Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05216.t1 | XP_003620154.1 | 95.6 | 712 | 27 | 1 | 1 | 708 | 1 | 712 | 0.00E+00 | 1338.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05216.t1 | Q6R3K4 | 74.8 | 664 | 159 | 3 | 51 | 706 | 57 | 720 | 5.2e-298 | 1024.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05216.t1 | G7KKB8 | 95.6 | 712 | 27 | 1 | 1 | 708 | 1 | 712 | 0.0e+00 | 1338.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049264 | MS.gene05216 | 0.807265 | 5.50E-50 | -1.69E-46 |
| MS.gene050105 | MS.gene05216 | 0.836555 | 8.74E-57 | -1.69E-46 |
| MS.gene051122 | MS.gene05216 | 0.81193 | 5.47E-51 | -1.69E-46 |
| MS.gene05216 | MS.gene052674 | 0.840777 | 7.09E-58 | -1.69E-46 |
| MS.gene05216 | MS.gene052675 | 0.842196 | 3.00E-58 | -1.69E-46 |
| MS.gene05216 | MS.gene052677 | 0.845271 | 4.51E-59 | -1.69E-46 |
| MS.gene05216 | MS.gene054479 | 0.843166 | 1.66E-58 | -1.69E-46 |
| MS.gene05216 | MS.gene055701 | 0.828641 | 8.03E-55 | -1.69E-46 |
| MS.gene05216 | MS.gene056480 | 0.818202 | 2.22E-52 | -1.69E-46 |
| MS.gene05216 | MS.gene057156 | -0.822694 | 2.07E-53 | -1.69E-46 |
| MS.gene05216 | MS.gene058223 | -0.856565 | 2.95E-62 | -1.69E-46 |
| MS.gene05216 | MS.gene059438 | 0.808805 | 2.59E-50 | -1.69E-46 |
| MS.gene05216 | MS.gene059439 | 0.814309 | 1.64E-51 | -1.69E-46 |
| MS.gene05216 | MS.gene059440 | 0.800801 | 1.22E-48 | -1.69E-46 |
| MS.gene05216 | MS.gene060850 | 0.811935 | 5.46E-51 | -1.69E-46 |
| MS.gene05216 | MS.gene060851 | 0.830327 | 3.13E-55 | -1.69E-46 |
| MS.gene05216 | MS.gene060852 | 0.827298 | 1.69E-54 | -1.69E-46 |
| MS.gene05216 | MS.gene06121 | 0.81769 | 2.89E-52 | -1.69E-46 |
| MS.gene05216 | MS.gene062781 | 0.808869 | 2.51E-50 | -1.69E-46 |
| MS.gene05216 | MS.gene06353 | 0.811144 | 8.11E-51 | -1.69E-46 |
| MS.gene05216 | MS.gene063772 | 0.815942 | 7.14E-52 | -1.69E-46 |
| MS.gene05216 | MS.gene065085 | 0.801803 | 7.58E-49 | -1.69E-46 |
| MS.gene05216 | MS.gene065461 | -0.813904 | 2.02E-51 | -1.69E-46 |
| MS.gene05216 | MS.gene066075 | 0.808207 | 3.47E-50 | -1.69E-46 |
| MS.gene05216 | MS.gene066745 | 0.808498 | 3.01E-50 | -1.69E-46 |
| MS.gene05216 | MS.gene069110 | 0.829883 | 4.01E-55 | -1.69E-46 |
| MS.gene05216 | MS.gene069554 | 0.810604 | 1.06E-50 | -1.69E-46 |
| MS.gene05216 | MS.gene070685 | 0.843994 | 9.95E-59 | -1.69E-46 |
| MS.gene05216 | MS.gene070713 | -0.83717 | 6.09E-57 | -1.69E-46 |
| MS.gene05216 | MS.gene07150 | 0.81178 | 5.90E-51 | -1.69E-46 |
| MS.gene05216 | MS.gene071667 | -0.861285 | 1.14E-63 | -1.69E-46 |
| MS.gene05216 | MS.gene071669 | -0.859295 | 4.57E-63 | -1.69E-46 |
| MS.gene05216 | MS.gene071670 | -0.867495 | 1.31E-65 | -1.69E-46 |
| MS.gene05216 | MS.gene071699 | 0.805362 | 1.38E-49 | -1.69E-46 |
| MS.gene05216 | MS.gene072153 | 0.816417 | 5.59E-52 | -1.69E-46 |
| MS.gene05216 | MS.gene072375 | -0.807969 | 3.90E-50 | -1.69E-46 |
| MS.gene05216 | MS.gene073015 | -0.819223 | 1.30E-52 | -1.69E-46 |
| MS.gene05216 | MS.gene073016 | -0.826749 | 2.29E-54 | -1.69E-46 |
| MS.gene05216 | MS.gene074040 | 0.826519 | 2.60E-54 | -1.69E-46 |
| MS.gene05216 | MS.gene09191 | 0.840531 | 8.22E-58 | -1.69E-46 |
| MS.gene05216 | MS.gene20198 | 0.812715 | 3.69E-51 | -1.69E-46 |
| MS.gene05216 | MS.gene25121 | 0.80935 | 1.98E-50 | -1.69E-46 |
| MS.gene05216 | MS.gene26469 | 0.801681 | 8.03E-49 | -1.69E-46 |
| MS.gene05216 | MS.gene28027 | 0.818456 | 1.94E-52 | -1.69E-46 |
| MS.gene05216 | MS.gene28862 | 0.808904 | 2.46E-50 | -1.69E-46 |
| MS.gene05216 | MS.gene29000 | 0.818231 | 2.18E-52 | -1.69E-46 |
| MS.gene05216 | MS.gene29361 | 0.821865 | 3.22E-53 | -1.69E-46 |
| MS.gene05216 | MS.gene30397 | 0.835808 | 1.35E-56 | -1.69E-46 |
| MS.gene05216 | MS.gene30753 | 0.808311 | 3.30E-50 | -1.69E-46 |
| MS.gene05216 | MS.gene31305 | 0.800593 | 1.34E-48 | -1.69E-46 |
| MS.gene05216 | MS.gene31960 | -0.810503 | 1.12E-50 | -1.69E-46 |
| MS.gene05216 | MS.gene32704 | -0.810576 | 1.08E-50 | -1.69E-46 |
| MS.gene05216 | MS.gene33177 | 0.800238 | 1.58E-48 | -1.69E-46 |
| MS.gene05216 | MS.gene33793 | -0.801836 | 7.46E-49 | -1.69E-46 |
| MS.gene05216 | MS.gene36154 | 0.851742 | 7.28E-61 | -1.69E-46 |
| MS.gene05216 | MS.gene36293 | 0.814616 | 1.41E-51 | -1.69E-46 |
| MS.gene05216 | MS.gene36571 | 0.824554 | 7.58E-54 | -1.69E-46 |
| MS.gene05216 | MS.gene37086 | 0.836247 | 1.05E-56 | -1.69E-46 |
| MS.gene05216 | MS.gene37726 | 0.879496 | 1.19E-69 | -1.69E-46 |
| MS.gene05216 | MS.gene39376 | -0.845538 | 3.82E-59 | -1.69E-46 |
| MS.gene05216 | MS.gene39665 | 0.807293 | 5.43E-50 | -1.69E-46 |
| MS.gene05216 | MS.gene39695 | -0.839176 | 1.85E-57 | -1.69E-46 |
| MS.gene05216 | MS.gene40006 | 0.843006 | 1.83E-58 | -1.69E-46 |
| MS.gene05216 | MS.gene40380 | -0.813478 | 2.51E-51 | -1.69E-46 |
| MS.gene05216 | MS.gene40381 | -0.818631 | 1.77E-52 | -1.69E-46 |
| MS.gene05216 | MS.gene40510 | 0.81128 | 7.57E-51 | -1.69E-46 |
| MS.gene05216 | MS.gene40743 | 0.816429 | 5.56E-52 | -1.69E-46 |
| MS.gene05216 | MS.gene40880 | 0.812626 | 3.86E-51 | -1.69E-46 |
| MS.gene05216 | MS.gene41037 | 0.802101 | 6.58E-49 | -1.69E-46 |
| MS.gene05216 | MS.gene44406 | -0.836225 | 1.06E-56 | -1.69E-46 |
| MS.gene05216 | MS.gene44407 | -0.85056 | 1.57E-60 | -1.69E-46 |
| MS.gene05216 | MS.gene47801 | 0.81143 | 7.03E-51 | -1.69E-46 |
| MS.gene05216 | MS.gene49553 | 0.832336 | 1.00E-55 | -1.69E-46 |
| MS.gene05216 | MS.gene49602 | 0.81374 | 2.20E-51 | -1.69E-46 |
| MS.gene05216 | MS.gene51650 | 0.807492 | 4.92E-50 | -1.69E-46 |
| MS.gene05216 | MS.gene53859 | -0.810021 | 1.42E-50 | -1.69E-46 |
| MS.gene05216 | MS.gene54512 | 0.838006 | 3.72E-57 | -1.69E-46 |
| MS.gene05216 | MS.gene55717 | 0.83198 | 1.23E-55 | -1.69E-46 |
| MS.gene05216 | MS.gene55718 | 0.80871 | 2.71E-50 | -1.69E-46 |
| MS.gene05216 | MS.gene55840 | 0.810353 | 1.20E-50 | -1.69E-46 |
| MS.gene05216 | MS.gene56421 | 0.809616 | 1.73E-50 | -1.69E-46 |
| MS.gene05216 | MS.gene56441 | 0.806629 | 7.50E-50 | -1.69E-46 |
| MS.gene05216 | MS.gene57336 | 0.820429 | 6.89E-53 | -1.69E-46 |
| MS.gene05216 | MS.gene58617 | 0.80826 | 3.38E-50 | -1.69E-46 |
| MS.gene05216 | MS.gene58627 | 0.806613 | 7.56E-50 | -1.69E-46 |
| MS.gene05216 | MS.gene58763 | 0.800474 | 1.42E-48 | -1.69E-46 |
| MS.gene05216 | MS.gene60725 | 0.836186 | 1.08E-56 | -1.69E-46 |
| MS.gene05216 | MS.gene60871 | 0.801051 | 1.08E-48 | -1.69E-46 |
| MS.gene05216 | MS.gene63539 | 0.814394 | 1.58E-51 | -1.69E-46 |
| MS.gene05216 | MS.gene65279 | -0.859598 | 3.70E-63 | -1.69E-46 |
| MS.gene05216 | MS.gene66049 | 0.817497 | 3.20E-52 | -1.69E-46 |
| MS.gene05216 | MS.gene71597 | 0.803034 | 4.23E-49 | -1.69E-46 |
| MS.gene05216 | MS.gene75626 | 0.818303 | 2.10E-52 | -1.69E-46 |
| MS.gene05216 | MS.gene77208 | 0.8369 | 7.13E-57 | -1.69E-46 |
| MS.gene05216 | MS.gene77579 | 0.834036 | 3.78E-56 | -1.69E-46 |
| MS.gene05216 | MS.gene77971 | -0.832515 | 9.05E-56 | -1.69E-46 |
| MS.gene05216 | MS.gene77972 | -0.805182 | 1.51E-49 | -1.69E-46 |
| MS.gene05216 | MS.gene78230 | 0.849033 | 4.19E-60 | -1.69E-46 |
| MS.gene05216 | MS.gene80770 | 0.819669 | 1.03E-52 | -1.69E-46 |
| MS.gene05216 | MS.gene82325 | 0.848864 | 4.67E-60 | -1.69E-46 |
| MS.gene05216 | MS.gene84457 | 0.800476 | 1.42E-48 | -1.69E-46 |
| MS.gene05216 | MS.gene84668 | 0.835185 | 1.94E-56 | -1.69E-46 |
| MS.gene05216 | MS.gene87669 | 0.801778 | 7.67E-49 | -1.69E-46 |
| MS.gene05216 | MS.gene88649 | 0.822478 | 2.32E-53 | -1.69E-46 |
| MS.gene05216 | MS.gene88881 | 0.840776 | 7.09E-58 | -1.69E-46 |
