AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene061725


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene061725.t1 MTR_4g108690 97.283 368 10 0 1 368 1 368 0.0 738
MS.gene061725.t1 MTR_3g435540 79.348 368 71 2 1 368 1 363 0.0 608
MS.gene061725.t1 MTR_5g078210 46.707 334 176 2 8 341 6 337 1.61e-108 322
MS.gene061725.t1 MTR_5g078210 47.500 280 146 1 8 287 6 284 1.88e-88 270
MS.gene061725.t1 MTR_2g033920 44.201 319 169 7 28 341 36 350 1.41e-82 256
MS.gene061725.t1 MTR_4g122200 45.141 319 166 6 28 341 36 350 1.02e-81 254
MS.gene061725.t1 MTR_2g033930 43.987 316 170 5 29 341 34 345 1.99e-81 253
MS.gene061725.t1 MTR_4g035353 40.385 312 180 5 29 337 33 341 1.60e-80 251
MS.gene061725.t1 MTR_8g079050 40.683 322 180 8 29 341 39 358 4.21e-77 242
MS.gene061725.t1 MTR_3g098270 38.608 316 187 5 29 339 36 349 1.36e-74 236
MS.gene061725.t1 MTR_3g005650 37.764 331 200 4 7 337 11 335 1.54e-73 233
MS.gene061725.t1 MTR_5g084750 37.243 341 205 8 7 343 11 346 4.44e-70 223
MS.gene061725.t1 MTR_1g079540 34.821 336 215 4 8 341 12 345 1.65e-68 220
MS.gene061725.t1 MTR_1g024890 36.254 331 205 5 15 341 18 346 3.63e-68 219
MS.gene061725.t1 MTR_8g087890 37.283 346 202 9 1 337 1 340 4.04e-68 219
MS.gene061725.t1 MTR_7g116510 36.578 339 208 5 9 342 5 341 6.24e-68 218
MS.gene061725.t1 MTR_7g116520 35.799 338 213 4 7 342 14 349 1.28e-67 218
MS.gene061725.t1 MTR_0565s0010 34.524 336 208 8 6 336 13 341 1.96e-67 217
MS.gene061725.t1 MTR_7g116570 36.508 315 196 4 29 341 36 348 3.82e-66 214
MS.gene061725.t1 MTR_4g019880 35.942 345 214 6 1 341 7 348 1.01e-65 213
MS.gene061725.t1 MTR_3g024510 36.218 312 192 5 29 337 40 347 1.04e-65 213
MS.gene061725.t1 MTR_3g052480 33.645 321 198 7 29 340 35 349 1.53e-65 212
MS.gene061725.t1 MTR_5g084770 37.304 319 191 7 30 343 31 345 5.33e-65 210
MS.gene061725.t1 MTR_1g069175 35.484 341 212 7 6 342 14 350 7.86e-65 210
MS.gene061725.t1 MTR_7g116500 36.825 315 195 4 29 341 35 347 1.48e-64 209
MS.gene061725.t1 MTR_3g052490 31.563 339 224 4 7 340 12 347 8.02e-63 205
MS.gene061725.t1 MTR_5g093090 31.507 365 230 6 1 357 1 353 9.57e-62 202
MS.gene061725.t1 MTR_3g464730 33.718 347 223 6 1 343 2 345 3.54e-61 200
MS.gene061725.t1 MTR_1g079530 36.152 343 207 6 1 341 5 337 1.14e-60 199
MS.gene061725.t1 MTR_2g033920 43.346 263 141 6 29 287 37 295 7.57e-60 196
MS.gene061725.t1 MTR_3g082830 35.331 317 197 7 30 342 41 353 1.15e-59 197
MS.gene061725.t1 MTR_6g021530 34.783 345 215 7 3 341 4 344 2.89e-59 196
MS.gene061725.t1 MTR_3g052580 29.070 344 237 4 1 340 2 342 3.42e-58 194
MS.gene061725.t1 MTR_3g052580 29.070 344 237 4 1 340 1 341 5.61e-58 194
MS.gene061725.t1 MTR_3g005660 39.623 318 177 12 29 337 38 349 7.20e-58 192
MS.gene061725.t1 MTR_5g009100 33.119 311 204 3 29 337 48 356 1.28e-57 192
MS.gene061725.t1 MTR_2g084585 33.754 317 202 6 29 341 32 344 5.21e-56 187
MS.gene061725.t1 MTR_1g025760 32.288 319 210 5 29 344 82 397 1.02e-55 187
MS.gene061725.t1 MTR_1g025720 32.609 322 210 6 29 347 39 356 2.48e-55 185
MS.gene061725.t1 MTR_7g008060 32.743 339 210 6 6 341 11 334 1.41e-54 183
MS.gene061725.t1 MTR_5g084790 31.818 352 225 10 1 342 1 347 3.84e-54 182
MS.gene061725.t1 MTR_8g014910 33.623 345 213 10 6 341 10 347 4.32e-54 182
MS.gene061725.t1 MTR_8g075220 31.875 320 209 6 31 343 44 361 5.89e-53 179
MS.gene061725.t1 MTR_3g023220 38.585 311 174 9 29 337 35 330 1.02e-52 178
MS.gene061725.t1 MTR_1g025780 32.177 317 207 6 31 344 45 356 3.32e-52 177
MS.gene061725.t1 MTR_8g074560 31.014 345 222 6 29 366 33 368 5.97e-52 177
MS.gene061725.t1 MTR_2g017875 37.658 316 176 11 29 337 36 337 6.60e-52 176
MS.gene061725.t1 MTR_8g075230 32.288 319 208 7 29 343 38 352 9.17e-52 176
MS.gene061725.t1 MTR_5g074270 33.233 331 205 9 30 349 36 361 2.08e-51 175
MS.gene061725.t1 MTR_3g114090 31.661 319 212 5 29 344 38 353 2.35e-51 175
MS.gene061725.t1 MTR_8g074570 32.817 323 199 8 29 341 40 354 3.13e-51 175
MS.gene061725.t1 MTR_2g461580 32.258 341 209 8 5 338 5 330 4.97e-51 174
MS.gene061725.t1 MTR_2g017965 38.871 319 169 11 29 337 35 337 9.45e-51 174
MS.gene061725.t1 MTR_8g075200 31.546 317 209 7 31 343 45 357 1.68e-50 174
MS.gene061725.t1 MTR_0009s0250 33.333 345 204 10 1 337 6 332 1.76e-50 172
MS.gene061725.t1 MTR_2g017925 38.245 319 166 12 29 337 35 332 2.10e-50 173
MS.gene061725.t1 MTR_5g022630 32.797 311 201 7 31 336 47 354 2.33e-50 172
MS.gene061725.t1 MTR_2g044100 33.230 322 197 7 29 340 45 358 3.72e-50 173
MS.gene061725.t1 MTR_3g114120 31.975 319 209 7 31 345 51 365 7.17e-50 171
MS.gene061725.t1 MTR_3g021460 34.395 314 186 8 29 338 33 330 1.93e-49 170
MS.gene061725.t1 MTR_1g025700 31.348 319 212 6 29 344 52 366 2.18e-49 170
MS.gene061725.t1 MTR_8g022810 31.909 351 216 9 3 340 15 355 2.26e-49 170
MS.gene061725.t1 MTR_2g017955 34.211 380 222 14 1 364 1 368 2.33e-49 170
MS.gene061725.t1 MTR_4g056160 34.062 320 200 7 29 341 29 344 3.82e-49 169
MS.gene061725.t1 MTR_4g056280 32.915 319 202 7 29 341 32 344 6.52e-49 169
MS.gene061725.t1 MTR_8g087870 35.093 322 174 10 29 338 31 329 1.37e-48 167
MS.gene061725.t1 MTR_2g100620 34.385 317 197 9 31 341 35 346 1.80e-48 167
MS.gene061725.t1 MTR_1g025680 31.776 321 209 6 29 344 36 351 2.96e-48 169
MS.gene061725.t1 MTR_5g022640 31.546 317 208 8 30 341 46 358 3.85e-46 161
MS.gene061725.t1 MTR_4g087985 31.143 350 221 11 7 341 15 359 4.84e-45 159
MS.gene061725.t1 MTR_8g031390 30.218 321 201 7 26 337 36 342 1.52e-43 155
MS.gene061725.t1 MTR_2g015080 28.696 345 227 10 3 332 12 352 4.48e-43 154
