Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017126.t1 | XP_003617446.1 | 99.3 | 407 | 3 | 0 | 1 | 407 | 133 | 539 | 1.90E-232 | 814.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017126.t1 | Q9SHJ5 | 64.5 | 409 | 133 | 6 | 1 | 398 | 178 | 585 | 2.4e-146 | 520.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017126.t1 | G7K3C7 | 99.3 | 407 | 3 | 0 | 1 | 407 | 133 | 539 | 1.4e-232 | 814.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene005496 | MS.gene017126 | PPI |
| MS.gene07326 | MS.gene017126 | PPI |
| MS.gene017126 | MS.gene20875 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017126.t1 | MTR_5g091660 | 99.263 | 407 | 3 | 0 | 1 | 407 | 133 | 539 | 0.0 | 833 |
| MS.gene017126.t1 | MTR_3g448430 | 70.426 | 399 | 113 | 3 | 1 | 397 | 116 | 511 | 0.0 | 580 |
| MS.gene017126.t1 | MTR_3g048330 | 76.727 | 275 | 60 | 2 | 129 | 399 | 1 | 275 | 7.24e-153 | 433 |
| MS.gene017126.t1 | MTR_1g040500 | 51.951 | 410 | 184 | 4 | 1 | 402 | 92 | 496 | 1.83e-145 | 425 |
| MS.gene017126.t1 | MTR_5g061520 | 49.751 | 402 | 185 | 6 | 4 | 396 | 87 | 480 | 5.25e-137 | 401 |
| MS.gene017126.t1 | MTR_4g415290 | 52.099 | 405 | 182 | 6 | 1 | 399 | 93 | 491 | 5.36e-136 | 399 |
| MS.gene017126.t1 | MTR_1g086650 | 50.860 | 407 | 186 | 8 | 4 | 402 | 134 | 534 | 1.36e-135 | 399 |
| MS.gene017126.t1 | MTR_7g067380 | 52.239 | 402 | 181 | 6 | 1 | 397 | 96 | 491 | 1.26e-134 | 395 |
| MS.gene017126.t1 | MTR_5g080360 | 47.666 | 407 | 203 | 5 | 1 | 401 | 74 | 476 | 1.46e-128 | 379 |
| MS.gene017126.t1 | MTR_8g030620 | 46.359 | 412 | 209 | 6 | 1 | 405 | 99 | 505 | 1.36e-124 | 370 |
| MS.gene017126.t1 | MTR_7g075930 | 59.524 | 84 | 16 | 1 | 144 | 227 | 3 | 68 | 2.83e-24 | 95.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017126.t1 | AT1G06520 | 64.548 | 409 | 133 | 6 | 1 | 398 | 178 | 585 | 0.0 | 536 |
| MS.gene017126.t1 | AT1G02390 | 49.879 | 413 | 186 | 8 | 4 | 399 | 121 | 529 | 1.15e-130 | 386 |
| MS.gene017126.t1 | AT4G01950 | 49.877 | 407 | 187 | 10 | 6 | 399 | 117 | 519 | 4.02e-129 | 382 |
| MS.gene017126.t1 | AT3G11430 | 49.029 | 412 | 198 | 7 | 1 | 405 | 83 | 489 | 7.40e-129 | 380 |
| MS.gene017126.t1 | AT4G01950 | 49.877 | 407 | 187 | 10 | 6 | 399 | 145 | 547 | 1.13e-128 | 382 |
| MS.gene017126.t1 | AT2G38110 | 50.123 | 405 | 188 | 7 | 1 | 397 | 96 | 494 | 4.69e-128 | 379 |
| MS.gene017126.t1 | AT5G06090 | 47.445 | 411 | 208 | 6 | 1 | 406 | 81 | 488 | 6.20e-126 | 373 |
| MS.gene017126.t1 | AT4G00400 | 46.117 | 412 | 210 | 6 | 1 | 405 | 94 | 500 | 1.11e-123 | 367 |
| MS.gene017126.t1 | AT1G01610 | 46.117 | 412 | 209 | 8 | 1 | 404 | 94 | 500 | 1.27e-116 | 349 |