| MS.gene05216 | MS.gene88883 | 0.841881 | 3.63E-58 | -1.69E-46 |
| MS.gene05216 | MS.gene90789 | 0.832321 | 1.01E-55 | -1.69E-46 |
| MS.gene05216 | MS.gene91920 | 0.809103 | 2.23E-50 | -1.69E-46 |
| MS.gene05216 | MS.gene93172 | 0.808037 | 3.77E-50 | -1.69E-46 |
| MS.gene05216 | MS.gene93288 | -0.802749 | 4.84E-49 | -1.69E-46 |
| MS.gene05216 | MS.gene95157 | -0.858048 | 1.08E-62 | -1.69E-46 |
| MS.gene05216 | MS.gene95339 | 0.807404 | 5.14E-50 | -1.69E-46 |
| MS.gene05216 | MS.gene99030 | 0.81295 | 3.28E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene05216 | MS.gene05066 | PPI |
| MS.gene05216 | MS.gene05072 | PPI |
| MS.gene05216 | MS.gene55668 | PPI |
| MS.gene05216 | MS.gene017121 | PPI |
| MS.gene05216 | MS.gene049640 | PPI |
| MS.gene05216 | MS.gene05062 | PPI |
| MS.gene05216 | MS.gene030050 | PPI |
| MS.gene05216 | MS.gene008380 | PPI |
| MS.gene05216 | MS.gene038353 | PPI |
| MS.gene05216 | MS.gene05063 | PPI |
| MS.gene05216 | MS.gene049646 | PPI |
| MS.gene05216 | MS.gene008379 | PPI |
| MS.gene05216 | MS.gene049639 | PPI |
| MS.gene049642 | MS.gene05216 | PPI |
| MS.gene05216 | MS.gene017120 | PPI |
| MS.gene05216 | MS.gene05068 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05216.t1 | MTR_6g077870 | 97.191 | 712 | 16 | 2 | 1 | 708 | 1 | 712 | 0.0 | 1414 |
| MS.gene05216.t1 | MTR_6g077870 | 97.641 | 551 | 13 | 0 | 158 | 708 | 1 | 551 | 0.0 | 1103 |
| MS.gene05216.t1 | MTR_5g091600 | 72.526 | 677 | 180 | 3 | 34 | 706 | 6 | 680 | 0.0 | 998 |
| MS.gene05216.t1 | MTR_3g063490 | 69.841 | 693 | 202 | 4 | 19 | 706 | 4 | 694 | 0.0 | 981 |
| MS.gene05216.t1 | MTR_3g063520 | 70.732 | 697 | 188 | 5 | 16 | 708 | 6 | 690 | 0.0 | 946 |
| MS.gene05216.t1 | MTR_7g028250 | 57.609 | 644 | 259 | 7 | 59 | 693 | 35 | 673 | 0.0 | 770 |
| MS.gene05216.t1 | MTR_3g092090 | 52.897 | 673 | 299 | 7 | 28 | 693 | 2 | 663 | 0.0 | 752 |
| MS.gene05216.t1 | MTR_3g092090 | 52.640 | 663 | 296 | 7 | 28 | 683 | 2 | 653 | 0.0 | 734 |
| MS.gene05216.t1 | MTR_1g007580 | 51.565 | 671 | 299 | 9 | 43 | 696 | 11 | 672 | 0.0 | 723 |
| MS.gene05216.t1 | MTR_0312s0020 | 50.812 | 677 | 315 | 7 | 31 | 696 | 3 | 672 | 0.0 | 721 |
| MS.gene05216.t1 | MTR_1g007540 | 50.812 | 677 | 315 | 7 | 31 | 696 | 3 | 672 | 0.0 | 721 |
| MS.gene05216.t1 | MTR_1g077840 | 51.326 | 641 | 297 | 7 | 62 | 695 | 47 | 679 | 0.0 | 710 |
| MS.gene05216.t1 | MTR_1626s0010 | 47.917 | 240 | 120 | 2 | 234 | 473 | 1 | 235 | 7.14e-80 | 254 |
| MS.gene05216.t1 | MTR_5g091615 | 68.944 | 161 | 49 | 1 | 546 | 705 | 59 | 219 | 6.03e-68 | 225 |
| MS.gene05216.t1 | MTR_0312s0050 | 51.887 | 106 | 47 | 1 | 46 | 147 | 18 | 123 | 9.86e-31 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05216.t1 | AT1G65730 | 71.655 | 695 | 181 | 5 | 18 | 706 | 1 | 685 | 0.0 | 1043 |
| MS.gene05216.t1 | AT1G48370 | 71.208 | 712 | 187 | 5 | 13 | 706 | 9 | 720 | 0.0 | 1006 |
| MS.gene05216.t1 | AT3G17650 | 72.414 | 696 | 173 | 5 | 29 | 706 | 16 | 710 | 0.0 | 1005 |
| MS.gene05216.t1 | AT3G17650 | 72.414 | 696 | 173 | 5 | 29 | 706 | 16 | 710 | 0.0 | 1005 |
| MS.gene05216.t1 | AT1G48370 | 72.890 | 557 | 143 | 3 | 158 | 706 | 1 | 557 | 0.0 | 820 |
| MS.gene05216.t1 | AT3G27020 | 58.584 | 664 | 262 | 7 | 38 | 693 | 12 | 670 | 0.0 | 789 |
| MS.gene05216.t1 | AT5G41000 | 56.899 | 645 | 263 | 7 | 59 | 693 | 28 | 667 | 0.0 | 749 |
| MS.gene05216.t1 | AT5G53550 | 53.647 | 658 | 286 | 6 | 45 | 694 | 23 | 669 | 0.0 | 747 |
| MS.gene05216.t1 | AT5G53550 | 53.647 | 658 | 286 | 6 | 45 | 694 | 23 | 669 | 0.0 | 747 |
| MS.gene05216.t1 | AT5G53550 | 53.647 | 658 | 286 | 6 | 45 | 694 | 23 | 669 | 0.0 | 747 |
| MS.gene05216.t1 | AT5G53550 | 53.647 | 658 | 286 | 6 | 45 | 694 | 23 | 669 | 0.0 | 747 |
| MS.gene05216.t1 | AT5G53550 | 53.647 | 658 | 286 | 6 | 45 | 694 | 23 | 669 | 0.0 | 747 |
| MS.gene05216.t1 | AT4G24120 | 51.809 | 691 | 301 | 9 | 17 | 695 | 2 | 672 | 0.0 | 739 |
| MS.gene05216.t1 | AT5G24380 | 51.355 | 664 | 310 | 6 | 38 | 693 | 2 | 660 | 0.0 | 723 |
| MS.gene05216.t1 | AT5G41000 | 54.574 | 645 | 253 | 7 | 59 | 693 | 28 | 642 | 0.0 | 707 |
| MS.gene05216.t1 | AT5G53550 | 55.620 | 516 | 219 | 4 | 180 | 694 | 1 | 507 | 0.0 | 613 |
| MS.gene05216.t1 | AT5G41000 | 56.653 | 496 | 206 | 6 | 202 | 693 | 1 | 491 | 0.0 | 578 |
| MS.gene05216.t1 | AT5G45450 | 66.514 | 218 | 66 | 2 | 490 | 706 | 1 | 212 | 1.76e-98 | 302 |
Find 160 sgRNAs with CRISPR-Local
Find 376 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTGTGTTGTTGCTTCTTC+TGG | 0.151174 | 6.2:-77406325 | MS.gene05216:CDS |
| ATGGCAATACCTTTCTATTT+AGG | 0.166528 | 6.2:-77401770 | MS.gene05216:CDS |
| TAATGTCTCTGCTGGTCTTT+TGG | 0.168239 | 6.2:-77406440 | MS.gene05216:CDS |
| TAATTTCACCTTGTGTCTTT+TGG | 0.182441 | 6.2:-77402018 | MS.gene05216:CDS |
| TCCTTGGAGGAGTTCTTTCT+TGG | 0.198308 | 6.2:-77402935 | MS.gene05216:CDS |
| GGTGCTAACTCACACCTTAT+TGG | 0.207249 | 6.2:-77402560 | MS.gene05216:CDS |
| CCATTGTTGTGCCGATTATT+TGG | 0.212463 | 6.2:+77402047 | None:intergenic |
| GATAGGGTTGATACTTTCTT+AGG | 0.214363 | 6.2:-77401539 | MS.gene05216:CDS |
| CTTGTATGAACAGGAGGATT+TGG | 0.238454 | 6.2:-77404183 | MS.gene05216:intron |
| TTTGCACCTGCTGTTGCTTC+TGG | 0.245860 | 6.2:-77401665 | MS.gene05216:CDS |
| CAGGAAGCAAGTGAAATTAT+TGG | 0.246890 | 6.2:-77403333 | MS.gene05216:CDS |
| ATGCTTTGTTATATATTCTT+TGG | 0.249346 | 6.2:-77401866 | MS.gene05216:CDS |
| CCACGCTCCGATTGAGAAAA+TGG | 0.260199 | 6.2:+77402213 | None:intergenic |
| GTATTCTCTTGTCTAGTAAA+AGG | 0.283358 | 6.2:+77406358 | None:intergenic |
| GTGCTAACTCACACCTTATT+GGG | 0.286597 | 6.2:-77402559 | MS.gene05216:CDS |
| GATTGTGGTAAACTTGATTA+AGG | 0.288358 | 6.2:-77401837 | MS.gene05216:CDS |
| CCTTGGAGGAGTTCTTTCTT+GGG | 0.290700 | 6.2:-77402934 | MS.gene05216:CDS |
| GGATTTGGGAGTTACCTATT+TGG | 0.309829 | 6.2:-77404168 | MS.gene05216:CDS |
| ACATCTTCCCTCAACTAAAA+TGG | 0.319301 | 6.2:-77402342 | MS.gene05216:CDS |
| ACTGATACATTAATGATATA+TGG | 0.321580 | 6.2:+77402960 | None:intergenic |
| TCTTATGGGGTTTCTTTCAA+TGG | 0.331499 | 6.2:-77403289 | MS.gene05216:CDS |
| GAAGTTTGATATTGTTTGTT+TGG | 0.332768 | 6.2:-77401718 | MS.gene05216:CDS |
| TGTCAAGGTCCACAAATGAT+AGG | 0.332824 | 6.2:-77401556 | MS.gene05216:CDS |
| CCTACATGGTTTGCAATTAG+TGG | 0.333118 | 6.2:-77402406 | MS.gene05216:CDS |
| CAAATAATCGGCACAACAAT+GGG | 0.336116 | 6.2:-77402046 | MS.gene05216:CDS |
| TGATATGTGGTGATGGAATA+TGG | 0.339780 | 6.2:-77401640 | MS.gene05216:CDS |
| AGGAAGCAAGTGAAATTATT+GGG | 0.353770 | 6.2:-77403332 | MS.gene05216:CDS |
| ACAAGGATTCAGTTCTTTAC+CGG | 0.358284 | 6.2:-77401900 | MS.gene05216:CDS |
| TTTCAAGCCTTCCCTTCATT+AGG | 0.370895 | 6.2:-77403239 | MS.gene05216:CDS |
| GGTAAACTTGATTAAGGATT+CGG | 0.378893 | 6.2:-77401831 | MS.gene05216:CDS |
| CTTTAAGAAAGAGTTGTTTC+CGG | 0.382437 | 6.2:+77402437 | None:intergenic |
| TTGTATGAACAGGAGGATTT+GGG | 0.383317 | 6.2:-77404182 | MS.gene05216:intron |
| TTGACTATACAAACCCAATA+AGG | 0.387419 | 6.2:+77402546 | None:intergenic |
| TGACAAGAACTTCATGCAAA+TGG | 0.390570 | 6.2:+77401574 | None:intergenic |
| TTCAAGGAATCCAAGGTTAC+AGG | 0.397094 | 6.2:-77402842 | MS.gene05216:CDS |
| CTTATGCAAGATTTCAAAAC+CGG | 0.403681 | 6.2:-77402109 | MS.gene05216:CDS |
| AAGGATTCGGTTGGTAAGGT+AGG | 0.403845 | 6.2:-77401818 | MS.gene05216:CDS |
| ATAATAATGAGCATGAAGAT+AGG | 0.408695 | 6.2:-77406726 | MS.gene05216:CDS |
| CTCAGTTGTGCCTCTTAGAA+AGG | 0.409163 | 6.2:-77404037 | MS.gene05216:intron |
| CATGTTCACTCATACCAAAT+AGG | 0.417530 | 6.2:+77404154 | None:intergenic |