MS.gene061725.t1 MTR_8g031400 29.907 321 203 7 26 337 36 343 1.12e-42 152
MS.gene061725.t1 MTR_8g031430 29.012 324 208 7 26 340 36 346 1.14e-42 152
MS.gene061725.t1 MTR_5g093090 32.203 295 187 5 1 287 1 290 1.54e-42 150
MS.gene061725.t1 MTR_8g031420 29.874 318 201 7 29 337 37 341 3.27e-42 151
MS.gene061725.t1 MTR_5g083040 30.368 326 200 7 29 338 34 348 5.68e-42 150
MS.gene061725.t1 MTR_8g022790 32.268 313 196 7 29 337 39 339 1.10e-41 149
MS.gene061725.t1 MTR_0127s0040 33.636 220 141 5 127 342 4 222 1.86e-41 145
MS.gene061725.t1 MTR_8g074580 29.722 360 194 11 29 337 46 397 2.70e-41 150
MS.gene061725.t1 MTR_2g017915 35.312 320 163 11 29 340 35 318 3.34e-41 148
MS.gene061725.t1 MTR_1g025910 28.280 343 222 7 32 363 41 370 6.15e-41 148
MS.gene061725.t1 MTR_1g079590 36.765 204 126 3 3 205 7 208 2.25e-36 131
MS.gene061725.t1 MTR_8g031390 29.371 286 184 6 26 307 36 307 5.54e-36 133
MS.gene061725.t1 MTR_8g022810 27.221 349 182 9 3 340 15 302 1.00e-32 125
MS.gene061725.t1 MTR_5g087690 25.552 317 214 7 29 337 52 354 1.44e-31 123
MS.gene061725.t1 MTR_1108s0010 33.333 216 123 6 132 341 3 203 6.13e-31 117
MS.gene061725.t1 MTR_7g033150 25.248 404 223 13 6 361 9 381 1.97e-30 120
MS.gene061725.t1 MTR_1g030340 28.108 370 210 15 6 340 23 371 1.15e-29 118
MS.gene061725.t1 MTR_2g018015 38.579 197 114 6 29 222 38 230 4.55e-29 114
MS.gene061725.t1 MTR_5g093090 36.066 183 106 3 29 204 30 208 2.81e-28 110
MS.gene061725.t1 MTR_2g017925 33.937 221 119 8 127 337 26 229 3.14e-28 111
MS.gene061725.t1 MTR_7g111780 28.739 341 203 11 21 341 29 349 3.34e-27 110
MS.gene061725.t1 MTR_8g089805 25.858 379 222 13 4 344 18 375 5.20e-27 110
MS.gene061725.t1 MTR_7g033155 25.193 389 221 13 6 341 12 383 6.62e-27 110
MS.gene061725.t1 MTR_2g015580 28.011 357 225 14 7 341 27 373 2.60e-26 108
MS.gene061725.t1 MTR_7g116870 24.586 362 233 11 6 341 13 360 8.03e-25 104
MS.gene061725.t1 MTR_6g007100 26.970 330 204 10 31 342 37 347 2.88e-24 102
MS.gene061725.t1 MTR_1g060490 26.220 328 204 12 29 343 39 341 3.00e-24 102
MS.gene061725.t1 MTR_4g104240 27.164 335 209 12 29 342 41 361 4.38e-24 102
MS.gene061725.t1 MTR_7g087190 25.723 346 210 12 29 341 45 376 4.48e-24 102
MS.gene061725.t1 MTR_3g463960 25.882 340 213 13 29 342 46 372 4.58e-24 102
MS.gene061725.t1 MTR_3g463950 25.882 340 213 13 29 342 46 372 4.58e-24 102
MS.gene061725.t1 MTR_3g463970 25.882 340 213 13 29 342 46 372 4.58e-24 102
MS.gene061725.t1 MTR_3g463940 25.882 340 213 13 29 342 46 372 4.58e-24 102
MS.gene061725.t1 MTR_2g087292 26.316 342 167 10 1 339 6 265 5.56e-24 100
MS.gene061725.t1 MTR_2g015590 25.886 367 237 13 7 347 13 370 1.21e-23 100
MS.gene061725.t1 MTR_5g074210 33.333 174 104 4 190 351 46 219 1.38e-23 97.8
MS.gene061725.t1 MTR_7g113860 26.738 374 217 14 7 341 10 365 1.13e-22 98.6
MS.gene061725.t1 MTR_1g030220 27.479 353 202 15 22 340 36 368 1.54e-22 98.2
MS.gene061725.t1 MTR_3g448360 27.147 361 213 14 29 362 31 368 4.05e-22 96.7
MS.gene061725.t1 MTR_3g463930 26.087 345 213 14 29 342 46 379 4.79e-22 96.7
MS.gene061725.t1 MTR_3g438030 28.177 362 211 15 29 363 32 371 4.87e-22 96.3
MS.gene061725.t1 MTR_2g043980 27.451 357 202 15 29 362 36 358 7.74e-22 95.9
MS.gene061725.t1 MTR_7g113860 26.901 342 208 12 29 341 31 359 1.22e-21 95.5
MS.gene061725.t1 MTR_7g033165 26.879 346 199 11 31 341 37 363 1.36e-21 95.5
MS.gene061725.t1 MTR_2g015630 29.940 334 202 15 32 342 36 360 1.68e-21 95.1
MS.gene061725.t1 MTR_2g015650 28.144 334 210 13 29 341 33 357 1.81e-21 94.7
MS.gene061725.t1 MTR_1g060500 25.749 334 206 11 29 343 42 352 2.31e-21 94.4
MS.gene061725.t1 MTR_1g030275 24.333 300 195 7 67 341 74 366 3.21e-21 94.4
MS.gene061725.t1 MTR_7g104220 25.466 322 209 11 29 340 44 344 5.00e-21 93.2
MS.gene061725.t1 MTR_3g069780 27.901 362 212 15 29 363 32 371 6.53e-21 93.2
MS.gene061725.t1 MTR_2g079090 26.048 334 205 13 29 342 32 343 9.07e-21 92.8
MS.gene061725.t1 MTR_1g092690 25.714 315 199 10 29 332 53 343 1.64e-20 92.0
MS.gene061725.t1 MTR_7g111780 27.559 254 161 6 102 341 6 250 1.85e-20 90.1
MS.gene061725.t1 MTR_6g007090 27.083 336 205 14 31 341 43 363 2.22e-20 91.7
MS.gene061725.t1 MTR_1g082390 24.611 386 224 14 1 343 1 362 7.45e-20 90.1
MS.gene061725.t1 MTR_1g030230 25.676 370 232 15 1 340 4 360 8.23e-20 90.1
MS.gene061725.t1 MTR_1g030268 26.158 367 231 14 1 340 13 366 9.52e-20 90.1
MS.gene061725.t1 MTR_0029s0050 26.048 334 205 13 29 342 32 343 1.10e-19 89.7
MS.gene061725.t1 MTR_0029s0100 26.048 334 205 13 29 342 32 343 1.16e-19 89.4
MS.gene061725.t1 MTR_6g007095 25.952 289 188 6 67 341 405 681 1.76e-19 90.5
MS.gene061725.t1 MTR_6g007095 26.100 341 202 11 31 341 45 365 1.13e-18 88.2
MS.gene061725.t1 MTR_2g079080 25.449 334 207 13 29 342 32 343 2.85e-19 88.2
MS.gene061725.t1 MTR_1g092740 24.684 316 202 11 29 332 40 331 8.89e-19 86.7
MS.gene061725.t1 MTR_4g036385 36.449 107 67 1 236 341 22 128 2.75e-18 80.9
MS.gene061725.t1 MTR_2g015670 26.727 333 202 14 29 341 33 343 1.20e-17 83.6
MS.gene061725.t1 MTR_5g084880 39.000 100 59 1 190 287 13 112 1.78e-17 79.0
MS.gene061725.t1 MTR_1g092750 25.904 332 205 9 29 345 42 347 3.44e-17 82.4
MS.gene061725.t1 MTR_8g089805 23.723 274 169 8 104 344 41 307 4.49e-17 81.6
MS.gene061725.t1 MTR_4g036375 33.108 148 97 2 29 176 32 177 6.22e-17 78.6
MS.gene061725.t1 MTR_1g092760 27.619 315 194 11 29 332 41 332 6.49e-17 81.3
MS.gene061725.t1 MTR_8g038680 24.118 340 215 9 31 341 32 357 1.57e-16 80.5
MS.gene061725.t1 MTR_6g049230 36.090 133 78 3 195 322 64 194 1.67e-16 77.4
