Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017121.t1 | XP_003617439.2 | 96 | 683 | 25 | 2 | 1 | 682 | 1 | 682 | 0.00E+00 | 1294.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017121.t1 | Q9SHY2 | 77.0 | 665 | 149 | 3 | 19 | 680 | 22 | 685 | 1.6e-304 | 1046.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017121.t1 | G7KD70 | 96.0 | 683 | 25 | 2 | 1 | 682 | 1 | 682 | 0.0e+00 | 1294.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene37726 | MS.gene017121 | PPI |
| MS.gene05216 | MS.gene017121 | PPI |
| MS.gene017121 | MS.gene57831 | PPI |
| MS.gene45566 | MS.gene017121 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017121.t1 | MTR_5g091600 | 96.047 | 683 | 25 | 2 | 1 | 682 | 1 | 682 | 0.0 | 1323 |
| MS.gene017121.t1 | MTR_3g063490 | 86.187 | 695 | 82 | 3 | 1 | 681 | 1 | 695 | 0.0 | 1190 |
| MS.gene017121.t1 | MTR_3g063520 | 87.826 | 690 | 76 | 2 | 1 | 682 | 1 | 690 | 0.0 | 1167 |
| MS.gene017121.t1 | MTR_6g077870 | 71.659 | 681 | 183 | 5 | 6 | 680 | 34 | 710 | 0.0 | 999 |
| MS.gene017121.t1 | MTR_6g077870 | 71.609 | 553 | 150 | 4 | 131 | 680 | 1 | 549 | 0.0 | 818 |
| MS.gene017121.t1 | MTR_7g028250 | 57.951 | 654 | 264 | 6 | 27 | 673 | 30 | 679 | 0.0 | 784 |
| MS.gene017121.t1 | MTR_3g092090 | 55.338 | 665 | 286 | 5 | 6 | 667 | 7 | 663 | 0.0 | 766 |
| MS.gene017121.t1 | MTR_3g092090 | 55.199 | 654 | 282 | 5 | 6 | 656 | 7 | 652 | 0.0 | 749 |
| MS.gene017121.t1 | MTR_1g007580 | 51.940 | 670 | 307 | 4 | 4 | 670 | 15 | 672 | 0.0 | 730 |
| MS.gene017121.t1 | MTR_0312s0020 | 51.560 | 673 | 319 | 3 | 1 | 670 | 4 | 672 | 0.0 | 729 |
| MS.gene017121.t1 | MTR_1g007540 | 51.560 | 673 | 319 | 3 | 1 | 670 | 4 | 672 | 0.0 | 729 |
| MS.gene017121.t1 | MTR_1g077840 | 51.502 | 666 | 311 | 6 | 8 | 669 | 22 | 679 | 0.0 | 715 |
| MS.gene017121.t1 | MTR_5g091615 | 92.453 | 159 | 12 | 0 | 519 | 677 | 59 | 217 | 2.07e-92 | 289 |
| MS.gene017121.t1 | MTR_5g091615 | 75.862 | 58 | 13 | 1 | 1 | 58 | 1 | 57 | 2.93e-19 | 89.4 |
| MS.gene017121.t1 | MTR_1626s0010 | 51.681 | 238 | 112 | 1 | 210 | 447 | 1 | 235 | 2.29e-82 | 260 |
| MS.gene017121.t1 | MTR_0312s0050 | 49.558 | 113 | 49 | 1 | 8 | 120 | 19 | 123 | 6.73e-33 | 123 |
| MS.gene017121.t1 | MTR_2g083230 | 86.957 | 46 | 6 | 0 | 122 | 167 | 34 | 79 | 2.68e-18 | 80.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017121.t1 | AT1G65730 | 75.145 | 688 | 162 | 5 | 1 | 681 | 1 | 686 | 0.0 | 1065 |
| MS.gene017121.t1 | AT3G17650 | 72.156 | 668 | 176 | 4 | 22 | 681 | 46 | 711 | 0.0 | 967 |
| MS.gene017121.t1 | AT3G17650 | 72.156 | 668 | 176 | 4 | 22 | 681 | 46 | 711 | 0.0 | 967 |
| MS.gene017121.t1 | AT1G48370 | 71.450 | 669 | 180 | 4 | 22 | 681 | 55 | 721 | 0.0 | 954 |
| MS.gene017121.t1 | AT3G27020 | 57.227 | 678 | 269 | 7 | 9 | 673 | 7 | 676 | 0.0 | 784 |
| MS.gene017121.t1 | AT1G48370 | 70.000 | 560 | 157 | 4 | 131 | 681 | 1 | 558 | 0.0 | 777 |
| MS.gene017121.t1 | AT5G53550 | 55.852 | 675 | 282 | 6 | 1 | 668 | 4 | 669 | 0.0 | 763 |
| MS.gene017121.t1 | AT5G53550 | 55.852 | 675 | 282 | 6 | 1 | 668 | 4 | 669 | 0.0 | 763 |
| MS.gene017121.t1 | AT5G53550 | 55.852 | 675 | 282 | 6 | 1 | 668 | 4 | 669 | 0.0 | 763 |
| MS.gene017121.t1 | AT5G53550 | 55.852 | 675 | 282 | 6 | 1 | 668 | 4 | 669 | 0.0 | 763 |
| MS.gene017121.t1 | AT5G53550 | 55.852 | 675 | 282 | 6 | 1 | 668 | 4 | 669 | 0.0 | 763 |
| MS.gene017121.t1 | AT5G41000 | 54.776 | 670 | 293 | 6 | 4 | 667 | 2 | 667 | 0.0 | 754 |
| MS.gene017121.t1 | AT5G24380 | 53.303 | 666 | 299 | 5 | 6 | 667 | 3 | 660 | 0.0 | 748 |
| MS.gene017121.t1 | AT4G24120 | 53.254 | 676 | 297 | 5 | 1 | 669 | 9 | 672 | 0.0 | 739 |
| MS.gene017121.t1 | AT5G41000 | 53.064 | 669 | 281 | 7 | 4 | 667 | 2 | 642 | 0.0 | 714 |
| MS.gene017121.t1 | AT5G53550 | 58.480 | 513 | 207 | 2 | 156 | 668 | 1 | 507 | 0.0 | 615 |
| MS.gene017121.t1 | AT5G41000 | 55.285 | 492 | 217 | 3 | 178 | 667 | 1 | 491 | 0.0 | 578 |
| MS.gene017121.t1 | AT5G45450 | 65.753 | 219 | 69 | 1 | 463 | 681 | 1 | 213 | 9.40e-97 | 297 |
Find 153 sgRNAs with CRISPR-Local
Find 271 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATTTGTTGTTAGCTTTCT+TGG | 0.055871 | 5.1:-73191635 | MS.gene017121:CDS |
| GTTCTTTGCATAACTCTTAA+AGG | 0.161384 | 5.1:-73190204 | MS.gene017121:CDS |
| GGTGATGGTCTATTCAATTT+TGG | 0.178911 | 5.1:-73190231 | MS.gene017121:CDS |
| GATGAGATTTCCACTGAAAA+AGG | 0.208952 | 5.1:-73193414 | MS.gene017121:CDS |
| AATGTTTCGGCTGGGTTGTT+AGG | 0.215147 | 5.1:-73193255 | MS.gene017121:CDS |
| TGATTTGCGGAGATGGAATT+TGG | 0.227884 | 5.1:-73189291 | MS.gene017121:CDS |
| GAAGCTTGATATTGTTTATT+TGG | 0.238786 | 5.1:-73189369 | MS.gene017121:CDS |
| TACATGGTCTTCAAGGTTAC+AGG | 0.266757 | 5.1:-73190560 | MS.gene017121:CDS |
| ATGTTTGTGAGCCAAGTTAT+TGG | 0.272519 | 5.1:-73189712 | MS.gene017121:CDS |
| TTTGGAGCAGCTGTTGCTTC+TGG | 0.279659 | 5.1:-73189316 | MS.gene017121:CDS |
| TACTTGCTTCTTTGCTAGTT+TGG | 0.284398 | 5.1:+73191115 | None:intergenic |
| CCGAACAATATTAATAATTA+TGG | 0.291212 | 5.1:+73189492 | None:intergenic |
| TATTCCTTCTTTGAATGTTT+CGG | 0.296053 | 5.1:-73193268 | MS.gene017121:CDS |
| AGCGAAATATTGGTTATATA+TGG | 0.303147 | 5.1:+73190678 | None:intergenic |
| TCATTGGCAGTGCCAGCTTC+TGG | 0.308809 | 5.1:+73191695 | None:intergenic |