| CACATGTCAATGGCAAAATA+AGG | 0.417542 | 6.2:+77401746 | None:intergenic |
| AAGTTTGATATTGTTTGTTT+GGG | 0.419735 | 6.2:-77401717 | MS.gene05216:CDS |
| GTTGCTTCTGGTTTGATATG+TGG | 0.420440 | 6.2:-77401653 | MS.gene05216:CDS |
| ACATGGATCGCGGCGAAGCC+AGG | 0.421156 | 6.2:+77402077 | None:intergenic |
| GGAAAAGGTTGACAAGGTTA+AGG | 0.441406 | 6.2:-77401696 | MS.gene05216:CDS |
| GATATTGTTTGTTTGGGAAA+AGG | 0.445126 | 6.2:-77401711 | MS.gene05216:CDS |
| TTCTCAATCGGAGCGTGGGC+TGG | 0.448663 | 6.2:-77402208 | MS.gene05216:CDS |
| TGAAACTTACCCTGTAACCT+TGG | 0.450447 | 6.2:+77402832 | None:intergenic |
| TGTAACCTTGGATTCCTTGA+AGG | 0.452577 | 6.2:+77402844 | None:intergenic |
| TAGAAACAAGAGAGGGTCAT+TGG | 0.458945 | 6.2:-77402893 | MS.gene05216:CDS |
| ATGCTAAGGTTGGAGCAATC+AGG | 0.465083 | 6.2:+77402299 | None:intergenic |
| GCAATTATCCATCCCAACTT+AGG | 0.467065 | 6.2:+77404093 | None:intergenic |
| CCAAATAATCGGCACAACAA+TGG | 0.467718 | 6.2:-77402047 | MS.gene05216:CDS |
| CCTTCACTTAATGTCTCTGC+TGG | 0.473944 | 6.2:-77406448 | MS.gene05216:CDS |
| AGCACTTATTAGTACCATCA+TGG | 0.474614 | 6.2:-77406570 | MS.gene05216:CDS |
| TTCTACACTTTATATTGGTG+TGG | 0.475325 | 6.2:-77402994 | MS.gene05216:CDS |
| ATGTTTGTGAGCCAAATAAT+CGG | 0.476829 | 6.2:-77402058 | MS.gene05216:CDS |
| TGGTCTATACAACTTTGTTA+AGG | 0.481791 | 6.2:-77402581 | MS.gene05216:CDS |
| GATTATTTGGCTCACAAACA+TGG | 0.485265 | 6.2:+77402060 | None:intergenic |
| AGTATCAACCCTATCATTTG+TGG | 0.485819 | 6.2:+77401547 | None:intergenic |
| GGAGAGTCTTGATCCGCAAC+AGG | 0.487808 | 6.2:+77402493 | None:intergenic |
| CTTGGTGACAGCGACCTTCA+AGG | 0.488010 | 6.2:-77402858 | MS.gene05216:CDS |
| CTTGGAGGAGTTCTTTCTTG+GGG | 0.488944 | 6.2:-77402933 | MS.gene05216:CDS |
| GACAAGAACTTCATGCAAAT+GGG | 0.489849 | 6.2:+77401575 | None:intergenic |
| ATGAAACTTAATCTTACTAC+TGG | 0.492220 | 6.2:-77406478 | MS.gene05216:CDS |
| CAAAGCATGAGGCAATTATC+CGG | 0.498117 | 6.2:+77401881 | None:intergenic |
| CCCTCTCTTGTTTCTATGAG+AGG | 0.500305 | 6.2:+77402900 | None:intergenic |
| AATGTATCAGTTCTCCTTGG+AGG | 0.502394 | 6.2:-77402948 | MS.gene05216:CDS |
| ATTAATGTATCAGTTCTCCT+TGG | 0.503428 | 6.2:-77402951 | MS.gene05216:CDS |
| GATTAAGGATTCGGTTGGTA+AGG | 0.506556 | 6.2:-77401822 | MS.gene05216:CDS |
| AAAGGTATTGCCATAGCCAT+TGG | 0.509985 | 6.2:+77401779 | None:intergenic |
| TACACAATTGCATAGGGCGC+AGG | 0.511720 | 6.2:+77401947 | None:intergenic |
| CGAAGCCAGGGTAAGGTAGC+CGG | 0.512157 | 6.2:+77402090 | None:intergenic |
| ATAGCCATAGCCATGATCCT+TGG | 0.513227 | 6.2:-77402607 | MS.gene05216:CDS |
| TCTACACTTTATATTGGTGT+GGG | 0.513632 | 6.2:-77402993 | MS.gene05216:CDS |
| CATCTGCCCTTCGTTTGTCC+CGG | 0.515709 | 6.2:+77402521 | None:intergenic |
| CTGATCATCGTAAGATAACT+CGG | 0.518331 | 6.2:+77402462 | None:intergenic |
| TACCGCAACATGGCGATACT+CGG | 0.519758 | 6.2:-77401926 | MS.gene05216:CDS |
| AAAAGAGCAAGTATTGAAGC+AGG | 0.521563 | 6.2:+77401611 | None:intergenic |
| AAATAAGGTCCTAAATAGAA+AGG | 0.525642 | 6.2:+77401761 | None:intergenic |
| ATTCTTTGGCGCAGCGATTG+TGG | 0.525714 | 6.2:-77401852 | MS.gene05216:CDS |
| ACTTCCAACACACATGTCAA+TGG | 0.526506 | 6.2:+77401736 | None:intergenic |
| GTAAGATAACTCGGGACTCG+AGG | 0.527649 | 6.2:+77402471 | None:intergenic |
| TTCTTTCTTGGGGAGTAATG+TGG | 0.528506 | 6.2:-77402923 | MS.gene05216:CDS |
| TAGACCATCTCCAAGGATCA+TGG | 0.531309 | 6.2:+77402597 | None:intergenic |
| TGGGTTTGTATAGTCAACTC+CGG | 0.531616 | 6.2:-77402540 | MS.gene05216:CDS |
| TATGCTTTGAGTCCTAATGA+AGG | 0.533993 | 6.2:+77403227 | None:intergenic |
| TTTGCTAGTTTAGCTCCTTG+AGG | 0.534615 | 6.2:+77403456 | None:intergenic |
| ATCTCCAAGGATCATGGCTA+TGG | 0.539270 | 6.2:+77402603 | None:intergenic |
| ATCGCGGCGAAGCCAGGGTA+AGG | 0.548502 | 6.2:+77402083 | None:intergenic |
| TGAGCAGTTGCAGTACCACT+TGG | 0.550234 | 6.2:+77403501 | None:intergenic |
| GTTGCGGTACACAATTGCAT+AGG | 0.551367 | 6.2:+77401940 | None:intergenic |
| TTAAGGATCCTAAGTTGGGA+TGG | 0.551545 | 6.2:-77404101 | MS.gene05216:CDS |
| AGGATTCGGTTGGTAAGGTA+GGG | 0.553397 | 6.2:-77401817 | MS.gene05216:CDS |
| CAAAACCGGCTACCTTACCC+TGG | 0.553851 | 6.2:-77402095 | MS.gene05216:CDS |
| TAATAATGAGCATGAAGATA+GGG | 0.554096 | 6.2:-77406725 | MS.gene05216:CDS |
| CATGGATCGCGGCGAAGCCA+GGG | 0.554257 | 6.2:+77402078 | None:intergenic |
| GCGTGGGCTGGTGCATCACA+TGG | 0.556664 | 6.2:-77402196 | MS.gene05216:CDS |
| GTTTAGCTCCTTGAGGAGTG+TGG | 0.557065 | 6.2:+77403463 | None:intergenic |
| TCTGGTTTGATATGTGGTGA+TGG | 0.557129 | 6.2:-77401647 | MS.gene05216:CDS |
| AACAGCTTCCACACTCCTCA+AGG | 0.557684 | 6.2:-77403471 | MS.gene05216:CDS |
| TTTGCATGAAGTTCTTGTCA+AGG | 0.557889 | 6.2:-77401571 | MS.gene05216:CDS |
| ATGGCGATACTCGGAGTACA+AGG | 0.557969 | 6.2:-77401917 | MS.gene05216:CDS |
| TGGTCCCTAGCATCAACCTA+TGG | 0.558055 | 6.2:-77402244 | MS.gene05216:CDS |
| TAAGATAACTCGGGACTCGA+GGG | 0.558166 | 6.2:+77402472 | None:intergenic |
| GCATTGCAAAATGCTAAGGT+TGG | 0.558181 | 6.2:+77402289 | None:intergenic |
| GTCAAGGTCCACAAATGATA+GGG | 0.560228 | 6.2:-77401555 | MS.gene05216:CDS |
| ATGGTTGTGGACTAACAGAT+TGG | 0.563504 | 6.2:-77402264 | MS.gene05216:CDS |
| CCACTAATTGCAAACCATGT+AGG | 0.563777 | 6.2:+77402406 | None:intergenic |
| AACAAAGAGGTTCTAGTACA+AGG | 0.565986 | 6.2:-77406633 | MS.gene05216:CDS |
| ATTGCCATAGCCATTGGAAG+TGG | 0.566809 | 6.2:+77401785 | None:intergenic |
| GGGTTTGTATAGTCAACTCC+GGG | 0.567231 | 6.2:-77402539 | MS.gene05216:CDS |
| CATACCACTTCCAATGGCTA+TGG | 0.569131 | 6.2:-77401789 | MS.gene05216:CDS |
| TGGTTCTATACAGCTACTGA+TGG | 0.571213 | 6.2:-77403269 | MS.gene05216:CDS |
| GGCAGATGCTCTACCTGTTG+CGG | 0.571689 | 6.2:-77402506 | MS.gene05216:CDS |
| GTTAACTGATTCCTCCATGA+TGG | 0.571809 | 6.2:+77406556 | None:intergenic |
| TTTGCCATTGACATGTGTGT+TGG | 0.573547 | 6.2:-77401740 | MS.gene05216:CDS |
| ATCTGTTAGTCCACAACCAT+AGG | 0.575557 | 6.2:+77402267 | None:intergenic |
| GTCAACTCCGGGACAAACGA+AGG | 0.575818 | 6.2:-77402528 | MS.gene05216:CDS |
| CATAAATTGTCACAACAAAG+AGG | 0.576106 | 6.2:-77406646 | MS.gene05216:CDS |
| TATACAGCTACTGATGGATG+TGG | 0.581510 | 6.2:-77403263 | MS.gene05216:CDS |
| TTAAAGATCAGATTCCTACA+TGG | 0.584073 | 6.2:-77402420 | MS.gene05216:CDS |
| ATAGGCATTGCAAAATGCTA+AGG | 0.584698 | 6.2:+77402285 | None:intergenic |
| GATGTTCATCATGACTCCGC+AGG | 0.591634 | 6.2:+77402150 | None:intergenic |
| TTTGAGTCCTAATGAAGGGA+AGG | 0.592188 | 6.2:+77403232 | None:intergenic |
| AGCGACCTTCAAGGAATCCA+AGG | 0.593917 | 6.2:-77402849 | MS.gene05216:CDS |
| TCAAGGAATCCAAGGTTACA+GGG | 0.594343 | 6.2:-77402841 | MS.gene05216:intron |
| CTTGCTAGTCTTGCAGCCTG+CGG | 0.595048 | 6.2:-77402166 | MS.gene05216:CDS |
| CTTGAAGGTCGCTGTCACCA+AGG | 0.596472 | 6.2:+77402859 | None:intergenic |
| TGCAATTGTGTACCGCAACA+TGG | 0.597605 | 6.2:-77401936 | MS.gene05216:CDS |
| AACTTGATTAAGGATTCGGT+TGG | 0.598409 | 6.2:-77401827 | MS.gene05216:CDS |
| CTCCGAGTATCGCCATGTTG+CGG | 0.598881 | 6.2:+77401924 | None:intergenic |
| ATTCGGTTGGTAAGGTAGGG+AGG | 0.598930 | 6.2:-77401814 | MS.gene05216:CDS |
| TTGCGGTACACAATTGCATA+GGG | 0.599911 | 6.2:+77401941 | None:intergenic |
| GAGGTTCATACCACTTCCAA+TGG | 0.605541 | 6.2:-77401795 | MS.gene05216:CDS |
| ATGCTTTGAGTCCTAATGAA+GGG | 0.608080 | 6.2:+77403228 | None:intergenic |
| AGAATATATAACAAAGCATG+AGG | 0.611959 | 6.2:+77401870 | None:intergenic |
| TACAAAGCATTTCCTGACCT+AGG | 0.612341 | 6.2:-77401989 | MS.gene05216:CDS |
| ATCAAACCAGAAGCAACAGC+AGG | 0.613290 | 6.2:+77401659 | None:intergenic |
| TGTTTGGGAAAAGGTTGACA+AGG | 0.619259 | 6.2:-77401702 | MS.gene05216:CDS |