| MS.gene017126.t1 | AT3G11325 | 43.542 | 271 | 113 | 3 | 135 | 401 | 139 | 373 | 7.96e-72 | 230 |
| MS.gene017126.t1 | AT3G11325 | 43.542 | 271 | 113 | 3 | 135 | 401 | 142 | 376 | 9.63e-72 | 230 |
Find 69 sgRNAs with CRISPR-Local
Find 102 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATATGTTACTGCAGTTAA+AGG | 0.179389 | 5.3:+73725077 | None:intergenic |
| CTTCCATCATGAAATATTAA+TGG | 0.211384 | 5.3:+73725362 | None:intergenic |
| AGAGCACTTAAAGAGTATTT+TGG | 0.236160 | 5.3:-73725864 | MS.gene017126:CDS |
| AGTTATCATATTCAAATTCT+TGG | 0.253973 | 5.3:-73724759 | MS.gene017126:CDS |
| CCAGCACATGTAAGTTCTTT+AGG | 0.260758 | 5.3:+73724729 | None:intergenic |
| GGTGATAGAAAACCTGATAT+TGG | 0.266071 | 5.3:-73725843 | MS.gene017126:CDS |
| TCTCTACATGTTGTTCCTTC+AGG | 0.287385 | 5.3:+73724936 | None:intergenic |
| GCAATTTATAGAATCCTTCT+TGG | 0.289025 | 5.3:-73725269 | MS.gene017126:CDS |
| AAACAGTTGGGTGATGCTTT+GGG | 0.297561 | 5.3:-73724669 | MS.gene017126:CDS |
| TTACAAATTAGCACTTGAAT+TGG | 0.315340 | 5.3:-73725234 | MS.gene017126:CDS |
| GGCACAGAGTTACACACTTT+TGG | 0.319357 | 5.3:-73725936 | MS.gene017126:CDS |
| TAGCACTTGAATTGGGAGTT+TGG | 0.323759 | 5.3:-73725226 | MS.gene017126:CDS |
| TCATGAAATATTAATGGCTT+TGG | 0.325007 | 5.3:+73725368 | None:intergenic |
| TCCCTTGGCATGATTGAGTT+TGG | 0.327913 | 5.3:+73725398 | None:intergenic |
| GAACTAAACCTTAACAAATA+TGG | 0.328528 | 5.3:+73724912 | None:intergenic |
| TATGAGGTTCTTGCTTCAGC+TGG | 0.331253 | 5.3:-73726041 | MS.gene017126:CDS |
| ACAAACAAAACACCTTTGTT+TGG | 0.332605 | 5.3:+73725155 | None:intergenic |
| GAAGTTCCAATTCCAATATC+AGG | 0.337684 | 5.3:+73725831 | None:intergenic |
| GAAACAGTTGGGTGATGCTT+TGG | 0.337863 | 5.3:-73724670 | MS.gene017126:CDS |
| AGAAAACCTGATATTGGAAT+TGG | 0.340801 | 5.3:-73725837 | MS.gene017126:CDS |
| GGCTTTGGATATTTGTCCCT+TGG | 0.362641 | 5.3:+73725383 | None:intergenic |
| GATAAGTATATGATGCTTGC+AGG | 0.371641 | 5.3:-73724618 | MS.gene017126:CDS |
| AATTCAAGTGCTAATTTGTA+AGG | 0.371660 | 5.3:+73725236 | None:intergenic |
| TAGTTCATTGTTTGCTGAGT+TGG | 0.382543 | 5.3:-73724895 | MS.gene017126:CDS |
| AATGATGTGCTTAAGAAAAC+AGG | 0.399947 | 5.3:+73725107 | None:intergenic |
| GTAGAGAACCATATTTGTTA+AGG | 0.401265 | 5.3:-73724920 | MS.gene017126:CDS |
| TGAATATGATAACTTGGCTT+AGG | 0.405031 | 5.3:+73724768 | None:intergenic |
| AGCTAGCGGATTGAAGTGTT+TGG | 0.407360 | 5.3:-73724814 | MS.gene017126:CDS |
| GTTATCATATTCAAATTCTT+GGG | 0.414102 | 5.3:-73724758 | MS.gene017126:CDS |
| TACAAATTAGCACTTGAATT+GGG | 0.425342 | 5.3:-73725233 | MS.gene017126:CDS |
