AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene017201

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017201.t1 MTR_5g093090 96.642 268 9 0 1 268 25 292 0.0 544
MS.gene017201.t1 MTR_5g093090 96.269 268 10 0 1 268 25 292 0.0 541
MS.gene017201.t1 MTR_3g052490 70.943 265 77 0 2 266 30 294 3.18e-139 396
MS.gene017201.t1 MTR_3g052480 69.434 265 80 1 3 266 32 296 2.08e-136 389
MS.gene017201.t1 MTR_5g093090 96.721 183 6 0 1 183 25 207 7.68e-130 367
MS.gene017201.t1 MTR_3g052580 65.283 265 91 1 2 266 26 289 1.23e-124 360
MS.gene017201.t1 MTR_3g052580 65.283 265 91 1 2 266 25 288 3.01e-124 360
MS.gene017201.t1 MTR_4g122200 35.662 272 159 5 2 266 33 295 6.02e-55 181
MS.gene017201.t1 MTR_4g035353 37.818 275 155 6 2 269 29 294 2.02e-53 177
MS.gene017201.t1 MTR_2g033920 35.662 272 159 5 2 266 33 295 1.94e-52 173
MS.gene017201.t1 MTR_2g033920 35.662 272 159 5 2 266 33 295 5.22e-52 174
MS.gene017201.t1 MTR_2g033930 33.457 269 165 5 3 266 31 290 9.57e-52 173
MS.gene017201.t1 MTR_5g078210 34.074 270 169 3 4 270 25 288 1.84e-51 172
MS.gene017201.t1 MTR_5g078210 34.586 266 165 3 4 266 25 284 1.87e-51 171
MS.gene017201.t1 MTR_4g056160 36.861 274 159 6 1 268 24 289 4.87e-50 168
MS.gene017201.t1 MTR_3g021460 38.686 274 153 9 1 268 28 292 3.21e-49 166
MS.gene017201.t1 MTR_3g005650 37.037 270 157 5 2 268 28 287 1.34e-48 164
MS.gene017201.t1 MTR_2g461580 37.226 274 157 9 1 268 28 292 8.19e-48 162
MS.gene017201.t1 MTR_3g024510 37.818 275 156 8 2 270 36 301 1.36e-47 162
MS.gene017201.t1 MTR_8g074570 34.082 267 170 5 3 267 37 299 3.85e-47 161
MS.gene017201.t1 MTR_8g074560 33.700 273 163 7 2 263 29 294 1.99e-46 159
MS.gene017201.t1 MTR_1g024890 36.296 270 156 6 4 266 32 292 2.14e-46 159
MS.gene017201.t1 MTR_0565s0010 36.957 276 156 9 2 269 30 295 2.45e-45 156
MS.gene017201.t1 MTR_8g079050 35.145 276 161 7 4 268 37 305 2.47e-45 156
MS.gene017201.t1 MTR_1g079540 34.432 273 165 6 4 270 31 295 2.51e-45 156
MS.gene017201.t1 MTR_7g116570 33.582 268 166 5 4 266 34 294 1.44e-44 154
MS.gene017201.t1 MTR_8g087890 35.507 276 159 8 2 269 29 293 1.48e-44 154
MS.gene017201.t1 MTR_3g082830 33.212 274 170 6 2 270 36 301 1.56e-44 154
MS.gene017201.t1 MTR_3g098270 35.252 278 159 7 4 270 34 301 1.58e-44 155
MS.gene017201.t1 MTR_4g108690 33.835 266 164 4 6 266 29 287 1.62e-44 154
MS.gene017201.t1 MTR_1g069175 35.424 271 159 7 4 266 33 295 3.99e-44 153
MS.gene017201.t1 MTR_0009s0250 36.667 270 152 7 2 267 31 285 4.08e-44 152
MS.gene017201.t1 MTR_2g084585 35.793 271 161 6 1 266 27 289 1.37e-43 151
MS.gene017201.t1 MTR_3g435540 32.576 264 170 3 6 266 25 283 1.94e-43 151
MS.gene017201.t1 MTR_4g056280 34.926 272 164 6 1 267 27 290 2.24e-43 151
MS.gene017201.t1 MTR_8g074580 36.059 269 163 5 3 267 43 306 4.02e-43 152
MS.gene017201.t1 MTR_5g074270 35.094 265 158 6 4 262 33 289 1.02e-42 149
MS.gene017201.t1 MTR_2g044100 33.086 269 163 5 4 266 43 300 3.37e-42 149
MS.gene017201.t1 MTR_8g014910 33.455 275 170 6 1 270 29 295 4.02e-42 147
MS.gene017201.t1 MTR_5g084770 34.191 272 165 6 2 267 26 289 4.86e-42 147
MS.gene017201.t1 MTR_7g116510 32.593 270 167 5 4 266 25 286 1.39e-41 146
MS.gene017201.t1 MTR_2g100620 32.727 275 172 6 1 270 28 294 3.51e-41 145
MS.gene017201.t1 MTR_5g084790 33.577 274 169 6 2 270 30 295 9.17e-41 144
MS.gene017201.t1 MTR_2g015080 34.173 278 164 7 2 266 36 307 3.90e-40 143
MS.gene017201.t1 MTR_7g116520 32.342 269 168 5 4 266 34 294 7.97e-40 142
MS.gene017201.t1 MTR_5g009100 31.852 270 172 5 6 270 48 310 1.12e-39 142
MS.gene017201.t1 MTR_7g008060 32.836 268 155 6 4 266 33 280 1.95e-39 140
MS.gene017201.t1 MTR_1g079530 34.298 242 147 5 4 240 29 263 3.81e-39 140
MS.gene017201.t1 MTR_6g021530 32.721 272 169 7 2 266 26 290 4.44e-39 140
MS.gene017201.t1 MTR_4g087985 33.696 276 162 7 4 266 36 303 4.54e-39 140
MS.gene017201.t1 MTR_7g116500 32.714 269 167 6 4 266 33 293 4.81e-39 140
MS.gene017201.t1 MTR_8g031420 34.926 272 156 7 4 270 35 290 6.64e-39 139
MS.gene017201.t1 MTR_5g084750 32.222 270 170 6 2 266 28 289 9.68e-39 139
MS.gene017201.t1 MTR_8g087870 33.740 246 146 7 2 240 27 262 1.96e-38 138
MS.gene017201.t1 MTR_8g031390 34.572 269 154 8 4 267 37 288 2.59e-38 137
MS.gene017201.t1 MTR_8g075230 33.091 275 161 7 2 266 34 295 3.37e-38 137
MS.gene017201.t1 MTR_3g464730 32.841 271 168 7 2 266 26 288 4.84e-38 137
MS.gene017201.t1 MTR_8g031390 34.572 269 154 8 4 267 37 288 9.88e-38 137
MS.gene017201.t1 MTR_8g031430 35.316 269 153 8 4 267 37 289 2.72e-37 135
MS.gene017201.t1 MTR_4g019880 32.721 272 165 7 4 266 32 294 7.27e-37 134
MS.gene017201.t1 MTR_5g022630 32.364 275 173 6 2 270 41 308 2.79e-36 132
MS.gene017201.t1 MTR_3g023220 35.417 240 138 7 2 236 31 258 7.83e-36 131
MS.gene017201.t1 MTR_5g022640 31.636 275 174 7 2 270 41 307 2.01e-35 130
MS.gene017201.t1 MTR_8g022810 30.741 270 169 7 4 267 41 298 4.17e-35 129
MS.gene017201.t1 MTR_2g017965 31.655 278 167 9 2 270 31 294 1.31e-34 128
MS.gene017201.t1 MTR_2g017955 33.333 246 147 7 2 240 31 266 3.30e-34 127