| GACACCACATGCTGCTAAAC+TGG | 0.314803 | 5.1:+73189816 | None:intergenic |
| ACCAATCAACAGCGAAATAT+TGG | 0.316315 | 5.1:+73190668 | None:intergenic |
| TTTACAAACTTTCCCACATT+TGG | 0.322898 | 5.1:-73191011 | MS.gene017121:CDS |
| GTATTCTCCTGTCTGGTAAA+AGG | 0.329015 | 5.1:+73193174 | None:intergenic |
| TTATTTGGCAGAAGCTTGAT+AGG | 0.342034 | 5.1:-73189354 | MS.gene017121:CDS |
| ACCAATATTTCGCTGTTGAT+TGG | 0.354272 | 5.1:-73190669 | MS.gene017121:CDS |
| AAGTAGCTTCCAATGTAAAA+TGG | 0.358086 | 5.1:+73189412 | None:intergenic |
| TCACGTCGTCGATGAGGTTC+TGG | 0.358748 | 5.1:+73193462 | None:intergenic |
| ATAGGCATAGCAATGATTCT+TGG | 0.363000 | 5.1:-73190252 | MS.gene017121:CDS |
| TGGTTATTCTACCATGCATT+TGG | 0.366728 | 5.1:-73189652 | MS.gene017121:CDS |
| CTTCTCCTTTAGCTTCTTGT+GGG | 0.366991 | 5.1:-73191075 | MS.gene017121:CDS |
| AGGGCCAAGGCTGATGCATT+TGG | 0.370325 | 5.1:-73189334 | MS.gene017121:CDS |
| GGGTTTGGTAGCTACTTGTT+TGG | 0.371080 | 5.1:-73191746 | MS.gene017121:CDS |
| GGCAGAAACAGGTTACTGTT+AGG | 0.378300 | 5.1:-73193365 | MS.gene017121:CDS |
| CCTTCTTTGAATGTTTCGGC+TGG | 0.378910 | 5.1:-73193264 | MS.gene017121:CDS |
| TGATTGGTGGAGTTCTTTCA+TGG | 0.381134 | 5.1:-73190653 | MS.gene017121:CDS |
| TACCATGCATTTGGTACTCT+TGG | 0.383561 | 5.1:-73189643 | MS.gene017121:CDS |
| AAGGAAAATCGGTTCCTTCA+TGG | 0.390439 | 5.1:-73193386 | MS.gene017121:CDS |
| TGGCTCACAAACATGGATTT+CGG | 0.390640 | 5.1:+73189721 | None:intergenic |
| GCCAATGATGTTAAGAGTCT+TGG | 0.398551 | 5.1:-73191680 | MS.gene017121:CDS |
| CTGCTTTCTTTGAGATCAGC+AGG | 0.407509 | 5.1:+73190585 | None:intergenic |
| TCTTGTGGGGTTTCTTCCAA+TGG | 0.410444 | 5.1:-73191061 | MS.gene017121:CDS |
| TTCAGTGGTTCCACTTAGAA+AGG | 0.412142 | 5.1:-73191606 | MS.gene017121:intron |
| GATGTTAAGAGTCTTGGTTT+AGG | 0.418370 | 5.1:-73191674 | MS.gene017121:CDS |
| GGTTCCTTCATGGCAGAAAC+AGG | 0.418491 | 5.1:-73193376 | MS.gene017121:CDS |
| GATTGGTGGAGTTCTTTCAT+GGG | 0.427764 | 5.1:-73190652 | MS.gene017121:CDS |
| GACAAGAATTTCATGCAAAT+AGG | 0.427809 | 5.1:+73189226 | None:intergenic |
| AGTCACTTACTTCCTTTGAT+AGG | 0.427904 | 5.1:+73190980 | None:intergenic |
| CCATAATTATTAATATTGTT+CGG | 0.429626 | 5.1:-73189492 | MS.gene017121:CDS |
| GTAGGTGGGAGAGGAGCATT+TGG | 0.431255 | 5.1:+73190132 | None:intergenic |
| GTTGCTTCTGGTTTGATTTG+CGG | 0.432992 | 5.1:-73189304 | MS.gene017121:CDS |
| GCAGCTAATGCTAAGGTTGA+TGG | 0.437579 | 5.1:-73189199 | MS.gene017121:CDS |
| TTTACTTGTGTAGGTGGGTT+TGG | 0.439530 | 5.1:-73191761 | MS.gene017121:intron |
| TCTTCTCCTTTAGCTTCTTG+TGG | 0.441527 | 5.1:-73191076 | MS.gene017121:CDS |
| AAAAGGGTTTGAAGGAAAAT+CGG | 0.442446 | 5.1:-73193397 | MS.gene017121:CDS |
| ATGTTTCGGCTGGGTTGTTA+GGG | 0.444080 | 5.1:-73193254 | MS.gene017121:CDS |
| ACCAAGACTCTTAACATCAT+TGG | 0.446254 | 5.1:+73191679 | None:intergenic |
| CGATAGCAGTTCCAATAACT+TGG | 0.447827 | 5.1:+73189701 | None:intergenic |
| TTCACTGCTGGTGATGCTTG+TGG | 0.449951 | 5.1:-73191035 | MS.gene017121:CDS |
| CTCATGCAAGACTTCAAAAC+AGG | 0.450675 | 5.1:-73189763 | MS.gene017121:CDS |
| TGCTCCAAATGCATCAGCCT+TGG | 0.453111 | 5.1:+73189330 | None:intergenic |
| TATCGAAACATGGCAATACT+AGG | 0.453894 | 5.1:-73189580 | MS.gene017121:CDS |
| TTCACTATCGGTGCTTGGAC+AGG | 0.455104 | 5.1:-73189859 | MS.gene017121:CDS |
| GGTGTCATGTGGCCTCTCAT+TGG | 0.456041 | 5.1:-73190630 | MS.gene017121:CDS |
| TTAAGAGTCTTGGTTTAGGA+TGG | 0.456468 | 5.1:-73191670 | MS.gene017121:CDS |
| TCTGGTTTGATTTGCGGAGA+TGG | 0.456514 | 5.1:-73189298 | MS.gene017121:CDS |
| CAAGTATATTCCTGTTCCTA+TGG | 0.457463 | 5.1:-73189446 | MS.gene017121:CDS |
| CTCAAAGAAAGCAGCTTACA+TGG | 0.464152 | 5.1:-73190576 | MS.gene017121:CDS |
| AGCAGCTTACATGGTCTTCA+AGG | 0.465668 | 5.1:-73190567 | MS.gene017121:CDS |
| TTTGGTACTCTTGGTCAACC+TGG | 0.466335 | 5.1:-73189634 | MS.gene017121:CDS |
| ACCAGCTTTCTCAAGCAACT+TGG | 0.467323 | 5.1:+73193209 | None:intergenic |
| AGGAGGGGATTTGATCTTTG+AGG | 0.467620 | 5.1:+73190073 | None:intergenic |
| CAAGTTATTGGAACTGCTAT+CGG | 0.474537 | 5.1:-73189700 | MS.gene017121:CDS |
| ATGAAGCTGAATCTCACTAC+TGG | 0.474985 | 5.1:-73193294 | MS.gene017121:CDS |
| ATCGCCATAGCCATAGGAAC+AGG | 0.477409 | 5.1:+73189436 | None:intergenic |
| TTTCGATAAACGAGTGCATA+AGG | 0.482550 | 5.1:+73189595 | None:intergenic |
| AATAACAGTATTCTCCTGTC+TGG | 0.483024 | 5.1:+73193167 | None:intergenic |
| CCATCTTCACTATCGGTGCT+TGG | 0.483234 | 5.1:-73189864 | MS.gene017121:CDS |
| CTTCTTTGAATGTTTCGGCT+GGG | 0.483708 | 5.1:-73193263 | MS.gene017121:CDS |
| CCCTCCTGGTTTGCTATCGC+AGG | 0.488906 | 5.1:-73190057 | MS.gene017121:CDS |
| ACTTGTGTTGTTGCTGCTAG+TGG | 0.489925 | 5.1:-73193141 | MS.gene017121:CDS |
| AGTTAGTGTACCTTTCTAAG+TGG | 0.497051 | 5.1:+73191596 | None:intergenic |
| AATATTGTTCGGTACTTCGT+TGG | 0.499440 | 5.1:-73189481 | MS.gene017121:CDS |
| GCAGAAACAGGTTACTGTTA+GGG | 0.499595 | 5.1:-73193364 | MS.gene017121:CDS |
| AATATTTCGCTGTTGATTGG+TGG | 0.504823 | 5.1:-73190666 | MS.gene017121:CDS |
| TAAACGAGTGCATAAGGTGC+AGG | 0.507587 | 5.1:+73189601 | None:intergenic |
| TTTGCTATTGATATGTGTGT+TGG | 0.507636 | 5.1:-73189391 | MS.gene017121:CDS |
| TTCTTTCATGGGGTGTCATG+TGG | 0.512338 | 5.1:-73190641 | MS.gene017121:CDS |
| ACTTTAGCTGGTGGAAAATG+TGG | 0.515525 | 5.1:+73189995 | None:intergenic |
