Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018355.t1 | XP_003610174.2 | 95.7 | 414 | 15 | 2 | 1 | 414 | 1 | 411 | 5.90E-229 | 803.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018355.t1 | Q08448 | 25.8 | 244 | 131 | 8 | 77 | 310 | 6 | 209 | 8.4e-14 | 79.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018355.t1 | A0A396IIT9 | 95.7 | 414 | 15 | 2 | 1 | 414 | 1 | 411 | 4.3e-229 | 803.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene69080 | MS.gene018355 | PPI |
| MS.gene014590 | MS.gene018355 | PPI |
| MS.gene40236 | MS.gene018355 | PPI |
| MS.gene23920 | MS.gene018355 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018355.t1 | MTR_4g128800 | 95.687 | 371 | 13 | 2 | 44 | 414 | 1 | 368 | 0.0 | 736 |
| MS.gene018355.t1 | MTR_4g128800 | 92.623 | 366 | 22 | 3 | 44 | 407 | 1 | 363 | 0.0 | 697 |
| MS.gene018355.t1 | MTR_4g128800 | 95.636 | 275 | 9 | 2 | 44 | 318 | 1 | 272 | 0.0 | 543 |
| MS.gene018355.t1 | MTR_3g110530 | 53.264 | 383 | 160 | 7 | 41 | 412 | 23 | 397 | 1.47e-139 | 404 |
| MS.gene018355.t1 | MTR_1g040460 | 54.599 | 337 | 139 | 4 | 77 | 413 | 31 | 353 | 4.88e-121 | 355 |
| MS.gene018355.t1 | MTR_8g086260 | 45.251 | 358 | 169 | 6 | 75 | 412 | 88 | 438 | 5.98e-94 | 290 |
| MS.gene018355.t1 | MTR_8g086260 | 45.562 | 338 | 157 | 6 | 75 | 392 | 88 | 418 | 2.66e-87 | 272 |
| MS.gene018355.t1 | MTR_2g015960 | 44.970 | 338 | 168 | 5 | 75 | 399 | 82 | 414 | 2.67e-87 | 272 |
| MS.gene018355.t1 | MTR_8g086260 | 49.799 | 249 | 121 | 1 | 75 | 323 | 88 | 332 | 3.93e-81 | 253 |
| MS.gene018355.t1 | MTR_8g086260 | 48.864 | 264 | 125 | 2 | 75 | 335 | 88 | 344 | 9.40e-80 | 251 |
| MS.gene018355.t1 | MTR_2g015960 | 50.000 | 242 | 116 | 2 | 75 | 316 | 21 | 257 | 1.29e-76 | 239 |
| MS.gene018355.t1 | MTR_2g015960 | 50.617 | 243 | 113 | 3 | 75 | 316 | 82 | 318 | 1.22e-75 | 239 |
| MS.gene018355.t1 | MTR_8g086260 | 47.598 | 229 | 116 | 1 | 75 | 303 | 88 | 312 | 9.03e-69 | 221 |
| MS.gene018355.t1 | MTR_8g086260 | 47.598 | 229 | 116 | 1 | 75 | 303 | 88 | 312 | 1.16e-68 | 220 |
| MS.gene018355.t1 | MTR_6g005650 | 52.874 | 87 | 38 | 2 | 145 | 231 | 211 | 294 | 7.89e-22 | 95.1 |
| MS.gene018355.t1 | MTR_7g405800 | 50.575 | 87 | 40 | 2 | 145 | 231 | 144 | 227 | 9.60e-21 | 90.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018355.t1 | AT4G25770 | 67.847 | 339 | 95 | 3 | 75 | 412 | 91 | 416 | 1.02e-163 | 466 |
| MS.gene018355.t1 | AT4G25770 | 64.095 | 337 | 107 | 3 | 75 | 410 | 91 | 414 | 1.70e-149 | 431 |
| MS.gene018355.t1 | AT1G10040 | 56.305 | 341 | 137 | 4 | 75 | 412 | 79 | 410 | 2.12e-129 | 379 |
