG | + | chr6.3:71899713-71899732 | None:intergenic | 40.0% | |
| CAACAATTTCACTTGCTTCC+TGG | + | chr6.3:71898258-71898277 | None:intergenic | 40.0% | |
| CAGGAAGCAAGTGAAATTGT+TGG | - | chr6.3:71898256-71898275 | MS.gene37726:intron | 40.0% | |
| CATTGGTACAAAAAAGGCCT+TGG | - | chr6.3:71898714-71898733 | MS.gene37726:intron | 40.0% | |
| CATTGTCAAATAGCGGCTAT+AGG | - | chr6.3:71896918-71896937 | MS.gene37726:intron | 40.0% | |
| CCAAATAATCGGCACAACAA+TGG | - | chr6.3:71899544-71899563 | MS.gene37726:intron | 40.0% | |
| CCACTAATTGCAAACCATGT+AGG | + | chr6.3:71899188-71899207 | None:intergenic | 40.0% | |
| CCTCTCATAGAAACAAGAGA+GGG | - | chr6.3:71898690-71898709 | MS.gene37726:intron | 40.0% | |
| CTTGTATGAACAGGAGGATT+TGG | - | chr6.3:71897369-71897388 | MS.gene37726:CDS | 40.0% | |
| GAAGATAGGGTAGTTGACAA+TGG | - | chr6.3:71894838-71894857 | MS.gene37726:CDS | 40.0% | |
| GAGGGTCATTGGTACAAAAA+AGG | - | chr6.3:71898708-71898727 | MS.gene37726:intron | 40.0% | |
| GATTCACTTGTATGAACAGG+AGG | - | chr6.3:71897363-71897382 | MS.gene37726:CDS | 40.0% | |
| GATTGTCTGCAATCAGCAAT+CGG | + | chr6.3:71897888-71897907 | None:intergenic | 40.0% | |
| GCAATAGCACTCTAGTATAG+TGG | - | chr6.3:71897134-71897153 | MS.gene37726:intron | 40.0% | |
| GCAATTATCCATCCCAACTT+AGG | + | chr6.3:71897462-71897481 | None:intergenic | 40.0% | |
| GCATTGCAAAATGCTAAGGT+TGG | + | chr6.3:71899305-71899324 | None:intergenic | 40.0% | |
| GCGATTGACAACATTGATCA+TGG | - | chr6.3:71897187-71897206 | MS.gene37726:intron | 40.0% | |
| GCTTCCTGGAAAAGTAGAAA+AGG | + | chr6.3:71898244-71898263 | None:intergenic | 40.0% | |
| GGATTTGGGAGTTACCTATT+TGG | - | chr6.3:71897384-71897403 | MS.gene37726:CDS | 40.0% | |
| GGTGCTAACTCATACCTTAT+TGG | - | chr6.3:71899031-71899050 | MS.gene37726:intron | 40.0% | |
| GTCAAATAACGGCTATACTC+TGG | - | chr6.3:71897026-71897045 | MS.gene37726:intron | 40.0% | |
| GTGTCACATCATTGTCTAAC+AGG | + | chr6.3:71897652-71897671 | None:intergenic | 40.0% | |
| TAAGATAACTCAGGACTCGA+GGG | + | chr6.3:71899122-71899141 | None:intergenic | 40.0% | |
| TAGAAACAAGAGAGGGTCAT+TGG | - | chr6.3:71898697-71898716 | MS.gene37726:intron | 40.0% | |
| TCAAGGAATCCAAGGTTACA+GGG | - | chr6.3:71898749-71898768 | MS.gene37726:intron | 40.0% | |
| TCACGTAGTTAGTACATTGG+TGG | + | chr6.3:71897860-71897879 | None:intergenic | 40.0% | |
| TCTTGGTATAAGCTGAACCA+TGG | + | chr6.3:71896188-71896207 | None:intergenic | 40.0% | |
| TGAAACTTACCCTGTAACCT+TGG | + | chr6.3:71898761-71898780 | None:intergenic | 40.0% | |