| TCAAAGATCAAATCCCCTCC+TGG | 0.519522 | 5.1:-73190071 | MS.gene017121:CDS |
| CATAGGAACAGGAATATACT+TGG | 0.521944 | 5.1:+73189447 | None:intergenic |
| ATAGCCTGCGATAGCAAACC+AGG | 0.526898 | 5.1:+73190053 | None:intergenic |
| GCAAAACAAATTCCAGAAGC+TGG | 0.528010 | 5.1:-73191707 | MS.gene017121:CDS |
| AATAACTTGGCTCACAAACA+TGG | 0.530485 | 5.1:+73189714 | None:intergenic |
| ATAGGCTTCTAGACCAAATG+TGG | 0.534074 | 5.1:+73190998 | None:intergenic |
| AAAGAAGCAAGTAAAAGCAC+TGG | 0.538820 | 5.1:-73191105 | MS.gene017121:CDS |
| CCAAGCACCGATAGTGAAGA+TGG | 0.542033 | 5.1:+73189864 | None:intergenic |
| ATTCAGCTTCATCACAATGA+AGG | 0.542122 | 5.1:+73193305 | None:intergenic |
| AATGAAAGTGTAGGTGGGAG+AGG | 0.542352 | 5.1:+73190123 | None:intergenic |
| ACCAAGTTGCTTGAGAAAGC+TGG | 0.544740 | 5.1:-73193210 | MS.gene017121:CDS |
| TATTCCTGTTCCTATGGCTA+TGG | 0.547446 | 5.1:-73189440 | MS.gene017121:CDS |
| GTAACCTGTTTCTGCCATGA+AGG | 0.548353 | 5.1:+73193372 | None:intergenic |
| TGATGTGATACCACTTTAGC+TGG | 0.550885 | 5.1:+73189983 | None:intergenic |
| ATGGCTGTGGACTAACAGAT+TGG | 0.552312 | 5.1:-73189915 | MS.gene017121:CDS |
| GGTTCTTCTTTGTCAAGACA+TGG | 0.553064 | 5.1:-73193233 | MS.gene017121:CDS |
| CTTTAGCTGGTGGAAAATGT+GGG | 0.554313 | 5.1:+73189996 | None:intergenic |
| GAAACCCCACAAGAAGCTAA+AGG | 0.558484 | 5.1:+73191070 | None:intergenic |
| TGAGCTGTTGCAGTACCACT+TGG | 0.560291 | 5.1:+73191170 | None:intergenic |
| ATGGCAATACTAGGTGTGGA+TGG | 0.562386 | 5.1:-73189571 | MS.gene017121:CDS |
| TGGTCCCTTGCATCGACCTA+CGG | 0.564629 | 5.1:-73189895 | MS.gene017121:CDS |
| TATTTGGCAGAAGCTTGATA+GGG | 0.566643 | 5.1:-73189353 | MS.gene017121:CDS |
| AATCTCATCGAGTTGTTCAT+CGG | 0.567170 | 5.1:+73193428 | None:intergenic |
| AGACAAAGTAGCACAGTCTG+AGG | 0.568806 | 5.1:-73190157 | MS.gene017121:CDS |
| GTCTAGAGCAGCTAATGCTA+AGG | 0.570538 | 5.1:-73189206 | MS.gene017121:CDS |
| AATGGTATCGCCATAGCCAT+AGG | 0.572462 | 5.1:+73189430 | None:intergenic |
| AAATTAGCCATCTTCACTAT+CGG | 0.574958 | 5.1:-73189871 | MS.gene017121:CDS |
| GCAAGAGCAAGAAAAGAGCT+AGG | 0.577753 | 5.1:+73189262 | None:intergenic |
| CTCATCGAGTTGTTCATCGG+AGG | 0.577930 | 5.1:+73193431 | None:intergenic |
| GCAGAAGCTTGATAGGGCCA+AGG | 0.581499 | 5.1:-73189347 | MS.gene017121:CDS |
| TCATCGAATGAAAGTGTAGG+TGG | 0.582413 | 5.1:+73190117 | None:intergenic |
| ATCTGTTAGTCCACAGCCAT+AGG | 0.582868 | 5.1:+73189918 | None:intergenic |
| CAAAACAGGTTACATGACAC+TGG | 0.583625 | 5.1:-73189749 | MS.gene017121:CDS |
| TCAACGTCACGTCGTCGATG+AGG | 0.588481 | 5.1:+73193456 | None:intergenic |
| AAACATGGCAATACTAGGTG+TGG | 0.591588 | 5.1:-73189575 | MS.gene017121:CDS |
| AAGAATTTCATGCAAATAGG+TGG | 0.591699 | 5.1:+73189229 | None:intergenic |
| CCAGCCGAAACATTCAAAGA+AGG | 0.594215 | 5.1:+73193264 | None:intergenic |
| TGCACTCGTTTATCGAAACA+TGG | 0.595881 | 5.1:-73189590 | MS.gene017121:CDS |
| TTCTCCTTTAGCTTCTTGTG+GGG | 0.598215 | 5.1:-73191074 | MS.gene017121:CDS |
| ATAGCAATGATTCTTGGTGA+TGG | 0.599500 | 5.1:-73190246 | MS.gene017121:CDS |
| TGCTTTCTTTGAGATCAGCA+GGG | 0.603921 | 5.1:+73190586 | None:intergenic |
| ATTCGATGACAAGCGCAGAA+CGG | 0.605807 | 5.1:-73190103 | MS.gene017121:CDS |
| GGTGCAGGGTATGCTGAACC+AGG | 0.606714 | 5.1:+73189616 | None:intergenic |
| TTGGTCTAGAAGCCTATCAA+AGG | 0.609519 | 5.1:-73190992 | MS.gene017121:CDS |
| GACCAAGAGTACCAAATGCA+TGG | 0.613241 | 5.1:+73189641 | None:intergenic |
| ATTGGTGGAGTTCTTTCATG+GGG | 0.613889 | 5.1:-73190651 | MS.gene017121:CDS |
| AGTTGCTTGAGAAAGCTGGT+TGG | 0.620575 | 5.1:-73193206 | MS.gene017121:CDS |
| CACATGCTGCTAAACTGGCT+AGG | 0.627857 | 5.1:+73189821 | None:intergenic |
| TGAAGCTGAATCTCACTACT+GGG | 0.630097 | 5.1:-73193293 | MS.gene017121:CDS |
| CTGCGATAGCAAACCAGGAG+GGG | 0.633433 | 5.1:+73190058 | None:intergenic |
| GGTGCTTGGACAGGAGCCAA+CGG | 0.634839 | 5.1:-73189850 | MS.gene017121:CDS |
| ACATGGTCTTCAAGGTTACA+GGG | 0.635841 | 5.1:-73190559 | MS.gene017121:intron |
| AAGAAGCAAGTAAAAGCACT+GGG | 0.641434 | 5.1:-73191104 | MS.gene017121:CDS |
| TTTAGCTGGTGGAAAATGTG+GGG | 0.643964 | 5.1:+73189997 | None:intergenic |
| AAACGAGTGCATAAGGTGCA+GGG | 0.645258 | 5.1:+73189602 | None:intergenic |
| TTGTCATCGAATGAAAGTGT+AGG | 0.645823 | 5.1:+73190114 | None:intergenic |
| CATCGAATGAAAGTGTAGGT+GGG | 0.652819 | 5.1:+73190118 | None:intergenic |
| CCTGCGATAGCAAACCAGGA+GGG | 0.658243 | 5.1:+73190057 | None:intergenic |
| AAAATATGCTGCAAAGTACG+AGG | 0.669730 | 5.1:+73189524 | None:intergenic |
| CTAGCCAGTTTAGCAGCATG+TGG | 0.673936 | 5.1:-73189820 | MS.gene017121:CDS |
| TAGGCTTCTAGACCAAATGT+GGG | 0.679352 | 5.1:+73190999 | None:intergenic |
| TTAGCTGGTGGAAAATGTGG+GGG | 0.686845 | 5.1:+73189998 | None:intergenic |
| ACTGGCTAGGATACCGCCGT+TGG | 0.687737 | 5.1:+73189834 | None:intergenic |
| TAGAATAACCAGAAAACACA+AGG | 0.690587 | 5.1:+73189664 | None:intergenic |
| TGTGATACCACTTTAGCTGG+TGG | 0.692393 | 5.1:+73189986 | None:intergenic |
| TTCAGATTGACATATCCAAG+TGG | 0.693932 | 5.1:-73191185 | MS.gene017121:CDS |
| GCTAGTGGAATTGCATTCAG+CGG | 0.695424 | 5.1:-73193126 | MS.gene017121:intron |
| GCCTGCGATAGCAAACCAGG+AGG | 0.703548 | 5.1:+73190056 | None:intergenic |
| GCTTGGACAGGAGCCAACGG+CGG | 0.709931 | 5.1:-73189847 | MS.gene017121:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAATTCAAATAAATAAAA+AGG | + | chr5.1:73191186-73191205 | None:intergenic | 10.0% |