MS.gene061725.t1 MTR_2g017895 26.971 241 145 7 102 337 29 243 7.51e-16 77.0
MS.gene061725.t1 MTR_4g056220 35.238 105 67 1 238 341 77 181 1.37e-15 75.1
MS.gene061725.t1 MTR_7g113860 24.483 290 169 9 81 341 23 291 3.07e-15 75.9
MS.gene061725.t1 MTR_1g079570 27.500 120 86 1 223 341 4 123 3.27e-14 69.7
MS.gene061725.t1 MTR_3g069520 25.414 362 219 15 29 363 32 369 4.44e-14 73.2
MS.gene061725.t1 MTR_1g030268 26.948 308 197 11 1 292 13 308 6.90e-14 72.4
MS.gene061725.t1 MTR_1g030265 22.917 288 188 9 80 340 53 333 8.83e-13 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene061725.t1 AT1G74460 67.838 370 112 3 1 368 1 365 0.0 525
MS.gene061725.t1 AT5G37690 45.161 341 185 2 1 341 1 339 2.97e-107 319
MS.gene061725.t1 AT5G37690 43.402 341 183 3 1 341 1 331 1.32e-99 299
MS.gene061725.t1 AT3G50400 41.615 322 178 7 29 341 36 356 1.84e-79 248
MS.gene061725.t1 AT5G08460 40.823 316 179 5 28 337 50 363 8.24e-77 242
MS.gene061725.t1 AT5G15720 41.745 321 177 6 29 343 32 348 1.82e-76 240
MS.gene061725.t1 AT2G23540 39.564 321 185 6 29 341 50 369 1.54e-75 239
MS.gene061725.t1 AT1G71250 36.950 341 203 6 8 339 16 353 1.42e-73 233
MS.gene061725.t1 AT5G41890 36.207 348 193 10 27 357 31 366 1.58e-70 225
MS.gene061725.t1 AT4G28780 37.168 339 205 4 9 341 9 345 3.18e-70 224
MS.gene061725.t1 AT1G71691 39.103 312 184 4 29 339 57 363 5.23e-70 224
MS.gene061725.t1 AT1G29660 37.982 337 198 8 7 337 10 341 8.94e-68 218
MS.gene061725.t1 AT1G33811 39.308 318 180 8 29 337 36 349 1.12e-66 215
MS.gene061725.t1 AT1G29670 35.882 340 207 8 4 337 6 340 2.84e-66 214
MS.gene061725.t1 AT3G04290 37.143 315 194 4 29 341 31 343 3.90e-66 214
MS.gene061725.t1 AT1G29670 35.777 341 208 8 3 337 73 408 3.57e-65 213
MS.gene061725.t1 AT5G33370 35.238 315 200 4 29 341 32 344 1.74e-62 204
MS.gene061725.t1 AT5G45670 34.211 342 217 7 6 343 8 345 6.27e-62 202
MS.gene061725.t1 AT4G18970 34.169 319 202 6 29 343 30 344 7.97e-62 202
MS.gene061725.t1 AT5G18430 35.647 317 198 5 29 341 30 344 3.73e-61 201
MS.gene061725.t1 AT4G18970 34.169 319 202 6 29 343 30 344 7.03e-61 201
MS.gene061725.t1 AT5G15720 39.114 271 158 4 79 343 48 317 4.93e-60 197
MS.gene061725.t1 AT4G10950 32.484 314 208 3 29 340 73 384 3.55e-59 197
MS.gene061725.t1 AT2G04570 33.235 340 217 8 6 341 9 342 4.28e-58 192
MS.gene061725.t1 AT3G14820 35.737 319 193 8 30 344 35 345 1.17e-57 191
MS.gene061725.t1 AT4G26790 35.061 328 203 8 20 342 22 344 2.22e-57 191
MS.gene061725.t1 AT4G26790 35.061 328 203 8 20 342 22 344 2.22e-57 191
MS.gene061725.t1 AT2G42990 34.118 340 213 9 10 343 10 344 6.36e-57 189
MS.gene061725.t1 AT5G42170 33.333 318 201 7 31 344 54 364 1.27e-56 189
MS.gene061725.t1 AT4G10950 32.484 314 204 4 29 340 73 380 4.58e-56 189
MS.gene061725.t1 AT1G71691 35.361 263 166 2 78 339 3 262 1.30e-55 184
MS.gene061725.t1 AT5G55050 34.421 337 204 8 18 341 26 358 1.31e-55 187
MS.gene061725.t1 AT1G58430 33.438 320 205 6 29 343 37 353 3.01e-55 185
MS.gene061725.t1 AT5G15720 41.132 265 146 6 29 287 32 292 1.74e-54 182
MS.gene061725.t1 AT2G30220 32.063 315 206 6 29 338 35 346 2.47e-54 183
MS.gene061725.t1 AT1G75890 32.602 319 208 6 30 344 50 365 3.09e-54 183
MS.gene061725.t1 AT1G75890 32.602 319 208 6 30 344 79 394 6.15e-54 183
MS.gene061725.t1 AT1G75890 32.326 331 206 8 30 344 50 378 1.08e-53 182
MS.gene061725.t1 AT2G19060 34.062 320 177 13 29 336 32 329 1.99e-52 177
MS.gene061725.t1 AT2G30310 31.013 316 208 7 29 338 36 347 6.31e-52 176
MS.gene061725.t1 AT2G31540 31.962 316 207 6 30 340 38 350 1.39e-51 176
MS.gene061725.t1 AT1G59406 32.288 319 205 6 30 344 33 344 4.45e-51 174
MS.gene061725.t1 AT1G59030 32.288 319 205 6 30 344 33 344 4.45e-51 174
MS.gene061725.t1 AT1G58725 32.288 319 205 6 30 344 33 344 4.45e-51 174
MS.gene061725.t1 AT1G71691 39.231 260 152 4 29 287 57 311 1.39e-50 172
MS.gene061725.t1 AT1G20120 31.562 320 207 8 29 342 80 393 3.12e-50 173
MS.gene061725.t1 AT5G03810 31.034 348 230 8 1 343 5 347 6.04e-50 171
MS.gene061725.t1 AT4G16230 41.593 226 126 4 5 228 9 230 1.37e-49 167
MS.gene061725.t1 AT5G22810 33.642 324 196 10 29 341 36 351 2.08e-49 170
MS.gene061725.t1 AT1G75880 31.975 319 210 6 30 344 55 370 2.29e-49 170
MS.gene061725.t1 AT3G16370 34.049 326 203 10 31 350 34 353 3.15e-49 169
MS.gene061725.t1 AT2G24560 31.013 316 210 6 30 340 37 349 3.72e-49 169
MS.gene061725.t1 AT2G19010 34.494 316 181 11 29 337 32 328 4.25e-49 169
MS.gene061725.t1 AT1G75900 32.500 320 203 8 31 344 47 359 1.01e-48 168
MS.gene061725.t1 AT5G45950 32.166 314 205 7 29 341 42 348 1.13e-48 168
MS.gene061725.t1 AT2G19010 34.494 316 181 11 29 337 62 358 1.78e-48 168
MS.gene061725.t1 AT1G75880 32.288 319 208 7 30 344 55 369 3.14e-48 167
MS.gene061725.t1 AT1G06990 29.296 355 227 9 8 343 5 354 2.56e-47 164
MS.gene061725.t1 AT2G19050 34.185 313 186 11 29 337 33 329 3.03e-47 164
MS.gene061725.t1 AT1G58520 31.975 319 199 7 30 344 33 337 4.83e-47 163
MS.gene061725.t1 AT1G58525 31.975 319 199 7 30 344 33 337 4.83e-47 163
MS.gene061725.t1 AT2G40250 31.692 325 208 6 29 344 38 357 7.42e-47 163
MS.gene061725.t1 AT5G03820 32.471 348 218 11 1 341 12 349 1.34e-46 162
MS.gene061725.t1 AT5G45960 31.661 319 204 8 23 332 43 356 3.05e-46 162
MS.gene061725.t1 AT5G03820 32.471 348 218 11 1 341 40 377 3.73e-46 162
MS.gene061725.t1 AT2G03980 32.808 317 195 8 29 337 45 351 9.87e-46 160
MS.gene061725.t1 AT2G03980 32.808 317 195 8 29 337 45 351 9.87e-46 160
MS.gene061725.t1 AT2G03980 32.808 317 195 8 29 337 45 351 9.87e-46 160
MS.gene061725.t1 AT2G03980 32.808 317 195 8 29 337 45 351 9.87e-46 160