| MS.gene018355.t1 | AT5G51180 | 54.896 | 337 | 135 | 5 | 77 | 412 | 35 | 355 | 1.04e-119 | 352 |
| MS.gene018355.t1 | AT5G51180 | 54.896 | 337 | 135 | 5 | 77 | 412 | 35 | 355 | 1.04e-119 | 352 |
| MS.gene018355.t1 | AT1G10040 | 55.452 | 321 | 131 | 4 | 75 | 392 | 79 | 390 | 1.91e-118 | 351 |
| MS.gene018355.t1 | AT1G29120 | 42.466 | 365 | 179 | 4 | 64 | 411 | 91 | 441 | 6.23e-91 | 282 |
| MS.gene018355.t1 | AT1G29120 | 42.466 | 365 | 179 | 4 | 64 | 411 | 91 | 441 | 6.23e-91 | 282 |
| MS.gene018355.t1 | AT1G29120 | 42.466 | 365 | 179 | 4 | 64 | 411 | 92 | 442 | 6.41e-91 | 282 |
| MS.gene018355.t1 | AT1G29120 | 42.077 | 366 | 180 | 5 | 64 | 411 | 91 | 442 | 6.61e-88 | 274 |
| MS.gene018355.t1 | AT1G29120 | 42.614 | 352 | 171 | 4 | 64 | 398 | 91 | 428 | 1.05e-86 | 270 |
| MS.gene018355.t1 | AT1G29120 | 46.691 | 272 | 131 | 3 | 64 | 335 | 91 | 348 | 3.96e-79 | 250 |
| MS.gene018355.t1 | AT1G29120 | 46.691 | 272 | 131 | 3 | 64 | 335 | 91 | 348 | 5.06e-79 | 249 |
| MS.gene018355.t1 | AT1G29120 | 45.000 | 240 | 119 | 2 | 64 | 303 | 91 | 317 | 9.98e-68 | 218 |
Find 93 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAGGAATGAATTCGTTTC+TGG | 0.111088 | 8.2:-5559309 | None:intergenic |
| AACTTCAGCTTCTAATGTTT+TGG | 0.236634 | 8.2:+5557828 | None:intergenic |
| TGGCTCTAAACCAGCGATTC+TGG | 0.256377 | 8.2:+5557735 | None:intergenic |
| CACCTTGTCATCATGGTTAA+TGG | 0.263443 | 8.2:-5559074 | MS.gene018355:CDS |
| TCTTCAAAATTGACATTTGA+TGG | 0.269567 | 8.2:-5558146 | MS.gene018355:CDS |
| GCACTATTATCCTCTACTTT+GGG | 0.270378 | 8.2:+5559122 | None:intergenic |
| CGGTGGACGATGACTTTATC+TGG | 0.282358 | 8.2:+5558891 | None:intergenic |
| AAATTTCATCGTCGACGATT+TGG | 0.284280 | 8.2:-5559170 | MS.gene018355:CDS |
| AATGAATTCGTTTCTGGTTT+GGG | 0.288219 | 8.2:-5559303 | MS.gene018355:CDS |
| GAATGAATTCGTTTCTGGTT+TGG | 0.313753 | 8.2:-5559304 | MS.gene018355:CDS |
| AACGTTAATATATGCTTTGT+TGG | 0.329433 | 8.2:+5555736 | None:intergenic |
| GGCACATTCTTTGGGAGGCT+TGG | 0.330760 | 8.2:-5557887 | MS.gene018355:CDS |
| CAAACTGCACATTTAATTGT+AGG | 0.343395 | 8.2:-5556557 | MS.gene018355:CDS |
| CCATCATCATCATTATTATT+CGG | 0.347160 | 8.2:-5559227 | MS.gene018355:CDS |
| TTTGAGATGCTCTTCTTTCA+AGG | 0.353953 | 8.2:+5556576 | None:intergenic |
| TTGTAGCTTCCATTTCTTTG+TGG | 0.358068 | 8.2:-5556608 | MS.gene018355:intron |
| AGCACTATTATCCTCTACTT+TGG | 0.367479 | 8.2:+5559121 | None:intergenic |
| GGGGTCTCACTCAGGTTCAT+TGG | 0.376799 | 8.2:-5554506 | MS.gene018355:CDS |
| AGTTCTGCTGATTGGAGATA+TGG | 0.382588 | 8.2:-5558939 | MS.gene018355:CDS |
| TCTATTGTCAGACGCTGGCC+TGG | 0.397053 | 8.2:-5557931 | MS.gene018355:CDS |