| !! | TAAATGTTAAATAAATGAAA+AGG | + | chr5.1:73191881-73191900 | None:intergenic | 10.0% |
| !!! | TATTTATTTGAATTTTGTAT+TGG | - | chr5.1:73191189-73191208 | MS.gene017121:CDS | 10.0% |
| !! | ATTAAAAAAGGATTTAACAA+AGG | - | chr5.1:73191718-73191737 | MS.gene017121:CDS | 15.0% |
| !! | CCATAATTATTAATATTGTT+CGG | - | chr5.1:73193159-73193178 | MS.gene017121:CDS | 15.0% |
| !! | TATTTATTTATGTACATAAC+AGG | - | chr5.1:73191902-73191921 | MS.gene017121:intron | 15.0% |
| !! | TTCCATCATTAATAAAATAT+AGG | + | chr5.1:73191699-73191718 | None:intergenic | 15.0% |
| !! | TTTAACACAAAACATAAAAA+GGG | + | chr5.1:73189571-73189590 | None:intergenic | 15.0% |
| !!! | AGTATATTTTGAAATTGATA+TGG | - | chr5.1:73192200-73192219 | MS.gene017121:intron | 15.0% |
| !!! | ATTAATGATGGAATTAAAAA+AGG | - | chr5.1:73191706-73191725 | MS.gene017121:CDS | 15.0% |
| !!! | TGAATCAATTTTTAAAACAT+GGG | - | chr5.1:73191390-73191409 | MS.gene017121:intron | 15.0% |
| !!! | TTGAATCAATTTTTAAAACA+TGG | - | chr5.1:73191389-73191408 | MS.gene017121:intron | 15.0% |
| !! | ATTAGAAATTTAAACATGAC+AGG | - | chr5.1:73190547-73190566 | MS.gene017121:intron | 20.0% |
| !! | ATTTGTGATTTGAATTGAAT+TGG | - | chr5.1:73189610-73189629 | MS.gene017121:CDS | 20.0% |
| !! | CCGAACAATATTAATAATTA+TGG | + | chr5.1:73193162-73193181 | None:intergenic | 20.0% |
| !! | CTTTAACACAAAACATAAAA+AGG | + | chr5.1:73189572-73189591 | None:intergenic | 20.0% |
| !! | TCAAAATATACTTACAAAAG+TGG | + | chr5.1:73192192-73192211 | None:intergenic | 20.0% |
| !! | TTTGTGATTTGAATTGAATT+GGG | - | chr5.1:73189611-73189630 | MS.gene017121:CDS | 20.0% |
| !!! | ATTGTATTCTTTTAAACTAC+AGG | - | chr5.1:73192371-73192390 | MS.gene017121:intron | 20.0% |
| !!! | ATTTTAAAAATTGAGTCAGA+TGG | - | chr5.1:73191255-73191274 | MS.gene017121:intron | 20.0% |
| !!! | TAATCAAACAATGTATTGAT+AGG | - | chr5.1:73191090-73191109 | MS.gene017121:CDS | 20.0% |
| ! | CAACGTAAAACATAGTTAAT+TGG | - | chr5.1:73192249-73192268 | MS.gene017121:intron | 25.0% |
| ! | GAAAAATAGTAGTTTCTCAT+TGG | - | chr5.1:73192222-73192241 | MS.gene017121:intron | 25.0% |
| ! | GAAGCTTGATATTGTTTATT+TGG | - | chr5.1:73193282-73193301 | MS.gene017121:CDS | 25.0% |
| ! | GATTATGATAGCTTAAGAAA+AGG | + | chr5.1:73190513-73190532 | None:intergenic | 25.0% |
| ! | TAAAACAATTGAACATGACT+TGG | - | chr5.1:73191348-73191367 | MS.gene017121:intron | 25.0% |
| ! | TATCAATAGATCTTAACTGA+AGG | - | chr5.1:73190468-73190487 | MS.gene017121:intron | 25.0% |
| ! | TATTCCTTCTTTGAATGTTT+CGG | - | chr5.1:73189383-73189402 | MS.gene017121:CDS | 25.0% |
| ! | TTAGGAGTCAACTTATTTAA+AGG | - | chr5.1:73189847-73189866 | MS.gene017121:CDS | 25.0% |
| ! | TTGTGATTTGAATTGAATTG+GGG | - | chr5.1:73189612-73189631 | MS.gene017121:CDS | 25.0% |
| !! | AGCGAAATATTGGTTATATA+TGG | + | chr5.1:73191976-73191995 | None:intergenic | 25.0% |
| !! | CGCCTATATTTTATTAATGA+TGG | - | chr5.1:73191694-73191713 | MS.gene017121:CDS | 25.0% |
| !! | TTTAAACTACAGGTTTTCAT+AGG | - | chr5.1:73192381-73192400 | MS.gene017121:intron | 25.0% |
| !!! | AAAATCTTGTGTTTTTGTGT+TGG | - | chr5.1:73189758-73189777 | MS.gene017121:CDS | 25.0% |
| !!! | AGTTAATTTTGAAGCATGAT+TGG | - | chr5.1:73189873-73189892 | MS.gene017121:CDS | 25.0% |
| !!! | ATTTTAAGGTATGACAAAGT+CGG | + | chr5.1:73191137-73191156 | None:intergenic | 25.0% |
| !!! | TGTTTTAAATTGATTGAACC+AGG | + | chr5.1:73191335-73191354 | None:intergenic | 25.0% |
| AAAAGGGTTTGAAGGAAAAT+CGG | - | chr5.1:73189254-73189273 | MS.gene017121:CDS | 30.0% | |
| AAATTAGCCATCTTCACTAT+CGG | - | chr5.1:73192780-73192799 | MS.gene017121:intron | 30.0% | |
| AACCTCTATGTTCTCAATTA+TGG | - | chr5.1:73191782-73191801 | MS.gene017121:intron | 30.0% | |
| AAGAATTTCATGCAAATAGG+TGG | + | chr5.1:73193425-73193444 | None:intergenic | 30.0% | |
| AAGTAGCTTCCAATGTAAAA+TGG | + | chr5.1:73193242-73193261 | None:intergenic | 30.0% | |
| AATTGAGAACATAGAGGTTT+CGG | + | chr5.1:73191781-73191800 | None:intergenic | 30.0% | |
| ACAAGTACAAAACTGGAATT+TGG | - | chr5.1:73192278-73192297 | MS.gene017121:intron | 30.0% | |
| AGCAAAACATTTCTCAAGAA+GGG | + | chr5.1:73190661-73190680 | None:intergenic | 30.0% | |
| ATGAGATTTCCACTGAAAAA+GGG | - | chr5.1:73189238-73189257 | MS.gene017121:CDS | 30.0% | |
| CAGAGTTCAATTAGAAATTG+AGG | + | chr5.1:73190785-73190804 | None:intergenic | 30.0% | |
| GACAAGAATTTCATGCAAAT+AGG | + | chr5.1:73193428-73193447 | None:intergenic | 30.0% | |
| GATTGAAACAAGTACAAAAC+TGG | - | chr5.1:73192271-73192290 | MS.gene017121:intron | 30.0% | |
| GATTTAACAAAGGATGCATT+TGG | - | chr5.1:73191728-73191747 | MS.gene017121:CDS | 30.0% | |
| GCAATTACTTCAATTCAATG+TGG | - | chr5.1:73190737-73190756 | MS.gene017121:intron | 30.0% | |
| GTTAGTAATACGATAGAGTT+TGG | - | chr5.1:73190595-73190614 | MS.gene017121:CDS | 30.0% | |
| GTTCTTTGCATAACTCTTAA+AGG | - | chr5.1:73192447-73192466 | MS.gene017121:intron | 30.0% | |
| TAGAATAACCAGAAAACACA+AGG | + | chr5.1:73192990-73193009 | None:intergenic | 30.0% | |
| TAGCAAAACATTTCTCAAGA+AGG | + | chr5.1:73190662-73190681 | None:intergenic | 30.0% | |
| TTTACAAACTTTCCCACATT+TGG | - | chr5.1:73191640-73191659 | MS.gene017121:CDS | 30.0% | |