MS.gene061725.t1 AT1G71120 30.408 319 203 8 29 340 33 339 9.99e-46 160
MS.gene061725.t1 AT3G53100 32.075 318 208 7 30 343 32 345 3.79e-45 159
MS.gene061725.t1 AT5G33370 34.483 261 167 4 29 287 32 290 4.11e-45 158
MS.gene061725.t1 AT4G30140 33.861 316 183 12 29 338 35 330 8.02e-45 157
MS.gene061725.t1 AT1G20132 31.481 324 206 9 29 344 63 378 1.58e-44 158
MS.gene061725.t1 AT1G53920 29.560 318 208 7 29 338 50 359 1.66e-43 155
MS.gene061725.t1 AT3G43570 29.747 316 188 7 30 344 33 315 6.49e-43 152
MS.gene061725.t1 AT3G14225 30.864 324 205 7 29 341 39 354 4.67e-42 151
MS.gene061725.t1 AT3G14225 30.982 326 206 7 29 341 39 358 7.70e-42 150
MS.gene061725.t1 AT1G20135 29.641 334 219 7 5 336 7 326 2.37e-41 148
MS.gene061725.t1 AT1G73610 31.861 317 199 7 29 343 37 338 6.69e-40 144
MS.gene061725.t1 AT5G40990 29.752 363 224 11 1 341 1 354 1.39e-39 144
MS.gene061725.t1 AT5G63170 30.606 330 207 10 7 332 10 321 1.56e-39 143
MS.gene061725.t1 AT1G20130 30.395 329 210 10 29 344 186 508 2.50e-39 146
MS.gene061725.t1 AT1G20130 30.395 329 210 10 29 344 206 528 3.35e-39 146
MS.gene061725.t1 AT1G53990 29.096 354 218 9 6 341 7 345 6.54e-38 140
MS.gene061725.t1 AT2G19050 35.887 248 145 8 29 273 33 269 2.94e-37 136
MS.gene061725.t1 AT1G75920 28.349 321 204 7 31 342 33 336 6.11e-37 137
MS.gene061725.t1 AT1G53940 29.012 324 211 7 29 341 41 356 1.05e-36 137
MS.gene061725.t1 AT2G24560 31.295 278 181 7 29 301 36 308 1.13e-36 135
MS.gene061725.t1 AT1G23500 31.385 325 189 10 29 342 37 338 7.87e-36 134
MS.gene061725.t1 AT3G43550 31.418 261 169 5 30 287 33 286 2.63e-34 128
MS.gene061725.t1 AT1G75920 27.381 336 203 8 31 342 28 346 6.54e-34 129
MS.gene061725.t1 AT1G75930 29.938 324 197 12 29 341 31 335 1.19e-32 125
MS.gene061725.t1 AT1G75920 27.365 296 190 6 56 342 29 308 1.23e-32 124
MS.gene061725.t1 AT1G54030 27.832 309 194 11 29 333 54 337 8.92e-32 124
MS.gene061725.t1 AT2G31550 29.524 210 143 3 135 340 1 209 1.17e-30 116
MS.gene061725.t1 AT1G75910 26.266 316 218 5 31 342 32 336 1.48e-30 119
MS.gene061725.t1 AT2G04020 36.683 199 116 4 29 225 45 235 1.90e-28 112
MS.gene061725.t1 AT2G04020 36.683 199 116 4 29 225 45 235 2.86e-28 113
MS.gene061725.t1 AT3G14220 29.688 320 198 12 27 338 32 332 7.78e-28 112
MS.gene061725.t1 AT1G75920 25.857 321 181 8 31 342 33 305 4.78e-27 109
MS.gene061725.t1 AT3G14210 27.964 329 200 13 26 340 35 340 2.20e-26 108
MS.gene061725.t1 AT1G53940 28.409 264 177 5 29 287 41 297 5.15e-26 106
MS.gene061725.t1 AT1G28580 29.080 337 200 13 31 341 41 364 1.46e-25 106
MS.gene061725.t1 AT1G09390 26.513 347 205 11 21 341 31 353 2.86e-25 105
MS.gene061725.t1 AT3G05180 28.161 348 196 12 29 341 38 366 3.96e-25 105
MS.gene061725.t1 AT2G27360 26.331 357 231 11 9 341 13 361 4.17e-25 105
MS.gene061725.t1 AT3G27950 27.297 370 225 12 1 341 1 355 8.04e-25 104
MS.gene061725.t1 AT1G54020 24.713 348 232 11 1 338 1 328 1.23e-24 103
MS.gene061725.t1 AT3G48460 25.298 336 214 12 29 341 40 361 2.29e-24 103
MS.gene061725.t1 AT5G14450 25.613 367 233 11 3 341 17 371 4.66e-24 102
MS.gene061725.t1 AT1G54790 25.613 367 225 14 9 341 10 362 8.23e-24 101
MS.gene061725.t1 AT1G54010 25.000 348 223 12 3 341 21 339 8.35e-24 101
MS.gene061725.t1 AT1G54030 27.734 256 158 9 29 280 54 286 1.12e-23 100
MS.gene061725.t1 AT1G31550 27.647 340 202 11 31 342 40 363 1.35e-23 101
MS.gene061725.t1 AT4G16233 40.187 107 63 1 236 341 6 112 1.21e-22 92.8
MS.gene061725.t1 AT1G54000 23.256 344 238 9 6 341 14 339 1.67e-22 98.2
MS.gene061725.t1 AT3G62280 26.364 330 205 11 31 341 40 350 1.75e-22 97.8
MS.gene061725.t1 AT1G67830 26.420 352 210 12 22 340 26 361 3.17e-22 97.1
MS.gene061725.t1 AT4G01130 25.201 373 229 14 2 341 10 365 4.21e-22 96.7
MS.gene061725.t1 AT1G28570 27.168 346 215 13 22 342 29 362 5.69e-22 96.7
MS.gene061725.t1 AT1G56670 23.784 370 227 12 3 341 11 356 8.81e-22 95.9
MS.gene061725.t1 AT1G28590 26.301 365 231 14 5 342 11 364 9.26e-22 96.3
MS.gene061725.t1 AT5G03610 24.920 313 205 9 29 330 45 338 1.42e-21 95.1
MS.gene061725.t1 AT3G26430 26.074 349 202 12 29 340 33 362 2.91e-21 94.4
MS.gene061725.t1 AT1G28610 26.590 346 216 13 23 342 25 358 4.04e-21 94.0
MS.gene061725.t1 AT1G54790 25.568 352 200 13 29 341 33 361 6.66e-21 93.6
MS.gene061725.t1 AT1G28650 25.691 362 230 13 7 341 15 364 1.55e-20 92.4
MS.gene061725.t1 AT1G28660 24.863 366 234 13 4 341 10 362 2.11e-20 92.0
MS.gene061725.t1 AT1G28660 24.863 366 233 14 4 341 10 361 3.71e-20 91.3
MS.gene061725.t1 AT1G28600 25.439 342 205 12 31 341 35 357 7.73e-20 90.5
MS.gene061725.t1 AT1G31550 26.765 340 202 12 31 342 40 360 1.81e-19 89.4
MS.gene061725.t1 AT1G28640 23.483 379 246 14 4 356 10 370 2.86e-19 88.6
MS.gene061725.t1 AT5G45910 29.825 342 200 17 29 341 32 362 3.24e-19 88.6
MS.gene061725.t1 AT3G09930 24.847 326 214 8 29 342 41 347 6.12e-19 87.4
MS.gene061725.t1 AT3G09930 24.847 326 214 8 29 342 41 347 6.12e-19 87.4
MS.gene061725.t1 AT1G28670 23.352 364 243 12 4 341 10 363 6.03e-18 84.7
MS.gene061725.t1 AT4G16220 39.130 138 80 3 5 142 9 142 1.36e-17 81.6
MS.gene061725.t1 AT1G54020 22.692 260 179 8 83 338 1 242 1.21e-15 77.0
MS.gene061725.t1 AT1G54020 22.692 260 179 8 83 338 1 242 1.21e-15 77.0
MS.gene061725.t1 AT1G54020 22.692 260 179 8 83 338 1 242 1.21e-15 77.0
MS.gene061725.t1 AT4G01130 25.246 305 193 11 2 287 10 298 1.47e-14 74.3
MS.gene061725.t1 AT1G54020 22.995 187 139 3 155 338 9 193 1.55e-14 72.8
MS.gene061725.t1 AT3G14210 28.571 196 126 7 155 340 21 212 6.66e-14 71.6