MS.gene017201.t1 MTR_8g022790 32.117 274 167 8 4 270 37 298 1.49e-33 125
MS.gene017201.t1 MTR_3g005660 32.975 279 166 10 2 269 34 302 2.13e-33 125
MS.gene017201.t1 MTR_1g025760 33.942 274 161 9 2 266 78 340 2.70e-33 125
MS.gene017201.t1 MTR_1g025680 34.066 273 168 5 2 269 32 297 6.32e-33 125
MS.gene017201.t1 MTR_2g017925 33.735 249 142 8 2 240 31 266 6.98e-33 124
MS.gene017201.t1 MTR_8g031400 33.704 270 156 9 4 267 37 289 8.87e-33 123
MS.gene017201.t1 MTR_8g075200 31.227 269 172 6 3 266 40 300 6.51e-32 122
MS.gene017201.t1 MTR_2g017875 29.545 264 169 7 2 257 32 286 1.72e-31 119
MS.gene017201.t1 MTR_1g025700 31.111 270 173 6 2 266 48 309 2.55e-31 119
MS.gene017201.t1 MTR_3g114090 31.752 274 173 6 3 270 35 300 1.41e-30 117
MS.gene017201.t1 MTR_1g025780 30.403 273 178 5 2 270 39 303 2.77e-30 116
MS.gene017201.t1 MTR_8g075220 31.022 274 171 8 3 266 39 304 5.26e-30 115
MS.gene017201.t1 MTR_1g079590 41.216 148 80 2 4 151 31 171 8.51e-30 112
MS.gene017201.t1 MTR_5g083040 27.798 277 181 5 2 267 30 298 1.43e-29 114
MS.gene017201.t1 MTR_1g025720 30.769 273 176 6 3 270 36 300 1.81e-28 111
MS.gene017201.t1 MTR_2g017915 35.268 224 121 8 2 214 31 241 2.13e-28 111
MS.gene017201.t1 MTR_8g022810 33.014 209 125 6 4 209 41 237 1.24e-27 108
MS.gene017201.t1 MTR_4g036375 38.562 153 85 4 1 152 27 171 2.24e-26 102
MS.gene017201.t1 MTR_1g025910 32.700 263 163 6 9 266 41 294 2.65e-26 106
MS.gene017201.t1 MTR_2g018015 32.707 266 148 11 2 259 34 276 1.44e-25 102
MS.gene017201.t1 MTR_3g114120 28.929 280 174 8 2 270 45 310 1.05e-24 101
MS.gene017201.t1 MTR_6g049220 48.454 97 42 3 1 96 27 116 2.59e-21 88.6
MS.gene017201.t1 MTR_7g033165 29.758 289 158 11 3 266 32 300 1.29e-20 89.7
MS.gene017201.t1 MTR_2g087292 49.485 97 43 3 2 98 31 121 1.32e-20 89.0
MS.gene017201.t1 MTR_7g033165 29.758 289 158 11 3 266 32 300 3.35e-20 89.4
MS.gene017201.t1 MTR_7g087190 26.897 290 164 11 3 266 42 309 1.33e-19 87.8
MS.gene017201.t1 MTR_7g116870 27.273 275 176 8 4 267 33 294 1.79e-19 87.4
MS.gene017201.t1 MTR_2g015630 31.541 279 162 12 9 268 36 304 4.92e-19 86.3
MS.gene017201.t1 MTR_2g015580 29.225 284 171 13 4 268 47 319 6.03e-19 85.9
MS.gene017201.t1 MTR_1g030275 28.920 287 165 12 3 269 38 305 7.18e-19 85.5
MS.gene017201.t1 MTR_6g007090 27.972 286 167 10 3 268 38 304 4.13e-18 83.2
MS.gene017201.t1 MTR_1g030268 27.562 283 168 13 3 266 39 303 4.54e-18 82.8
MS.gene017201.t1 MTR_1g030268 27.562 283 168 13 3 266 39 303 7.08e-18 82.8
MS.gene017201.t1 MTR_1g030230 26.298 289 166 10 2 266 30 295 7.84e-18 82.4
MS.gene017201.t1 MTR_0127s0040 30.178 169 105 6 109 267 4 169 9.31e-17 77.8
MS.gene017201.t1 MTR_2g079090 27.562 283 166 12 4 266 30 293 9.84e-17 79.3
MS.gene017201.t1 MTR_1g030220 26.502 283 171 10 4 267 40 304 1.59e-16 79.0
MS.gene017201.t1 MTR_6g007095 27.817 284 166 11 3 266 40 304 1.93e-16 79.3
MS.gene017201.t1 MTR_6g007095 26.749 243 144 9 43 266 404 631 2.34e-13 70.1
MS.gene017201.t1 MTR_2g079080 27.562 283 166 12 4 266 30 293 2.18e-16 78.2
MS.gene017201.t1 MTR_7g111780 27.046 281 168 12 3 268 34 292 6.10e-16 77.0
MS.gene017201.t1 MTR_0029s0050 27.208 283 167 12 4 266 30 293 2.46e-15 75.1
MS.gene017201.t1 MTR_8g038680 28.028 289 163 11 3 266 27 295 2.59e-15 75.1
MS.gene017201.t1 MTR_0029s0100 27.208 283 167 12 4 266 30 293 3.19e-15 75.1
MS.gene017201.t1 MTR_1g082390 25.714 280 177 8 3 267 30 293 3.26e-15 75.1
MS.gene017201.t1 MTR_8g028160 24.653 288 177 10 5 267 37 309 4.01e-15 74.7
MS.gene017201.t1 MTR_8g089805 26.408 284 172 11 3 266 39 305 9.80e-15 73.6
MS.gene017201.t1 MTR_6g007100 27.562 283 168 11 3 268 32 294 6.13e-14 71.2
MS.gene017201.t1 MTR_7g113860 26.335 281 176 8 3 267 28 293 9.21e-14 70.9
MS.gene017201.t1 MTR_3g463960 25.448 279 179 10 4 266 44 309 1.03e-13 70.9
MS.gene017201.t1 MTR_3g463950 25.448 279 179 10 4 266 44 309 1.03e-13 70.9
MS.gene017201.t1 MTR_3g463970 25.448 279 179 10 4 266 44 309 1.03e-13 70.9
MS.gene017201.t1 MTR_3g463940 25.448 279 179 10 4 266 44 309 1.03e-13 70.9
MS.gene017201.t1 MTR_4g104240 28.159 277 171 11 5 267 40 302 1.14e-13 70.5
MS.gene017201.t1 MTR_3g069780 25.714 280 175 9 4 266 30 293 1.58e-13 70.1
MS.gene017201.t1 MTR_3g463930 24.648 284 182 9 4 266 44 316 3.83e-13 68.9
MS.gene017201.t1 MTR_2g015590 26.897 290 172 11 4 270 31 303 5.58e-13 68.2
MS.gene017201.t1 MTR_2g015590 26.923 286 169 11 4 266 31 299 2.65e-12 66.6
MS.gene017201.t1 MTR_7g113860 25.448 279 179 8 3 266 34 298 3.12e-12 66.2
MS.gene017201.t1 MTR_3g448360 24.731 279 184 9 4 268 29 295 1.06e-11 64.7
MS.gene017201.t1 MTR_1g060490 25.468 267 172 10 5 267 38 281 1.12e-11 64.7
MS.gene017201.t1 MTR_5g062890 52.727 55 26 0 1 55 25 79 1.21e-11 60.5
MS.gene017201.t1 MTR_1g060500 25.843 267 176 10 5 267 41 289 1.62e-11 63.9
MS.gene017201.t1 MTR_1g092690 25.969 258 157 10 5 259 52 278 1.86e-11 63.9
MS.gene017201.t1 MTR_1g092740 26.792 265 157 12 5 264 39 271 3.06e-11 63.2
MS.gene017201.t1 MTR_2g017925 30.833 120 72 3 126 237 44 160 6.75e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017201.t1 AT5G55050 53.358 268 121 3 2 266 37 303 8.22e-89 268