| CATTTAATTGTAGGGAGAAC+TGG | 0.400593 | 8.2:-5556548 | MS.gene018355:CDS |
| ACCTTTGCCACGCCGCATCT+TGG | 0.416476 | 8.2:-5557700 | MS.gene018355:CDS |
| TCCTCCTCACCTTGTCATCA+TGG | 0.426931 | 8.2:-5559081 | MS.gene018355:CDS |
| ACATTCTTTGGGAGGCTTGG+TGG | 0.430561 | 8.2:-5557884 | MS.gene018355:CDS |
| AAAGGAATGCCACAAAGAAA+TGG | 0.436032 | 8.2:+5556599 | None:intergenic |
| GCAAAGGTTATAAAGTTCAT+TGG | 0.449119 | 8.2:+5557715 | None:intergenic |
| CTATTGTCAGACGCTGGCCT+GGG | 0.450168 | 8.2:-5557930 | MS.gene018355:CDS |
| GATGACAAGGTGAGGAGGAA+TGG | 0.454449 | 8.2:+5559085 | None:intergenic |
| TGGTTAATGGCATTGTTGGC+AGG | 0.459526 | 8.2:-5559061 | MS.gene018355:intron |
| GGGTCTCACTCAGGTTCATT+GGG | 0.459640 | 8.2:-5554505 | MS.gene018355:CDS |
| TTCCTCACGGACAACGATGA+TGG | 0.467217 | 8.2:-5556515 | MS.gene018355:CDS |
| CATCAGAATCCTCAATCATT+CGG | 0.469799 | 8.2:+5556474 | None:intergenic |
| ATGACAAGGTGAGGAGGAAT+GGG | 0.470142 | 8.2:+5559086 | None:intergenic |
| TCTTCTCCTCCGAATGATTG+AGG | 0.484935 | 8.2:-5556483 | MS.gene018355:CDS |
| CACTATTATCCTCTACTTTG+GGG | 0.486647 | 8.2:+5559123 | None:intergenic |
| GATGCTCTTCTTTCAAGGAA+AGG | 0.488436 | 8.2:+5556581 | None:intergenic |
| CATTATGAAGCCAGAATCGC+TGG | 0.492987 | 8.2:-5557745 | MS.gene018355:CDS |
| GAAAACCTACTGGTTGCATT+CGG | 0.496407 | 8.2:-5554227 | MS.gene018355:CDS |
| TTTGCAGTCACAATTTCTGC+AGG | 0.496865 | 8.2:+5557804 | None:intergenic |
| AAAGAGATCTTCTGCAACCC+AGG | 0.497559 | 8.2:+5557913 | None:intergenic |
| TTTCATCGTCGACGATTTGG+AGG | 0.498910 | 8.2:-5559167 | MS.gene018355:CDS |
| ATCATGGTTAATGGCATTGT+TGG | 0.501862 | 8.2:-5559065 | MS.gene018355:CDS |
| GATGGAGCACCTCATCAATT+CGG | 0.503206 | 8.2:-5555935 | MS.gene018355:CDS |
| AAACTGCACATTTAATTGTA+GGG | 0.504974 | 8.2:-5556556 | MS.gene018355:CDS |
| CCGAATAATAATGATGATGA+TGG | 0.510234 | 8.2:+5559227 | None:intergenic |
| ACTTGTGTTGAAGATATGGT+TGG | 0.526168 | 8.2:-5555957 | MS.gene018355:intron |
| AATCTCAGGTGAAAACCTAC+TGG | 0.526558 | 8.2:-5554237 | MS.gene018355:intron |
| TTCAGCTAGCCTCTCACCCA+TGG | 0.528417 | 8.2:+5558115 | None:intergenic |
| ACCAAGATGCGGCGTGGCAA+AGG | 0.535141 | 8.2:+5557699 | None:intergenic |
| CACATTGTACACACTGAAGG+TGG | 0.538544 | 8.2:-5555776 | MS.gene018355:CDS |
| ACCTACTGGTTGCATTCGGA+TGG | 0.540251 | 8.2:-5554223 | MS.gene018355:CDS |
| GATGATAAGGGGTCTCACTC+AGG | 0.541264 | 8.2:-5554514 | MS.gene018355:CDS |
| TTTGTGGCACATTCTTTGGG+AGG | 0.547005 | 8.2:-5557892 | MS.gene018355:CDS |
| AAAGCATATATTAACGTTGG+AGG | 0.550261 | 8.2:-5555731 | MS.gene018355:CDS |