MS.gene061725.t1 AT1G28580 26.502 283 172 11 83 341 13 283 3.79e-13 69.7
MS.gene061725.t1 AT4G01130 23.431 239 145 8 126 341 56 279 8.68e-13 68.6
MS.gene061725.t1 AT1G56670 23.473 311 188 10 3 287 11 297 5.80e-12 66.2
MS.gene061725.t1 AT3G62280 25.830 271 168 10 31 287 40 291 2.53e-11 64.3

Find 78 sgRNAs with CRISPR-Local

Find 154 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGAACTTATTAAGAAATT+TGG 0.099606 8.1:-16655888 MS.gene061725:CDS
TATTATAGTAGCCATCATTT+TGG 0.216688 8.1:-16658420 MS.gene061725:CDS
TTAGAAGCAAAATTGGAAAA+AGG 0.224651 8.1:-16657139 MS.gene061725:CDS
CCAAATCTATAATTTGAATT+AGG 0.231906 8.1:+16656646 None:intergenic
GACTCACCCTGCTGTTCCTT+TGG 0.240923 8.1:-16656026 MS.gene061725:CDS
ATCTTGAATGATTAATCTTC+TGG 0.245177 8.1:+16655804 None:intergenic
GAACTAATTAGAAGCAAAAT+TGG 0.258541 8.1:-16657146 MS.gene061725:CDS
ACAGAAGCAAATATGTGTTT+TGG 0.275454 8.1:-16655953 MS.gene061725:CDS
GCTCAATATGTTGTTGCTTT+AGG 0.276115 8.1:-16657092 MS.gene061725:CDS
CCTAATTCAAATTATAGATT+TGG 0.286715 8.1:-16656646 MS.gene061725:CDS
GAGAAAGATATACTAATAAA+TGG 0.293441 8.1:-16657367 MS.gene061725:CDS
AAGGTTGTGCAATTCATATT+TGG 0.300714 8.1:-16658371 MS.gene061725:CDS
AAAGTTGACACTCACAAAAT+AGG 0.330676 8.1:+16657297 None:intergenic
TGCCTCTTTACACTGATTCA+TGG 0.338743 8.1:-16657040 MS.gene061725:CDS
ACTCACCCTGCTGTTCCTTT+GGG 0.347351 8.1:-16656025 MS.gene061725:CDS
ACCTTCATGGATTACTTGAT+AGG 0.372440 8.1:-16657002 MS.gene061725:CDS
AGCAGGGTGAGTCTGAGTTT+TGG 0.389980 8.1:+16656036 None:intergenic
CGCACAGTTGCTGATATAAT+AGG 0.392444 8.1:-16658227 MS.gene061725:intron
CATATTTGGAGACTCTCTTT+CGG 0.399756 8.1:-16658357 MS.gene061725:CDS
AATGGATTGAACTATGCTTC+TGG 0.403982 8.1:-16657349 MS.gene061725:CDS
AATTAACATGGAGTTTAGTA+AGG 0.407205 8.1:-16658450 None:intergenic
CCATTAGAGAACCTTCCATT+AGG 0.426371 8.1:+16658251 None:intergenic
ATGGTATAGACATGGGTAAT+GGG 0.431513 8.1:-16658277 MS.gene061725:CDS
TCGTGAAAATGTAAACAAAC+TGG 0.438483 8.1:-16656725 MS.gene061725:CDS
CAAAGGGTACTTACTACAAC+CGG 0.438934 8.1:-16656754 MS.gene061725:CDS
AACTATGCTTCTGGTGGTGG+TGG 0.441301 8.1:-16657340 MS.gene061725:CDS
ATACAATGATGAAACCTTCA+TGG 0.447803 8.1:-16657015 MS.gene061725:CDS
AAACAAATTGAGTTGTTTCA+AGG 0.447844 8.1:-16657176 MS.gene061725:CDS
GGAGACTCTCTTTCGGATGT+TGG 0.448034 8.1:-16658350 MS.gene061725:CDS
TTGAACTATGCTTCTGGTGG+TGG 0.451607 8.1:-16657343 MS.gene061725:CDS
ATCTACTTACCGTACTTAAG+TGG 0.453809 8.1:+16656586 None:intergenic
ATGGGTAATGGGTTACCTAA+TGG 0.453961 8.1:-16658266 MS.gene061725:CDS
GGTGGCATCTTGAATGAAAC+TGG 0.467981 8.1:-16657322 MS.gene061725:CDS
TATGGTATAGACATGGGTAA+TGG 0.488782 8.1:-16658278 MS.gene061725:CDS
CCTAATGGAAGGTTCTCTAA+TGG 0.489722 8.1:-16658251 MS.gene061725:CDS
AATGATTAATCTTCTGGAGA+TGG 0.493565 8.1:+16655810 None:intergenic
AACAAATTGAGTTGTTTCAA+GGG 0.493665 8.1:-16657175 MS.gene061725:CDS
AATTCTCCCAAAGGAACAGC+AGG 0.501627 8.1:+16656019 None:intergenic
TAGCTCAGGCAAGCTTGCCT+TGG 0.502282 8.1:-16658301 MS.gene061725:CDS
TCTCAGTTAAAGACGTGTCT+AGG 0.504648 8.1:+16657386 None:intergenic
CAGGCAAGCTTGCCTTGGTA+TGG 0.506809 8.1:-16658296 MS.gene061725:CDS
GCTTGAAGGATGCCATTGTA+AGG 0.510195 8.1:-16658390 MS.gene061725:CDS
GTTAAAGACGTGTCTAGGAC+TGG 0.514273 8.1:+16657391 None:intergenic
AACACTAAGAAGACAACTAA+AGG 0.515883 8.1:-16656979 MS.gene061725:intron
TACTTCATAGTTTAGGAGCA+AGG 0.520215 8.1:-16656822 MS.gene061725:CDS
TGGGATGCATTCCACTTCAA+AGG 0.523034 8.1:-16656771 MS.gene061725:CDS
TGAAGTGGAATGCATCCCAT+TGG 0.531878 8.1:+16656775 None:intergenic
ATTAGCAATCCACTTAAGTA+CGG 0.535222 8.1:-16656595 MS.gene061725:intron
AAGCCCAACACCCAAAATGA+TGG 0.536239 8.1:+16658409 None:intergenic
GGAGCAATAGCAGCAGGTGC+TGG 0.537282 8.1:+16655831 None:intergenic
GGGATGCATTCCACTTCAAA+GGG 0.542688 8.1:-16656770 MS.gene061725:CDS
GTCCATGAATCAGTGTAAAG+AGG 0.544547 8.1:+16657038 None:intergenic
TCCTATCAAGTAATCCATGA+AGG 0.551770 8.1:+16657001 None:intergenic
ATAGCAGCAGGTGCTGGTGA+AGG 0.556239 8.1:+16655837 None:intergenic
AAGCGATCTAATAGATGACT+TGG 0.558580 8.1:-16656680 MS.gene061725:CDS
GGAGATGGAGCAATAGCAGC+AGG 0.561892 8.1:+16655825 None:intergenic
TGCTGGTCTAATTCTCCCAA+AGG 0.564566 8.1:+16656010 None:intergenic
TCTCTCTAGAAGCCTAGCTC+AGG 0.570010 8.1:-16658315 MS.gene061725:CDS
GCCTTGGTATGGTATAGACA+TGG 0.570735 8.1:-16658285 MS.gene061725:CDS
GTAGTAAGTACCCTTTGAAG+TGG 0.581219 8.1:+16656760 None:intergenic
GACGTGTCTAGGACTGGAGG+GGG 0.583635 8.1:+16657397 None:intergenic
AAGGCAAGCTTGCCTGAGCT+AGG 0.591810 8.1:+16658303 None:intergenic
TTGGGACGAGTACCATCCCT+CGG 0.595098 8.1:-16655934 MS.gene061725:CDS
CATTAGCACTGTCCGAGGGA+TGG 0.613036 8.1:+16655922 None:intergenic
TCTGAGCATAGTGTTGATGC+AGG 0.615872 8.1:+16655975 None:intergenic
GAGCTCATTAGCACTGTCCG+AGG 0.619794 8.1:+16655917 None:intergenic
AGACGTGTCTAGGACTGGAG+GGG 0.620564 8.1:+16657396 None:intergenic
CCTTGGTATGGTATAGACAT+GGG 0.621837 8.1:-16658284 MS.gene061725:CDS
AAGACGTGTCTAGGACTGGA+GGG 0.634890 8.1:+16657395 None:intergenic
AGCTCATTAGCACTGTCCGA+GGG 0.635773 8.1:+16655918 None:intergenic
TGAATTGCACAACCTTACAA+TGG 0.641191 8.1:+16658378 None:intergenic
GCAGGTACACATGTAAGTGC+TGG 0.643973 8.1:+16655993 None:intergenic
AAAGACGTGTCTAGGACTGG+AGG 0.647081 8.1:+16657394 None:intergenic
GTAATGGGTTACCTAATGGA+AGG 0.648858 8.1:-16658262 MS.gene061725:CDS
GTGACAGTTTAGGCCTACCT+AGG 0.652728 8.1:-16657420 MS.gene061725:CDS
CCCATGTCTATACCATACCA+AGG 0.684296 8.1:+16658284 None:intergenic
ATTCTCCCAAAGGAACAGCA+GGG 0.701343 8.1:+16656020 None:intergenic