MS.gene017201.t1 AT5G37690 37.407 270 160 3 4 270 27 290 2.42e-58 190
MS.gene017201.t1 AT5G37690 36.431 269 154 4 5 270 28 282 4.67e-53 176
MS.gene017201.t1 AT5G08460 36.201 279 160 6 1 269 46 316 1.80e-51 173
MS.gene017201.t1 AT3G50400 37.634 279 155 8 4 270 34 305 3.37e-51 172
MS.gene017201.t1 AT5G41890 36.000 275 156 8 6 267 33 300 6.46e-47 160
MS.gene017201.t1 AT1G71250 34.296 277 164 6 2 270 39 305 1.30e-46 160
MS.gene017201.t1 AT2G23540 35.971 278 160 7 4 270 48 318 1.69e-46 160
MS.gene017201.t1 AT1G29660 36.496 274 157 7 2 268 30 293 3.45e-46 159
MS.gene017201.t1 AT3G53100 35.793 271 161 7 1 266 26 288 4.17e-46 158
MS.gene017201.t1 AT5G15720 34.409 279 165 6 1 270 27 296 4.22e-46 158
MS.gene017201.t1 AT5G15720 34.909 275 161 6 1 266 27 292 7.95e-46 156
MS.gene017201.t1 AT1G71691 34.559 272 164 6 1 268 52 313 1.18e-44 155
MS.gene017201.t1 AT1G71691 34.444 270 163 6 1 266 52 311 1.62e-44 153
MS.gene017201.t1 AT1G06990 34.672 274 164 6 1 267 34 299 2.31e-44 154
MS.gene017201.t1 AT1G58430 34.799 273 164 7 1 266 32 297 4.71e-44 153
MS.gene017201.t1 AT1G29670 35.036 274 162 7 2 269 30 293 2.59e-43 151
MS.gene017201.t1 AT2G04570 35.165 273 164 6 2 269 26 290 7.81e-43 149
MS.gene017201.t1 AT2G42990 33.942 274 168 6 2 270 26 291 8.23e-43 149
MS.gene017201.t1 AT4G16230 37.004 227 126 7 2 220 28 245 1.12e-42 146
MS.gene017201.t1 AT1G29670 35.036 274 162 7 2 269 98 361 1.92e-42 150
MS.gene017201.t1 AT2G24560 34.307 274 166 7 1 267 31 297 2.72e-42 147
MS.gene017201.t1 AT2G40250 34.058 276 164 5 2 267 34 301 6.65e-42 147
MS.gene017201.t1 AT1G20120 33.579 271 163 7 3 266 77 337 1.31e-41 147
MS.gene017201.t1 AT2G30310 34.432 273 165 7 1 266 31 296 4.36e-41 145
MS.gene017201.t1 AT1G74460 33.459 266 165 5 6 266 25 283 5.26e-41 145
MS.gene017201.t1 AT2G24560 34.066 273 166 7 1 266 31 296 6.04e-41 145
MS.gene017201.t1 AT4G18970 32.971 276 169 8 1 269 25 291 9.11e-41 144
MS.gene017201.t1 AT5G45670 35.018 277 162 9 1 269 26 292 1.15e-40 144
MS.gene017201.t1 AT2G30220 34.066 273 166 7 1 266 30 295 2.10e-40 143
MS.gene017201.t1 AT5G03820 34.799 273 163 6 1 266 30 294 2.56e-40 143
MS.gene017201.t1 AT4G18970 32.971 276 169 8 1 269 25 291 4.08e-40 144
MS.gene017201.t1 AT5G03820 34.799 273 163 6 1 266 58 322 6.78e-40 142
MS.gene017201.t1 AT5G33370 31.970 269 169 5 4 266 30 290 9.01e-40 141
MS.gene017201.t1 AT5G45950 32.472 271 172 6 2 270 38 299 1.09e-39 141
MS.gene017201.t1 AT5G33370 31.970 269 169 5 4 266 30 290 1.64e-39 141
MS.gene017201.t1 AT3G16370 33.091 275 171 6 1 270 27 293 1.71e-39 140
MS.gene017201.t1 AT5G22810 32.847 274 168 7 1 266 31 296 2.29e-39 140
MS.gene017201.t1 AT1G75920 35.897 273 160 7 3 268 28 292 3.02e-39 140
MS.gene017201.t1 AT4G10950 30.000 270 177 4 2 266 69 331 3.57e-39 141
MS.gene017201.t1 AT1G20130 34.657 277 161 6 2 266 182 450 3.59e-39 143
MS.gene017201.t1 AT1G20130 34.657 277 161 6 2 266 202 470 4.98e-39 143
MS.gene017201.t1 AT5G45960 33.333 276 164 8 2 266 45 311 5.44e-39 140
MS.gene017201.t1 AT5G03810 33.088 272 168 6 1 266 27 290 2.30e-38 138
MS.gene017201.t1 AT5G18430 32.593 270 168 5 4 266 28 290 3.26e-38 137
MS.gene017201.t1 AT1G33811 32.624 282 167 9 2 270 32 303 1.20e-37 136
MS.gene017201.t1 AT1G53920 32.967 273 160 9 2 266 46 303 1.53e-37 136
MS.gene017201.t1 AT2G31540 33.942 274 165 9 1 266 32 297 1.61e-37 135
MS.gene017201.t1 AT4G26790 33.456 272 162 8 3 266 28 288 4.85e-37 134
MS.gene017201.t1 AT4G26790 33.456 272 162 8 3 266 28 288 4.85e-37 134
MS.gene017201.t1 AT1G75880 32.234 273 175 4 2 270 50 316 7.15e-37 134
MS.gene017201.t1 AT4G28780 30.970 268 173 4 4 266 31 291 1.02e-36 134
MS.gene017201.t1 AT1G20135 31.273 275 169 7 4 270 29 291 2.10e-36 132
MS.gene017201.t1 AT1G75920 34.375 288 159 8 3 268 23 302 3.74e-36 132
MS.gene017201.t1 AT2G03980 35.019 257 151 6 3 255 42 286 5.14e-36 132
MS.gene017201.t1 AT2G03980 35.019 257 151 6 3 255 42 286 5.14e-36 132
MS.gene017201.t1 AT2G03980 35.019 257 151 6 3 255 42 286 5.14e-36 132
MS.gene017201.t1 AT2G03980 35.019 257 151 6 3 255 42 286 5.14e-36 132
MS.gene017201.t1 AT1G75880 32.234 273 174 5 2 270 50 315 5.72e-36 132
MS.gene017201.t1 AT1G75890 30.882 272 178 4 3 270 46 311 6.21e-36 132
MS.gene017201.t1 AT4G10950 30.000 270 173 5 2 266 69 327 6.26e-36 132
MS.gene017201.t1 AT1G75890 30.882 272 178 4 3 270 75 340 1.17e-35 131
MS.gene017201.t1 AT3G04290 30.855 269 172 6 4 266 29 289 2.54e-35 130
MS.gene017201.t1 AT1G75890 29.577 284 179 4 3 270 46 324 1.90e-34 128
MS.gene017201.t1 AT1G20132 33.457 269 166 7 3 266 60 320 2.80e-34 127
MS.gene017201.t1 AT1G71120 31.250 272 169 8 2 268 29 287 2.92e-34 127
MS.gene017201.t1 AT1G75910 33.212 274 167 8 3 268 27 292 4.58e-34 126
MS.gene017201.t1 AT1G73610 32.721 272 163 7 2 266 33 291 6.67e-33 123
MS.gene017201.t1 AT4G30140 31.618 272 162 9 3 269 32 284 2.75e-32 121
MS.gene017201.t1 AT1G75930 33.333 273 169 7 4 270 29 294 2.78e-32 121
MS.gene017201.t1 AT5G63170 31.716 268 172 6 2 266 26 285 5.05e-32 120