| TCTTAATCTTCAAGTTTATG+AGG | 0.426090 | 5.3:-73726057 | MS.gene017126:CDS |
| CACAAGTGTGCCTAGAGTTA+TGG | 0.426617 | 5.3:-73726003 | MS.gene017126:CDS |
| AGATTCTCTAAATAAAACTT+TGG | 0.454948 | 5.3:+73726077 | None:intergenic |
| GTGCCTAGAGTTATGGTAGA+AGG | 0.456952 | 5.3:-73725996 | MS.gene017126:CDS |
| ATGAGGTTCTTGCTTCAGCT+GGG | 0.457350 | 5.3:-73726040 | MS.gene017126:CDS |
| ATTGCTAAAATAATTCCAAT+TGG | 0.461462 | 5.3:+73725287 | None:intergenic |
| AGAATTTGAATATGATAACT+TGG | 0.464884 | 5.3:+73724762 | None:intergenic |
| ATGATGCTTGCAGGGAATGA+AGG | 0.469185 | 5.3:-73724609 | MS.gene017126:CDS |
| ATGCACACATAGGACATTGT+TGG | 0.480393 | 5.3:-73725132 | MS.gene017126:CDS |
| ATGTTCATGTGGCTACCAAT+TGG | 0.484031 | 5.3:-73725302 | MS.gene017126:CDS |
| TAATTATATACAGAAACAGT+TGG | 0.495466 | 5.3:-73724682 | MS.gene017126:CDS |
| TTTAAAACTTACCTTGCAAG+TGG | 0.500492 | 5.3:+73725782 | None:intergenic |
| GATTTAGTTGTTTGTCCTGA+AGG | 0.517928 | 5.3:-73724951 | MS.gene017126:CDS |
| CAAGTGCTAATTTGTAAGGA+AGG | 0.518754 | 5.3:+73725240 | None:intergenic |
| CCTAAAGAACTTACATGTGC+TGG | 0.521671 | 5.3:-73724729 | MS.gene017126:CDS |
| TCATATTCAAATTCTTGGGA+AGG | 0.522054 | 5.3:-73724754 | MS.gene017126:CDS |
| AGGACATGGAAAATGTTTCA+AGG | 0.522825 | 5.3:-73726109 | None:intergenic |
| GGACATGGAAAATGTTTCAA+GGG | 0.537352 | 5.3:-73726108 | None:intergenic |
| TGATGCTTGCAGGGAATGAA+GGG | 0.541271 | 5.3:-73724608 | MS.gene017126:CDS |
| TTGAAAGAGTATTTGAGTGT+CGG | 0.541833 | 5.3:-73725969 | MS.gene017126:CDS |
| AACAGTTGGGTGATGCTTTG+GGG | 0.543063 | 5.3:-73724668 | MS.gene017126:CDS |
| AAGCCATTAATATTTCATGA+TGG | 0.544073 | 5.3:-73725365 | MS.gene017126:CDS |
| AATCCTTCTACCATAACTCT+AGG | 0.553018 | 5.3:+73725993 | None:intergenic |
| AATTATATACAGAAACAGTT+GGG | 0.561344 | 5.3:-73724681 | MS.gene017126:CDS |
| CTTGAATTGGGAGTTTGGAG+TGG | 0.566374 | 5.3:-73725221 | MS.gene017126:CDS |
| ATGCAAAAGTTACTAAGAGA+AGG | 0.576242 | 5.3:-73724975 | MS.gene017126:CDS |
| GTCCAAACTCAATCATGCCA+AGG | 0.578628 | 5.3:-73725400 | MS.gene017126:CDS |
| GAACATGTAGAGTGTTGCTA+AGG | 0.578977 | 5.3:+73725319 | None:intergenic |
| TAGAGTGTTGCTAAGGGTGT+TGG | 0.593516 | 5.3:+73725326 | None:intergenic |
| ACATGAGTATTCATTGCCAC+AGG | 0.603998 | 5.3:+73724858 | None:intergenic |
| AAAGAACTTACATGTGCTGG+TGG | 0.610061 | 5.3:-73724726 | MS.gene017126:CDS |
| ATAAGTATATGATGCTTGCA+GGG | 0.611754 | 5.3:-73724617 | MS.gene017126:CDS |
| AAGGAAGGAAAATACCAAGA+AGG | 0.620364 | 5.3:+73725255 | None:intergenic |
| TCCAAACTCAATCATGCCAA+GGG | 0.637627 | 5.3:-73725399 | MS.gene017126:CDS |