GGATTGAACTATGCTTCTGG+TGG 0.704487 8.1:-16657346 MS.gene061725:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTTTTTTTATTTTTTTTTG+AGG - chr8.1:16657362-16657381 MS.gene061725:CDS 10.0%
!!! TTCACTAATATTTATTTTAT+AGG - chr8.1:16658048-16658067 MS.gene061725:intron 10.0%
!! AATGAACTTATTAAGAAATT+TGG - chr8.1:16658370-16658389 MS.gene061725:CDS 15.0%
!! TAAAATAAAGTGATTTATGT+TGG - chr8.1:16656202-16656221 MS.gene061725:intron 15.0%
!!! ATAAAAATAGATTTTTGTCA+TGG + chr8.1:16656141-16656160 None:intergenic 15.0%
!! CCAAATCTATAATTTGAATT+AGG + chr8.1:16657615-16657634 None:intergenic 20.0%
!! CCTAATTCAAATTATAGATT+TGG - chr8.1:16657612-16657631 MS.gene061725:intron 20.0%
!! GAGAAAGATATACTAATAAA+TGG - chr8.1:16656891-16656910 MS.gene061725:intron 20.0%
!! TAGATCCATTAAAGATAATT+TGG + chr8.1:16657842-16657861 None:intergenic 20.0%
!! TTAAATAACACCAATAGTAA+TGG - chr8.1:16658024-16658043 MS.gene061725:intron 20.0%
!! TTTCACCAAATTATCTTTAA+TGG - chr8.1:16657834-16657853 MS.gene061725:intron 20.0%
!!! AATTAAGCATTTGCTATAAT+GGG - chr8.1:16656391-16656410 MS.gene061725:intron 20.0%
!!! ATTGATTATTGATTTGAGAT+CGG - chr8.1:16657795-16657814 MS.gene061725:intron 20.0%
!!! TAATTAAGCATTTGCTATAA+TGG - chr8.1:16656390-16656409 MS.gene061725:intron 20.0%
!!! TAGGTAATTTTTTCACTTAT+TGG - chr8.1:16656050-16656069 MS.gene061725:intron 20.0%
! ATCAATAACCTTAAAAAGTC+AGG + chr8.1:16656739-16656758 None:intergenic 25.0%
! ATTCAGCTACAAAATTATCT+AGG - chr8.1:16658113-16658132 MS.gene061725:intron 25.0%
! CAAAATTCTCTGTCTTAAAA+AGG - chr8.1:16658149-16658168 MS.gene061725:intron 25.0%
! GAACTAATTAGAAGCAAAAT+TGG - chr8.1:16657112-16657131 MS.gene061725:CDS 25.0%
! TAGAAGCAAAATTGGAAAAA+GGG - chr8.1:16657120-16657139 MS.gene061725:CDS 25.0%
! TCAATAACCTTAAAAAGTCA+GGG + chr8.1:16656738-16656757 None:intergenic 25.0%
! TCTAAAAAATCATGATGCAT+GGG + chr8.1:16656454-16656473 None:intergenic 25.0%
! TTAGAAGCAAAATTGGAAAA+AGG - chr8.1:16657119-16657138 MS.gene061725:CDS 25.0%
! TTTAATCACATGCATGTAAT+AGG - chr8.1:16657721-16657740 MS.gene061725:intron 25.0%
!! AAACAAATTGAGTTGTTTCA+AGG - chr8.1:16657082-16657101 MS.gene061725:CDS 25.0%
!! AACAAATTGAGTTGTTTCAA+GGG - chr8.1:16657083-16657102 MS.gene061725:CDS 25.0%
!! ATTATAGTAGCCATCATTTT+GGG - chr8.1:16655839-16655858 MS.gene061725:CDS 25.0%
!! CAAAGATCTTATACATTTTC+AGG - chr8.1:16656816-16656835 MS.gene061725:CDS 25.0%
!! GTAAATACTTGCATTTGTTA+AGG + chr8.1:16657761-16657780 None:intergenic 25.0%
!! GTTTGTCTAGTGATAATTTT+TGG + chr8.1:16657066-16657085 None:intergenic 25.0%
!! TATTATAGTAGCCATCATTT+TGG - chr8.1:16655838-16655857 MS.gene061725:CDS 25.0%
!! TTCTAAAAAATCATGATGCA+TGG + chr8.1:16656455-16656474 None:intergenic 25.0%
!!! ATTAAGCATTTGCTATAATG+GGG - chr8.1:16656392-16656411 MS.gene061725:intron 25.0%
!!! TTTTAGCTACTTCATAGTTT+AGG - chr8.1:16657429-16657448 MS.gene061725:intron 25.0%
AAAGTTGACACTCACAAAAT+AGG + chr8.1:16656964-16656983 None:intergenic 30.0%
AACACTAAGAAGACAACTAA+AGG - chr8.1:16657279-16657298 MS.gene061725:intron 30.0%
AAGGTTGTGCAATTCATATT+TGG - chr8.1:16655887-16655906 MS.gene061725:CDS 30.0%
ATACAATGATGAAACCTTCA+TGG - chr8.1:16657243-16657262 MS.gene061725:intron 30.0%
ATTAGCAATCCACTTAAGTA+CGG - chr8.1:16657663-16657682 MS.gene061725:intron 30.0%
ATTAGTGAAGCCATTACTAT+TGG + chr8.1:16658037-16658056 None:intergenic 30.0%
CTAATCACATTTGCTTTGTA+GGG - chr8.1:16658197-16658216 MS.gene061725:intron 30.0%
CTAATTTCAAACCTGTTTAC+AGG + chr8.1:16656776-16656795 None:intergenic 30.0%
GACACAATAATACTAGCTAT+CGG + chr8.1:16656345-16656364 None:intergenic 30.0%
GATTTATGTTGGACTTTGTT+TGG - chr8.1:16656213-16656232 MS.gene061725:intron 30.0%
TCGTGAAAATGTAAACAAAC+TGG - chr8.1:16657533-16657552 MS.gene061725:intron 30.0%
! AAATTTGGATTTTCACGTGA+CGG - chr8.1:16658385-16658404 MS.gene061725:CDS 30.0%
! ACAGAAGCAAATATGTGTTT+TGG - chr8.1:16658305-16658324 MS.gene061725:CDS 30.0%
! ACTTTTATACTGTGTGTGTT+AGG - chr8.1:16656979-16656998 MS.gene061725:intron 30.0%
! ATACTTGCATTTGTTAAGGT+AGG + chr8.1:16657757-16657776 None:intergenic 30.0%
! CAGAAGCAAATATGTGTTTT+GGG - chr8.1:16658306-16658325 MS.gene061725:CDS 30.0%
! CTTTTATACTGTGTGTGTTA+GGG - chr8.1:16656980-16656999 MS.gene061725:CDS 30.0%
! GAATTAACCCTGACTTTTTA+AGG - chr8.1:16656728-16656747 MS.gene061725:CDS 30.0%
! TACATTTTCACGACAATTTC+CGG + chr8.1:16657526-16657545 None:intergenic 30.0%
! TACTTGCATTTGTTAAGGTA+GGG + chr8.1:16657756-16657775 None:intergenic 30.0%
!! AAAAGGTGTCACTTAAAAGT+TGG - chr8.1:16658166-16658185 MS.gene061725:intron 30.0%
!! GAGAATTTTGACACTTTTTG+AGG + chr8.1:16658139-16658158 None:intergenic 30.0%
!! GTTTTAGGCGCAAATATTTT+TGG - chr8.1:16657985-16658004 MS.gene061725:intron 30.0%
!! TGTGTAGCTTTAATCTACAT+TGG - chr8.1:16656482-16656501 MS.gene061725:intron 30.0%
AAGATAGTAAGCGTGTGTAT+AGG + chr8.1:16656645-16656664 None:intergenic 35.0%
AAGCGATCTAATAGATGACT+TGG - chr8.1:16657578-16657597 MS.gene061725:intron 35.0%
AAGTGTCAATAGCATGGATT+TGG + chr8.1:16657922-16657941 None:intergenic 35.0%
ATCTACTTACCGTACTTAAG+TGG + chr8.1:16657675-16657694 None:intergenic 35.0%
ATGGTATAGACATGGGTAAT+GGG - chr8.1:16655981-16656000 MS.gene061725:CDS 35.0%
CATATTTGGAGACTCTCTTT+CGG - chr8.1:16655901-16655920 MS.gene061725:CDS 35.0%
CCTAATCACATTTGCTTTGT+AGG - chr8.1:16658196-16658215 MS.gene061725:intron 35.0%
CCTACAAAGCAAATGTGATT+AGG + chr8.1:16658199-16658218 None:intergenic 35.0%
CTCAAAAGATCATCACATTG+AGG - chr8.1:16656518-16656537 MS.gene061725:intron 35.0%