MS.gene017201.t1 AT1G75900 29.197 274 182 5 1 270 40 305 1.00e-31 120
MS.gene017201.t1 AT3G14820 31.387 274 171 8 2 270 30 291 1.48e-31 120
MS.gene017201.t1 AT1G53940 32.090 268 168 6 4 266 39 297 1.63e-31 119
MS.gene017201.t1 AT2G04020 37.073 205 116 5 3 205 42 235 5.43e-31 116
MS.gene017201.t1 AT1G53940 32.090 268 168 6 4 266 39 297 7.69e-31 118
MS.gene017201.t1 AT2G19050 32.171 258 153 9 2 253 29 270 9.15e-31 116
MS.gene017201.t1 AT1G53990 31.599 269 161 8 4 266 35 286 9.48e-31 118
MS.gene017201.t1 AT2G19060 31.022 274 162 9 1 267 27 280 1.08e-30 117
MS.gene017201.t1 AT1G75920 31.985 272 141 6 3 268 28 261 1.52e-30 116
MS.gene017201.t1 AT2G04020 37.073 205 116 5 3 205 42 235 1.54e-30 116
MS.gene017201.t1 AT5G40990 30.970 268 171 6 4 266 37 295 1.75e-30 117
MS.gene017201.t1 AT3G14225 29.368 269 176 6 4 267 37 296 1.97e-30 117
MS.gene017201.t1 AT5G42170 29.304 273 179 6 2 270 48 310 1.99e-30 117
MS.gene017201.t1 AT3G14225 29.151 271 178 6 4 267 37 300 3.13e-30 117
MS.gene017201.t1 AT2G19050 32.171 258 153 9 2 253 29 270 4.13e-30 115
MS.gene017201.t1 AT1G58520 31.852 270 168 7 2 266 28 286 9.30e-30 115
MS.gene017201.t1 AT1G58525 31.852 270 168 7 2 266 28 286 9.30e-30 115
MS.gene017201.t1 AT3G43550 31.481 270 169 7 2 266 28 286 1.69e-29 113
MS.gene017201.t1 AT1G59406 31.387 274 172 7 2 270 28 290 3.91e-29 113
MS.gene017201.t1 AT1G59030 31.387 274 172 7 2 270 28 290 3.91e-29 113
MS.gene017201.t1 AT1G58725 31.387 274 172 7 2 270 28 290 3.91e-29 113
MS.gene017201.t1 AT2G19010 31.008 258 154 9 3 253 29 269 1.66e-28 111
MS.gene017201.t1 AT2G19010 31.660 259 151 11 3 253 59 299 2.70e-28 111
MS.gene017201.t1 AT1G75920 33.065 248 152 6 28 268 24 264 7.00e-28 109
MS.gene017201.t1 AT1G54030 27.376 263 166 5 5 265 53 292 2.36e-27 107
MS.gene017201.t1 AT1G54030 27.376 263 166 5 5 265 53 292 9.63e-27 107
MS.gene017201.t1 AT5G15720 29.464 224 143 4 56 270 48 265 4.07e-25 102
MS.gene017201.t1 AT3G43570 29.259 270 154 7 2 270 28 261 6.55e-25 101
MS.gene017201.t1 AT1G71691 28.638 213 147 4 60 268 1 212 5.86e-24 98.2
MS.gene017201.t1 AT1G23500 30.882 272 169 8 2 266 33 292 2.93e-22 94.7
MS.gene017201.t1 AT1G28640 28.671 286 164 11 4 266 35 303 1.47e-20 90.5
MS.gene017201.t1 AT1G28650 27.660 282 172 8 4 266 37 305 2.57e-20 89.7
MS.gene017201.t1 AT3G14220 28.102 274 166 11 3 268 31 281 9.06e-20 87.8
MS.gene017201.t1 AT1G54010 28.137 263 158 8 2 255 32 272 2.48e-19 87.0
MS.gene017201.t1 AT1G54000 27.099 262 160 7 2 255 34 272 2.60e-19 87.0
MS.gene017201.t1 AT1G54020 26.277 274 174 8 2 270 29 279 3.68e-19 86.3
MS.gene017201.t1 AT5G14450 28.179 291 160 13 3 266 40 308 5.87e-19 85.9
MS.gene017201.t1 AT1G56670 27.143 280 167 9 3 266 39 297 1.17e-18 84.0
MS.gene017201.t1 AT1G56670 27.143 280 167 9 3 266 39 297 2.54e-18 84.0
MS.gene017201.t1 AT1G54790 27.402 281 171 9 3 266 31 295 2.73e-18 84.0
MS.gene017201.t1 AT2G27360 27.778 288 167 14 4 267 33 303 4.02e-18 83.6
MS.gene017201.t1 AT1G28610 28.125 288 162 11 4 266 31 298 9.52e-18 82.4
MS.gene017201.t1 AT3G62280 27.500 280 164 10 3 266 35 291 1.29e-17 81.3
MS.gene017201.t1 AT1G67830 28.920 287 163 15 3 267 29 296 1.48e-17 81.6
MS.gene017201.t1 AT3G14210 27.308 260 158 8 4 255 36 272 2.13e-17 81.6
MS.gene017201.t1 AT3G62280 27.305 282 166 10 3 268 35 293 2.63e-17 80.9
MS.gene017201.t1 AT3G27950 28.986 276 171 10 3 266 31 293 4.30e-17 80.5
MS.gene017201.t1 AT4G16220 45.833 96 42 4 2 96 28 114 4.44e-17 79.0
MS.gene017201.t1 AT1G28670 27.368 285 170 10 4 266 35 304 5.05e-17 80.5
MS.gene017201.t1 AT1G31550 28.374 289 160 11 4 266 36 303 7.52e-17 80.1
MS.gene017201.t1 AT1G28580 26.923 286 169 10 4 266 37 305 1.01e-16 79.7
MS.gene017201.t1 AT1G28570 27.208 283 172 9 4 266 34 302 1.37e-16 79.3
MS.gene017201.t1 AT3G26430 28.125 288 162 13 3 266 30 296 4.13e-16 77.8
MS.gene017201.t1 AT3G48460 26.545 275 183 9 5 268 39 305 4.94e-16 77.4
MS.gene017201.t1 AT1G09390 26.619 278 171 10 3 266 36 294 1.10e-15 76.3
MS.gene017201.t1 AT1G28660 26.923 286 169 10 4 266 35 303 1.35e-15 76.3
MS.gene017201.t1 AT1G31550 28.070 285 158 11 4 262 36 299 3.08e-15 75.1
MS.gene017201.t1 AT3G05180 24.555 281 179 8 3 266 35 299 4.62e-15 74.7
MS.gene017201.t1 AT1G28660 27.875 287 164 11 4 266 35 302 8.85e-15 73.9
MS.gene017201.t1 AT4G01130 23.404 282 182 8 4 267 34 299 4.35e-14 72.0
MS.gene017201.t1 AT3G09930 25.097 259 172 9 5 261 40 278 5.35e-14 71.2
MS.gene017201.t1 AT3G09930 25.097 259 172 9 5 261 40 278 5.35e-14 71.2
MS.gene017201.t1 AT4G01130 25.000 276 183 9 4 266 34 298 7.68e-14 70.9
MS.gene017201.t1 AT1G54790 25.175 286 171 9 3 266 30 294 2.00e-13 70.1
MS.gene017201.t1 AT1G54790 25.175 286 171 9 3 266 30 294 2.45e-13 69.7
MS.gene017201.t1 AT1G28600 26.132 287 169 11 4 266 31 298 1.54e-12 67.4

Find 57 sgRNAs with CRISPR-Local

Find 153 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGATGTTGTCCTGTGTTC+AGG 0.282522 5.3:+74590430 MS.gene017201:CDS
TTGGGTTGCAGGTGAGAAAT+TGG 0.290039 5.3:+74588814 MS.gene017201:intron