| AACAAAGCATATATTAACGT+TGG | 0.554028 | 8.2:-5555734 | MS.gene018355:CDS |
| GGGTGAGAGGCTAGCTGAAG+AGG | 0.561017 | 8.2:-5558111 | MS.gene018355:intron |
| TCAGGTTCATTGGGAGCGTG+TGG | 0.573997 | 8.2:-5554496 | MS.gene018355:CDS |
| GGCCAGAAAATTGACATGGA+AGG | 0.577554 | 8.2:-5555710 | MS.gene018355:intron |
| TACCGCTCACAGTACAATCC+AGG | 0.579003 | 8.2:-5554442 | MS.gene018355:intron |
| TGGTTCAAGAGGACATAGAC+AGG | 0.585186 | 8.2:-5557680 | MS.gene018355:intron |
| ACGCCGCATCTTGGTTCAAG+AGG | 0.588632 | 8.2:-5557691 | MS.gene018355:CDS |
| TCAATCATTCGGAGGAGAAG+AGG | 0.590800 | 8.2:+5556485 | None:intergenic |
| CAGAAATTGTGACTGCAAAG+AGG | 0.591218 | 8.2:-5557800 | MS.gene018355:CDS |
| TTTGTAGAGGAGATGATAAG+GGG | 0.598296 | 8.2:-5554525 | MS.gene018355:intron |
| TTTGAACAACCCCAAAGTAG+AGG | 0.605787 | 8.2:-5559132 | MS.gene018355:CDS |
| TTCCATCATCGTTGTCCGTG+AGG | 0.608229 | 8.2:+5556513 | None:intergenic |
| ATTTGATGGTGTTGATACCA+TGG | 0.609716 | 8.2:-5558132 | MS.gene018355:CDS |
| GGAAGTTATCTATCATGTGA+AGG | 0.612715 | 8.2:+5554188 | None:intergenic |
| GTGCGGAGCAGTTTCTCAAG+AGG | 0.613223 | 8.2:-5558917 | MS.gene018355:CDS |
| TACTATCTATTGTCAGACGC+TGG | 0.614523 | 8.2:-5557936 | MS.gene018355:CDS |
| ACATTGCCGGAGACTAGATA+AGG | 0.614588 | 8.2:+5554167 | None:intergenic |
| GCGTCAACATGAACTTCCAA+AGG | 0.625059 | 8.2:-5555913 | MS.gene018355:intron |
| CCTTCAGTGTGTACAATGTG+TGG | 0.626797 | 8.2:+5555779 | None:intergenic |
| ACCATGATGACAAGGTGAGG+AGG | 0.632986 | 8.2:+5559080 | None:intergenic |
| GTGTTGAAGATATGGTTGGA+TGG | 0.633558 | 8.2:-5555953 | MS.gene018355:intron |
| CCACACATTGTACACACTGA+AGG | 0.635968 | 8.2:-5555779 | MS.gene018355:CDS |
| ATCATTCGGAGGAGAAGAGG+AGG | 0.636999 | 8.2:+5556488 | None:intergenic |
| TACCTGGATTGTACTGTGAG+CGG | 0.641947 | 8.2:+5554440 | None:intergenic |
| TTTGATGGTGTTGATACCAT+GGG | 0.642006 | 8.2:-5558131 | MS.gene018355:CDS |
| ACATTGTACACACTGAAGGT+GGG | 0.643420 | 8.2:-5555775 | MS.gene018355:CDS |
| ATGTTGACGCCGAATTGATG+AGG | 0.645392 | 8.2:+5555926 | None:intergenic |
| TGCCATTAACCATGATGACA+AGG | 0.651118 | 8.2:+5559072 | None:intergenic |
| TGGAGGCCAGAAAATTGACA+TGG | 0.659078 | 8.2:-5555714 | MS.gene018355:CDS |
| ATAATGATGATGATGGCGTA+TGG | 0.660873 | 8.2:+5559234 | None:intergenic |
| CAGAATCCTCAATCATTCGG+AGG | 0.663768 | 8.2:+5556477 | None:intergenic |
| TGTCCTCTTGAACCAAGATG+CGG | 0.666886 | 8.2:+5557688 | None:intergenic |
| CTTCAGTGTGTACAATGTGT+GGG | 0.669488 | 8.2:+5555780 | None:intergenic |
| TTAACCATGATGACAAGGTG+AGG | 0.670354 | 8.2:+5559077 | None:intergenic |