| TTTCTAATTGAACTCTGAGT+TGG | - | chr5.1:73190788-73190807 | MS.gene017121:intron | 30.0% | |
| TTTCTTGGTTAGTGTATCAT+CGG | - | chr5.1:73189708-73189727 | MS.gene017121:CDS | 30.0% | |
| ! | AACAGTTTTCATACATCAGA+AGG | - | chr5.1:73191511-73191530 | MS.gene017121:intron | 30.0% |
| !! | CTATTTGTTGTTAGCTTTCT+TGG | - | chr5.1:73191016-73191035 | MS.gene017121:CDS | 30.0% |
| !! | TGGTTGGTAATGTATTCTTT+AGG | - | chr5.1:73192338-73192357 | MS.gene017121:intron | 30.0% |
| !! | TTTGCTATTGATATGTGTGT+TGG | - | chr5.1:73193260-73193279 | MS.gene017121:CDS | 30.0% |
| !!! | GGAATTTGTTTTGCAATAGT+TGG | + | chr5.1:73190938-73190957 | None:intergenic | 30.0% |
| AAAAAGGCCCATATTTGTAG+TGG | + | chr5.1:73191170-73191189 | None:intergenic | 35.0% | |
| AAAATATGCTGCAAAGTACG+AGG | + | chr5.1:73193130-73193149 | None:intergenic | 35.0% | |
| AAAATTATGAAAGTCCGCTG+AGG | + | chr5.1:73190711-73190730 | None:intergenic | 35.0% | |
| AATAACAGTATTCTCCTGTC+TGG | + | chr5.1:73189487-73189506 | None:intergenic | 35.0% | |
| AATAACTTGGCTCACAAACA+TGG | + | chr5.1:73192940-73192959 | None:intergenic | 35.0% | |
| AATCAAACTGTAGACATTGC+TGG | + | chr5.1:73191302-73191321 | None:intergenic | 35.0% | |
| AATTCAATGTGGATTCTCAG+TGG | - | chr5.1:73190748-73190767 | MS.gene017121:intron | 35.0% | |
| ACCAAGACTCTTAACATCAT+TGG | + | chr5.1:73190975-73190994 | None:intergenic | 35.0% | |
| ACCAATATTTCGCTGTTGAT+TGG | - | chr5.1:73191982-73192001 | MS.gene017121:intron | 35.0% | |
| ACCAATCAACAGCGAAATAT+TGG | + | chr5.1:73191986-73192005 | None:intergenic | 35.0% | |
| AGTCACTTACTTCCTTTGAT+AGG | + | chr5.1:73191674-73191693 | None:intergenic | 35.0% | |
| AGTTAGTGTACCTTTCTAAG+TGG | + | chr5.1:73191058-73191077 | None:intergenic | 35.0% | |
| ATAGCAATGATTCTTGGTGA+TGG | - | chr5.1:73192405-73192424 | MS.gene017121:intron | 35.0% | |
| ATAGGCATAGCAATGATTCT+TGG | - | chr5.1:73192399-73192418 | MS.gene017121:intron | 35.0% | |
| ATGTTTGTGAGCCAAGTTAT+TGG | - | chr5.1:73192939-73192958 | MS.gene017121:intron | 35.0% | |
| ATTCAGCTTCATCACAATGA+AGG | + | chr5.1:73189349-73189368 | None:intergenic | 35.0% | |
| CAAGTATATTCCTGTTCCTA+TGG | - | chr5.1:73193205-73193224 | MS.gene017121:CDS | 35.0% | |
| CAAGTTATTGGAACTGCTAT+CGG | - | chr5.1:73192951-73192970 | MS.gene017121:intron | 35.0% | |
| CAATGTCTACAGTTTGATTG+CGG | - | chr5.1:73191303-73191322 | MS.gene017121:intron | 35.0% | |
| CACCATAATTGAGAACATAG+AGG | + | chr5.1:73191787-73191806 | None:intergenic | 35.0% | |
| CATAGGAACAGGAATATACT+TGG | + | chr5.1:73193207-73193226 | None:intergenic | 35.0% | |
| GATGAGATTTCCACTGAAAA+AGG | - | chr5.1:73189237-73189256 | MS.gene017121:CDS | 35.0% | |
| GATGTTAAGAGTCTTGGTTT+AGG | - | chr5.1:73190977-73190996 | MS.gene017121:intron | 35.0% | |
| TACTTGCTTCTTTGCTAGTT+TGG | + | chr5.1:73191539-73191558 | None:intergenic | 35.0% | |
| TATCGAAACATGGCAATACT+AGG | - | chr5.1:73193071-73193090 | MS.gene017121:intron | 35.0% | |
| TATTTGGCAGAAGCTTGATA+GGG | - | chr5.1:73193298-73193317 | MS.gene017121:CDS | 35.0% | |
| TGAATTGAATTGGGGTTACT+GGG | - | chr5.1:73189620-73189639 | MS.gene017121:CDS | 35.0% | |
| TGGTTATTCTACCATGCATT+TGG | - | chr5.1:73192999-73193018 | MS.gene017121:intron | 35.0% | |
| TTAAGAGTCTTGGTTTAGGA+TGG | - | chr5.1:73190981-73191000 | MS.gene017121:intron | 35.0% | |
| TTATTTGGCAGAAGCTTGAT+AGG | - | chr5.1:73193297-73193316 | MS.gene017121:CDS | 35.0% | |
| TTCACATGGTTTACTTGTGT+AGG | - | chr5.1:73190881-73190900 | MS.gene017121:intron | 35.0% | |
| TTCAGATTGACATATCCAAG+TGG | - | chr5.1:73191466-73191485 | MS.gene017121:intron | 35.0% | |
| TTCTTGGTTAGTGTATCATC+GGG | - | chr5.1:73189709-73189728 | MS.gene017121:CDS | 35.0% | |
| TTGAATTGAATTGGGGTTAC+TGG | - | chr5.1:73189619-73189638 | MS.gene017121:CDS | 35.0% | |
| TTGCTGACAAATCTTTCACA+TGG | - | chr5.1:73190867-73190886 | MS.gene017121:intron | 35.0% | |
| TTTCGATAAACGAGTGCATA+AGG | + | chr5.1:73193059-73193078 | None:intergenic | 35.0% | |
| ! | AAAGAAGCAAGTAAAAGCAC+TGG | - | chr5.1:73191546-73191565 | MS.gene017121:intron | 35.0% |
| ! | AATATTTCGCTGTTGATTGG+TGG | - | chr5.1:73191985-73192004 | MS.gene017121:intron | 35.0% |
| ! | AATCTCATCGAGTTGTTCAT+CGG | + | chr5.1:73189226-73189245 | None:intergenic | 35.0% |
| ! | ATGGCGATACCATTTTACAT+TGG | - | chr5.1:73193230-73193249 | MS.gene017121:CDS | 35.0% |
| ! | ATTTTTCTGCTACCTATGTG+GGG | - | chr5.1:73191935-73191954 | MS.gene017121:intron | 35.0% |
| ! | GATTTTTCTGCTACCTATGT+GGG | - | chr5.1:73191934-73191953 | MS.gene017121:intron | 35.0% |
| ! | TAATCAACCTTTTACCAGAC+AGG | - | chr5.1:73189470-73189489 | MS.gene017121:CDS | 35.0% |
| ! | TGATTTTTCTGCTACCTATG+TGG | - | chr5.1:73191933-73191952 | MS.gene017121:intron | 35.0% |
| ! | TTGCTTTGCATGTGTTTTCT+TGG | - | chr5.1:73189693-73189712 | MS.gene017121:CDS | 35.0% |
| ! | TTGTCATCGAATGAAAGTGT+AGG | + | chr5.1:73192540-73192559 | None:intergenic | 35.0% |
| ! | TTTTCAACCAGCAACAGAAA+GGG | + | chr5.1:73189795-73189814 | None:intergenic | 35.0% |
| !! | AAGAAGCAAGTAAAAGCACT+GGG | - | chr5.1:73191547-73191566 | MS.gene017121:intron | 35.0% |
| !! | ATCTTGTGTTTTTGTGTTGG+TGG | - | chr5.1:73189761-73189780 | MS.gene017121:CDS | 35.0% |
| !! | GGTGATGGTCTATTCAATTT+TGG | - | chr5.1:73192420-73192439 | MS.gene017121:intron | 35.0% |