| ACAAGAGACAGAAAACAAGA+TGG | 0.639648 | 5.3:-73725005 | MS.gene017126:CDS |
| ACACTTCAATCCGCTAGCTG+TGG | 0.639946 | 5.3:+73724818 | None:intergenic |
| CAACACTCTACATGTTCATG+TGG | 0.648188 | 5.3:-73725313 | MS.gene017126:CDS |
| GGCTAATGAGATAGTGCCTG+TGG | 0.689080 | 5.3:-73724874 | MS.gene017126:CDS |
| AACATGTAGAGTGTTGCTAA+GGG | 0.697607 | 5.3:+73725320 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATTAAAATTCCAAATA+AGG | + | chr5.3:73725095-73725114 | None:intergenic | 10.0% |
| !! | TAAATTAATTATGTTCTATA+TGG | + | chr5.3:73725153-73725172 | None:intergenic | 10.0% |
| !! | AACATTATTATTTCCTTATT+TGG | - | chr5.3:73725079-73725098 | MS.gene017126:CDS | 15.0% |
| !!! | AAGGAAATAATAATGTTTTT+TGG | + | chr5.3:73725076-73725095 | None:intergenic | 15.0% |
| !!! | ATTATTATTTTCTAACTGTT+GGG | - | chr5.3:73724977-73724996 | MS.gene017126:CDS | 15.0% |
| !! | AAAAAAACAAAACCAAACAA+AGG | - | chr5.3:73725506-73725525 | MS.gene017126:intron | 20.0% |
| !! | AATTATATACAGAAACAGTT+GGG | - | chr5.3:73725992-73726011 | MS.gene017126:CDS | 20.0% |
| !! | AGAATTTGAATATGATAACT+TGG | + | chr5.3:73725914-73725933 | None:intergenic | 20.0% |
| !! | AGATTCTCTAAATAAAACTT+TGG | + | chr5.3:73724599-73724618 | None:intergenic | 20.0% |
| !! | AGTTATCATATTCAAATTCT+TGG | - | chr5.3:73725914-73725933 | MS.gene017126:CDS | 20.0% |
| !! | ATTGCTAAAATAATTCCAAT+TGG | + | chr5.3:73725389-73725408 | None:intergenic | 20.0% |
| !! | GTTATCATATTCAAATTCTT+GGG | - | chr5.3:73725915-73725934 | MS.gene017126:CDS | 20.0% |
| !! | TAATTATATACAGAAACAGT+TGG | - | chr5.3:73725991-73726010 | MS.gene017126:CDS | 20.0% |
| !!! | AACAATTTTTTTTAAAGGGT+TGG | - | chr5.3:73724912-73724931 | MS.gene017126:CDS | 20.0% |
| !!! | CATTATTATTTTCTAACTGT+TGG | - | chr5.3:73724976-73724995 | MS.gene017126:CDS | 20.0% |
| !!! | TGTTTGGTTTTGTTTTTTTA+GGG | + | chr5.3:73725505-73725524 | None:intergenic | 20.0% |
| !!! | TTCAATGTACAAATTTTACT+AGG | - | chr5.3:73726029-73726048 | MS.gene017126:CDS | 20.0% |
| !!! | TTGTTTGGTTTTGTTTTTTT+AGG | + | chr5.3:73725506-73725525 | None:intergenic | 20.0% |
| ! | AAGCCATTAATATTTCATGA+TGG | - | chr5.3:73725308-73725327 | MS.gene017126:CDS | 25.0% |
| ! | CTTCCATCATGAAATATTAA+TGG | + | chr5.3:73725314-73725333 | None:intergenic | 25.0% |
| ! | GAACTAAACCTTAACAAATA+TGG | + | chr5.3:73725764-73725783 | None:intergenic | 25.0% |
| ! | GGATTCATCAAGAAAAAAAT+AGG | + | chr5.3:73725887-73725906 | None:intergenic | 25.0% |
| ! | TACAAATTAGCACTTGAATT+GGG | - | chr5.3:73725440-73725459 | MS.gene017126:CDS | 25.0% |
| ! | TCATGAAATATTAATGGCTT+TGG | + | chr5.3:73725308-73725327 | None:intergenic | 25.0% |