| CCCAAGAAAGAACTCCTCCA+AGG | 0.622090 | 6.2:+77402934 | None:intergenic |
| ATAGCCATGATCCTTGGAGA+TGG | 0.623397 | 6.2:-77402601 | MS.gene05216:CDS |
| GAAGATAGGGTAGTTGACAA+TGG | 0.624032 | 6.2:-77406712 | MS.gene05216:CDS |
| ACACAATTGCATAGGGCGCA+GGG | 0.626742 | 6.2:+77401948 | None:intergenic |
| TTTAGTTGAGGGAAGATGTG+CGG | 0.628491 | 6.2:+77402346 | None:intergenic |
| TGATCATCGTAAGATAACTC+GGG | 0.633923 | 6.2:+77402463 | None:intergenic |
| TATCTTACGATGATCAGCGC+CGG | 0.641527 | 6.2:-77402456 | MS.gene05216:CDS |
| GCCTCTCATAGAAACAAGAG+AGG | 0.644361 | 6.2:-77402901 | MS.gene05216:CDS |
| TCAACTCCGGGACAAACGAA+GGG | 0.644762 | 6.2:-77402527 | MS.gene05216:CDS |
| CCAGCAGAGACATTAAGTGA+AGG | 0.650274 | 6.2:+77406448 | None:intergenic |
| AAGAACTTCATGCAAATGGG+AGG | 0.671226 | 6.2:+77401578 | None:intergenic |
| AGTTGTATAGACCATCTCCA+AGG | 0.673257 | 6.2:+77402590 | None:intergenic |
| TTCAAGTTAACATATCCAAG+TGG | 0.674263 | 6.2:-77403516 | MS.gene05216:CDS |
| TAGAAAATCCAAAAGACACA+AGG | 0.677007 | 6.2:+77402010 | None:intergenic |
| AGGGAAGATGTGCGGCAATG+TGG | 0.681629 | 6.2:+77402354 | None:intergenic |
| TGGGCTGGTGCATCACATGG+TGG | 0.687327 | 6.2:-77402193 | MS.gene05216:CDS |
| AAATAATCGGCACAACAATG+GGG | 0.703365 | 6.2:-77402045 | MS.gene05216:CDS |
| TGGCTCACAAACATGGATCG+CGG | 0.706606 | 6.2:+77402067 | None:intergenic |
| CCTCTCATAGAAACAAGAGA+GGG | 0.723877 | 6.2:-77402900 | MS.gene05216:CDS |
| ACTTATTAGTACCATCATGG+AGG | 0.730761 | 6.2:-77406567 | MS.gene05216:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTAATTTCATCAAATT+AGG | + | chr6.2:77404054-77404073 | None:intergenic | 10.0% |
| !! | ATCTAAATTTATTTATTTGT+AGG | - | chr6.2:77405234-77405253 | MS.gene05216:intron | 10.0% |
| !! | ATAATCAAATCATAGTAATA+AGG | + | chr6.2:77402125-77402144 | None:intergenic | 15.0% |
| !! | ATCATGGTTATTAAAAATAT+AGG | - | chr6.2:77403916-77403935 | MS.gene05216:intron | 15.0% |
| !!! | TAATTAATCGTACTTTTTTA+AGG | - | chr6.2:77405586-77405605 | MS.gene05216:intron | 15.0% |
| !!! | TTAATTTTTCTGATTATGAT+AGG | - | chr6.2:77402973-77402992 | MS.gene05216:CDS | 15.0% |
| !! | AAGTAATTCAATATAGGATT+TGG | + | chr6.2:77404588-77404607 | None:intergenic | 20.0% |
| !! | AAGTTTGATATTGTTTGTTT+GGG | - | chr6.2:77406548-77406567 | MS.gene05216:CDS | 20.0% |
| !! | ACTGATACATTAATGATATA+TGG | + | chr6.2:77405308-77405327 | None:intergenic | 20.0% |
| !! | ATCATGATATCATAGTAATA+AGG | + | chr6.2:77402022-77402041 | None:intergenic | 20.0% |
| !! | ATCTTATGAAAACAGTTAAT+AGG | - | chr6.2:77402608-77402627 | MS.gene05216:CDS | 20.0% |
| !! | ATGTTAATGTATGTAGATAA+TGG | - | chr6.2:77404718-77404737 | MS.gene05216:intron | 20.0% |
| !! | ATTTAATCAAGGTTATTGAT+AGG | + | chr6.2:77404691-77404710 | None:intergenic | 20.0% |
| !! | TACAAACTACAAAACATATA+GGG | + | chr6.2:77403707-77403726 | None:intergenic | 20.0% |
| !! | TTAATATATATTGCTGTGTT+GGG | + | chr6.2:77403406-77403425 | None:intergenic | 20.0% |
| !! | TTATCTACATACATTAACAT+AGG | + | chr6.2:77404718-77404737 | None:intergenic | 20.0% |
| !! | TTGACAGAAAAAAAAAATCT+TGG | - | chr6.2:77403556-77403575 | MS.gene05216:intron | 20.0% |
| !! | TTGATATTCACTTTCTATAT+AGG | + | chr6.2:77405141-77405160 | None:intergenic | 20.0% |
| !!! | AAGAACTTTGAAAATTTATG+TGG | - | chr6.2:77402920-77402939 | MS.gene05216:CDS | 20.0% |
| !!! | AAGTCAAATTATACTACTTT+TGG | - | chr6.2:77403013-77403032 | MS.gene05216:intron | 20.0% |
| !!! | AATCTGTATTTTTCAAAGTA+TGG | + | chr6.2:77402869-77402888 | None:intergenic | 20.0% |
| !!! | ACATAAATTTTCAAAGTTCT+TGG | + | chr6.2:77402921-77402940 | None:intergenic | 20.0% |
| !!! | AGATTTTTCTATATTTTCCA+TGG | - | chr6.2:77402884-77402903 | MS.gene05216:CDS | 20.0% |
| !!! | ATGCTTTGTTATATATTCTT+TGG | - | chr6.2:77406399-77406418 | MS.gene05216:CDS | 20.0% |
| !!! | GATTTTTCTACACTTTATAT+TGG | - | chr6.2:77405266-77405285 | MS.gene05216:intron | 20.0% |
| !!! | TACAAAGTATTGTCAAATAA+CGG | - | chr6.2:77403728-77403747 | MS.gene05216:intron | 20.0% |
| !!! | TTTCAGTTTTAGTTTCTTAT+GGG | - | chr6.2:77404962-77404981 | MS.gene05216:intron | 20.0% |
| !!! | TTTTCAGTTTTAGTTTCTTA+TGG | - | chr6.2:77404961-77404980 | MS.gene05216:intron | 20.0% |
| ! | AAATAAGGTCCTAAATAGAA+AGG | + | chr6.2:77406507-77406526 | None:intergenic | 25.0% |
| ! | AAGTGCAAGTAATTCAATAT+AGG | + | chr6.2:77404594-77404613 | None:intergenic | 25.0% |
| ! | ACAGCAATATATATTAACGA+GGG | - | chr6.2:77403409-77403428 | MS.gene05216:intron | 25.0% |
| ! | AGAATATATAACAAAGCATG+AGG | + | chr6.2:77406398-77406417 | None:intergenic | 25.0% |
| ! | ATAATAATGAGCATGAAGAT+AGG | - | chr6.2:77401539-77401558 | MS.gene05216:CDS | 25.0% |
| ! | ATCACTTGAATTTAATCACT+TGG | - | chr6.2:77402367-77402386 | MS.gene05216:CDS | 25.0% |
| ! | ATGAAACTTAATCTTACTAC+TGG | - | chr6.2:77401787-77401806 | MS.gene05216:CDS | 25.0% |
| ! | ATTATTTGTGAGTACGTATA+GGG | + | chr6.2:77403815-77403834 | None:intergenic | 25.0% |
| ! | CACTTATATGATAAGTAACT+TGG | - | chr6.2:77402679-77402698 | MS.gene05216:intron | 25.0% |
| ! | CTGTATTTATGAGTCTAATT+TGG | - | chr6.2:77402943-77402962 | MS.gene05216:CDS | 25.0% |
| ! | CTTATAGTAAACATTGAGTA+TGG | + | chr6.2:77404847-77404866 | None:intergenic | 25.0% |
| ! | GAAATATTGATACTGCATTA+GGG | - | chr6.2:77404265-77404284 | MS.gene05216:intron | 25.0% |
| ! | GAAGTTTGATATTGTTTGTT+TGG | - | chr6.2:77406547-77406566 | MS.gene05216:CDS | 25.0% |
| ! | GTACAAACTACAAAACATAT+AGG | + | chr6.2:77403708-77403727 | None:intergenic | 25.0% |
| ! | GTATTACAAACTGTTTAATC+TGG | - | chr6.2:77403585-77403604 | MS.gene05216:intron | 25.0% |
| ! | GTTAATATATATTGCTGTGT+TGG | + | chr6.2:77403407-77403426 | None:intergenic | 25.0% |
| ! | TAATAATGAGCATGAAGATA+GGG | - | chr6.2:77401540-77401559 | MS.gene05216:CDS | 25.0% |
| ! | TATTTGTCTCGTTCTAATTT+GGG | - | chr6.2:77405205-77405224 | MS.gene05216:intron | 25.0% |
| ! | TCCTTATCTCCAAAAAAATT+AGG | + | chr6.2:77402523-77402542 | None:intergenic | 25.0% |
| ! | TCTTATCACTTATATGTTTG+TGG | + | chr6.2:77403334-77403353 | None:intergenic | 25.0% |
| ! | TGAAATATTGATACTGCATT+AGG | - | chr6.2:77404264-77404283 | MS.gene05216:intron | 25.0% |
| ! | TGAATAAGTTTGACTCAAAA+TGG | + | chr6.2:77405089-77405108 | None:intergenic | 25.0% |
| ! | TGTTAGGTTTGAAAATGATA+AGG | - | chr6.2:77402451-77402470 | MS.gene05216:CDS | 25.0% |
| !! | ATGTTTTATACCTTTCTAAG+AGG | + | chr6.2:77404241-77404260 | None:intergenic | 25.0% |
| !! | GATTTTTCTTTGTCAAAACT+TGG | - | chr6.2:77401848-77401867 | MS.gene05216:CDS | 25.0% |
| !! | TAAGGAATAGTCAAGATTTT+CGG | - | chr6.2:77402469-77402488 | MS.gene05216:CDS | 25.0% |
| !! | TCTTGTATTTCAGATTTTGA+CGG | - | chr6.2:77402259-77402278 | MS.gene05216:CDS | 25.0% |
| !!! | ATGTAATACCATTTTAGTTG+AGG | + | chr6.2:77405934-77405953 | None:intergenic | 25.0% |
| !!! | CTACAGTATCCTAATTTTTT+TGG | - | chr6.2:77402511-77402530 | MS.gene05216:CDS | 25.0% |
| !!! | GCACTTTTTCAAATTATTAC+TGG | - | chr6.2:77404608-77404627 | MS.gene05216:intron | 25.0% |
| !!! | TCCTAATTTTTTTGGAGATA+AGG | - | chr6.2:77402519-77402538 | MS.gene05216:CDS | 25.0% |
| !!! | TGTAATACCATTTTAGTTGA+GGG | + | chr6.2:77405933-77405952 | None:intergenic | 25.0% |
| !!! | TTCAGTTTTAGTTTCTTATG+GGG | - | chr6.2:77404963-77404982 | MS.gene05216:intron | 25.0% |
| !!! | TTTTTGATAGTATGCTTGTT+AGG | - | chr6.2:77402435-77402454 | MS.gene05216:CDS | 25.0% |
| AATCAAACTAAGACCTAAAG+AGG | + | chr6.2:77403152-77403171 | None:intergenic | 30.0% | |
| ACATAGGCAACATTTAATCA+AGG | + | chr6.2:77404702-77404721 | None:intergenic | 30.0% | |