| TGGGTTTGTATAGTCAACTC+CGG | - | chr6.3:71899051-71899070 | MS.gene37726:intron | 40.0% | |
| TGTAACCTTGGATTCCTTGA+AGG | + | chr6.3:71898749-71898768 | None:intergenic | 40.0% | |
| TGTTTGGGAAAAGGTTGACA+AGG | - | chr6.3:71899889-71899908 | MS.gene37726:CDS | 40.0% | |
| TTCAAGGAATCCAAGGTTAC+AGG | - | chr6.3:71898748-71898767 | MS.gene37726:intron | 40.0% | |
| TTCTGTCAGGATTAGAACTC+GGG | - | chr6.3:71895613-71895632 | MS.gene37726:CDS | 40.0% | |
| TTCTTTCTTGGGGAGTAATG+TGG | - | chr6.3:71898667-71898686 | MS.gene37726:intron | 40.0% | |
| TTGCGGTACACAATTGCATA+GGG | + | chr6.3:71899653-71899672 | None:intergenic | 40.0% | |
| TTGCTGTATTCTTCTTGAGG+AGG | - | chr6.3:71896722-71896741 | MS.gene37726:intron | 40.0% | |
| TTGTCAAATAGCGGCTATAG+GGG | - | chr6.3:71896920-71896939 | MS.gene37726:intron | 40.0% | |
| TTTAGTTGAGGGAAGATGTG+CGG | + | chr6.3:71899248-71899267 | None:intergenic | 40.0% | |
| TTTCAAGCCTTCCCTTCATT+AGG | - | chr6.3:71898350-71898369 | MS.gene37726:intron | 40.0% | |
| TTTGAGTCCTAATGAAGGGA+AGG | + | chr6.3:71898360-71898379 | None:intergenic | 40.0% | |
| TTTGCCATTGACATGTGTGT+TGG | - | chr6.3:71899851-71899870 | MS.gene37726:CDS | 40.0% | |
| ! | ACTTGTGTTGTTGCTTCTTC+TGG | - | chr6.3:71895231-71895250 | MS.gene37726:CDS | 40.0% |
| ! | ATGGTTGTGGACTAACAGAT+TGG | - | chr6.3:71899327-71899346 | MS.gene37726:intron | 40.0% |
| ! | ATTCTCTCTGGTGCCAATTT+CGG | - | chr6.3:71896457-71896476 | MS.gene37726:intron | 40.0% |
| ! | CCTACATGGTTTGCAATTAG+TGG | - | chr6.3:71899185-71899204 | MS.gene37726:intron | 40.0% |
| ! | CTTTTATGTGTTCCTAGGTC+AGG | + | chr6.3:71899617-71899636 | None:intergenic | 40.0% |
| ! | GATTAAGGATTCGGTTGGTA+AGG | - | chr6.3:71899769-71899788 | MS.gene37726:CDS | 40.0% |
| ! | GGTCTTAGTTTGATTCTCTC+TGG | - | chr6.3:71896445-71896464 | MS.gene37726:intron | 40.0% |
| ! | GTGTTGCTGTATTCTTCTTG+AGG | - | chr6.3:71896719-71896738 | MS.gene37726:intron | 40.0% |
| ! | GTTAACTGATTCCTCCATGA+TGG | + | chr6.3:71895003-71895022 | None:intergenic | 40.0% |
| ! | TACAAAGCATTTCCTGACCT+AGG | - | chr6.3:71899602-71899621 | MS.gene37726:intron | 40.0% |
| ! | TCTGGTTTGATATGTGGTGA+TGG | - | chr6.3:71899944-71899963 | MS.gene37726:CDS | 40.0% |
| ! | TTAAGGATCCTAAGTTGGGA+TGG | - | chr6.3:71897451-71897470 | MS.gene37726:CDS | 40.0% |
| ! | TTTTGCAATGCCTATGGTTG+TGG | - | chr6.3:71899314-71899333 | MS.gene37726:intron | 40.0% |
| !! | AAAGGTATTGCCATAGCCAT+TGG | + | chr6.3:71899815-71899834 | None:intergenic | 40.0% |