| ! | TTACAAATTAGCACTTGAAT+TGG | - | chr5.3:73725439-73725458 | MS.gene017126:CDS | 25.0% |
| !! | AATGTACAAATTTTACTAGG+AGG | - | chr5.3:73726032-73726051 | MS.gene017126:CDS | 25.0% |
| !! | AATTCAAGTGCTAATTTGTA+AGG | + | chr5.3:73725440-73725459 | None:intergenic | 25.0% |
| !! | ATGTACAAATTTTACTAGGA+GGG | - | chr5.3:73726033-73726052 | MS.gene017126:CDS | 25.0% |
| !! | TCTTAATCTTCAAGTTTATG+AGG | - | chr5.3:73724616-73724635 | MS.gene017126:CDS | 25.0% |
| !!! | GTTAATCTCACTGTTTTTAT+TGG | + | chr5.3:73725650-73725669 | None:intergenic | 25.0% |
| AATGATGTGCTTAAGAAAAC+AGG | + | chr5.3:73725569-73725588 | None:intergenic | 30.0% | |
| ACAAACAAAACACCTTTGTT+TGG | + | chr5.3:73725521-73725540 | None:intergenic | 30.0% | |
| AGAAAACCTGATATTGGAAT+TGG | - | chr5.3:73724836-73724855 | MS.gene017126:CDS | 30.0% | |
| ATAAGTATATGATGCTTGCA+GGG | - | chr5.3:73726056-73726075 | MS.gene017126:CDS | 30.0% | |
| ATGCAAAAGTTACTAAGAGA+AGG | - | chr5.3:73725698-73725717 | MS.gene017126:intron | 30.0% | |
| CTATATGTTACTGCAGTTAA+AGG | + | chr5.3:73725599-73725618 | None:intergenic | 30.0% | |
| GCAATTTATAGAATCCTTCT+TGG | - | chr5.3:73725404-73725423 | MS.gene017126:CDS | 30.0% | |
| GGCATAGATCTAAAAATCAA+AGG | - | chr5.3:73725473-73725492 | MS.gene017126:intron | 30.0% | |
| TCATATTCAAATTCTTGGGA+AGG | - | chr5.3:73725919-73725938 | MS.gene017126:CDS | 30.0% | |
| TGAATATGATAACTTGGCTT+AGG | + | chr5.3:73725908-73725927 | None:intergenic | 30.0% | |
| ! | GTAGAGAACCATATTTGTTA+AGG | - | chr5.3:73725753-73725772 | MS.gene017126:intron | 30.0% |
| ! | TTTAAAACTTACCTTGCAAG+TGG | + | chr5.3:73724894-73724913 | None:intergenic | 30.0% |
| !! | TTGAAAGAGTATTTGAGTGT+CGG | - | chr5.3:73724704-73724723 | MS.gene017126:CDS | 30.0% |
| !! | TTTTGTTTGTATGCACACAT+AGG | - | chr5.3:73725531-73725550 | MS.gene017126:intron | 30.0% |
| !!! | AGAGCACTTAAAGAGTATTT+TGG | - | chr5.3:73724809-73724828 | MS.gene017126:CDS | 30.0% |
| !!! | TTTTTTTAAAGGGTTGGCAA+AGG | - | chr5.3:73724918-73724937 | MS.gene017126:CDS | 30.0% |
| AAGGAAGGAAAATACCAAGA+AGG | + | chr5.3:73725421-73725440 | None:intergenic | 35.0% | |
| AATCCTTCTACCATAACTCT+AGG | + | chr5.3:73724683-73724702 | None:intergenic | 35.0% | |
| ACAAGAGACAGAAAACAAGA+TGG | - | chr5.3:73725668-73725687 | MS.gene017126:intron | 35.0% | |
| GAAGTTCCAATTCCAATATC+AGG | + | chr5.3:73724845-73724864 | None:intergenic | 35.0% | |
| GATAAGTATATGATGCTTGC+AGG | - | chr5.3:73726055-73726074 | MS.gene017126:CDS | 35.0% | |
| GATTTAGTTGTTTGTCCTGA+AGG | - | chr5.3:73725722-73725741 | MS.gene017126:intron | 35.0% | |