| ACTGTTGTGTTAAAATGTGT+GGG | + | chr6.2:77404387-77404406 | None:intergenic | 30.0% | |
| AGGAAGCAAGTGAAATTATT+GGG | - | chr6.2:77404933-77404952 | MS.gene05216:intron | 30.0% | |
| ATATGTACTACAGTGGTTAA+TGG | - | chr6.2:77402731-77402750 | MS.gene05216:intron | 30.0% | |
| ATCCAAATCCATATAATCAC+AGG | + | chr6.2:77404347-77404366 | None:intergenic | 30.0% | |
| ATGGCAATACCTTTCTATTT+AGG | - | chr6.2:77406495-77406514 | MS.gene05216:CDS | 30.0% | |
| ATGTTTGTGAGCCAAATAAT+CGG | - | chr6.2:77406207-77406226 | MS.gene05216:intron | 30.0% | |
| ATTAATGTATCAGTTCTCCT+TGG | - | chr6.2:77405314-77405333 | MS.gene05216:intron | 30.0% | |
| ATTTGTCTCGTTCTAATTTG+GGG | - | chr6.2:77405206-77405225 | MS.gene05216:intron | 30.0% | |
| CACAGCAATATATATTAACG+AGG | - | chr6.2:77403408-77403427 | MS.gene05216:intron | 30.0% | |
| CATAAATTGTCACAACAAAG+AGG | - | chr6.2:77401619-77401638 | MS.gene05216:CDS | 30.0% | |
| CATTATTTGTGAGTACGTAT+AGG | + | chr6.2:77403816-77403835 | None:intergenic | 30.0% | |
| CTATACGTACTCACAAATAA+TGG | - | chr6.2:77403814-77403833 | MS.gene05216:intron | 30.0% | |
| CTATTTGTCTCGTTCTAATT+TGG | - | chr6.2:77405204-77405223 | MS.gene05216:intron | 30.0% | |
| CTTATGCAAGATTTCAAAAC+CGG | - | chr6.2:77406156-77406175 | MS.gene05216:intron | 30.0% | |
| GAGACAAATAGTTTAAACGA+AGG | + | chr6.2:77405195-77405214 | None:intergenic | 30.0% | |
| GATATTGTTTGTTTGGGAAA+AGG | - | chr6.2:77406554-77406573 | MS.gene05216:CDS | 30.0% | |
| GATTAATTACATTCAGTGGA+TGG | + | chr6.2:77405575-77405594 | None:intergenic | 30.0% | |
| GATTGTGGTAAACTTGATTA+AGG | - | chr6.2:77406428-77406447 | MS.gene05216:CDS | 30.0% | |
| GGTAAACTTGATTAAGGATT+CGG | - | chr6.2:77406434-77406453 | MS.gene05216:CDS | 30.0% | |
| GTAAGGTGAAGCAAATTAAA+GGG | + | chr6.2:77405616-77405635 | None:intergenic | 30.0% | |
| GTACGATTAATTACATTCAG+TGG | + | chr6.2:77405579-77405598 | None:intergenic | 30.0% | |
| GTATTCTCTTGTCTAGTAAA+AGG | + | chr6.2:77401910-77401929 | None:intergenic | 30.0% | |
| TAGAAAATCCAAAAGACACA+AGG | + | chr6.2:77406258-77406277 | None:intergenic | 30.0% | |
| TAGAGAAGAAAAAATCGTTG+TGG | + | chr6.2:77403295-77403314 | None:intergenic | 30.0% | |
| TAGTCAAATATGTACTACAG+TGG | - | chr6.2:77402724-77402743 | MS.gene05216:intron | 30.0% | |
| TCAAAATCTGCATTGAATTC+TGG | + | chr6.2:77404454-77404473 | None:intergenic | 30.0% | |
| TCATGTTGAAATTTGATGTG+TGG | - | chr6.2:77402059-77402078 | MS.gene05216:CDS | 30.0% | |
| TCCACTGAAAATAAATTCTG+TGG | - | chr6.2:77403529-77403548 | MS.gene05216:CDS | 30.0% | |
| TCTACACTTTATATTGGTGT+GGG | - | chr6.2:77405272-77405291 | MS.gene05216:intron | 30.0% | |
| TGGTCTATACAACTTTGTTA+AGG | - | chr6.2:77405684-77405703 | MS.gene05216:intron | 30.0% | |
| TGTAAGGTGAAGCAAATTAA+AGG | + | chr6.2:77405617-77405636 | None:intergenic | 30.0% | |
| TTAAAGATCAGATTCCTACA+TGG | - | chr6.2:77405845-77405864 | MS.gene05216:intron | 30.0% | |
| TTCTACACTTTATATTGGTG+TGG | - | chr6.2:77405271-77405290 | MS.gene05216:intron | 30.0% | |
| TTGACTATACAAACCCAATA+AGG | + | chr6.2:77405722-77405741 | None:intergenic | 30.0% | |
| TTTGATGTTATGCATGTGAA+AGG | - | chr6.2:77403972-77403991 | MS.gene05216:intron | 30.0% | |
| ! | AGATAAGGATTTGAGATAAG+AGG | - | chr6.2:77402534-77402553 | MS.gene05216:CDS | 30.0% |
| ! | ATAAGGATTTGAGATAAGAG+GGG | - | chr6.2:77402536-77402555 | MS.gene05216:CDS | 30.0% |
| ! | ATGTATGATGTAACCCATTT+TGG | - | chr6.2:77403083-77403102 | MS.gene05216:intron | 30.0% |
| ! | CAAAACTTGGACTAAGTTTT+TGG | - | chr6.2:77401861-77401880 | MS.gene05216:CDS | 30.0% |
| ! | CTCAGACAAAAGTGATTTTA+AGG | - | chr6.2:77404147-77404166 | MS.gene05216:CDS | 30.0% |
| ! | GATAAGGATTTGAGATAAGA+GGG | - | chr6.2:77402535-77402554 | MS.gene05216:CDS | 30.0% |
| ! | GTTTTCAATATTTCACTGTC+TGG | - | chr6.2:77402784-77402803 | MS.gene05216:intron | 30.0% |
| ! | TAATTTCACCTTGTGTCTTT+TGG | - | chr6.2:77406247-77406266 | MS.gene05216:intron | 30.0% |
| ! | TTCAAGTTAACATATCCAAG+TGG | - | chr6.2:77404749-77404768 | MS.gene05216:intron | 30.0% |
| ! | TTTTTCTTCTCTACGTATCT+CGG | - | chr6.2:77403302-77403321 | MS.gene05216:CDS | 30.0% |
| ! | TTTTTGTCAGGATTAGAACT+CGG | - | chr6.2:77402306-77402325 | MS.gene05216:CDS | 30.0% |
| !! | AAACTAGCCATTTTCTCAAT+CGG | - | chr6.2:77406045-77406064 | MS.gene05216:intron | 30.0% |
| !! | ATTGACTTTTATGTGTTCCT+AGG | + | chr6.2:77406296-77406315 | None:intergenic | 30.0% |
| !! | CTTAAAATCACTTTTGTCTG+AGG | + | chr6.2:77404149-77404168 | None:intergenic | 30.0% |
| !! | GAATTTATTTTCAGTGGAAG+TGG | + | chr6.2:77403527-77403546 | None:intergenic | 30.0% |
| !! | GATTTTAAGGATCCTAAGTT+GGG | - | chr6.2:77404160-77404179 | MS.gene05216:CDS | 30.0% |
| !! | TCCACAGAATTTATTTTCAG+TGG | + | chr6.2:77403533-77403552 | None:intergenic | 30.0% |
| !! | TGATTTTAAGGATCCTAAGT+TGG | - | chr6.2:77404159-77404178 | MS.gene05216:CDS | 30.0% |
| !! | TTTTCCTTTTCTACTTTTCC+AGG | - | chr6.2:77404913-77404932 | MS.gene05216:intron | 30.0% |
| !!! | CTCTTTGTTGTTAGCTTTTT+GGG | - | chr6.2:77404199-77404218 | MS.gene05216:intron | 30.0% |
| !!! | TCTCTTTGTTGTTAGCTTTT+TGG | - | chr6.2:77404198-77404217 | MS.gene05216:intron | 30.0% |
| !!! | TTTCGGCAGAGTTTTTTTTT+AGG | - | chr6.2:77402486-77402505 | MS.gene05216:CDS | 30.0% |
| AAACATTGAGTATGGTACAG+TGG | + | chr6.2:77404839-77404858 | None:intergenic | 35.0% | |
| AAATAATCGGCACAACAATG+GGG | - | chr6.2:77406220-77406239 | MS.gene05216:intron | 35.0% | |
| AAATCGTGCTTGACTGTATT+CGG | - | chr6.2:77405501-77405520 | MS.gene05216:intron | 35.0% | |
| ACAAGGATTCAGTTCTTTAC+CGG | - | chr6.2:77406365-77406384 | MS.gene05216:CDS | 35.0% | |
| ACATCTTCCCTCAACTAAAA+TGG | - | chr6.2:77405923-77405942 | MS.gene05216:intron | 35.0% | |
| ACTTATTAGTACCATCATGG+AGG | - | chr6.2:77401698-77401717 | MS.gene05216:CDS | 35.0% | |
| AGAAGAAAAAATCGTTGTGG+CGG | + | chr6.2:77403292-77403311 | None:intergenic | 35.0% | |
| AGCACTTATTAGTACCATCA+TGG | - | chr6.2:77401695-77401714 | MS.gene05216:CDS | 35.0% | |
| AGTATCAACCCTATCATTTG+TGG | + | chr6.2:77406721-77406740 | None:intergenic | 35.0% | |
| ATATGGATTTGGATTGCATG+CGG | - | chr6.2:77404353-77404372 | MS.gene05216:intron | 35.0% | |
| ATGATCAATGTTGTCAATCG+CGG | + | chr6.2:77403901-77403920 | None:intergenic | 35.0% | |
| ATTGTCAAATAGCGGCTATA+GGG | - | chr6.2:77403632-77403651 | MS.gene05216:intron | 35.0% | |
| CAAATAATCGGCACAACAAT+GGG | - | chr6.2:77406219-77406238 | MS.gene05216:intron | 35.0% | |
| CAATAATTTCACTTGCTTCC+TGG | + | chr6.2:77404934-77404953 | None:intergenic | 35.0% | |
| CACATGTCAATGGCAAAATA+AGG | + | chr6.2:77406522-77406541 | None:intergenic | 35.0% | |
| CACCTGTGATTATATGGATT+TGG | - | chr6.2:77404342-77404361 | MS.gene05216:intron | 35.0% | |
| CACTGTTGTGTTAAAATGTG+TGG | + | chr6.2:77404388-77404407 | None:intergenic | 35.0% | |
| CAGGAAGCAAGTGAAATTAT+TGG | - | chr6.2:77404932-77404951 | MS.gene05216:intron | 35.0% | |
| CATGTTCACTCATACCAAAT+AGG | + | chr6.2:77404114-77404133 | None:intergenic | 35.0% | |
| CATTCACGTAGTTAGTACTT+TGG | + | chr6.2:77404541-77404560 | None:intergenic | 35.0% | |
| CTCACAAATAATGGCTATAG+TGG | - | chr6.2:77403823-77403842 | MS.gene05216:intron | 35.0% | |
| CTGATCATCGTAAGATAACT+CGG | + | chr6.2:77405806-77405825 | None:intergenic | 35.0% | |
| CTGATTATGATAGGAGTAGA+AGG | - | chr6.2:77402982-77403001 | MS.gene05216:CDS | 35.0% | |
| GACAAGAACTTCATGCAAAT+GGG | + | chr6.2:77406693-77406712 | None:intergenic | 35.0% | |
| GATGGTATCAATTTCAAGCT+TGG | + | chr6.2:77404498-77404517 | None:intergenic | 35.0% | |