| !! | CCATTGTTGTGCCGATTATT+TGG | + | chr6.3:71899547-71899566 | None:intergenic | 40.0% |
| !! | GTTGCTTCTGGTTTGATATG+TGG | - | chr6.3:71899938-71899957 | MS.gene37726:CDS | 40.0% |
| !!! | AATGTCTCTGCTGGTCTTTT+GGG | - | chr6.3:71895117-71895136 | MS.gene37726:CDS | 40.0% |
| !!! | GTAACCCATTTTGGTTGATC+TGG | - | chr6.3:71896380-71896399 | MS.gene37726:intron | 40.0% |
| !!! | GTTTTCCATAGGTTGATGCT+AGG | + | chr6.3:71899355-71899374 | None:intergenic | 40.0% |
| !!! | TAATGTCTCTGCTGGTCTTT+TGG | - | chr6.3:71895116-71895135 | MS.gene37726:CDS | 40.0% |
| AACGTATCAGTTCTCCTTGG+AGG | - | chr6.3:71898642-71898661 | MS.gene37726:intron | 45.0% | |
| AATTCCCTCATAAGGCAACC+GGG | + | chr6.3:71896788-71896807 | None:intergenic | 45.0% | |
| AGAAAAAATCGTTGTGGCGG+CGG | + | chr6.3:71896577-71896596 | None:intergenic | 45.0% | |
| AGTTGCAGTACCACTTGGAT+AGG | + | chr6.3:71898092-71898111 | None:intergenic | 45.0% | |
| ATAGCCATAGCCATGATCCT+TGG | - | chr6.3:71898984-71899003 | MS.gene37726:intron | 45.0% | |
| ATAGCCATGATCCTTGGAGA+TGG | - | chr6.3:71898990-71899009 | MS.gene37726:intron | 45.0% | |
| ATCAAACCAGAAGCAACAGC+AGG | + | chr6.3:71899935-71899954 | None:intergenic | 45.0% | |
| ATCTCCAAGGATCATGGCTA+TGG | + | chr6.3:71898991-71899010 | None:intergenic | 45.0% | |
| ATTGCCATAGCCATTGGAAG+TGG | + | chr6.3:71899809-71899828 | None:intergenic | 45.0% | |
| ATTGCTGTGTTGGGCTATGA+GGG | + | chr6.3:71896685-71896704 | None:intergenic | 45.0% | |
| CACCACCAGATCAACCAAAA+TGG | + | chr6.3:71896388-71896407 | None:intergenic | 45.0% | |
| CATACCACTTCCAATGGCTA+TGG | - | chr6.3:71899802-71899821 | MS.gene37726:CDS | 45.0% | |
| CCAGCAGAGACATTAAGTGA+AGG | + | chr6.3:71895111-71895130 | None:intergenic | 45.0% | |
| CCTTCACTTAATGTCTCTGC+TGG | - | chr6.3:71895108-71895127 | MS.gene37726:CDS | 45.0% | |
| CCTTGGAGGAGTTCTTTCTT+GGG | - | chr6.3:71898656-71898675 | MS.gene37726:intron | 45.0% | |
| CTAAAGAGGAACACACTCCA+AGG | + | chr6.3:71896426-71896445 | None:intergenic | 45.0% | |
| CTCAGTTGTGCCTCTTAGAA+AGG | - | chr6.3:71897515-71897534 | MS.gene37726:intron | 45.0% | |
| CTGCAGAACTCAATGGTGTA+AGG | + | chr6.3:71898958-71898977 | None:intergenic | 45.0% | |
| CTGTATTCTTCTTGAGGAGG+AGG | - | chr6.3:71896725-71896744 | MS.gene37726:intron | 45.0% | |
| CTTACACCATTGAGTTCTGC+AGG | - | chr6.3:71898956-71898975 | MS.gene37726:intron | 45.0% | |
| CTTGGAGGAGTTCTTTCTTG+GGG | - | chr6.3:71898657-71898676 | MS.gene37726:intron | 45.0% | |
| CTTGGAGTGTGTTCCTCTTT+AGG | - | chr6.3:71896424-71896443 | MS.gene37726:intron | 45.0% | |