| GGTGATAGAAAACCTGATAT+TGG | - | chr5.3:73724830-73724849 | MS.gene017126:CDS | 35.0% | |
| ! | ACTCATGTCAGCATGTTTTA+TGG | - | chr5.3:73725830-73725849 | MS.gene017126:CDS | 35.0% |
| ! | CAAGTGCTAATTTGTAAGGA+AGG | + | chr5.3:73725436-73725455 | None:intergenic | 35.0% |
| ! | CTCATGTCAGCATGTTTTAT+GGG | - | chr5.3:73725831-73725850 | MS.gene017126:CDS | 35.0% |
| ! | TAGTTCATTGTTTGCTGAGT+TGG | - | chr5.3:73725778-73725797 | MS.gene017126:intron | 35.0% |
| ! | TCTTTTCATTTCCACTTGCA+AGG | - | chr5.3:73724880-73724899 | MS.gene017126:CDS | 35.0% |
| !! | AACATGTAGAGTGTTGCTAA+GGG | + | chr5.3:73725356-73725375 | None:intergenic | 35.0% |
| AAACAGTTGGGTGATGCTTT+GGG | - | chr5.3:73726004-73726023 | MS.gene017126:CDS | 40.0% | |
| AAAGAACTTACATGTGCTGG+TGG | - | chr5.3:73725947-73725966 | MS.gene017126:CDS | 40.0% | |
| ACATGAGTATTCATTGCCAC+AGG | + | chr5.3:73725818-73725837 | None:intergenic | 40.0% | |
| ATGCACACATAGGACATTGT+TGG | - | chr5.3:73725541-73725560 | MS.gene017126:intron | 40.0% | |
| ATGTTCATGTGGCTACCAAT+TGG | - | chr5.3:73725371-73725390 | MS.gene017126:CDS | 40.0% | |
| CAACACTCTACATGTTCATG+TGG | - | chr5.3:73725360-73725379 | MS.gene017126:CDS | 40.0% | |
| CCAGCACATGTAAGTTCTTT+AGG | + | chr5.3:73725947-73725966 | None:intergenic | 40.0% | |
| CCTAAAGAACTTACATGTGC+TGG | - | chr5.3:73725944-73725963 | MS.gene017126:CDS | 40.0% | |
| TAGCACTTGAATTGGGAGTT+TGG | - | chr5.3:73725447-73725466 | MS.gene017126:intron | 40.0% | |
| TCCAAACTCAATCATGCCAA+GGG | - | chr5.3:73725274-73725293 | MS.gene017126:CDS | 40.0% | |
| TCTCTACATGTTGTTCCTTC+AGG | + | chr5.3:73725740-73725759 | None:intergenic | 40.0% | |
| TTCCTGTCATAATCATGCAG+AGG | + | chr5.3:73725219-73725238 | None:intergenic | 40.0% | |
| ! | TGTGTGAGTGTTGTAAACCT+GGG | - | chr5.3:73725027-73725046 | MS.gene017126:CDS | 40.0% |
| !! | ACTTTTGGTTGCTACTTCAC+TGG | - | chr5.3:73724752-73724771 | MS.gene017126:CDS | 40.0% |
| !! | GAACATGTAGAGTGTTGCTA+AGG | + | chr5.3:73725357-73725376 | None:intergenic | 40.0% |
| !!! | ACTGGTTTTCTCACTAGTTC+TGG | - | chr5.3:73724770-73724789 | MS.gene017126:CDS | 40.0% |
| !!! | TTGAGTGTCGGTGATGTTTT+AGG | - | chr5.3:73724716-73724735 | MS.gene017126:CDS | 40.0% |
| AACAGTTGGGTGATGCTTTG+GGG | - | chr5.3:73726005-73726024 | MS.gene017126:CDS | 45.0% | |
| ATGAGGTTCTTGCTTCAGCT+GGG | - | chr5.3:73724633-73724652 | MS.gene017126:CDS | 45.0% | |
| ATGATGCTTGCAGGGAATGA+AGG | - | chr5.3:73726064-73726083 | MS.gene017126:CDS | 45.0% | |
| CACAAGTGTGCCTAGAGTTA+TGG | - | chr5.3:73724670-73724689 | MS.gene017126:CDS | 45.0% | |
| CACCTCTGCATGATTATGAC+AGG | - | chr5.3:73725214-73725233 | MS.gene017126:CDS | 45.0% | |