| GATTGTCTGCAATAAACGAT+CGG | + | chr6.2:77404566-77404585 | None:intergenic | 35.0% | |
| GTAGTACATATTTGACTAGC+TGG | + | chr6.2:77402722-77402741 | None:intergenic | 35.0% | |
| GTGGAAAAAATTCCCTCATA+AGG | + | chr6.2:77403508-77403527 | None:intergenic | 35.0% | |
| TAGTCAGCATTGTCAAATAG+CGG | - | chr6.2:77403624-77403643 | MS.gene05216:intron | 35.0% | |
| TCAAATTAGTCCACCGAAAT+TGG | + | chr6.2:77403185-77403204 | None:intergenic | 35.0% | |
| TCATGACACCTGTGATTATA+TGG | - | chr6.2:77404336-77404355 | MS.gene05216:intron | 35.0% | |
| TCTTATGGGGTTTCTTTCAA+TGG | - | chr6.2:77404976-77404995 | MS.gene05216:intron | 35.0% | |
| TGACAAGAACTTCATGCAAA+TGG | + | chr6.2:77406694-77406713 | None:intergenic | 35.0% | |
| TGATCATCGTAAGATAACTC+GGG | + | chr6.2:77405805-77405824 | None:intergenic | 35.0% | |
| TGTGATTCACTTGTATGAAC+AGG | - | chr6.2:77404073-77404092 | MS.gene05216:CDS | 35.0% | |
| TGTGTTCAAATATGCAGTAG+AGG | + | chr6.2:77405478-77405497 | None:intergenic | 35.0% | |
| TTGTATGAACAGGAGGATTT+GGG | - | chr6.2:77404083-77404102 | MS.gene05216:CDS | 35.0% | |
| TTTAACACAACAGTGACCAT+TGG | - | chr6.2:77404393-77404412 | MS.gene05216:intron | 35.0% | |
| TTTCTGTATTCTTCTTGAGG+AGG | - | chr6.2:77403434-77403453 | MS.gene05216:intron | 35.0% | |
| TTTGCATGAAGTTCTTGTCA+AGG | - | chr6.2:77406694-77406713 | MS.gene05216:CDS | 35.0% | |
| ! | AACAAAGAGGTTCTAGTACA+AGG | - | chr6.2:77401632-77401651 | MS.gene05216:CDS | 35.0% |
| ! | AACTTGATTAAGGATTCGGT+TGG | - | chr6.2:77406438-77406457 | MS.gene05216:CDS | 35.0% |
| ! | ACTTTTGTCTGAGGATTGAT+TGG | + | chr6.2:77404140-77404159 | None:intergenic | 35.0% |
| ! | ATAGGCATTGCAAAATGCTA+AGG | + | chr6.2:77405983-77406002 | None:intergenic | 35.0% |
| ! | ATGCTTTGAGTCCTAATGAA+GGG | + | chr6.2:77405040-77405059 | None:intergenic | 35.0% |
| ! | CCTTAATCCTCCTGTTTTAT+GGG | - | chr6.2:77402228-77402247 | MS.gene05216:CDS | 35.0% |
| ! | CTATTTGACAATGCTGACTA+TGG | + | chr6.2:77403624-77403643 | None:intergenic | 35.0% |
| ! | GATTATTTGGCTCACAAACA+TGG | + | chr6.2:77406208-77406227 | None:intergenic | 35.0% |
| ! | GCTTCAATACTTGCTCTTTT+TGG | - | chr6.2:77406657-77406676 | MS.gene05216:CDS | 35.0% |
| ! | GTGTTTCTGTATTCTTCTTG+AGG | - | chr6.2:77403431-77403450 | MS.gene05216:intron | 35.0% |
| ! | TATGCTTTGAGTCCTAATGA+AGG | + | chr6.2:77405041-77405060 | None:intergenic | 35.0% |
| ! | TCCTTAATCCTCCTGTTTTA+TGG | - | chr6.2:77402227-77402246 | MS.gene05216:CDS | 35.0% |
| ! | TGTCTGGAATATATGAACCT+TGG | - | chr6.2:77402800-77402819 | MS.gene05216:intron | 35.0% |
| ! | TTAGCATTTTGCAATGCCTA+TGG | - | chr6.2:77405982-77406001 | MS.gene05216:intron | 35.0% |
| ! | TTTTGACGGTAAGTAAAGTC+TGG | - | chr6.2:77402273-77402292 | MS.gene05216:CDS | 35.0% |
| ! | TTTTGTCAGGATTAGAACTC+GGG | - | chr6.2:77402307-77402326 | MS.gene05216:CDS | 35.0% |
| !! | AAAAGAGCAAGTATTGAAGC+AGG | + | chr6.2:77406657-77406676 | None:intergenic | 35.0% |
| !! | GATAGGGTTGATACTTTCTT+AGG | - | chr6.2:77406726-77406745 | MS.gene05216:CDS | 35.0% |
| !! | TGATATGTGGTGATGGAATA+TGG | - | chr6.2:77406625-77406644 | MS.gene05216:CDS | 35.0% |
| !! | TTTTTCCTGTTGCTATTCCA+AGG | + | chr6.2:77402820-77402839 | None:intergenic | 35.0% |
| !!! | GAAAATGGCTAGTTTTCCAT+AGG | + | chr6.2:77406040-77406059 | None:intergenic | 35.0% |
| !!! | TCTTCTGGAATTGCTTTTAG+TGG | - | chr6.2:77401955-77401974 | MS.gene05216:CDS | 35.0% |
| !!! | TTTTCCATAGGTTGATGCTA+GGG | + | chr6.2:77406028-77406047 | None:intergenic | 35.0% |
| AAATTCCCTCATAAGGCAAC+CGG | + | chr6.2:77403501-77403520 | None:intergenic | 40.0% | |
| AAGAACTTCATGCAAATGGG+AGG | + | chr6.2:77406690-77406709 | None:intergenic | 40.0% | |
| AATGTATCAGTTCTCCTTGG+AGG | - | chr6.2:77405317-77405336 | MS.gene05216:intron | 40.0% | |
| ACCACCAGATCAACCAAAAT+GGG | + | chr6.2:77403099-77403118 | None:intergenic | 40.0% | |
| ACCATCTGATCTTGATCCAA+TGG | + | chr6.2:77404412-77404431 | None:intergenic | 40.0% | |
| ACCATTGGATCAAGATCAGA+TGG | - | chr6.2:77404408-77404427 | MS.gene05216:intron | 40.0% | |
| ACTTCCAACACACATGTCAA+TGG | + | chr6.2:77406532-77406551 | None:intergenic | 40.0% | |
| AGTTGTATAGACCATCTCCA+AGG | + | chr6.2:77405678-77405697 | None:intergenic | 40.0% | |
| ATCTGTTAGTCCACAACCAT+AGG | + | chr6.2:77406001-77406020 | None:intergenic | 40.0% | |
| ATGAACCTTGGAATAGCAAC+AGG | - | chr6.2:77402812-77402831 | MS.gene05216:intron | 40.0% | |
| ATGGTCCAGAATTCAATGCA+TGG | - | chr6.2:77404427-77404446 | MS.gene05216:intron | 40.0% | |
| CAAAGCATGAGGCAATTATC+CGG | + | chr6.2:77406387-77406406 | None:intergenic | 40.0% | |
| CATTGGTACAAAAAAGGCCT+TGG | - | chr6.2:77405389-77405408 | MS.gene05216:intron | 40.0% | |
| CATTGTCAAATAGCGGCTAT+AGG | - | chr6.2:77403631-77403650 | MS.gene05216:intron | 40.0% | |
| CCAAATAATCGGCACAACAA+TGG | - | chr6.2:77406218-77406237 | MS.gene05216:intron | 40.0% | |
| CCACTAATTGCAAACCATGT+AGG | + | chr6.2:77405862-77405881 | None:intergenic | 40.0% | |
| CCCATAAAACAGGAGGATTA+AGG | + | chr6.2:77402231-77402250 | None:intergenic | 40.0% | |
| CCTCTCATAGAAACAAGAGA+GGG | - | chr6.2:77405365-77405384 | MS.gene05216:intron | 40.0% | |
| CTTGTATGAACAGGAGGATT+TGG | - | chr6.2:77404082-77404101 | MS.gene05216:CDS | 40.0% | |
| GAAGATAGGGTAGTTGACAA+TGG | - | chr6.2:77401553-77401572 | MS.gene05216:CDS | 40.0% | |
| GAGGGTCATTGGTACAAAAA+AGG | - | chr6.2:77405383-77405402 | MS.gene05216:intron | 40.0% | |
| GATTCACTTGTATGAACAGG+AGG | - | chr6.2:77404076-77404095 | MS.gene05216:CDS | 40.0% | |
| GCAATAGCACTCTAGTATAG+TGG | - | chr6.2:77403847-77403866 | MS.gene05216:intron | 40.0% | |
| GCAATTATCCATCCCAACTT+AGG | + | chr6.2:77404175-77404194 | None:intergenic | 40.0% | |
| GCATTGCAAAATGCTAAGGT+TGG | + | chr6.2:77405979-77405998 | None:intergenic | 40.0% | |
| GCGATTGACAACATTGATCA+TGG | - | chr6.2:77403900-77403919 | MS.gene05216:intron | 40.0% | |
| GCTTCCTGGAAAAGTAGAAA+AGG | + | chr6.2:77404920-77404939 | None:intergenic | 40.0% | |
| GGAAAAGGTTGACAAGGTTA+AGG | - | chr6.2:77406569-77406588 | MS.gene05216:CDS | 40.0% | |
| GGATTTGGGAGTTACCTATT+TGG | - | chr6.2:77404097-77404116 | MS.gene05216:CDS | 40.0% | |
| GGTGGTCGTTGAATCAATAT+CGG | + | chr6.2:77404520-77404539 | None:intergenic | 40.0% | |
| GTCAAATAACGGCTATACTC+TGG | - | chr6.2:77403739-77403758 | MS.gene05216:intron | 40.0% | |
| GTCAAGGTCCACAAATGATA+GGG | - | chr6.2:77406710-77406729 | MS.gene05216:CDS | 40.0% | |
| GTCATGAAAACAACACGTGT+TGG | + | chr6.2:77404323-77404342 | None:intergenic | 40.0% | |
| GTCGTTGAATCAATATCGGA+TGG | + | chr6.2:77404516-77404535 | None:intergenic | 40.0% | |
| GTGCTAACTCACACCTTATT+GGG | - | chr6.2:77405706-77405725 | MS.gene05216:intron | 40.0% | |
| TAGAAACAAGAGAGGGTCAT+TGG | - | chr6.2:77405372-77405391 | MS.gene05216:intron | 40.0% | |
| TCAAGGAATCCAAGGTTACA+GGG | - | chr6.2:77405424-77405443 | MS.gene05216:intron | 40.0% | |
| TCACGTAGTTAGTACTTTGG+TGG | + | chr6.2:77404538-77404557 | None:intergenic | 40.0% | |
| TCTTGGTATAAGCTGAACCA+TGG | + | chr6.2:77402904-77402923 | None:intergenic | 40.0% | |
| TGAAACTTACCCTGTAACCT+TGG | + | chr6.2:77405436-77405455 | None:intergenic | 40.0% | |
| TGGGTTTGTATAGTCAACTC+CGG | - | chr6.2:77405725-77405744 | MS.gene05216:intron | 40.0% | |
| TGTAACCTTGGATTCCTTGA+AGG | + | chr6.2:77405424-77405443 | None:intergenic | 40.0% | |
| TGTCAAGGTCCACAAATGAT+AGG | - | chr6.2:77406709-77406728 | MS.gene05216:CDS | 40.0% | |
| TGTTTGGGAAAAGGTTGACA+AGG | - | chr6.2:77406563-77406582 | MS.gene05216:CDS | 40.0% | |