| GAGGTTCATACCACTTCCAA+TGG | - | chr6.3:71899796-71899815 | MS.gene37726:CDS | 45.0% | |
| GCCTCTCATAGAAACAAGAG+AGG | - | chr6.3:71898689-71898708 | MS.gene37726:intron | 45.0% | |
| GCGCAACTCAATGTAGGATT+TGG | + | chr6.3:71897910-71897929 | None:intergenic | 45.0% | |
| GGAAAAGGTTGACAAGGCTA+AGG | - | chr6.3:71899895-71899914 | MS.gene37726:CDS | 45.0% | |
| GGGTTTGTATAGTCAACTCC+GGG | - | chr6.3:71899052-71899071 | MS.gene37726:intron | 45.0% | |
| GGTTCTATACAGCTGCTGAT+GGG | - | chr6.3:71898321-71898340 | MS.gene37726:intron | 45.0% | |
| GTAAGATAACTCAGGACTCG+AGG | + | chr6.3:71899123-71899142 | None:intergenic | 45.0% | |
| GTTGCGGTACACAATTGCAT+AGG | + | chr6.3:71899654-71899673 | None:intergenic | 45.0% | |
| TAGACCATCTCCAAGGATCA+TGG | + | chr6.3:71898997-71899016 | None:intergenic | 45.0% | |
| TATCTTACGATGATCAGCGC+CGG | - | chr6.3:71899135-71899154 | MS.gene37726:intron | 45.0% | |
| TATTGCTGTGTTGGGCTATG+AGG | + | chr6.3:71896686-71896705 | None:intergenic | 45.0% | |
| TCCTTGGAGGAGTTCTTTCT+TGG | - | chr6.3:71898655-71898674 | MS.gene37726:intron | 45.0% | |
| TCTAACAGGCAATGACGTGT+TGG | + | chr6.3:71897638-71897657 | None:intergenic | 45.0% | |
| TGCAATTGTGTACCGCAACA+TGG | - | chr6.3:71899655-71899674 | MS.gene37726:CDS | 45.0% | |
| TGGGTCAAGACATTGGGTTT+AGG | + | chr6.3:71896647-71896666 | None:intergenic | 45.0% | |
| TTCTTCTCTACGTATCTCGG+CGG | - | chr6.3:71896593-71896612 | MS.gene37726:CDS | 45.0% | |
| TTGGTATCACATATCTGCCC+CGG | - | chr6.3:71896767-71896786 | MS.gene37726:CDS | 45.0% | |
| ! | ACTAGGTTGGGTCAAGACAT+TGG | + | chr6.3:71896654-71896673 | None:intergenic | 45.0% |
| ! | ATGTTGTCAATCGCGGATTG+AGG | + | chr6.3:71897181-71897200 | None:intergenic | 45.0% |
| ! | CATTTTCTCAATCGGAGCGT+GGG | - | chr6.3:71899379-71899398 | MS.gene37726:intron | 45.0% |
| ! | CTAGGTTGGGTCAAGACATT+GGG | + | chr6.3:71896653-71896672 | None:intergenic | 45.0% |
| ! | GAGGGGTTTAGTGTTGAACT+TGG | - | chr6.3:71895852-71895871 | MS.gene37726:CDS | 45.0% |
| ! | TGGTTCTATACAGCTGCTGA+TGG | - | chr6.3:71898320-71898339 | MS.gene37726:intron | 45.0% |
| ! | TTTGCTAGTTTGGCTCCTTG+AGG | + | chr6.3:71898142-71898161 | None:intergenic | 45.0% |
| ! | TTTGGTTGATCTGGTGGTGA+TGG | - | chr6.3:71896389-71896408 | MS.gene37726:intron | 45.0% |
| !! | AAGGATTCGGTTGGTAAGGT+AGG | - | chr6.3:71899773-71899792 | MS.gene37726:CDS | 45.0% |
| !! | AGGATTCGGTTGGTAAGGTA+GGG | - | chr6.3:71899774-71899793 | MS.gene37726:CDS | 45.0% |