| !!! | GATATGGGTTTCTGGTTTTT+TGG | - | chr5.1:73189645-73189664 | MS.gene017121:CDS | 35.0% |
| !!! | TAGATCTTTTTCGATGTGAC+TGG | - | chr5.1:73192318-73192337 | MS.gene017121:intron | 35.0% |
| AAACATGGCAATACTAGGTG+TGG | - | chr5.1:73193076-73193095 | MS.gene017121:intron | 40.0% | |
| AACCTGCACCACTACAAATA+TGG | - | chr5.1:73191159-73191178 | MS.gene017121:CDS | 40.0% | |
| ACATGGTCTTCAAGGTTACA+GGG | - | chr5.1:73192092-73192111 | MS.gene017121:intron | 40.0% | |
| ACATGGTTTACTTGTGTAGG+TGG | - | chr5.1:73190884-73190903 | MS.gene017121:intron | 40.0% | |
| ACCTGCACCACTACAAATAT+GGG | - | chr5.1:73191160-73191179 | MS.gene017121:CDS | 40.0% | |
| ACTTTAGCTGGTGGAAAATG+TGG | + | chr5.1:73192659-73192678 | None:intergenic | 40.0% | |
| AGAAGGGTAAAAGAGCAAGT+TGG | + | chr5.1:73190645-73190664 | None:intergenic | 40.0% | |
| ATAGGCTTCTAGACCAAATG+TGG | + | chr5.1:73191656-73191675 | None:intergenic | 40.0% | |
| ATGAAGCTGAATCTCACTAC+TGG | - | chr5.1:73189357-73189376 | MS.gene017121:CDS | 40.0% | |
| ATTGGTGGAGTTCTTTCATG+GGG | - | chr5.1:73192000-73192019 | MS.gene017121:intron | 40.0% | |
| CAAAACAGGTTACATGACAC+TGG | - | chr5.1:73192902-73192921 | MS.gene017121:intron | 40.0% | |
| CATGGTTTACTTGTGTAGGT+GGG | - | chr5.1:73190885-73190904 | MS.gene017121:intron | 40.0% | |
| CGATAGCAGTTCCAATAACT+TGG | + | chr5.1:73192953-73192972 | None:intergenic | 40.0% | |
| CTCAAAGAAAGCAGCTTACA+TGG | - | chr5.1:73192075-73192094 | MS.gene017121:intron | 40.0% | |
| CTCATGCAAGACTTCAAAAC+AGG | - | chr5.1:73192888-73192907 | MS.gene017121:intron | 40.0% | |
| CTTCTTTGAATGTTTCGGCT+GGG | - | chr5.1:73189388-73189407 | MS.gene017121:CDS | 40.0% | |
| CTTTAGCTGGTGGAAAATGT+GGG | + | chr5.1:73192658-73192677 | None:intergenic | 40.0% | |
| GATTGGTGGAGTTCTTTCAT+GGG | - | chr5.1:73191999-73192018 | MS.gene017121:intron | 40.0% | |
| GCAAAACAAATTCCAGAAGC+TGG | - | chr5.1:73190944-73190963 | MS.gene017121:intron | 40.0% | |
| GCAGAAACAGGTTACTGTTA+GGG | - | chr5.1:73189287-73189306 | MS.gene017121:CDS | 40.0% | |
| GCCAATGATGTTAAGAGTCT+TGG | - | chr5.1:73190971-73190990 | MS.gene017121:intron | 40.0% | |
| GGTTCTTCTTTGTCAAGACA+TGG | - | chr5.1:73189418-73189437 | MS.gene017121:CDS | 40.0% | |
| GTATTCTCCTGTCTGGTAAA+AGG | + | chr5.1:73189480-73189499 | None:intergenic | 40.0% | |
| TACATGGTCTTCAAGGTTAC+AGG | - | chr5.1:73192091-73192110 | MS.gene017121:intron | 40.0% | |
| TACCATGCATTTGGTACTCT+TGG | - | chr5.1:73193008-73193027 | MS.gene017121:intron | 40.0% | |
| TAGGCTTCTAGACCAAATGT+GGG | + | chr5.1:73191655-73191674 | None:intergenic | 40.0% | |
| TATTCCTGTTCCTATGGCTA+TGG | - | chr5.1:73193211-73193230 | MS.gene017121:CDS | 40.0% | |
| TCCACTGAAAAAGGGTTTGA+AGG | - | chr5.1:73189246-73189265 | MS.gene017121:CDS | 40.0% | |
| TGAAGCTGAATCTCACTACT+GGG | - | chr5.1:73189358-73189377 | MS.gene017121:CDS | 40.0% | |
| TGATGTGATACCACTTTAGC+TGG | + | chr5.1:73192671-73192690 | None:intergenic | 40.0% | |
| TGATTCAAACATCAGCAGTG+AGG | + | chr5.1:73191377-73191396 | None:intergenic | 40.0% | |
| TGATTGGTGGAGTTCTTTCA+TGG | - | chr5.1:73191998-73192017 | MS.gene017121:intron | 40.0% | |
| TGCACTCGTTTATCGAAACA+TGG | - | chr5.1:73193061-73193080 | MS.gene017121:intron | 40.0% | |
| TGGCTCACAAACATGGATTT+CGG | + | chr5.1:73192933-73192952 | None:intergenic | 40.0% | |
| TTCAGTGGTTCCACTTAGAA+AGG | - | chr5.1:73191045-73191064 | MS.gene017121:CDS | 40.0% | |
| TTGGTCTAGAAGCCTATCAA+AGG | - | chr5.1:73191659-73191678 | MS.gene017121:CDS | 40.0% | |
| TTGTGACTCCTATTGACAGT+GGG | + | chr5.1:73189740-73189759 | None:intergenic | 40.0% | |
| TTTAGCTGGTGGAAAATGTG+GGG | + | chr5.1:73192657-73192676 | None:intergenic | 40.0% | |
| TTTGTGACTCCTATTGACAG+TGG | + | chr5.1:73189741-73189760 | None:intergenic | 40.0% | |
| ! | AAGGAAAATCGGTTCCTTCA+TGG | - | chr5.1:73189265-73189284 | MS.gene017121:CDS | 40.0% |
| ! | ACATTTTCCACCAGCTAAAG+TGG | - | chr5.1:73192658-73192677 | MS.gene017121:intron | 40.0% |
| ! | CAAAGTACGAGGCAGTTTTT+CGG | + | chr5.1:73193119-73193138 | None:intergenic | 40.0% |
| ! | CATCGAATGAAAGTGTAGGT+GGG | + | chr5.1:73192536-73192555 | None:intergenic | 40.0% |
| ! | CTTCTCCTTTAGCTTCTTGT+GGG | - | chr5.1:73191576-73191595 | MS.gene017121:intron | 40.0% |
| ! | CTTTCTTGGTCTCTTTTCAG+TGG | - | chr5.1:73191030-73191049 | MS.gene017121:CDS | 40.0% |
| ! | CTTTTCAACCAGCAACAGAA+AGG | + | chr5.1:73189796-73189815 | None:intergenic | 40.0% |
| ! | GAAGATGGCTAATTTTCCGT+AGG | + | chr5.1:73192775-73192794 | None:intergenic | 40.0% |
| ! | GTGGTGCAGGTTACATTTTA+AGG | + | chr5.1:73191151-73191170 | None:intergenic | 40.0% |
| ! | TCATCGAATGAAAGTGTAGG+TGG | + | chr5.1:73192537-73192556 | None:intergenic | 40.0% |
| ! | TCTTCTCCTTTAGCTTCTTG+TGG | - | chr5.1:73191575-73191594 | MS.gene017121:intron | 40.0% |
| ! | TGATTTGCGGAGATGGAATT+TGG | - | chr5.1:73193360-73193379 | MS.gene017121:CDS | 40.0% |
| ! | TTCCAATGGTTTTTCACTGC+TGG | - | chr5.1:73191604-73191623 | MS.gene017121:intron | 40.0% |
| ! | TTCTCCTTTAGCTTCTTGTG+GGG | - | chr5.1:73191577-73191596 | MS.gene017121:intron | 40.0% |
| ! | TTGTATCGCCTTGTGTTTTC+TGG | - | chr5.1:73192979-73192998 | MS.gene017121:intron | 40.0% |
| ! | TTTACTTGTGTAGGTGGGTT+TGG | - | chr5.1:73190890-73190909 | MS.gene017121:intron | 40.0% |