| TTCAAGGAATCCAAGGTTAC+AGG | - | chr6.2:77405423-77405442 | MS.gene05216:intron | 40.0% | |
| TTCTTTCTTGGGGAGTAATG+TGG | - | chr6.2:77405342-77405361 | MS.gene05216:intron | 40.0% | |
| TTGCGGTACACAATTGCATA+GGG | + | chr6.2:77406327-77406346 | None:intergenic | 40.0% | |
| TTGTCAAATAGCGGCTATAG+GGG | - | chr6.2:77403633-77403652 | MS.gene05216:intron | 40.0% | |
| TTTAGTTGAGGGAAGATGTG+CGG | + | chr6.2:77405922-77405941 | None:intergenic | 40.0% | |
| TTTCAAGCCTTCCCTTCATT+AGG | - | chr6.2:77405026-77405045 | MS.gene05216:intron | 40.0% | |
| TTTGAGTCCTAATGAAGGGA+AGG | + | chr6.2:77405036-77405055 | None:intergenic | 40.0% | |
| TTTGCCATTGACATGTGTGT+TGG | - | chr6.2:77406525-77406544 | MS.gene05216:CDS | 40.0% | |
| ! | ACTTGTGTTGTTGCTTCTTC+TGG | - | chr6.2:77401940-77401959 | MS.gene05216:CDS | 40.0% |
| ! | ATGGTTGTGGACTAACAGAT+TGG | - | chr6.2:77406001-77406020 | MS.gene05216:intron | 40.0% |
| ! | ATTCTCTCTGGTGCCAATTT+CGG | - | chr6.2:77403169-77403188 | MS.gene05216:intron | 40.0% |
| ! | CCTACATGGTTTGCAATTAG+TGG | - | chr6.2:77405859-77405878 | MS.gene05216:intron | 40.0% |
| ! | CCTCCTGTTTTATGGGAAAA+GGG | - | chr6.2:77402235-77402254 | MS.gene05216:CDS | 40.0% |
| ! | CTTTTATGTGTTCCTAGGTC+AGG | + | chr6.2:77406291-77406310 | None:intergenic | 40.0% |
| ! | GATTAAGGATTCGGTTGGTA+AGG | - | chr6.2:77406443-77406462 | MS.gene05216:CDS | 40.0% |
| ! | GGTCTTAGTTTGATTCTCTC+TGG | - | chr6.2:77403157-77403176 | MS.gene05216:intron | 40.0% |
| ! | GTTAACTGATTCCTCCATGA+TGG | + | chr6.2:77401712-77401731 | None:intergenic | 40.0% |
| ! | TACAAAGCATTTCCTGACCT+AGG | - | chr6.2:77406276-77406295 | MS.gene05216:intron | 40.0% |
| ! | TATACAGCTACTGATGGATG+TGG | - | chr6.2:77405002-77405021 | MS.gene05216:intron | 40.0% |
| ! | TCCTCCTGTTTTATGGGAAA+AGG | - | chr6.2:77402234-77402253 | MS.gene05216:CDS | 40.0% |
| ! | TCTGGTTTGATATGTGGTGA+TGG | - | chr6.2:77406618-77406637 | MS.gene05216:CDS | 40.0% |
| ! | TGGTTCTATACAGCTACTGA+TGG | - | chr6.2:77404996-77405015 | MS.gene05216:intron | 40.0% |
| ! | TTAAGGATCCTAAGTTGGGA+TGG | - | chr6.2:77404164-77404183 | MS.gene05216:CDS | 40.0% |
| ! | TTTGCTAGTTTAGCTCCTTG+AGG | + | chr6.2:77404812-77404831 | None:intergenic | 40.0% |
| ! | TTTTGCAATGCCTATGGTTG+TGG | - | chr6.2:77405988-77406007 | MS.gene05216:intron | 40.0% |
| !! | AAAGGTATTGCCATAGCCAT+TGG | + | chr6.2:77406489-77406508 | None:intergenic | 40.0% |
| !! | ACGTGTTCACTCTGAAATGT+CGG | + | chr6.2:77404291-77404310 | None:intergenic | 40.0% |
| !! | CCATTGTTGTGCCGATTATT+TGG | + | chr6.2:77406221-77406240 | None:intergenic | 40.0% |
| !! | GTTGCTTCTGGTTTGATATG+TGG | - | chr6.2:77406612-77406631 | MS.gene05216:CDS | 40.0% |
| !!! | AATGTCTCTGCTGGTCTTTT+GGG | - | chr6.2:77401826-77401845 | MS.gene05216:CDS | 40.0% |
| !!! | GGTCGATGATTGTTTTTGTC+AGG | - | chr6.2:77402294-77402313 | MS.gene05216:CDS | 40.0% |
| !!! | GTAACCCATTTTGGTTGATC+TGG | - | chr6.2:77403092-77403111 | MS.gene05216:intron | 40.0% |
| !!! | GTTTTCCATAGGTTGATGCT+AGG | + | chr6.2:77406029-77406048 | None:intergenic | 40.0% |
| !!! | TAATGTCTCTGCTGGTCTTT+TGG | - | chr6.2:77401825-77401844 | MS.gene05216:CDS | 40.0% |
| AATTCCCTCATAAGGCAACC+GGG | + | chr6.2:77403500-77403519 | None:intergenic | 45.0% | |
| AGAAAAAATCGTTGTGGCGG+CGG | + | chr6.2:77403289-77403308 | None:intergenic | 45.0% | |
| ATAGCCATAGCCATGATCCT+TGG | - | chr6.2:77405658-77405677 | MS.gene05216:intron | 45.0% | |
| ATAGCCATGATCCTTGGAGA+TGG | - | chr6.2:77405664-77405683 | MS.gene05216:intron | 45.0% | |
| ATCAAACCAGAAGCAACAGC+AGG | + | chr6.2:77406609-77406628 | None:intergenic | 45.0% | |
| ATCTCCAAGGATCATGGCTA+TGG | + | chr6.2:77405665-77405684 | None:intergenic | 45.0% | |
| ATGCTAAGGTTGGAGCAATC+AGG | + | chr6.2:77405969-77405988 | None:intergenic | 45.0% | |
| ATTGCCATAGCCATTGGAAG+TGG | + | chr6.2:77406483-77406502 | None:intergenic | 45.0% | |
| ATTGCTGTGTTGGGCTATGA+GGG | + | chr6.2:77403397-77403416 | None:intergenic | 45.0% | |
| CACCACCAGATCAACCAAAA+TGG | + | chr6.2:77403100-77403119 | None:intergenic | 45.0% | |
| CATACCACTTCCAATGGCTA+TGG | - | chr6.2:77406476-77406495 | MS.gene05216:CDS | 45.0% | |
| CCAGCAGAGACATTAAGTGA+AGG | + | chr6.2:77401820-77401839 | None:intergenic | 45.0% | |
| CCTGCAGAACTCAATGTGTA+AGG | + | chr6.2:77405633-77405652 | None:intergenic | 45.0% | |
| CCTTACACATTGAGTTCTGC+AGG | - | chr6.2:77405630-77405649 | MS.gene05216:intron | 45.0% | |
| CCTTCACTTAATGTCTCTGC+TGG | - | chr6.2:77401817-77401836 | MS.gene05216:CDS | 45.0% | |
| CCTTGGAGGAGTTCTTTCTT+GGG | - | chr6.2:77405331-77405350 | MS.gene05216:intron | 45.0% | |
| CTAAAGAGGAACACACTCCA+AGG | + | chr6.2:77403138-77403157 | None:intergenic | 45.0% | |
| CTCAGTTGTGCCTCTTAGAA+AGG | - | chr6.2:77404228-77404247 | MS.gene05216:intron | 45.0% | |
| CTGGACCATGCATTGAATTC+TGG | + | chr6.2:77404435-77404454 | None:intergenic | 45.0% | |
| CTGTATTCTTCTTGAGGAGG+AGG | - | chr6.2:77403437-77403456 | MS.gene05216:intron | 45.0% | |
| CTTGGAGGAGTTCTTTCTTG+GGG | - | chr6.2:77405332-77405351 | MS.gene05216:intron | 45.0% | |
| CTTGGAGTGTGTTCCTCTTT+AGG | - | chr6.2:77403136-77403155 | MS.gene05216:intron | 45.0% | |
| GAGGTTCATACCACTTCCAA+TGG | - | chr6.2:77406470-77406489 | MS.gene05216:CDS | 45.0% | |
| GCCTCTCATAGAAACAAGAG+AGG | - | chr6.2:77405364-77405383 | MS.gene05216:intron | 45.0% | |
| GGGTTTGTATAGTCAACTCC+GGG | - | chr6.2:77405726-77405745 | MS.gene05216:intron | 45.0% | |
| GGTGCTAACTCACACCTTAT+TGG | - | chr6.2:77405705-77405724 | MS.gene05216:intron | 45.0% | |
| GTTGCGGTACACAATTGCAT+AGG | + | chr6.2:77406328-77406347 | None:intergenic | 45.0% | |
| TAAGATAACTCGGGACTCGA+GGG | + | chr6.2:77405796-77405815 | None:intergenic | 45.0% | |
| TAGACCATCTCCAAGGATCA+TGG | + | chr6.2:77405671-77405690 | None:intergenic | 45.0% | |
| TATTGCTGTGTTGGGCTATG+AGG | + | chr6.2:77403398-77403417 | None:intergenic | 45.0% | |
| TCCTTGGAGGAGTTCTTTCT+TGG | - | chr6.2:77405330-77405349 | MS.gene05216:intron | 45.0% | |
| TGCAATTGTGTACCGCAACA+TGG | - | chr6.2:77406329-77406348 | MS.gene05216:CDS | 45.0% | |
| TGGGTCAAGACATTGGGTTT+AGG | + | chr6.2:77403359-77403378 | None:intergenic | 45.0% | |
| TTCTTCTCTACGTATCTCGG+CGG | - | chr6.2:77403305-77403324 | MS.gene05216:CDS | 45.0% | |
| TTGGTATCACATATCTGCCC+CGG | - | chr6.2:77403479-77403498 | MS.gene05216:CDS | 45.0% | |
| TTTCAGAGTGAACACGTGTC+TGG | - | chr6.2:77404294-77404313 | MS.gene05216:intron | 45.0% | |
| ! | ACTAGGTTGGGTCAAGACAT+TGG | + | chr6.2:77403366-77403385 | None:intergenic | 45.0% |
| ! | ATGTTGTCAATCGCGGATTG+AGG | + | chr6.2:77403894-77403913 | None:intergenic | 45.0% |
| ! | CATTTTCTCAATCGGAGCGT+GGG | - | chr6.2:77406053-77406072 | MS.gene05216:intron | 45.0% |
| ! | CCCTTTTCCCATAAAACAGG+AGG | + | chr6.2:77402238-77402257 | None:intergenic | 45.0% |
| ! | CTAGGTTGGGTCAAGACATT+GGG | + | chr6.2:77403365-77403384 | None:intergenic | 45.0% |
| ! | GAGCCCTTTTCCCATAAAAC+AGG | + | chr6.2:77402241-77402260 | None:intergenic | 45.0% |
| ! | GAGGGGTTTAGTGTTGAACT+TGG | - | chr6.2:77402553-77402572 | MS.gene05216:CDS | 45.0% |
| ! | TTTGGTTGATCTGGTGGTGA+TGG | - | chr6.2:77403101-77403120 | MS.gene05216:intron | 45.0% |
| !! | AAGGATTCGGTTGGTAAGGT+AGG | - | chr6.2:77406447-77406466 | MS.gene05216:CDS | 45.0% |
| !! | AGGATTCGGTTGGTAAGGTA+GGG | - | chr6.2:77406448-77406467 | MS.gene05216:CDS | 45.0% |
| !! | CCCTCTCTTGTTTCTATGAG+AGG | + | chr6.2:77405368-77405387 | None:intergenic | 45.0% |
| !!! | ACCCATTTTGGTTGATCTGG+TGG | - | chr6.2:77403095-77403114 | MS.gene05216:intron | 45.0% |