| !! | CCCTCTCTTGTTTCTATGAG+AGG | + | chr6.3:71898693-71898712 | None:intergenic | 45.0% |
| !!! | ACCCATTTTGGTTGATCTGG+TGG | - | chr6.3:71896383-71896402 | MS.gene37726:intron | 45.0% |
| !! | TTTATATTTAATTAATAGTT+TGG | - | chr6.3:71896347-71896366 | MS.gene37726:intron | 5.0% |
| AACAGCTTCCACACACCTCA+AGG | - | chr6.3:71898124-71898143 | MS.gene37726:intron | 50.0% | |
| ACACAATTGCATAGGGCGCA+GGG | + | chr6.3:71899646-71899665 | None:intergenic | 50.0% | |
| AGAGATGTCAACGTGACAGC+TGG | - | chr6.3:71896524-71896543 | MS.gene37726:CDS | 50.0% | |
| AGATGTCAACGTGACAGCTG+GGG | - | chr6.3:71896526-71896545 | MS.gene37726:CDS | 50.0% | |
| AGCGACCTTCAAGGAATCCA+AGG | - | chr6.3:71898741-71898760 | MS.gene37726:intron | 50.0% | |
| ATGGCGATACTCGGAGTACA+AGG | - | chr6.3:71899674-71899693 | MS.gene37726:CDS | 50.0% | |
| ATTCCCTCATAAGGCAACCG+GGG | + | chr6.3:71896787-71896806 | None:intergenic | 50.0% | |
| ATTCTTTGGCGCAGCGATTG+TGG | - | chr6.3:71899739-71899758 | MS.gene37726:CDS | 50.0% | |
| CCACGCTCCGATTGAGAAAA+TGG | + | chr6.3:71899381-71899400 | None:intergenic | 50.0% | |
| CCCAAGAAAGAACTCCTCCA+AGG | + | chr6.3:71898659-71898678 | None:intergenic | 50.0% | |
| GAGATGTCAACGTGACAGCT+GGG | - | chr6.3:71896525-71896544 | MS.gene37726:CDS | 50.0% | |
| GATGTTCATCATGACTCCGC+AGG | + | chr6.3:71899444-71899463 | None:intergenic | 50.0% | |
| TACACAATTGCATAGGGCGC+AGG | + | chr6.3:71899647-71899666 | None:intergenic | 50.0% | |
| TACCGCAACATGGCGATACT+CGG | - | chr6.3:71899665-71899684 | MS.gene37726:CDS | 50.0% | |
| TCAACTCCGGGACAAACGAA+GGG | - | chr6.3:71899064-71899083 | MS.gene37726:intron | 50.0% | |
| TCGTGCTTGACTGTATTCGG+TGG | - | chr6.3:71898829-71898848 | MS.gene37726:intron | 50.0% | |
| TGAGCAGTTGCAGTACCACT+TGG | + | chr6.3:71898097-71898116 | None:intergenic | 50.0% | |
| TGGCTCACAAACATGGATCG+CGG | + | chr6.3:71899527-71899546 | None:intergenic | 50.0% | |
| TGGTCCCTAGCATCAACCTA+TGG | - | chr6.3:71899347-71899366 | MS.gene37726:intron | 50.0% | |
| TGTCTTGACCCAACCTAGTG+AGG | - | chr6.3:71896655-71896674 | MS.gene37726:intron | 50.0% | |
| TTGCTGTGTTGGGCTATGAG+GGG | + | chr6.3:71896684-71896703 | None:intergenic | 50.0% | |
| ! | CCATTTTCTCAATCGGAGCG+TGG | - | chr6.3:71899378-71899397 | MS.gene37726:intron | 50.0% |
| ! | GCTTGACTGTATTCGGTGGA+TGG | - | chr6.3:71898833-71898852 | MS.gene37726:intron | 50.0% |
| ! | TATACAGCTGCTGATGGGTG+TGG | - | chr6.3:71898326-71898345 | MS.gene37726:intron | 50.0% |
| ! | TTTGCACCTGCTGTTGCTTC+TGG | - | chr6.3:71899926-71899945 | MS.gene37726:CDS | 50.0% |