| TGCTGATTGGAGATATGGTG+CGG | 0.674450 | 8.2:-5558934 | MS.gene018355:CDS |
| GTGTTGATACCATGGGTGAG+AGG | 0.674872 | 8.2:-5558124 | MS.gene018355:CDS |
| TCTTGAACCAAGATGCGGCG+TGG | 0.680746 | 8.2:+5557693 | None:intergenic |
| ACCATCCGAATGCAACCAGT+AGG | 0.686623 | 8.2:+5554222 | None:intergenic |
| GCTTTCAGAAGAGTAAACAG+CGG | 0.740467 | 8.2:-5554467 | MS.gene018355:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATAATCAAAATATACAT+AGG | + | chr8.2:5556774-5556793 | None:intergenic | 10.0% |
| !! | TTTAAATTTATAGTAAGTAA+TGG | - | chr8.2:5558374-5558393 | MS.gene018355:intron | 10.0% |
| !!! | AATTTCTAAAATAAATCTTT+GGG | + | chr8.2:5556562-5556581 | None:intergenic | 10.0% |
| !!! | ATCTTTTTTTTTTTTAAACT+CGG | + | chr8.2:5558728-5558747 | None:intergenic | 10.0% |
| !!! | TTCTTTTATTTTATTATATC+TGG | - | chr8.2:5558602-5558621 | MS.gene018355:intron | 10.0% |
| !! | AAAAAAAAGATTTAACAACT+TGG | - | chr8.2:5558737-5558756 | MS.gene018355:intron | 15.0% |
| !! | CATTAACAATTTAATTGAAT+TGG | + | chr8.2:5557103-5557122 | None:intergenic | 15.0% |
| !! | CTATAAATTTAAATAACAGT+AGG | + | chr8.2:5558367-5558386 | None:intergenic | 15.0% |
| !! | GAAAAAAATATATGAAGTAT+AGG | - | chr8.2:5558011-5558030 | MS.gene018355:intron | 15.0% |
| !! | TTTAGAAACATATTATATGA+AGG | + | chr8.2:5558090-5558109 | None:intergenic | 15.0% |
| !!! | ATTTGAAATTATACAAACAA+CGG | - | chr8.2:5556653-5556672 | MS.gene018355:intron | 15.0% |
| !!! | CAATTTCTAAAATAAATCTT+TGG | + | chr8.2:5556563-5556582 | None:intergenic | 15.0% |
| !!! | CACTTTTTCATTTTATTAAA+GGG | - | chr8.2:5556614-5556633 | MS.gene018355:intron | 15.0% |
| !!! | GTAATTTAAATTGCAATTTT+GGG | - | chr8.2:5558524-5558543 | MS.gene018355:intron | 15.0% |
| !!! | GTAATTTTAATGATATATTG+TGG | - | chr8.2:5555295-5555314 | MS.gene018355:intron | 15.0% |
| !!! | TCACTTTTTCATTTTATTAA+AGG | - | chr8.2:5556613-5556632 | MS.gene018355:intron | 15.0% |
| !!! | TGTAATTTAAATTGCAATTT+TGG | - | chr8.2:5558523-5558542 | MS.gene018355:intron | 15.0% |
| !!! | TTTGTTTACTTTTAATTATC+TGG | + | chr8.2:5558790-5558809 | None:intergenic | 15.0% |
| !! | AACAGACAAATAAAATATCA+CGG | + | chr8.2:5559222-5559241 | None:intergenic | 20.0% |
| !! | AACTTAATTCATGTTTATCT+AGG | - | chr8.2:5555523-5555542 | MS.gene018355:intron | 20.0% |
| !! | AAGTGTAAACAATATTATTG+TGG | - | chr8.2:5555110-5555129 | MS.gene018355:intron | 20.0% |
| !! | AATGTGAATGAATTATCATA+AGG | + | chr8.2:5555487-5555506 | None:intergenic | 20.0% |
| !! | AGGTTAATTATTTCAAAGTT+AGG | + | chr8.2:5558459-5558478 | None:intergenic | 20.0% |
| !! | ATATTGAAATTGTCTTAACT+GGG | - | chr8.2:5557343-5557362 | MS.gene018355:intron | 20.0% |