AATAATGCATCCTTCATAAA+TGG 0.293758 5.3:+74588893 MS.gene017201:CDS
TTGCAGCGATTATATGATAA+TGG 0.318724 5.3:+74590372 MS.gene017201:intron
ATATTGAACAGACCAGTAAT+TGG 0.357855 5.3:-74590484 None:intergenic
TTTGTTACCCTTTGATACTA+AGG 0.379822 5.3:-74588864 None:intergenic
ATTGGTAGCAATGATCTCTT+TGG 0.383872 5.3:+74589663 MS.gene017201:CDS
TTTCTCAATCACAAACCAAC+TGG 0.385339 5.3:+74587721 MS.gene017201:CDS
AGCTTTGCTTCCGCAGGTGC+TGG 0.399043 5.3:+74588920 MS.gene017201:CDS
TGCAGGTGAGAAATTGGGTT+TGG 0.401633 5.3:+74588820 MS.gene017201:intron
GGACGTAAATTTGAGATTGC+TGG 0.415575 5.3:+74590396 MS.gene017201:CDS
TGGGTTGCAGGTGAGAAATT+GGG 0.416860 5.3:+74588815 MS.gene017201:intron
GCAGGTGCTGGAATATTTGA+TGG 0.421210 5.3:+74588932 MS.gene017201:CDS
GTGTTGTAGAAACCAATTAC+TGG 0.423976 5.3:+74590472 MS.gene017201:CDS
AAGGCAAATCATCGTCACTA+TGG 0.429441 5.3:+74587691 MS.gene017201:CDS
CTACTACACAAACGTGTATG+AGG 0.452090 5.3:+74589572 MS.gene017201:CDS
TTTCTACAACACATTCCGTT+TGG 0.473432 5.3:-74590461 None:intergenic
CTCACTCAAGCTCCAACTAC+AGG 0.474512 5.3:+74589752 MS.gene017201:CDS
TGGAATCAACATACTGTTGT+GGG 0.484546 5.3:-74589722 None:intergenic
AGGTCTTCAATCCATGTTGA+AGG 0.507368 5.3:+74590512 MS.gene017201:CDS
AAATTTGAGATTGCTGGAGT+GGG 0.508226 5.3:+74590402 MS.gene017201:CDS
TACCTCTCCTTAGTATCAAA+GGG 0.508304 5.3:+74588857 MS.gene017201:CDS
TTACCTCTCCTTAGTATCAA+AGG 0.511130 5.3:+74588856 MS.gene017201:CDS
GGAGATTCACTAGTAGATGT+TGG 0.512021 5.3:+74587637 MS.gene017201:CDS
ATAGTAATACCGTAGGAAGC+TGG 0.513611 5.3:-74590612 None:intergenic
CCATTGCTAAATCTCCCAGT+TGG 0.516556 5.3:-74587736 None:intergenic
TTCAATCCATGTTGAAGGAA+TGG 0.518615 5.3:+74590517 MS.gene017201:CDS
AAAGCTAACACCATTTATGA+AGG 0.528962 5.3:-74588903 None:intergenic
TACTGTGACATACCTGTAGT+TGG 0.531750 5.3:-74589764 None:intergenic
CTTGTCTCTTTCCATTGCCA+AGG 0.534080 5.3:+74587672 MS.gene017201:CDS
GGTGTTAGCTTTGCTTCCGC+AGG 0.536219 5.3:+74588914 MS.gene017201:CDS
ACGATGATTTGCCTTGGCAA+TGG 0.554902 5.3:-74587683 None:intergenic
TAAATTTGAGATTGCTGGAG+TGG 0.565012 5.3:+74590401 MS.gene017201:CDS
TAGTTCACTTGCTTTGTCAA+CGG 0.568752 5.3:-74589552 None:intergenic
TGAGGAACTAACAAGAGAAG+TGG 0.569647 5.3:+74589590 MS.gene017201:CDS
TTCTCAATCACAAACCAACT+GGG 0.571364 5.3:+74587722 MS.gene017201:CDS
ATGGAATCAACATACTGTTG+TGG 0.572326 5.3:-74589723 None:intergenic
ATCAAATATTCCAGCACCTG+CGG 0.581876 5.3:-74588930 None:intergenic
GAATGGCAATCAGAGAATCA+AGG 0.582456 5.3:+74590534 MS.gene017201:CDS
ATTCAAAATCCAGCTTCCTA+CGG 0.583941 5.3:+74590603 MS.gene017201:CDS
ATAGTGACGATGATTTGCCT+TGG 0.588672 5.3:-74587689 None:intergenic
TGATTGCCATTCCTTCAACA+TGG 0.593201 5.3:-74590523 None:intergenic
ATTTGAGATTGCTGGAGTGG+GGG 0.593947 5.3:+74590404 MS.gene017201:CDS
GTTCAGGCTCAAGAACCAAA+CGG 0.594427 5.3:+74590446 MS.gene017201:CDS
CAGCGATTATATGATAATGG+TGG 0.595995 5.3:+74590375 MS.gene017201:intron
TTTGATACTAAGGAGAGGTA+AGG 0.597356 5.3:-74588854 None:intergenic
AATTTGAGATTGCTGGAGTG+GGG 0.599742 5.3:+74590403 MS.gene017201:CDS
GAGGAACTAACAAGAGAAGT+GGG 0.620148 5.3:+74589591 MS.gene017201:CDS
GATACTAAGGAGAGGTAAGG+TGG 0.623561 5.3:-74588851 None:intergenic
GAGCTTGAGTGAGAAAAGCA+TGG 0.627829 5.3:-74589742 None:intergenic
TGGTCTGTTCAATATAACAA+AGG 0.632213 5.3:+74590492 MS.gene017201:CDS
TACCCTTTGATACTAAGGAG+AGG 0.641459 5.3:-74588859 None:intergenic
TGGTTCTTGAGCCTGAACAC+AGG 0.653267 5.3:-74590441 None:intergenic
CTAAGCGATAGTAATACCGT+AGG 0.681545 5.3:-74590619 None:intergenic
GGAATCAACATACTGTTGTG+GGG 0.696161 5.3:-74589721 None:intergenic
CCAACTGGGAGATTTAGCAA+TGG 0.702849 5.3:+74587736 MS.gene017201:CDS
TTGAATGAGATCGTTCATGG+CGG 0.730479 5.3:-74590586 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCCATTTTTAAAATATAAT+TGG + chr5.3:74589991-74590010 MS.gene017201:intron 10.0%
!! AAAATTGCAAAAAAGAAATA+TGG - chr5.3:74588275-74588294 None:intergenic 15.0%
!! AACATAACAGAATATAATAA+TGG - chr5.3:74590315-74590334 None:intergenic 15.0%
!! CATTCAAAAGAATATAAAAT+TGG - chr5.3:74588982-74589001 None:intergenic 15.0%
!! GAAAATATTAAAGACTATTT+AGG - chr5.3:74589081-74589100 None:intergenic 15.0%
!!! AAAATATGATTTGATGTTTT+TGG - chr5.3:74587966-74587985 None:intergenic 15.0%
!!! AATCATATACAATTTCTTTT+TGG - chr5.3:74588788-74588807 None:intergenic 15.0%
!!! AATTGGATATATATTTTATG+GGG + chr5.3:74588212-74588231 MS.gene017201:intron 15.0%
!!! ATTGTATATGATTAATTTGT+TGG + chr5.3:74588795-74588814 MS.gene017201:intron 15.0%
!!! ATTTCTCTTGTTTTTTATTT+TGG - chr5.3:74588477-74588496 None:intergenic 15.0%
!!! CAATTGGATATATATTTTAT+GGG + chr5.3:74588211-74588230 MS.gene017201:intron 15.0%
!!! CACCAATTATATTTTAAAAA+TGG - chr5.3:74589996-74590015 None:intergenic 15.0%
!!! CTATCATTTTTGTAATATAT+TGG + chr5.3:74587832-74587851 MS.gene017201:intron 15.0%
!!! GAAATATGGTTTTTTTTTTT+TGG - chr5.3:74588261-74588280 None:intergenic 15.0%
!!! TAATAATGACATTTTTTTGA+AGG - chr5.3:74588579-74588598 None:intergenic 15.0%
!!! TCAATTGGATATATATTTTA+TGG + chr5.3:74588210-74588229 MS.gene017201:intron 15.0%