| !! | ATTCGGTTGGTAAGGTAGGG+AGG | - | chr6.3:71899777-71899796 | MS.gene37726:CDS | 50.0% |
| AGGGAAGATGTGCGGCAATG+TGG | + | chr6.3:71899240-71899259 | None:intergenic | 55.0% | |
| AGGGGGAACCTCACTAGGTT+GGG | + | chr6.3:71896666-71896685 | None:intergenic | 55.0% | |
| CAAAACCGGCTACCTTACCC+TGG | - | chr6.3:71899496-71899515 | MS.gene37726:intron | 55.0% | |
| CATCTGCCCTTCGTTTGTCC+CGG | + | chr6.3:71899073-71899092 | None:intergenic | 55.0% | |
| CTATGAGGGGGAACCTCACT+AGG | + | chr6.3:71896671-71896690 | None:intergenic | 55.0% | |
| CTTGAAGGTCGCTGTCACCA+AGG | + | chr6.3:71898734-71898753 | None:intergenic | 55.0% | |
| GGCAGATGCTCTACCTGTTG+CGG | - | chr6.3:71899085-71899104 | MS.gene37726:intron | 55.0% | |
| GTCAACTCCGGGACAAACGA+AGG | - | chr6.3:71899063-71899082 | MS.gene37726:intron | 55.0% | |
| TCTTCTTGAGGAGGAGGACC+CGG | - | chr6.3:71896731-71896750 | MS.gene37726:intron | 55.0% | |
| TGCTGTGTTGGGCTATGAGG+GGG | + | chr6.3:71896683-71896702 | None:intergenic | 55.0% | |
| ! | CTCCGAGTATCGCCATGTTG+CGG | + | chr6.3:71899670-71899689 | None:intergenic | 55.0% |
| ! | CTCTCTGGTGCCAATTTCGG+TGG | - | chr6.3:71896460-71896479 | MS.gene37726:intron | 55.0% |
| ! | CTTGGTGACAGCGACCTTCA+AGG | - | chr6.3:71898732-71898751 | MS.gene37726:intron | 55.0% |
| ! | GTTTGGCTCCTTGAGGTGTG+TGG | + | chr6.3:71898135-71898154 | None:intergenic | 55.0% |
| !! | CTGGTGGTGATGGCTTGCTT+GGG | - | chr6.3:71896399-71896418 | MS.gene37726:intron | 55.0% |
| !! | CTTGCTAGTCTTGCAGCCTG+CGG | - | chr6.3:71899425-71899444 | MS.gene37726:intron | 55.0% |
| !! | TCTGGTGGTGATGGCTTGCT+TGG | - | chr6.3:71896398-71896417 | MS.gene37726:intron | 55.0% |
| !! | TGATGGCTTGCTTGGGACCT+TGG | - | chr6.3:71896406-71896425 | MS.gene37726:intron | 55.0% |
| CGAAGCCAGGGTAAGGTAGC+CGG | + | chr6.3:71899504-71899523 | None:intergenic | 60.0% | |
| CTGCCCCGGTTGCCTTATGA+GGG | - | chr6.3:71896781-71896800 | MS.gene37726:CDS | 60.0% | |
| GAGGGGGAACCTCACTAGGT+TGG | + | chr6.3:71896667-71896686 | None:intergenic | 60.0% | |
| TCTGCCCCGGTTGCCTTATG+AGG | - | chr6.3:71896780-71896799 | MS.gene37726:CDS | 60.0% | |
| TGTCAACGTGACAGCTGGGG+CGG | - | chr6.3:71896529-71896548 | MS.gene37726:CDS | 60.0% | |
| TTCTCAATCGGAGCGTGGGC+TGG | - | chr6.3:71899383-71899402 | MS.gene37726:intron | 60.0% | |
| !! | TGGGCTGGTGCATCACATGG+TGG | - | chr6.3:71899398-71899417 | MS.gene37726:intron | 60.0% |
| ACATGGATCGCGGCGAAGCC+AGG | + | chr6.3:71899517-71899536 | None:intergenic | 65.0% | |