| ! | TTTTTCTGCTACCTATGTGG+GGG | - | chr5.1:73191936-73191955 | MS.gene017121:intron | 40.0% |
| !! | CCTCTCATTGGTGCTAAAAA+AGG | - | chr5.1:73192033-73192052 | MS.gene017121:intron | 40.0% |
| !! | CTAGCTTTTTGCAATGCCTA+TGG | - | chr5.1:73192717-73192736 | MS.gene017121:intron | 40.0% |
| !! | GTTGCTTCTGGTTTGATTTG+CGG | - | chr5.1:73193347-73193366 | MS.gene017121:CDS | 40.0% |
| !! | TGCTTTCTTTGAGATCAGCA+GGG | + | chr5.1:73192068-73192087 | None:intergenic | 40.0% |
| !! | TTGGTGCTAAAAAAGGAGAC+TGG | - | chr5.1:73192040-73192059 | MS.gene017121:intron | 40.0% |
| !!! | CCTTTTTTAGCACCAATGAG+AGG | + | chr5.1:73192036-73192055 | None:intergenic | 40.0% |
| !!! | TCCTTCAAACCCTTTTTCAG+TGG | + | chr5.1:73189250-73189269 | None:intergenic | 40.0% |
| !!! | TCTTTTTCGATGTGACTGGT+TGG | - | chr5.1:73192322-73192341 | MS.gene017121:intron | 40.0% |
| AAACGAGTGCATAAGGTGCA+GGG | + | chr5.1:73193052-73193071 | None:intergenic | 45.0% | |
| AATGGTATCGCCATAGCCAT+AGG | + | chr5.1:73193224-73193243 | None:intergenic | 45.0% | |
| AATGTTTCGGCTGGGTTGTT+AGG | - | chr5.1:73189396-73189415 | MS.gene017121:CDS | 45.0% | |
| ACCAAGTTGCTTGAGAAAGC+TGG | - | chr5.1:73189441-73189460 | MS.gene017121:CDS | 45.0% | |
| ACCAGCTTTCTCAAGCAACT+TGG | + | chr5.1:73189445-73189464 | None:intergenic | 45.0% | |
| AGACAAAGTAGCACAGTCTG+AGG | - | chr5.1:73192494-73192513 | MS.gene017121:intron | 45.0% | |
| AGCAGCTTACATGGTCTTCA+AGG | - | chr5.1:73192084-73192103 | MS.gene017121:intron | 45.0% | |
| AGGAGGGGATTTGATCTTTG+AGG | + | chr5.1:73192581-73192600 | None:intergenic | 45.0% | |
| AGTTGCTTGAGAAAGCTGGT+TGG | - | chr5.1:73189445-73189464 | MS.gene017121:CDS | 45.0% | |
| ATCTGTTAGTCCACAGCCAT+AGG | + | chr5.1:73192736-73192755 | None:intergenic | 45.0% | |
| ATGGCAATACTAGGTGTGGA+TGG | - | chr5.1:73193080-73193099 | MS.gene017121:intron | 45.0% | |
| ATGTTTCGGCTGGGTTGTTA+GGG | - | chr5.1:73189397-73189416 | MS.gene017121:CDS | 45.0% | |
| ATTCGATGACAAGCGCAGAA+CGG | - | chr5.1:73192548-73192567 | MS.gene017121:intron | 45.0% | |
| CACCAGCAGTGAAAAACCAT+TGG | + | chr5.1:73191609-73191628 | None:intergenic | 45.0% | |
| CCAGCCGAAACATTCAAAGA+AGG | + | chr5.1:73189390-73189409 | None:intergenic | 45.0% | |
| CCTTCTTTGAATGTTTCGGC+TGG | - | chr5.1:73189387-73189406 | MS.gene017121:CDS | 45.0% | |
| GAAACCCCACAAGAAGCTAA+AGG | + | chr5.1:73191584-73191603 | None:intergenic | 45.0% | |
| GCAAGAGCAAGAAAAGAGCT+AGG | + | chr5.1:73193392-73193411 | None:intergenic | 45.0% | |
| GCAGCTAATGCTAAGGTTGA+TGG | - | chr5.1:73193452-73193471 | MS.gene017121:CDS | 45.0% | |
| GCATTGCAAAAAGCTAGTGC+GGG | + | chr5.1:73192714-73192733 | None:intergenic | 45.0% | |
| GCTAGTGGAATTGCATTCAG+CGG | - | chr5.1:73189525-73189544 | MS.gene017121:CDS | 45.0% | |
| GGCAGAAACAGGTTACTGTT+AGG | - | chr5.1:73189286-73189305 | MS.gene017121:CDS | 45.0% | |
| GGCATTGCAAAAAGCTAGTG+CGG | + | chr5.1:73192715-73192734 | None:intergenic | 45.0% | |
| TAAACGAGTGCATAAGGTGC+AGG | + | chr5.1:73193053-73193072 | None:intergenic | 45.0% | |
| TCAAAGATCAAATCCCCTCC+TGG | - | chr5.1:73192580-73192599 | MS.gene017121:intron | 45.0% | |
| TCTTGTGGGGTTTCTTCCAA+TGG | - | chr5.1:73191590-73191609 | MS.gene017121:intron | 45.0% | |
| TGGATTCTCAGTGGAATGAG+TGG | - | chr5.1:73190757-73190776 | MS.gene017121:intron | 45.0% | |
| TGGTTAGTGTATCATCGGGT+GGG | - | chr5.1:73189713-73189732 | MS.gene017121:CDS | 45.0% | |
| TGTGATACCACTTTAGCTGG+TGG | + | chr5.1:73192668-73192687 | None:intergenic | 45.0% | |
| TTAGCTGGTGGAAAATGTGG+GGG | + | chr5.1:73192656-73192675 | None:intergenic | 45.0% | |
| TTGGTTAGTGTATCATCGGG+TGG | - | chr5.1:73189712-73189731 | MS.gene017121:CDS | 45.0% | |
| TTTGGTACTCTTGGTCAACC+TGG | - | chr5.1:73193017-73193036 | MS.gene017121:intron | 45.0% | |
| ! | AATGAAAGTGTAGGTGGGAG+AGG | + | chr5.1:73192531-73192550 | None:intergenic | 45.0% |
| ! | ACTTGTGTTGTTGCTGCTAG+TGG | - | chr5.1:73189510-73189529 | MS.gene017121:CDS | 45.0% |
| ! | AGCTCTTTTCTTGCTCTTGC+TGG | - | chr5.1:73193392-73193411 | MS.gene017121:CDS | 45.0% |
| ! | ATGGCTGTGGACTAACAGAT+TGG | - | chr5.1:73192736-73192755 | MS.gene017121:intron | 45.0% |
| ! | ATTTTCCGTAGGTCGATGCA+AGG | + | chr5.1:73192764-73192783 | None:intergenic | 45.0% |
| ! | GGGTTTGGTAGCTACTTGTT+TGG | - | chr5.1:73190905-73190924 | MS.gene017121:intron | 45.0% |
| ! | GTCTAGAGCAGCTAATGCTA+AGG | - | chr5.1:73193445-73193464 | MS.gene017121:CDS | 45.0% |
| ! | TTCTTTCATGGGGTGTCATG+TGG | - | chr5.1:73192010-73192029 | MS.gene017121:intron | 45.0% |
| ! | TTTTCCGTAGGTCGATGCAA+GGG | + | chr5.1:73192763-73192782 | None:intergenic | 45.0% |
| ! | TTTTGCAATGCCTATGGCTG+TGG | - | chr5.1:73192723-73192742 | MS.gene017121:intron | 45.0% |
| !! | ACTGGGTTGATATGGGTTTC+TGG | - | chr5.1:73189637-73189656 | MS.gene017121:CDS | 45.0% |
| !! | CTGCTTTCTTTGAGATCAGC+AGG | + | chr5.1:73192069-73192088 | None:intergenic | 45.0% |
| !! | GACCAAGAGTACCAAATGCA+TGG | + | chr5.1:73193013-73193032 | None:intergenic | 45.0% |
| !! | GTAACCTGTTTCTGCCATGA+AGG | + | chr5.1:73189282-73189301 | None:intergenic | 45.0% |
| !! | TCTGGTTTGATTTGCGGAGA+TGG | - | chr5.1:73193353-73193372 | MS.gene017121:CDS | 45.0% |
| !! | TGGGGTTACTGGGTTGATAT+GGG | - | chr5.1:73189630-73189649 | MS.gene017121:CDS | 45.0% |