| !! | CTATATGTTAAAATTTGGTA+GGG | + | chr8.2:5558672-5558691 | None:intergenic | 20.0% |
| !! | GTTGTTTGTATAATTTCAAA+TGG | + | chr8.2:5556654-5556673 | None:intergenic | 20.0% |
| !! | TACATCATTGTAACAATATA+TGG | + | chr8.2:5557456-5557475 | None:intergenic | 20.0% |
| !! | TATAACAAACTTAAATGACT+CGG | + | chr8.2:5557057-5557076 | None:intergenic | 20.0% |
| !! | TATAAGATAAAAACTTTACC+TGG | + | chr8.2:5559061-5559080 | None:intergenic | 20.0% |
| !! | TTCGATAATTATTAATCTAC+TGG | - | chr8.2:5558816-5558835 | MS.gene018355:intron | 20.0% |
| !!! | ACATGAATTAAGTTTAAAAC+TGG | + | chr8.2:5555517-5555536 | None:intergenic | 20.0% |
| !!! | ATTGTGGATTTTCATATAAA+TGG | - | chr8.2:5555126-5555145 | MS.gene018355:intron | 20.0% |
| !!! | TAAAACATTTTACTTCAAGT+TGG | + | chr8.2:5555997-5556016 | None:intergenic | 20.0% |
| ! | AAACTGCACATTTAATTGTA+GGG | - | chr8.2:5556926-5556945 | MS.gene018355:intron | 25.0% |
| ! | AACAAAGCATATATTAACGT+TGG | - | chr8.2:5557748-5557767 | MS.gene018355:CDS | 25.0% |
| ! | AACGTTAATATATGCTTTGT+TGG | + | chr8.2:5557749-5557768 | None:intergenic | 25.0% |
| ! | AAGACATCTAATTTGAAAAG+AGG | + | chr8.2:5557195-5557214 | None:intergenic | 25.0% |
| ! | AATTACTAATCTTCAGTTGA+TGG | + | chr8.2:5556312-5556331 | None:intergenic | 25.0% |
| ! | ACTAATAACACAAATCTCTA+AGG | + | chr8.2:5556113-5556132 | None:intergenic | 25.0% |
| ! | AGAGAAAACCATAAATCATA+GGG | - | chr8.2:5556139-5556158 | MS.gene018355:intron | 25.0% |
| ! | AGGATAACTATTAGTTAATC+CGG | - | chr8.2:5554880-5554899 | MS.gene018355:intron | 25.0% |
| ! | ATATTATATGAAGGTCCAAA+CGG | + | chr8.2:5558081-5558100 | None:intergenic | 25.0% |
| ! | CAAAATCATCTGTCAAATTA+TGG | + | chr8.2:5555054-5555073 | None:intergenic | 25.0% |
| ! | CATTGTATATGTAATTCACA+CGG | - | chr8.2:5554639-5554658 | MS.gene018355:intron | 25.0% |
| ! | CCATCATCATCATTATTATT+CGG | - | chr8.2:5554255-5554274 | MS.gene018355:intron | 25.0% |
| ! | CTTTGTATGTATCTAATTGT+TGG | - | chr8.2:5554954-5554973 | MS.gene018355:intron | 25.0% |
| ! | GATATTGAAATTGTCTTAAC+TGG | - | chr8.2:5557342-5557361 | MS.gene018355:intron | 25.0% |
| ! | GCTATATGTTAAAATTTGGT+AGG | + | chr8.2:5558673-5558692 | None:intergenic | 25.0% |
| ! | GTCAAATTATGGTATAACAA+GGG | + | chr8.2:5555043-5555062 | None:intergenic | 25.0% |
| ! | TAAATTGTTAATGATTGTGC+AGG | - | chr8.2:5557110-5557129 | MS.gene018355:intron | 25.0% |
| ! | TATTGAAATTGTCTTAACTG+GGG | - | chr8.2:5557344-5557363 | MS.gene018355:intron | 25.0% |
| ! | TCTTCAAAATTGACATTTGA+TGG | - | chr8.2:5555336-5555355 | MS.gene018355:intron | 25.0% |