TACTTCATAGTTTAGGAGCA+AGG - chr8.1:16657436-16657455 MS.gene061725:intron 35.0%
TATGGTATAGACATGGGTAA+TGG - chr8.1:16655980-16655999 MS.gene061725:CDS 35.0%
TCCTATCAAGTAATCCATGA+AGG + chr8.1:16657260-16657279 None:intergenic 35.0%
TGAATTGCACAACCTTACAA+TGG + chr8.1:16655883-16655902 None:intergenic 35.0%
TTGGTTAAGTGTCAATAGCA+TGG + chr8.1:16657928-16657947 None:intergenic 35.0%
TTGTGAATCAACCTGTAAAC+AGG - chr8.1:16656762-16656781 MS.gene061725:CDS 35.0%
! ACCTTCATGGATTACTTGAT+AGG - chr8.1:16657256-16657275 MS.gene061725:intron 35.0%
! GTGACAAAAGCAAGAGTTTT+AGG - chr8.1:16657970-16657989 MS.gene061725:intron 35.0%
!! AATGGATTGAACTATGCTTC+TGG - chr8.1:16656909-16656928 MS.gene061725:intron 35.0%
!! ATTTGCTATAATGGGGTGTT+TGG - chr8.1:16656399-16656418 MS.gene061725:intron 35.0%
!! CAAGGCAATTGATGCTTTTT+GGG - chr8.1:16657454-16657473 MS.gene061725:intron 35.0%
!! GCTCAATATGTTGTTGCTTT+AGG - chr8.1:16657166-16657185 MS.gene061725:CDS 35.0%
!!! ACATTTTCAGGTGACAGTTT+AGG - chr8.1:16656828-16656847 MS.gene061725:intron 35.0%
AAAATTGGAAAAAGGGCTGC+GGG - chr8.1:16657127-16657146 MS.gene061725:CDS 40.0%
ACCAAATGATGCTCATACCA+AGG - chr8.1:16657943-16657962 MS.gene061725:intron 40.0%
CAAAATTGGAAAAAGGGCTG+CGG - chr8.1:16657126-16657145 MS.gene061725:CDS 40.0%
CCAAATGATGCTCATACCAA+GGG - chr8.1:16657944-16657963 MS.gene061725:intron 40.0%
CCATTAGAGAACCTTCCATT+AGG + chr8.1:16656010-16656029 None:intergenic 40.0%
CCTAATGGAAGGTTCTCTAA+TGG - chr8.1:16656007-16656026 MS.gene061725:CDS 40.0%
CCTTGGTATGGTATAGACAT+GGG - chr8.1:16655974-16655993 MS.gene061725:CDS 40.0%
CGCACAGTTGCTGATATAAT+AGG - chr8.1:16656031-16656050 MS.gene061725:CDS 40.0%
GTCCATGAATCAGTGTAAAG+AGG + chr8.1:16657223-16657242 None:intergenic 40.0%
TCTCAGTTAAAGACGTGTCT+AGG + chr8.1:16656875-16656894 None:intergenic 40.0%
TTGAGGGTGAACAATGAGTT+TGG - chr8.1:16656422-16656441 MS.gene061725:intron 40.0%
! ATAATGGGGTGTTTGGTTGA+GGG - chr8.1:16656406-16656425 MS.gene061725:intron 40.0%
! GCAAGGCAATTGATGCTTTT+TGG - chr8.1:16657453-16657472 MS.gene061725:intron 40.0%
! GTAGTAAGTACCCTTTGAAG+TGG + chr8.1:16657501-16657520 None:intergenic 40.0%
! TATAATGGGGTGTTTGGTTG+AGG - chr8.1:16656405-16656424 MS.gene061725:intron 40.0%
! TTTTCACGACAGACATTGAG+CGG - chr8.1:16656599-16656618 MS.gene061725:CDS 40.0%
!! ATGGGTAATGGGTTACCTAA+TGG - chr8.1:16655992-16656011 MS.gene061725:CDS 40.0%
!! CAAAGGGTACTTACTACAAC+CGG - chr8.1:16657504-16657523 MS.gene061725:intron 40.0%
!! CAATTGATGCTTTTTGGGCT+GGG - chr8.1:16657459-16657478 MS.gene061725:intron 40.0%
!! GTAATGGGTTACCTAATGGA+AGG - chr8.1:16655996-16656015 MS.gene061725:CDS 40.0%
!! TAGCCATCATTTTGGGTGTT+GGG - chr8.1:16655846-16655865 MS.gene061725:CDS 40.0%
!! TGCCTCTTTACACTGATTCA+TGG - chr8.1:16657218-16657237 MS.gene061725:intron 40.0%
!! TTGCTTTTGTCACAAACCCT+TGG + chr8.1:16657963-16657982 None:intergenic 40.0%
AAGCCCAACACCCAAAATGA+TGG + chr8.1:16655852-16655871 None:intergenic 45.0%
AATTCTCCCAAAGGAACAGC+AGG + chr8.1:16658242-16658261 None:intergenic 45.0%
ATTCTCCCAAAGGAACAGCA+GGG + chr8.1:16658241-16658260 None:intergenic 45.0%
CCCATGTCTATACCATACCA+AGG + chr8.1:16655977-16655996 None:intergenic 45.0%
CCCTTGGTATGAGCATCATT+TGG + chr8.1:16657947-16657966 None:intergenic 45.0%
GCCTTGGTATGGTATAGACA+TGG - chr8.1:16655973-16655992 MS.gene061725:CDS 45.0%
GCTAGTATTATTGTGTCCCG+AGG - chr8.1:16656348-16656367 MS.gene061725:intron 45.0%
GCTTGAAGGATGCCATTGTA+AGG - chr8.1:16655868-16655887 MS.gene061725:CDS 45.0%
GGATTGAACTATGCTTCTGG+TGG - chr8.1:16656912-16656931 MS.gene061725:intron 45.0%
GGGATGCATTCCACTTCAAA+GGG - chr8.1:16657488-16657507 MS.gene061725:intron 45.0%
GGTGGCATCTTGAATGAAAC+TGG - chr8.1:16656936-16656955 MS.gene061725:intron 45.0%
TATTATTGTGTCCCGAGGCA+CGG - chr8.1:16656353-16656372 MS.gene061725:intron 45.0%
TGAAGTGGAATGCATCCCAT+TGG + chr8.1:16657486-16657505 None:intergenic 45.0%
TGGGATGCATTCCACTTCAA+AGG - chr8.1:16657487-16657506 MS.gene061725:intron 45.0%
TTGAACTATGCTTCTGGTGG+TGG - chr8.1:16656915-16656934 MS.gene061725:intron 45.0%
! GTTAAAGACGTGTCTAGGAC+TGG + chr8.1:16656870-16656889 None:intergenic 45.0%
! TGCTGGTCTAATTCTCCCAA+AGG + chr8.1:16658251-16658270 None:intergenic 45.0%
!! GCAATTGATGCTTTTTGGGC+TGG - chr8.1:16657458-16657477 MS.gene061725:intron 45.0%
!! GTAGCCATCATTTTGGGTGT+TGG - chr8.1:16655845-16655864 MS.gene061725:CDS 45.0%
!! TCTGAGCATAGTGTTGATGC+AGG + chr8.1:16658286-16658305 None:intergenic 45.0%
!!! ATTTTGGGTGTTGGGCTTGA+AGG - chr8.1:16655854-16655873 MS.gene061725:CDS 45.0%
!!! GTTATTTAAAATATAAATTT+CGG + chr8.1:16658013-16658032 None:intergenic 5.0%
!!! TTATTTAAAATATAAATTTC+GGG + chr8.1:16658012-16658031 None:intergenic 5.0%
ACTCACCCTGCTGTTCCTTT+GGG - chr8.1:16658233-16658252 MS.gene061725:CDS 50.0%
AGCTCATTAGCACTGTCCGA+GGG + chr8.1:16658343-16658362 None:intergenic 50.0%
GCAGGTACACATGTAAGTGC+TGG + chr8.1:16658268-16658287 None:intergenic 50.0%
GGAGACTCTCTTTCGGATGT+TGG - chr8.1:16655908-16655927 MS.gene061725:CDS 50.0%
GTGACAGTTTAGGCCTACCT+AGG - chr8.1:16656838-16656857 MS.gene061725:intron 50.0%
! AAAGACGTGTCTAGGACTGG+AGG + chr8.1:16656867-16656886 None:intergenic 50.0%
! AAGACGTGTCTAGGACTGGA+GGG + chr8.1:16656866-16656885 None:intergenic 50.0%
! AGCAGGGTGAGTCTGAGTTT+TGG + chr8.1:16658225-16658244 None:intergenic 50.0%
! TCTCTCTAGAAGCCTAGCTC+AGG - chr8.1:16655943-16655962 MS.gene061725:CDS 50.0%
!! AACTATGCTTCTGGTGGTGG+TGG - chr8.1:16656918-16656937 MS.gene061725:intron 50.0%
!! CTTTTTGGGCTGGGTCCAAT+GGG - chr8.1:16657468-16657487 MS.gene061725:intron 50.0%