| ATCGCGGCGAAGCCAGGGTA+AGG | + | chr6.3:71899511-71899530 | None:intergenic | 65.0% | |
| CATGGATCGCGGCGAAGCCA+GGG | + | chr6.3:71899516-71899535 | None:intergenic | 65.0% | |
| GTCAACGTGACAGCTGGGGC+GGG | - | chr6.3:71896530-71896549 | MS.gene37726:CDS | 65.0% | |
| TCTTGAGGAGGAGGACCCGG+CGG | - | chr6.3:71896734-71896753 | MS.gene37726:intron | 65.0% | |
| !! | GCGTGGGCTGGTGCATCACA+TGG | - | chr6.3:71899395-71899414 | MS.gene37726:intron | 65.0% |
| CTTGAGGAGGAGGACCCGGC+GGG | - | chr6.3:71896735-71896754 | MS.gene37726:intron | 70.0% | |
| TACCAAGCCGCCTACCCCGC+CGG | + | chr6.3:71896753-71896772 | None:intergenic | 70.0% | |
| TTGAGGAGGAGGACCCGGCG+GGG | - | chr6.3:71896736-71896755 | MS.gene37726:intron | 70.0% | |
| ACCAAGCCGCCTACCCCGCC+GGG | + | chr6.3:71896752-71896771 | None:intergenic | 75.0% | |
| ! | ACCCGGCGGGGTAGGCGGCT+TGG | - | chr6.3:71896748-71896767 | MS.gene37726:CDS | 80.0% |
| ! | GGAGGACCCGGCGGGGTAGG+CGG | - | chr6.3:71896743-71896762 | MS.gene37726:CDS | 80.0% |
| ! | GGAGGAGGACCCGGCGGGGT+AGG | - | chr6.3:71896740-71896759 | MS.gene37726:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 71894817 | 71900081 | 71894817 | ID=MS.gene37726 |
| chr6.3 | mRNA | 71894817 | 71900081 | 71894817 | ID=MS.gene37726.t1;Parent=MS.gene37726 |
| chr6.3 | exon | 71899631 | 71900081 | 71899631 | ID=MS.gene37726.t1.exon1;Parent=MS.gene37726.t1 |
| chr6.3 | CDS | 71899631 | 71900081 | 71899631 | ID=cds.MS.gene37726.t1;Parent=MS.gene37726.t1 |
| chr6.3 | exon | 71897362 | 71897516 | 71897362 | ID=MS.gene37726.t1.exon2;Parent=MS.gene37726.t1 |
| chr6.3 | CDS | 71897362 | 71897516 | 71897362 | ID=cds.MS.gene37726.t1;Parent=MS.gene37726.t1 |
| chr6.3 | exon | 71896737 | 71896834 | 71896737 | ID=MS.gene37726.t1.exon3;Parent=MS.gene37726.t1 |
| chr6.3 | CDS | 71896737 | 71896834 | 71896737 | ID=cds.MS.gene37726.t1;Parent=MS.gene37726.t1 |
| chr6.3 | exon | 71896505 | 71896639 | 71896505 | ID=MS.gene37726.t1.exon4;Parent=MS.gene37726.t1 |
| chr6.3 | CDS | 71896505 | 71896639 | 71896505 | ID=cds.MS.gene37726.t1;Parent=MS.gene37726.t1 |
| chr6.3 | exon | 71896128 | 71896317 | 71896128 | ID=MS.gene37726.t1.exon5;Parent=MS.gene37726.t1 |
| chr6.3 | CDS | 71896128 | 71896317 | 71896128 | ID=cds.MS.gene37726.t1;Parent=MS.gene37726.t1 |
| chr6.3 | exon | 71894817 | 71895920 | 71894817 | ID=MS.gene37726.t1.exon6;Parent=MS.gene37726.t1 |
| chr6.3 | CDS | 71894817 | 71895920 | 71894817 | ID=cds.MS.gene37726.t1;Parent=MS.gene37726.t1 |
| Gene Sequence |
| Protein sequence |