| ! | TGTCAAATTATGGTATAACA+AGG | + | chr8.2:5555044-5555063 | None:intergenic | 25.0% |
| ! | TTTAATGATATATTGTGGAC+AGG | - | chr8.2:5555300-5555319 | MS.gene018355:intron | 25.0% |
| !! | ACTAATTCATCATGTTTTGT+GGG | + | chr8.2:5554767-5554786 | None:intergenic | 25.0% |
| !! | AGATTTGTGTTATTAGTATG+AGG | - | chr8.2:5556116-5556135 | MS.gene018355:intron | 25.0% |
| !! | AGTTTTGCATATATGGATTT+AGG | - | chr8.2:5554860-5554879 | MS.gene018355:intron | 25.0% |
| !! | ATTTATGCTCCTTAATTTTC+CGG | - | chr8.2:5556848-5556867 | MS.gene018355:intron | 25.0% |
| !! | CCAAAGTAATTTAAAGTTCA+GGG | + | chr8.2:5555440-5555459 | None:intergenic | 25.0% |
| !! | CTCAATCTTAATGTTTTACA+TGG | - | chr8.2:5557611-5557630 | MS.gene018355:intron | 25.0% |
| !! | GTTTTTATCTTATAGCTTTC+CGG | - | chr8.2:5559067-5559086 | MS.gene018355:CDS | 25.0% |
| !! | TATCTACAGAGATTTTCTTA+CGG | + | chr8.2:5554614-5554633 | None:intergenic | 25.0% |
| !! | TCCAAAGTAATTTAAAGTTC+AGG | + | chr8.2:5555441-5555460 | None:intergenic | 25.0% |
| !! | TGATAATGATATAGTGTCAA+TGG | - | chr8.2:5557254-5557273 | MS.gene018355:intron | 25.0% |
| !! | TTGAAAATAGCTTCTCATTT+TGG | - | chr8.2:5555156-5555175 | MS.gene018355:intron | 25.0% |
| !!! | AAAGGATATTTTGATAACTG+TGG | - | chr8.2:5558215-5558234 | MS.gene018355:intron | 25.0% |
| !!! | AGACAGTTTTTATTTCTTAC+AGG | + | chr8.2:5557811-5557830 | None:intergenic | 25.0% |
| !!! | ATATTAAGTGGTTTTTGAGA+AGG | + | chr8.2:5556265-5556284 | None:intergenic | 25.0% |
| !!! | CTAGGAAAATTTGTTTTTCT+TGG | - | chr8.2:5558318-5558337 | MS.gene018355:intron | 25.0% |
| !!! | GATACTTTTTTGTAGAGAAA+AGG | - | chr8.2:5558197-5558216 | MS.gene018355:intron | 25.0% |
| !!! | TATTTAATTTGTAGCAGCTT+GGG | - | chr8.2:5556788-5556807 | MS.gene018355:intron | 25.0% |
| !!! | TGTATGATTTTAGTTTCTGA+TGG | - | chr8.2:5558417-5558436 | MS.gene018355:intron | 25.0% |
| !!! | TTATTTAATTTGTAGCAGCT+TGG | - | chr8.2:5556787-5556806 | MS.gene018355:intron | 25.0% |
| AAAAAACTCGTGAATTGACT+TGG | - | chr8.2:5554983-5555002 | MS.gene018355:intron | 30.0% | |
| AAACTACAACCAAATGCATT+TGG | - | chr8.2:5554513-5554532 | MS.gene018355:CDS | 30.0% | |
| AAAGCATATATTAACGTTGG+AGG | - | chr8.2:5557751-5557770 | MS.gene018355:CDS | 30.0% | |
| AAGAAAATAATTAGCTCGTG+TGG | + | chr8.2:5557429-5557448 | None:intergenic | 30.0% | |
| AAGACTAGAAATTGTATGCT+AGG | + | chr8.2:5558875-5558894 | None:intergenic | 30.0% | |
| AATAACAGTAGGAGATCATT+CGG | + | chr8.2:5558356-5558375 | None:intergenic | 30.0% | |
| AGACTAGAAATTGTATGCTA+GGG | + | chr8.2:5558874-5558893 | None:intergenic | 30.0% | |