!!! TTGTATATGATTAATTTGTT+GGG + chr5.3:74588796-74588815 MS.gene017201:intron 15.0%
!!! TTTTTTTTGGTTCAAAAATA+TGG - chr5.3:74588248-74588267 None:intergenic 15.0%
!! AATAAAAAACTGTTATTGTG+CGG + chr5.3:74589413-74589432 MS.gene017201:intron 20.0%
!! ACCATTTATATTCTTGTAAT+AGG - chr5.3:74588428-74588447 None:intergenic 20.0%
!! AGTCATTTAACAAAAAAATC+TGG + chr5.3:74588615-74588634 MS.gene017201:intron 20.0%
!! ATAAAAAACAAGAGAAATGA+TGG + chr5.3:74588479-74588498 MS.gene017201:intron 20.0%
!! ATATATAATATCCCAAATAG+AGG + chr5.3:74589272-74589291 MS.gene017201:intron 20.0%
!! TAACATAAGAAAAAGACAAA+TGG - chr5.3:74588716-74588735 None:intergenic 20.0%
!! TCCTATTACAAGAATATAAA+TGG + chr5.3:74588424-74588443 MS.gene017201:intron 20.0%
!! TGAAATTTCAAGCAATAAAT+AGG + chr5.3:74590215-74590234 MS.gene017201:intron 20.0%
!! TGGAAAAAACATAATTACAT+GGG + chr5.3:74588345-74588364 MS.gene017201:intron 20.0%
!!! AAAATCTGGTTATTTTATTG+AGG + chr5.3:74588629-74588648 MS.gene017201:intron 20.0%
!!! AATAATCAACACATGAATTT+TGG - chr5.3:74587864-74587883 None:intergenic 20.0%
!!! ACATCAAATCATATTTTCTA+TGG + chr5.3:74587969-74587988 MS.gene017201:intron 20.0%
!!! TAGTTATATAGTTTTTCCTT+AGG + chr5.3:74589860-74589879 MS.gene017201:intron 20.0%
!!! TGTCTTTTTCTTATGTTAAT+CGG + chr5.3:74588718-74588737 MS.gene017201:intron 20.0%
!!! TTTCTTTAATTTTTTTGTGC+TGG - chr5.3:74589394-74589413 None:intergenic 20.0%
! AAAAGACAAATGGAATGAAT+TGG - chr5.3:74588706-74588725 None:intergenic 25.0%
! AAATGAGTAGATTAATTAGC+AGG - chr5.3:74588101-74588120 None:intergenic 25.0%
! AATAATGCATCCTTCATAAA+TGG + chr5.3:74588893-74588912 MS.gene017201:CDS 25.0%
! CTGATATACACACATATTAT+TGG - chr5.3:74588138-74588157 None:intergenic 25.0%
! GAATTAGTAATTACATGTGT+CGG - chr5.3:74589974-74589993 None:intergenic 25.0%
! GTGGAAAAAACATAATTACA+TGG + chr5.3:74588344-74588363 MS.gene017201:intron 25.0%
! TAACAGAATATAATAATGGC+TGG - chr5.3:74590311-74590330 None:intergenic 25.0%
! TTCATAACCACATTTATCAA+TGG + chr5.3:74590255-74590274 MS.gene017201:intron 25.0%
!! AAATGATTAGAATTCGAGTT+AGG - chr5.3:74589009-74589028 None:intergenic 25.0%
!! ATTTAGGATATTATTCGTCA+TGG - chr5.3:74589065-74589084 None:intergenic 25.0%
!!! AAAAATGCTGCTGATTTTAT+TGG + chr5.3:74587760-74587779 MS.gene017201:CDS 25.0%
!!! AAAAGTAGTGCATTTTAACA+AGG + chr5.3:74589825-74589844 MS.gene017201:intron 25.0%
!!! ATATTTCTAGTCGAAAATAC+AGG - chr5.3:74588002-74588021 None:intergenic 25.0%
AAAGCTAACACCATTTATGA+AGG - chr5.3:74588906-74588925 None:intergenic 30.0%
ATAATATCCCAAATAGAGGT+GGG + chr5.3:74589276-74589295 MS.gene017201:intron 30.0%
ATATTGAACAGACCAGTAAT+TGG - chr5.3:74590487-74590506 None:intergenic 30.0%
ATTCTGTTATGTTTGCTTAG+AGG + chr5.3:74590322-74590341 MS.gene017201:intron 30.0%
ATTTATCAATGGCGTACATA+TGG + chr5.3:74590266-74590285 MS.gene017201:intron 30.0%
TATAATATCCCAAATAGAGG+TGG + chr5.3:74589275-74589294 MS.gene017201:intron 30.0%
TATTAAGACGTGTATGACAA+CGG - chr5.3:74589934-74589953 None:intergenic 30.0%
TGGTCTGTTCAATATAACAA+AGG + chr5.3:74590492-74590511 MS.gene017201:CDS 30.0%
TTAAGTGTAACAACAACCTA+AGG - chr5.3:74589879-74589898 None:intergenic 30.0%
TTAGATGAAAATGTTGTGTG+TGG - chr5.3:74590158-74590177 None:intergenic 30.0%
TTATTTATGTGTACGTCACA+AGG + chr5.3:74590076-74590095 MS.gene017201:intron 30.0%
TTGCAGCGATTATATGATAA+TGG + chr5.3:74590372-74590391 MS.gene017201:intron 30.0%
TTTGTTACCCTTTGATACTA+AGG - chr5.3:74588867-74588886 None:intergenic 30.0%
! AAGTTGGACTATTTTGTGAT+TGG - chr5.3:74590116-74590135 None:intergenic 30.0%
! ATTTTGAATGAGATCGTTCA+TGG - chr5.3:74590592-74590611 None:intergenic 30.0%
! CACTTTAGCAGATTTAAAGT+TGG - chr5.3:74590132-74590151 None:intergenic 30.0%
! GTTGTTGTTACACTTAAGTA+CGG + chr5.3:74589882-74589901 MS.gene017201:intron 30.0%
!! CTGGTTATTTTATTGAGGTA+TGG + chr5.3:74588634-74588653 MS.gene017201:intron 30.0%
!!! TCAATTTTTGCTGTTGTGAT+TGG + chr5.3:74589645-74589664 MS.gene017201:CDS 30.0%
AAAGTAATATGCGCGTCAAT+TGG + chr5.3:74588195-74588214 MS.gene017201:intron 35.0%
AATGGCTGGTAAATGAGATA+TGG - chr5.3:74590297-74590316 None:intergenic 35.0%
AGATTGTTGTCTATCTCTAG+AGG + chr5.3:74589330-74589349 MS.gene017201:intron 35.0%
ATGCATGCATGTACTTATAG+AGG - chr5.3:74588509-74588528 None:intergenic 35.0%
ATGGAATCAACATACTGTTG+TGG - chr5.3:74589726-74589745 None:intergenic 35.0%
ATGTACGCCATTGATAAATG+TGG - chr5.3:74590265-74590284 None:intergenic 35.0%
ATTCAAAATCCAGCTTCCTA+CGG + chr5.3:74590603-74590622 MS.gene017201:CDS 35.0%
CAAATCAAAGTCGATCACAT+GGG - chr5.3:74588313-74588332 None:intergenic 35.0%
GAGTAGATTAATTAGCAGGT+TGG - chr5.3:74588097-74588116 None:intergenic 35.0%
GATCACATGGGTTTATTTGA+AGG - chr5.3:74588301-74588320 None:intergenic 35.0%
GATCCATGTCACTACTATAA+GGG - chr5.3:74589363-74589382 None:intergenic 35.0%
GTCTTGCAAACCTAACTTAT+GGG - chr5.3:74589302-74589321 None:intergenic 35.0%
GTGTTGTAGAAACCAATTAC+TGG + chr5.3:74590472-74590491 MS.gene017201:CDS 35.0%
TACCTCTCCTTAGTATCAAA+GGG + chr5.3:74588857-74588876 MS.gene017201:CDS 35.0%