| CTGTCATAATCATGCAGAGG+TGG | + | chr5.3:73725216-73725235 | None:intergenic | 45.0% | |
| CTTGAATTGGGAGTTTGGAG+TGG | - | chr5.3:73725452-73725471 | MS.gene017126:intron | 45.0% | |
| GAAACAGTTGGGTGATGCTT+TGG | - | chr5.3:73726003-73726022 | MS.gene017126:CDS | 45.0% | |
| GAAATCGAACTCAATACCCC+AGG | + | chr5.3:73725047-73725066 | None:intergenic | 45.0% | |
| GTCCAAACTCAATCATGCCA+AGG | - | chr5.3:73725273-73725292 | MS.gene017126:CDS | 45.0% | |
| GTGCCTAGAGTTATGGTAGA+AGG | - | chr5.3:73724677-73724696 | MS.gene017126:CDS | 45.0% | |
| TATGAGGTTCTTGCTTCAGC+TGG | - | chr5.3:73724632-73724651 | MS.gene017126:CDS | 45.0% | |
| TCCCTTGGCATGATTGAGTT+TGG | + | chr5.3:73725278-73725297 | None:intergenic | 45.0% | |
| TGATGCTTGCAGGGAATGAA+GGG | - | chr5.3:73726065-73726084 | MS.gene017126:CDS | 45.0% | |
| TTGGGTCTAGTGCAAGTAGT+TGG | - | chr5.3:73724995-73725014 | MS.gene017126:CDS | 45.0% | |
| ! | GGCACAGAGTTACACACTTT+TGG | - | chr5.3:73724737-73724756 | MS.gene017126:CDS | 45.0% |
| ! | GTGTGAGTGTTGTAAACCTG+GGG | - | chr5.3:73725028-73725047 | MS.gene017126:CDS | 45.0% |
| ! | GTGTGTGAGTGTTGTAAACC+TGG | - | chr5.3:73725026-73725045 | MS.gene017126:CDS | 45.0% |
| ! | TTTTATGGGACCACAGCTAG+CGG | - | chr5.3:73725845-73725864 | MS.gene017126:CDS | 45.0% |
| !! | AGCTAGCGGATTGAAGTGTT+TGG | - | chr5.3:73725859-73725878 | MS.gene017126:CDS | 45.0% |
| !! | GGCTTTGGATATTTGTCCCT+TGG | + | chr5.3:73725293-73725312 | None:intergenic | 45.0% |
| !! | TAGAGTGTTGCTAAGGGTGT+TGG | + | chr5.3:73725350-73725369 | None:intergenic | 45.0% |
| !!! | TTTAAACAATTTTTTTTAAA+GGG | - | chr5.3:73724908-73724927 | MS.gene017126:CDS | 5.0% |
| !!! | TTTTAAACAATTTTTTTTAA+AGG | - | chr5.3:73724907-73724926 | MS.gene017126:CDS | 5.0% |
| ACACTTCAATCCGCTAGCTG+TGG | + | chr5.3:73725858-73725877 | None:intergenic | 50.0% | |
| GGCTAATGAGATAGTGCCTG+TGG | - | chr5.3:73725799-73725818 | MS.gene017126:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 73724569 | 73726126 | 73724569 | ID=MS.gene017126 |
| chr5.3 | mRNA | 73724569 | 73726126 | 73724569 | ID=MS.gene017126.t1;Parent=MS.gene017126 |
| chr5.3 | exon | 73725794 | 73726126 | 73725794 | ID=MS.gene017126.t1.exon1;Parent=MS.gene017126.t1 |
| chr5.3 | CDS | 73725794 | 73726126 | 73725794 | ID=cds.MS.gene017126.t1;Parent=MS.gene017126.t1 |
| chr5.3 | exon | 73724569 | 73725459 | 73724569 | ID=MS.gene017126.t1.exon2;Parent=MS.gene017126.t1 |
| chr5.3 | CDS | 73724569 | 73725459 | 73724569 | ID=cds.MS.gene017126.t1;Parent=MS.gene017126.t1 |
| Gene Sequence |
| Protein sequence |