| !! | TTGGGGTTACTGGGTTGATA+TGG | - | chr5.1:73189629-73189648 | MS.gene017121:CDS | 45.0% |
| !!! | AATTTACTTTTAATTTAATT+AGG | - | chr5.1:73189829-73189848 | MS.gene017121:CDS | 5.0% |
| !!! | TTTTTATTTATTTAAATTGT+AGG | - | chr5.1:73192139-73192158 | MS.gene017121:intron | 5.0% |
| ACCAGCAACAGAAAGGGTGA+AGG | + | chr5.1:73189789-73189808 | None:intergenic | 50.0% | |
| ATAGCCTGCGATAGCAAACC+AGG | + | chr5.1:73192601-73192620 | None:intergenic | 50.0% | |
| ATCGCCATAGCCATAGGAAC+AGG | + | chr5.1:73193218-73193237 | None:intergenic | 50.0% | |
| CACATGCTGCTAAACTGGCT+AGG | + | chr5.1:73192833-73192852 | None:intergenic | 50.0% | |
| CCAGCAACAGAAAGGGTGAA+GGG | + | chr5.1:73189788-73189807 | None:intergenic | 50.0% | |
| CTAGCCAGTTTAGCAGCATG+TGG | - | chr5.1:73192831-73192850 | MS.gene017121:intron | 50.0% | |
| GACACCACATGCTGCTAAAC+TGG | + | chr5.1:73192838-73192857 | None:intergenic | 50.0% | |
| GCCCATATTTGTAGTGGTGC+AGG | + | chr5.1:73191164-73191183 | None:intergenic | 50.0% | |
| GGTTCCTTCATGGCAGAAAC+AGG | - | chr5.1:73189275-73189294 | MS.gene017121:CDS | 50.0% | |
| GTGCTAGTAGTCTACCTCAG+CGG | - | chr5.1:73190694-73190713 | MS.gene017121:CDS | 50.0% | |
| GTTTGATTGCGGTTTCGTCC+TGG | - | chr5.1:73191314-73191333 | MS.gene017121:intron | 50.0% | |
| TATCATCCCAACCCCCACAT+AGG | + | chr5.1:73191950-73191969 | None:intergenic | 50.0% | |
| TGAGCTGTTGCAGTACCACT+TGG | + | chr5.1:73191484-73191503 | None:intergenic | 50.0% | |
| TGCTCCAAATGCATCAGCCT+TGG | + | chr5.1:73193324-73193343 | None:intergenic | 50.0% | |
| ! | CCATCTTCACTATCGGTGCT+TGG | - | chr5.1:73192787-73192806 | MS.gene017121:intron | 50.0% |
| ! | CTCATCGAGTTGTTCATCGG+AGG | + | chr5.1:73189223-73189242 | None:intergenic | 50.0% |
| ! | TTCACTATCGGTGCTTGGAC+AGG | - | chr5.1:73192792-73192811 | MS.gene017121:intron | 50.0% |
| ! | TTCACTGCTGGTGATGCTTG+TGG | - | chr5.1:73191616-73191635 | MS.gene017121:CDS | 50.0% |
| ! | TTTGGAGCAGCTGTTGCTTC+TGG | - | chr5.1:73193335-73193354 | MS.gene017121:CDS | 50.0% |
| !! | CCAAGCACCGATAGTGAAGA+TGG | + | chr5.1:73192790-73192809 | None:intergenic | 50.0% |
| AGGGCCAAGGCTGATGCATT+TGG | - | chr5.1:73193317-73193336 | MS.gene017121:CDS | 55.0% | |
| CCCTTCACCCTTTCTGTTGC+TGG | - | chr5.1:73189785-73189804 | MS.gene017121:CDS | 55.0% | |
| CCTGCGATAGCAAACCAGGA+GGG | + | chr5.1:73192597-73192616 | None:intergenic | 55.0% | |
| CTGCGATAGCAAACCAGGAG+GGG | + | chr5.1:73192596-73192615 | None:intergenic | 55.0% | |
| CTGCTACCTATGTGGGGGTT+GGG | - | chr5.1:73191941-73191960 | MS.gene017121:intron | 55.0% | |
| CTGGTGGAAAATGTGGGGGA+TGG | + | chr5.1:73192652-73192671 | None:intergenic | 55.0% | |
| GCAGAAGCTTGATAGGGCCA+AGG | - | chr5.1:73193304-73193323 | MS.gene017121:CDS | 55.0% | |
| TCAACGTCACGTCGTCGATG+AGG | + | chr5.1:73189198-73189217 | None:intergenic | 55.0% | |
| TCACGTCGTCGATGAGGTTC+TGG | + | chr5.1:73189192-73189211 | None:intergenic | 55.0% | |
| TCATTGGCAGTGCCAGCTTC+TGG | + | chr5.1:73190959-73190978 | None:intergenic | 55.0% | |
| TCTGCTACCTATGTGGGGGT+TGG | - | chr5.1:73191940-73191959 | MS.gene017121:intron | 55.0% | |
| ! | GGTGTCATGTGGCCTCTCAT+TGG | - | chr5.1:73192021-73192040 | MS.gene017121:intron | 55.0% |
| ! | TGGTCCCTTGCATCGACCTA+CGG | - | chr5.1:73192756-73192775 | MS.gene017121:intron | 55.0% |
| !! | GTAGGTGGGAGAGGAGCATT+TGG | + | chr5.1:73192522-73192541 | None:intergenic | 55.0% |
| ACTGGCTAGGATACCGCCGT+TGG | + | chr5.1:73192820-73192839 | None:intergenic | 60.0% | |
| GCCTGCGATAGCAAACCAGG+AGG | + | chr5.1:73192598-73192617 | None:intergenic | 60.0% | |
| GGGTGGGTCCCACTGTCAAT+AGG | - | chr5.1:73189729-73189748 | MS.gene017121:CDS | 60.0% | |
| GGTGCAGGGTATGCTGAACC+AGG | + | chr5.1:73193038-73193057 | None:intergenic | 60.0% | |
| GGTGCTTGGACAGGAGCCAA+CGG | - | chr5.1:73192801-73192820 | MS.gene017121:intron | 60.0% | |
| !! | CCCTCCTGGTTTGCTATCGC+AGG | - | chr5.1:73192594-73192613 | MS.gene017121:intron | 60.0% |
| GCTTGGACAGGAGCCAACGG+CGG | - | chr5.1:73192804-73192823 | MS.gene017121:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 73189183 | 73193490 | 73189183 | ID=MS.gene017121 |
| chr5.1 | mRNA | 73189183 | 73193490 | 73189183 | ID=MS.gene017121.t1;Parent=MS.gene017121 |
| chr5.1 | exon | 73193127 | 73193490 | 73193127 | ID=MS.gene017121.t1.exon1;Parent=MS.gene017121.t1 |
| chr5.1 | CDS | 73193127 | 73193490 | 73193127 | ID=cds.MS.gene017121.t1;Parent=MS.gene017121.t1 |
| chr5.1 | exon | 73191607 | 73191770 | 73191607 | ID=MS.gene017121.t1.exon2;Parent=MS.gene017121.t1 |
| chr5.1 | CDS | 73191607 | 73191770 | 73191607 | ID=cds.MS.gene017121.t1;Parent=MS.gene017121.t1 |
| chr5.1 | exon | 73190990 | 73191222 | 73190990 | ID=MS.gene017121.t1.exon3;Parent=MS.gene017121.t1 |
| chr5.1 | CDS | 73190990 | 73191222 | 73190990 | ID=cds.MS.gene017121.t1;Parent=MS.gene017121.t1 |
| chr5.1 | exon | 73190560 | 73190749 | 73190560 | ID=MS.gene017121.t1.exon4;Parent=MS.gene017121.t1 |
| chr5.1 | CDS | 73190560 | 73190749 | 73190560 | ID=cds.MS.gene017121.t1;Parent=MS.gene017121.t1 |
| chr5.1 | exon | 73189183 | 73190280 | 73189183 | ID=MS.gene017121.t1.exon5;Parent=MS.gene017121.t1 |
| chr5.1 | CDS | 73189183 | 73190280 | 73189183 | ID=cds.MS.gene017121.t1;Parent=MS.gene017121.t1 |
| Gene Sequence |
| Protein sequence |