TAGTTCACTTGCTTTGTCAA+CGG - chr5.3:74589555-74589574 None:intergenic 35.0%
TCTCCAAAAACATAAACAGC+AGG - chr5.3:74587622-74587641 None:intergenic 35.0%
TGATCCATGTCACTACTATA+AGG - chr5.3:74589364-74589383 None:intergenic 35.0%
TGGAATCAACATACTGTTGT+GGG - chr5.3:74589725-74589744 None:intergenic 35.0%
TGTCTTGCAAACCTAACTTA+TGG - chr5.3:74589303-74589322 None:intergenic 35.0%
TTACCTCTCCTTAGTATCAA+AGG + chr5.3:74588856-74588875 MS.gene017201:CDS 35.0%
TTCAATCCATGTTGAAGGAA+TGG + chr5.3:74590517-74590536 MS.gene017201:CDS 35.0%
TTCTCAATCACAAACCAACT+GGG + chr5.3:74587722-74587741 MS.gene017201:CDS 35.0%
TTTAGATGCATATCACCAAG+CGG - chr5.3:74589503-74589522 None:intergenic 35.0%
TTTCTACAACACATTCCGTT+TGG - chr5.3:74590464-74590483 None:intergenic 35.0%
TTTCTCAATCACAAACCAAC+TGG + chr5.3:74587721-74587740 MS.gene017201:CDS 35.0%
TTTGATACTAAGGAGAGGTA+AGG - chr5.3:74588857-74588876 None:intergenic 35.0%
! AAATTTGAGATTGCTGGAGT+GGG + chr5.3:74590402-74590421 MS.gene017201:CDS 35.0%
! ATTGGTAGCAATGATCTCTT+TGG + chr5.3:74589663-74589682 MS.gene017201:CDS 35.0%
! TAAATTTGAGATTGCTGGAG+TGG + chr5.3:74590401-74590420 MS.gene017201:CDS 35.0%
! TTTTGTGATTGGTGCATGTT+AGG - chr5.3:74590105-74590124 None:intergenic 35.0%
!! CAGCGATTATATGATAATGG+TGG + chr5.3:74590375-74590394 MS.gene017201:intron 35.0%
!! GTTCCTGCTGTTTATGTTTT+TGG + chr5.3:74587616-74587635 MS.gene017201:CDS 35.0%
!! TGATTAATTTGTTGGGTTGC+AGG + chr5.3:74588803-74588822 MS.gene017201:intron 35.0%
AAGGCAAATCATCGTCACTA+TGG + chr5.3:74587691-74587710 MS.gene017201:CDS 40.0%
ACATGGGATGCAGAAATAGA+TGG + chr5.3:74588361-74588380 MS.gene017201:intron 40.0%
AGGTCTTCAATCCATGTTGA+AGG + chr5.3:74590512-74590531 MS.gene017201:CDS 40.0%
ATAGTAATACCGTAGGAAGC+TGG - chr5.3:74590615-74590634 None:intergenic 40.0%
ATCAAATATTCCAGCACCTG+CGG - chr5.3:74588933-74588952 None:intergenic 40.0%
CCAAATCAAAGTCGATCACA+TGG - chr5.3:74588314-74588333 None:intergenic 40.0%
CTAAGCGATAGTAATACCGT+AGG - chr5.3:74590622-74590641 None:intergenic 40.0%
CTACTACACAAACGTGTATG+AGG + chr5.3:74589572-74589591 MS.gene017201:CDS 40.0%
GAATGGCAATCAGAGAATCA+AGG + chr5.3:74590534-74590553 MS.gene017201:CDS 40.0%
GAGGAACTAACAAGAGAAGT+GGG + chr5.3:74589591-74589610 MS.gene017201:CDS 40.0%
GGAATCAACATACTGTTGTG+GGG - chr5.3:74589724-74589743 None:intergenic 40.0%
GGAGATTCACTAGTAGATGT+TGG + chr5.3:74587637-74587656 MS.gene017201:CDS 40.0%
TACCCTTTGATACTAAGGAG+AGG - chr5.3:74588862-74588881 None:intergenic 40.0%
TACTGTGACATACCTGTAGT+TGG - chr5.3:74589767-74589786 None:intergenic 40.0%
TGAGGAACTAACAAGAGAAG+TGG + chr5.3:74589590-74589609 MS.gene017201:CDS 40.0%
TGATTGCCATTCCTTCAACA+TGG - chr5.3:74590526-74590545 None:intergenic 40.0%
TTAGATGCATATCACCAAGC+GGG - chr5.3:74589502-74589521 None:intergenic 40.0%
TTGAATGAGATCGTTCATGG+CGG - chr5.3:74590589-74590608 None:intergenic 40.0%
! AATTTGAGATTGCTGGAGTG+GGG + chr5.3:74590403-74590422 MS.gene017201:CDS 40.0%
! ATAGTGACGATGATTTGCCT+TGG - chr5.3:74587692-74587711 None:intergenic 40.0%
! CCATGTGATCGACTTTGATT+TGG + chr5.3:74588311-74588330 MS.gene017201:intron 40.0%
! GGACGTAAATTTGAGATTGC+TGG + chr5.3:74590396-74590415 MS.gene017201:CDS 40.0%
! TGTCTATCTCTAGAGGATGT+GGG + chr5.3:74589337-74589356 MS.gene017201:intron 40.0%
! TTGTCTATCTCTAGAGGATG+TGG + chr5.3:74589336-74589355 MS.gene017201:intron 40.0%
!! TTGATTTGGTGAACTGAGAG+TGG + chr5.3:74588325-74588344 MS.gene017201:intron 40.0%
ACACACACGAAGATTGGACA+AGG - chr5.3:74590033-74590052 None:intergenic 45.0%
ACACAGACACACACGAAGAT+TGG - chr5.3:74590039-74590058 None:intergenic 45.0%
CCAACTGGGAGATTTAGCAA+TGG + chr5.3:74587736-74587755 MS.gene017201:CDS 45.0%
CCATTGCTAAATCTCCCAGT+TGG - chr5.3:74587739-74587758 None:intergenic 45.0%
CTTGTCTCTTTCCATTGCCA+AGG + chr5.3:74587672-74587691 MS.gene017201:CDS 45.0%
GAGCTTGAGTGAGAAAAGCA+TGG - chr5.3:74589745-74589764 None:intergenic 45.0%
GATACTAAGGAGAGGTAAGG+TGG - chr5.3:74588854-74588873 None:intergenic 45.0%
GTTCAGGCTCAAGAACCAAA+CGG + chr5.3:74590446-74590465 MS.gene017201:CDS 45.0%
TAGATGCATATCACCAAGCG+GGG - chr5.3:74589501-74589520 None:intergenic 45.0%
TGCAGGTGAGAAATTGGGTT+TGG + chr5.3:74588820-74588839 MS.gene017201:intron 45.0%
TGGGTTGCAGGTGAGAAATT+GGG + chr5.3:74588815-74588834 MS.gene017201:intron 45.0%
TTATGGGCCCACCTCTATTT+GGG - chr5.3:74589286-74589305 None:intergenic 45.0%
TTGGATGTTGTCCTGTGTTC+AGG + chr5.3:74590430-74590449 MS.gene017201:CDS 45.0%
! ACGATGATTTGCCTTGGCAA+TGG - chr5.3:74587686-74587705 None:intergenic 45.0%
! ATTTGAGATTGCTGGAGTGG+GGG + chr5.3:74590404-74590423 MS.gene017201:CDS 45.0%
! TTGGGTTGCAGGTGAGAAAT+TGG + chr5.3:74588814-74588833 MS.gene017201:intron 45.0%
!! GCAGGTGCTGGAATATTTGA+TGG + chr5.3:74588932-74588951 MS.gene017201:CDS 45.0%
CTCACTCAAGCTCCAACTAC+AGG + chr5.3:74589752-74589771 MS.gene017201:CDS 50.0%
CTTATGGGCCCACCTCTATT+TGG - chr5.3:74589287-74589306 None:intergenic 50.0%
GCGTCAGACTGAAGATCTGA+AGG - chr5.3:74589461-74589480 None:intergenic 50.0%
GGGCCCTTATAGTAGTGACA+TGG + chr5.3:74589357-74589376 MS.gene017201:intron 50.0%