AAGGCAAGCTTGCCTGAGCT+AGG + chr8.1:16655958-16655977 None:intergenic 55.0%
CAGGCAAGCTTGCCTTGGTA+TGG - chr8.1:16655962-16655981 MS.gene061725:CDS 55.0%
CATTAGCACTGTCCGAGGGA+TGG + chr8.1:16658339-16658358 None:intergenic 55.0%
CTTCTCAATTGCCGTGCCTC+GGG + chr8.1:16656367-16656386 None:intergenic 55.0%
GACTCACCCTGCTGTTCCTT+TGG - chr8.1:16658232-16658251 MS.gene061725:CDS 55.0%
GAGCTCATTAGCACTGTCCG+AGG + chr8.1:16658344-16658363 None:intergenic 55.0%
GCTTCTCAATTGCCGTGCCT+CGG + chr8.1:16656368-16656387 None:intergenic 55.0%
GGAGATGGAGCAATAGCAGC+AGG + chr8.1:16658436-16658455 None:intergenic 55.0%
TAGCTCAGGCAAGCTTGCCT+TGG - chr8.1:16655957-16655976 MS.gene061725:CDS 55.0%
TTGGGACGAGTACCATCCCT+CGG - chr8.1:16658324-16658343 MS.gene061725:CDS 55.0%
! AGACGTGTCTAGGACTGGAG+GGG + chr8.1:16656865-16656884 None:intergenic 55.0%
!! ATAGCAGCAGGTGCTGGTGA+AGG + chr8.1:16658424-16658443 None:intergenic 55.0%
!! GCTTTTTGGGCTGGGTCCAA+TGG - chr8.1:16657467-16657486 MS.gene061725:intron 55.0%
GGAGCAATAGCAGCAGGTGC+TGG + chr8.1:16658430-16658449 None:intergenic 60.0%
! GACGTGTCTAGGACTGGAGG+GGG + chr8.1:16656864-16656883 None:intergenic 60.0%
! TCTAGGACTGGAGGGGGCCT+AGG + chr8.1:16656858-16656877 None:intergenic 65.0%
GGACTGGAGGGGGCCTAGGT+AGG + chr8.1:16656854-16656873 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 16655815 16658465 16655815 ID=MS.gene061725
chr8.1 mRNA 16655815 16658465 16655815 ID=MS.gene061725.t1;Parent=MS.gene061725
chr8.1 exon 16658228 16658465 16658228 ID=MS.gene061725.t1.exon1;Parent=MS.gene061725.t1
chr8.1 CDS 16658228 16658465 16658228 ID=cds.MS.gene061725.t1;Parent=MS.gene061725.t1
chr8.1 exon 16657312 16657442 16657312 ID=MS.gene061725.t1.exon2;Parent=MS.gene061725.t1
chr8.1 CDS 16657312 16657442 16657312 ID=cds.MS.gene061725.t1;Parent=MS.gene061725.t1
chr8.1 exon 16656980 16657219 16656980 ID=MS.gene061725.t1.exon3;Parent=MS.gene061725.t1
chr8.1 CDS 16656980 16657219 16656980 ID=cds.MS.gene061725.t1;Parent=MS.gene061725.t1
chr8.1 exon 16656596 16656845 16656596 ID=MS.gene061725.t1.exon4;Parent=MS.gene061725.t1
chr8.1 CDS 16656596 16656845 16656596 ID=cds.MS.gene061725.t1;Parent=MS.gene061725.t1
chr8.1 exon 16655815 16656062 16655815 ID=MS.gene061725.t1.exon5;Parent=MS.gene061725.t1
chr8.1 CDS 16655815 16656062 16655815 ID=cds.MS.gene061725.t1;Parent=MS.gene061725.t1
Gene Sequence

>MS.gene061725

ATGGAGTTTAGTAAGGTGATAGTTATTATAGTAGCCATCATTTTGGGTGTTGGGCTTGAAGGATGCCATTGTAAGGTTGTGCAATTCATATTTGGAGACTCTCTTTCGGATGTTGGAAACAACATGCATCTCTCTAGAAGCCTAGCTCAGGCAAGCTTGCCTTGGTATGGTATAGACATGGGTAATGGGTTACCTAATGGAAGGTTCTCTAATGGACGCACAGTTGCTGATATAATAGGTAATTTTTTCACTTATTGGCATTCAAATGCTAGAAACTAAATTATCTCATCTAAAATGCTCTTAGATTTCATTAAGCTCTTATACCATGACAAAAATCTATTTTTATTTAATTAGTTATGTAGAAACGATTTTAGTTAAAAGTGAGTTTAAAATAAAGTGATTTATGTTGGACTTTGTTTGGATATATTTACGTGATAGTACGTTAAATAATAATTGAGTGTAAAAATTACGTTTGAAATAAAAAAAACTACAAATCTTAACTTCAAGTTAGAATAAGTAGTTGTTTACCGATAGCTAGTATTATTGTGTCCCGAGGCACGGCAATTGAGAAGCTATAATTAAGCATTTGCTATAATGGGGTGTTTGGTTGAGGGTGAACAATGAGTTTGGAGCTCTCCCATGCATCATGATTTTTTAGAAGTTACAATGTGTAGCTTTAATCTACATTGGATTATGAGTGAAGCTCAAAAGATCATCACATTGAGGCAATAGCAATATCACACAAGTGAAACTAGACTTCATTTGTGTGACTTCTAACTCAAATTTTTCACGACAGACATTGAGCGGTTGCGAAGAACAAACACTCTCCTATACACACGCTTACTATCTTCAAACACACTTATTGTATAGATGTATTTCAAACATAAAACAACATATATCTTGCTGCAGCAAAGAATTAACCCTGACTTTTTAAGGTTATTGATGTTTTGTGAATCAACCTGTAAACAGGTTTGAAATTAGAGTTTGTCATGACATTATAACAAAGATCTTATACATTTTCAGGTGACAGTTTAGGCCTACCTAGGCCCCCTCCAGTCCTAGACACGTCTTTAACTGAGAAAGATATACTAATAAATGGATTGAACTATGCTTCTGGTGGTGGTGGCATCTTGAATGAAACTGGCACCTATTTTGTGAGTGTCAACTTTTATACTGTGTGTGTTAGGGCATTTAATTTAAGCAATACTGAAATATTTTGCATGATAAAATTATTTCTCTCATGCAGATCCAAAAATTATCACTAGACAAACAAATTGAGTTGTTTCAAGGGACACAAGAACTAATTAGAAGCAAAATTGGAAAAAGGGCTGCGGGCAAATTCTTTAGAGAAGCTCAATATGTTGTTGCTTTAGGTAGCAATGACTTTATCAACAACTACTTGATGCCTCTTTACACTGATTCATGGACATACAATGATGAAACCTTCATGGATTACTTGATAGGAACACTAAGAAGACAACTAAAGGTTTATTGAGTTCACTCTAAAATAATCATGCTTCATTATTTTGCATTTAAGTGTCTTAAGTCTTTTTTTTATTTTTTTTTGAGGAAAGAGTCTTGAGTATAATAATGAGTATTTACATTTGTTTATGTTTTTAGCTACTTCATAGTTTAGGAGCAAGGCAATTGATGCTTTTTGGGCTGGGTCCAATGGGATGCATTCCACTTCAAAGGGTACTTACTACAACCGGAAATTGTCGTGAAAATGTAAACAAACTGGCTCTTAGCTTTAATAAAGCTTCAAGCGATCTAATAGATGACTTGGTTAAGCAACTTCCTAATTCAAATTATAGATTTGGAGATGCATATGATGTTGTCTCTGATTTGATTAGCAATCCACTTAAGTACGGTAAGTAGATACGTTAATTGATAATTTACTTCTCTTTTTAATCACATGCATGTAATAGGATCTAGATTCCCTACCTTAACAAATGCAAGTATTTACTCATATTAACTGATATTGATTATTGATTTGAGATCGGTTGATTCAAATTACATTTTCACCAAATTATCTTTAATGGATCTAGTCTATTGATTTGAGATTAGACAACGAAAATTATATAACGTGTCACAGTGCATAAATCCAAATCCATGCTATTGACACTTAACCAAATGATGCTCATACCAAGGGTTTGTGACAAAAGCAAGAGTTTTAGGCGCAAATATTTTTGGTCCCGAAATTTATATTTTAAATAACACCAATAGTAATGGCTTCACTAATATTTATTTTATAGGTTTCATAGTATTCATTTTACTCACTACTTTTGTCATTAAGTAATTCAGCTACAAAATTATCTAGGCCTCAAAAAGTGTCAAAATTCTCTGTCTTAAAAAGGTGTCACTTAAAAGTTGGTTTTAGACCTAATCACATTTGCTTTGTAGGGTTCCAAAACTCAGACTCACCCTGCTGTTCCTTTGGGAGAATTAGACCAGCACTTACATGTGTACCTGCATCAACACTATGCTCAGACAGAAGCAAATATGTGTTTTGGGACGAGTACCATCCCTCGGACAGTGCTAATGAGCTCATTGCAAATGAACTTATTAAGAAATTTGGATTTTCACGTGACGGTCAAAATGCTGCTCCTTCACCAGCACCTGCTGCTATTGCTCCATCTCCAGAAGATTAA

Protein sequence

>MS.gene061725.t1

MEFSKVIVIIVAIILGVGLEGCHCKVVQFIFGDSLSDVGNNMHLSRSLAQASLPWYGIDMGNGLPNGRFSNGRTVADIIGDSLGLPRPPPVLDTSLTEKDILINGLNYASGGGGILNETGTYFIQKLSLDKQIELFQGTQELIRSKIGKRAAGKFFREAQYVVALGSNDFINNYLMPLYTDSWTYNDETFMDYLIGTLRRQLKLLHSLGARQLMLFGLGPMGCIPLQRVLTTTGNCRENVNKLALSFNKASSDLIDDLVKQLPNSNYRFGDAYDVVSDLISNPLKYGFQNSDSPCCSFGRIRPALTCVPASTLCSDRSKYVFWDEYHPSDSANELIANELIKKFGFSRDGQNAAPSPAPAAIAPSPED