| !! | TTTATATTTAATTAATAGTT+TGG | - | chr6.2:77403059-77403078 | MS.gene05216:intron | 5.0% |
| AACAGCTTCCACACTCCTCA+AGG | - | chr6.2:77404794-77404813 | MS.gene05216:intron | 50.0% | |
| ACACAATTGCATAGGGCGCA+GGG | + | chr6.2:77406320-77406339 | None:intergenic | 50.0% | |
| AGAGATGTCAACGTGACAGC+TGG | - | chr6.2:77403236-77403255 | MS.gene05216:CDS | 50.0% | |
| AGATGTCAACGTGACAGCTG+GGG | - | chr6.2:77403238-77403257 | MS.gene05216:CDS | 50.0% | |
| AGCGACCTTCAAGGAATCCA+AGG | - | chr6.2:77405416-77405435 | MS.gene05216:intron | 50.0% | |
| ATGGCGATACTCGGAGTACA+AGG | - | chr6.2:77406348-77406367 | MS.gene05216:CDS | 50.0% | |
| ATTCCCTCATAAGGCAACCG+GGG | + | chr6.2:77403499-77403518 | None:intergenic | 50.0% | |
| ATTCTTTGGCGCAGCGATTG+TGG | - | chr6.2:77406413-77406432 | MS.gene05216:CDS | 50.0% | |
| CCACGCTCCGATTGAGAAAA+TGG | + | chr6.2:77406055-77406074 | None:intergenic | 50.0% | |
| CCCAAGAAAGAACTCCTCCA+AGG | + | chr6.2:77405334-77405353 | None:intergenic | 50.0% | |
| GAGATGTCAACGTGACAGCT+GGG | - | chr6.2:77403237-77403256 | MS.gene05216:CDS | 50.0% | |
| GATGTTCATCATGACTCCGC+AGG | + | chr6.2:77406118-77406137 | None:intergenic | 50.0% | |
| GTAAGATAACTCGGGACTCG+AGG | + | chr6.2:77405797-77405816 | None:intergenic | 50.0% | |
| TACACAATTGCATAGGGCGC+AGG | + | chr6.2:77406321-77406340 | None:intergenic | 50.0% | |
| TACCGCAACATGGCGATACT+CGG | - | chr6.2:77406339-77406358 | MS.gene05216:CDS | 50.0% | |
| TCAACTCCGGGACAAACGAA+GGG | - | chr6.2:77405738-77405757 | MS.gene05216:intron | 50.0% | |
| TCGTGCTTGACTGTATTCGG+TGG | - | chr6.2:77405504-77405523 | MS.gene05216:intron | 50.0% | |
| TGAGCAGTTGCAGTACCACT+TGG | + | chr6.2:77404767-77404786 | None:intergenic | 50.0% | |
| TGGCTCACAAACATGGATCG+CGG | + | chr6.2:77406201-77406220 | None:intergenic | 50.0% | |
| TGGTCCCTAGCATCAACCTA+TGG | - | chr6.2:77406021-77406040 | MS.gene05216:intron | 50.0% | |
| TGTCTTGACCCAACCTAGTG+AGG | - | chr6.2:77403367-77403386 | MS.gene05216:intron | 50.0% | |
| TTGCTGTGTTGGGCTATGAG+GGG | + | chr6.2:77403396-77403415 | None:intergenic | 50.0% | |
| ! | CCATTTTCTCAATCGGAGCG+TGG | - | chr6.2:77406052-77406071 | MS.gene05216:intron | 50.0% |
| ! | GCTTGACTGTATTCGGTGGA+TGG | - | chr6.2:77405508-77405527 | MS.gene05216:intron | 50.0% |
| ! | GTTTAGCTCCTTGAGGAGTG+TGG | + | chr6.2:77404805-77404824 | None:intergenic | 50.0% |
| ! | TTTGCACCTGCTGTTGCTTC+TGG | - | chr6.2:77406600-77406619 | MS.gene05216:CDS | 50.0% |
| !! | ATTCGGTTGGTAAGGTAGGG+AGG | - | chr6.2:77406451-77406470 | MS.gene05216:CDS | 50.0% |
| AGGGAAGATGTGCGGCAATG+TGG | + | chr6.2:77405914-77405933 | None:intergenic | 55.0% | |
| AGGGGGAACCTCACTAGGTT+GGG | + | chr6.2:77403378-77403397 | None:intergenic | 55.0% | |
| CAAAACCGGCTACCTTACCC+TGG | - | chr6.2:77406170-77406189 | MS.gene05216:intron | 55.0% | |
| CATCTGCCCTTCGTTTGTCC+CGG | + | chr6.2:77405747-77405766 | None:intergenic | 55.0% | |
| CTATGAGGGGGAACCTCACT+AGG | + | chr6.2:77403383-77403402 | None:intergenic | 55.0% | |
| CTTGAAGGTCGCTGTCACCA+AGG | + | chr6.2:77405409-77405428 | None:intergenic | 55.0% | |
| GGAGAGTCTTGATCCGCAAC+AGG | + | chr6.2:77405775-77405794 | None:intergenic | 55.0% | |
| GGCAGATGCTCTACCTGTTG+CGG | - | chr6.2:77405759-77405778 | MS.gene05216:intron | 55.0% | |
| GTCAACTCCGGGACAAACGA+AGG | - | chr6.2:77405737-77405756 | MS.gene05216:intron | 55.0% | |
| TCTTCTTGAGGAGGAGGACC+CGG | - | chr6.2:77403443-77403462 | MS.gene05216:intron | 55.0% | |
| TGCTGTGTTGGGCTATGAGG+GGG | + | chr6.2:77403395-77403414 | None:intergenic | 55.0% | |
| ! | CTCCGAGTATCGCCATGTTG+CGG | + | chr6.2:77406344-77406363 | None:intergenic | 55.0% |
| ! | CTCTCTGGTGCCAATTTCGG+TGG | - | chr6.2:77403172-77403191 | MS.gene05216:intron | 55.0% |
| ! | CTTGGTGACAGCGACCTTCA+AGG | - | chr6.2:77405407-77405426 | MS.gene05216:intron | 55.0% |
| !! | CTGGTGGTGATGGCTTGCTT+GGG | - | chr6.2:77403111-77403130 | MS.gene05216:intron | 55.0% |
| !! | CTTGCTAGTCTTGCAGCCTG+CGG | - | chr6.2:77406099-77406118 | MS.gene05216:intron | 55.0% |
| !! | TCTGGTGGTGATGGCTTGCT+TGG | - | chr6.2:77403110-77403129 | MS.gene05216:intron | 55.0% |
| !! | TGATGGCTTGCTTGGGACCT+TGG | - | chr6.2:77403118-77403137 | MS.gene05216:intron | 55.0% |
| CGAAGCCAGGGTAAGGTAGC+CGG | + | chr6.2:77406178-77406197 | None:intergenic | 60.0% | |
| CTGCCCCGGTTGCCTTATGA+GGG | - | chr6.2:77403493-77403512 | MS.gene05216:CDS | 60.0% | |
| GAGGGGGAACCTCACTAGGT+TGG | + | chr6.2:77403379-77403398 | None:intergenic | 60.0% | |
| TCTGCCCCGGTTGCCTTATG+AGG | - | chr6.2:77403492-77403511 | MS.gene05216:CDS | 60.0% | |
| TGTCAACGTGACAGCTGGGG+CGG | - | chr6.2:77403241-77403260 | MS.gene05216:CDS | 60.0% | |
| TTCTCAATCGGAGCGTGGGC+TGG | - | chr6.2:77406057-77406076 | MS.gene05216:intron | 60.0% | |
| !! | TGGGCTGGTGCATCACATGG+TGG | - | chr6.2:77406072-77406091 | MS.gene05216:intron | 60.0% |
| ACATGGATCGCGGCGAAGCC+AGG | + | chr6.2:77406191-77406210 | None:intergenic | 65.0% | |
| ATCGCGGCGAAGCCAGGGTA+AGG | + | chr6.2:77406185-77406204 | None:intergenic | 65.0% | |
| CATGGATCGCGGCGAAGCCA+GGG | + | chr6.2:77406190-77406209 | None:intergenic | 65.0% | |
| GTCAACGTGACAGCTGGGGC+GGG | - | chr6.2:77403242-77403261 | MS.gene05216:CDS | 65.0% | |
| TCTTGAGGAGGAGGACCCGG+CGG | - | chr6.2:77403446-77403465 | MS.gene05216:intron | 65.0% | |
| !! | GCGTGGGCTGGTGCATCACA+TGG | - | chr6.2:77406069-77406088 | MS.gene05216:intron | 65.0% |
| CTTGAGGAGGAGGACCCGGC+GGG | - | chr6.2:77403447-77403466 | MS.gene05216:intron | 70.0% | |
| TACCAAGCCGCCTACCCCGC+CGG | + | chr6.2:77403465-77403484 | None:intergenic | 70.0% | |
| TTGAGGAGGAGGACCCGGCG+GGG | - | chr6.2:77403448-77403467 | MS.gene05216:intron | 70.0% | |
| ACCAAGCCGCCTACCCCGCC+GGG | + | chr6.2:77403464-77403483 | None:intergenic | 75.0% | |
| ! | ACCCGGCGGGGTAGGCGGCT+TGG | - | chr6.2:77403460-77403479 | MS.gene05216:CDS | 80.0% |
| ! | GGAGGACCCGGCGGGGTAGG+CGG | - | chr6.2:77403455-77403474 | MS.gene05216:intron | 80.0% |
| ! | GGAGGAGGACCCGGCGGGGT+AGG | - | chr6.2:77403452-77403471 | MS.gene05216:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 77401532 | 77406755 | 77401532 | ID=MS.gene05216 |
| chr6.2 | mRNA | 77401532 | 77406755 | 77401532 | ID=MS.gene05216.t1;Parent=MS.gene05216 |
| chr6.2 | exon | 77406311 | 77406755 | 77406311 | ID=MS.gene05216.t1.exon1;Parent=MS.gene05216.t1 |
| chr6.2 | CDS | 77406311 | 77406755 | 77406311 | ID=cds.MS.gene05216.t1;Parent=MS.gene05216.t1 |
| chr6.2 | exon | 77404038 | 77404192 | 77404038 | ID=MS.gene05216.t1.exon2;Parent=MS.gene05216.t1 |
| chr6.2 | CDS | 77404038 | 77404192 | 77404038 | ID=cds.MS.gene05216.t1;Parent=MS.gene05216.t1 |
| chr6.2 | exon | 77403456 | 77403553 | 77403456 | ID=MS.gene05216.t1.exon3;Parent=MS.gene05216.t1 |
| chr6.2 | CDS | 77403456 | 77403553 | 77403456 | ID=cds.MS.gene05216.t1;Parent=MS.gene05216.t1 |
| chr6.2 | exon | 77403218 | 77403352 | 77403218 | ID=MS.gene05216.t1.exon4;Parent=MS.gene05216.t1 |
| chr6.2 | CDS | 77403218 | 77403352 | 77403218 | ID=cds.MS.gene05216.t1;Parent=MS.gene05216.t1 |
| chr6.2 | exon | 77402842 | 77403031 | 77402842 | ID=MS.gene05216.t1.exon5;Parent=MS.gene05216.t1 |
| chr6.2 | CDS | 77402842 | 77403031 | 77402842 | ID=cds.MS.gene05216.t1;Parent=MS.gene05216.t1 |
| chr6.2 | exon | 77401532 | 77402635 | 77401532 | ID=MS.gene05216.t1.exon6;Parent=MS.gene05216.t1 |
| chr6.2 | CDS | 77401532 | 77402635 | 77401532 | ID=cds.MS.gene05216.t1;Parent=MS.gene05216.t1 |
| Gene Sequence |
| Protein sequence |