TAGAGGTGGGCCCATAAGTT+AGG + chr5.3:74589289-74589308 MS.gene017201:intron 50.0%
TGGTTCTTGAGCCTGAACAC+AGG - chr5.3:74590444-74590463 None:intergenic 50.0%
CAAGCGGGGATAGCTCAGTT+GGG - chr5.3:74589487-74589506 None:intergenic 55.0%
CTGTTATTGTGCGGTGAGCG+TGG + chr5.3:74589422-74589441 MS.gene017201:intron 55.0%
!! GGTGTTAGCTTTGCTTCCGC+AGG + chr5.3:74588914-74588933 MS.gene017201:CDS 55.0%
AGCTTTGCTTCCGCAGGTGC+TGG + chr5.3:74588920-74588939 MS.gene017201:CDS 60.0%
CCAACTGAGCTATCCCCGCT+TGG + chr5.3:74589485-74589504 MS.gene017201:intron 60.0%
CCAAGCGGGGATAGCTCAGT+TGG - chr5.3:74589488-74589507 None:intergenic 60.0%
!! ATTGCTGGAGTGGGGGCACT+TGG + chr5.3:74590411-74590430 MS.gene017201:CDS 60.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 74587613 74590641 74587613 ID=MS.gene017201
chr5.3 mRNA 74587613 74590641 74587613 ID=MS.gene017201.t1;Parent=MS.gene017201
chr5.3 exon 74587613 74587781 74587613 ID=MS.gene017201.t1.exon1;Parent=MS.gene017201.t1
chr5.3 CDS 74587613 74587781 74587613 ID=cds.MS.gene017201.t1;Parent=MS.gene017201.t1
chr5.3 exon 74588825 74588970 74588825 ID=MS.gene017201.t1.exon2;Parent=MS.gene017201.t1
chr5.3 CDS 74588825 74588970 74588825 ID=cds.MS.gene017201.t1;Parent=MS.gene017201.t1
chr5.3 exon 74589540 74589773 74589540 ID=MS.gene017201.t1.exon3;Parent=MS.gene017201.t1
chr5.3 CDS 74589540 74589773 74589540 ID=cds.MS.gene017201.t1;Parent=MS.gene017201.t1
chr5.3 exon 74590378 74590641 74590378 ID=MS.gene017201.t1.exon4;Parent=MS.gene017201.t1
chr5.3 CDS 74590378 74590641 74590378 ID=cds.MS.gene017201.t1;Parent=MS.gene017201.t1
Gene Sequence

>MS.gene017201

ATGGTTCCTGCTGTTTATGTTTTTGGAGATTCACTAGTAGATGTTGGCAACAACAATTACTTGTCTCTTTCCATTGCCAAGGCAAATCATCGTCACTATGGTGTTGATTTTCTCAATCACAAACCAACTGGGAGATTTAGCAATGGCAAAAATGCTGCTGATTTTATTGGTATGATTCAAAATTCAATTGATTCAACTAACTCTTCAAATATATTACTACTATCATTTTTGTAATATATTGGTATGATCCAAAATTCATGTGTTGATTATTACATATGATATCTTTGATGATAGAAATCTTTTTTTTTTTTGAAGTAATTGATGATAGCAATCTTGTTATCATTGAAATTCCAAAAACATCAAATCATATTTTCTATGGTCATTAGCCTGTATTTTCGACTAGAAATATTAGTGATCAAATAGCTTAAATATTATTATCTCTGTTTTTATATAGTTTTGAAAATATAAATATTTTCATACTCCAACCTGCTAATTAATCTACTCATTTTAAATTAATAATCACCAATAATATGTGTGTATATCAGATATTATACTTGTTTTTTGAATATTATTCTTTAAAAAAAAGTAATATGCGCGTCAATTGGATATATATTTTATGGGGTCAAAATAATCCATATTTTTGAACCAAAAAAAAAAAACCATATTTCTTTTTTGCAATTTTTTTCCTTCAAATAAACCCATGTGATCGACTTTGATTTGGTGAACTGAGAGTGGAAAAAACATAATTACATGGGATGCAGAAATAGATGGAATTGCTCAACAAACTTGAGAAAACTTTAAAAAGTTTATTTCCTATTACAAGAATATAAATGGTTTTTTTCTTCATAAAACACGATATGACCAAAATAAAAAACAAGAGAAATGATGGCAAGCCTCTATAAGTACATGCATGCATACATACATACATGTAAAGTTCAAGTGTTAATGTCATTATTAACTTTTCCTTCAAAAAAATGTCATTATTAACTTCTGATTATTTTAAGTCATTTAACAAAAAAATCTGGTTATTTTATTGAGGTATGGACACTATAGTAAATTATTATAGACACGTGTATTGACAATAGAGTTTCCAATTCATTCCATTTGTCTTTTTCTTATGTTAATCGGTTCTATTTGTATTTGTCTCAAACGAAAATATATACGATTAAATTCCAAAAAGAAATTGTATATGATTAATTTGTTGGGTTGCAGGTGAGAAATTGGGTTTGGCAACTTCACCACCTTACCTCTCCTTAGTATCAAAGGGTAACAAAAGTGAAAATAATGCATCCTTCATAAATGGTGTTAGCTTTGCTTCCGCAGGTGCTGGAATATTTGATGGTACAGATGAACGCTATGTAAGTCACCAATTTTATATTCTTTTGAATGAAGACCTAACTCGAATTCTAATCATTTTTTTCGATCGAATCTAATATCGATCTAATTTAGCCATGACGAATAATATCCTAAATAGTCTTTAATATTTTCATTTTTTTTTGACAAATAACATTTTCATTTTTGTTTTTGTAAATTAGTTTTTATGTTATAATAAGTCAGAGTAACTTAGATCATGAGAAAATTATGAAAGACTAAATTGAATTTTTGATATTTTTTTTTGCAGTAGCAAATTTCATTTTAATTTTCATATTTTTTGTGCTTATATATAATATCCCAAATAGAGGTGGGCCCATAAGTTAGGTTTGCAAGACAAAGTCAAAGATTGTTGTCTATCTCTAGAGGATGTGGGCCCTTATAGTAGTGACATGGATCACTTTACGCCAGCACAAAAAAATTAAAGAAAATAAAAAACTGTTATTGTGCGGTGAGCGTGGATCGAACACGCGACCTTCAGATCTTCAGTCTGACGCTCTCCCAACTGAGCTATCCCCGCTTGGTGATATGCATCTAAATCATTTCTGTTTTGTAGAGACAATCGTTGCCGTTGACAAAGCAAGTGAACTACTACACAAACGTGTATGAGGAACTAACAAGAGAAGTGGGAGCAAGTGCTTTACAGAAACATCTCTCAAAATCAATTTTTGCTGTTGTGATTGGTAGCAATGATCTCTTTGGATATTTTGAGTCATCTGAACTTCGTAAGAAAAATACCCCACAACAGTATGTTGATTCCATGCTTTTCTCACTCAAGCTCCAACTACAGGTATGTCACAGTAACTCAGCATTATGTTAATTATTTAGTTTCATTGTATGCAAAAGTAGTGCATTTTAACAAGGAACATTTACTTTTAGTTATATAGTTTTTCCTTAGGTTGTTGTTACACTTAAGTACGGACTAGTACTTCAAATTAAAAGTGTGTCCGTTGTCATACACGTCTTAATATCAAGACTAACACGATACCGACACATGTAATTACTAATTCCATTTTTAAAATATAATTGGTGTCGACATATTATTGCCTTGTCCAATCTTCGTGTGTGTCTGTGTAGTTGATTCATATATTGTTATTTATGTGTACGTCACAAGGATGCCTAACATGCACCAATCACAAAATAGTCCAACTTTAAATCTGCTAAAGTGATTCCACACACAACATTTTCATCTAAAATTTAAAATATAAAGTATATTCATTCTCATCAAATATGAAATTTCAAGCAATAAATAGGCTATTACTGTATTTCGATTCATAACCACATTTATCAATGGCGTACATATGGTTGAACCATATCTCATTTACCAGCCATTATTATATTCTGTTATGTTTGCTTAGAGGATACATTCTTATTTATGTTTTTAATTTTTGCAGCGATTATATGATAATGGTGGACGTAAATTTGAGATTGCTGGAGTGGGGGCACTTGGATGTTGTCCTGTGTTCAGGCTCAAGAACCAAACGGAATGTGTTGTAGAAACCAATTACTGGTCTGTTCAATATAACAAAGGTCTTCAATCCATGTTGAAGGAATGGCAATCAGAGAATCAAGGCATAATGTACTCTTACTTTGACACTTACGCCGCCATGAACGATCTCATTCAAAATCCAGCTTCCTACGGTATTACTATCGCTTAG
Protein sequence

>MS.gene017201.t1

MVPAVYVFGDSLVDVGNNNYLSLSIAKANHRHYGVDFLNHKPTGRFSNGKNAADFIGEKLGLATSPPYLSLVSKGNKSENNASFINGVSFASAGAGIFDGTDERYRQSLPLTKQVNYYTNVYEELTREVGASALQKHLSKSIFAVVIGSNDLFGYFESSELRKKNTPQQYVDSMLFSLKLQLQRLYDNGGRKFEIAGVGALGCCPVFRLKNQTECVVETNYWSVQYNKGLQSMLKEWQSENQGIMYSYFDTYAAMNDLIQNPASYGITIA