| AGCAAAGTAAAAAAGAGGAA+AGG | + | chr8.2:5558044-5558063 | None:intergenic | 30.0% | |
| AGCGGCTATATGTTAAAATT+TGG | + | chr8.2:5558677-5558696 | None:intergenic | 30.0% | |
| AGCTATAAACTTCCAAAGAA+AGG | + | chr8.2:5558489-5558508 | None:intergenic | 30.0% | |
| AGCTTAAAATTGCATACAAG+AGG | - | chr8.2:5556033-5556052 | MS.gene018355:intron | 30.0% | |
| ATGAAATTTCCATTGAACCT+TGG | - | chr8.2:5558263-5558282 | MS.gene018355:intron | 30.0% | |
| ATGGATCATGTCATATTAAG+TGG | + | chr8.2:5556277-5556296 | None:intergenic | 30.0% | |
| ATTAGACTAGCAGAAAAGAA+AGG | + | chr8.2:5557659-5557678 | None:intergenic | 30.0% | |
| ATTTGTCTGTTGTTAATCTC+AGG | - | chr8.2:5559231-5559250 | MS.gene018355:CDS | 30.0% | |
| CAAACTGCACATTTAATTGT+AGG | - | chr8.2:5556925-5556944 | MS.gene018355:intron | 30.0% | |
| CAAATACCAGAGTCAAAAAA+AGG | + | chr8.2:5557849-5557868 | None:intergenic | 30.0% | |
| CAAATATAAGTGACAGTAAC+AGG | - | chr8.2:5555192-5555211 | MS.gene018355:intron | 30.0% | |
| CAAATTGTACTGAAGCTTAA+TGG | - | chr8.2:5557230-5557249 | MS.gene018355:intron | 30.0% | |
| CAAGAAGTTTACTTAAGATG+AGG | - | chr8.2:5557884-5557903 | MS.gene018355:CDS | 30.0% | |
| CAATATGATTATGAGAGTGA+AGG | + | chr8.2:5554459-5554478 | None:intergenic | 30.0% | |
| CCCTGAACTTTAAATTACTT+TGG | - | chr8.2:5555437-5555456 | MS.gene018355:intron | 30.0% | |
| CTGAAAATTCCAAATGCATT+TGG | + | chr8.2:5554525-5554544 | None:intergenic | 30.0% | |
| GAGAGAAAACCATAAATCAT+AGG | - | chr8.2:5556138-5556157 | MS.gene018355:intron | 30.0% | |
| GATATCTGGCAAAATTCATT+TGG | + | chr8.2:5556453-5556472 | None:intergenic | 30.0% | |
| GCAAAGGTTATAAAGTTCAT+TGG | + | chr8.2:5555770-5555789 | None:intergenic | 30.0% | |
| GTATAGTATGTTCTTCTTGT+AGG | - | chr8.2:5558293-5558312 | MS.gene018355:intron | 30.0% | |
| GTATCAAAGTTTAATTGCGA+AGG | + | chr8.2:5556204-5556223 | None:intergenic | 30.0% | |
| TCTTCATGTTTATAACCGTT+TGG | - | chr8.2:5558063-5558082 | MS.gene018355:intron | 30.0% | |
| TGAAATTTCCATTGAACCTT+GGG | - | chr8.2:5558264-5558283 | MS.gene018355:intron | 30.0% | |
| TGAAGAGCAAAGTAAAAAAG+AGG | + | chr8.2:5558049-5558068 | None:intergenic | 30.0% | |
| TGGTATTTGTGAAAGAAGTA+TGG | - | chr8.2:5557860-5557879 | MS.gene018355:CDS | 30.0% | |
| TTATTGATGCTCAAGTATGA+AGG | - | chr8.2:5554908-5554927 | MS.gene018355:intron | 30.0% | |
| TTTATCTTGCTGAATGTTCT+TGG | + | chr8.2:5557987-5558006 | None:intergenic | 30.0% | |
| TTTGGAAGTTTATAGCTTAC+TGG | - | chr8.2:5558492-5558511 | MS.gene018355:intron | 30.0% | |
| TTTGGCAACGAAAACAATTT+AGG | + | chr8.2:5556435-5556454 | None:intergenic | 30.0% | |
| ! | AACTTCAGCTTCTAATGTTT+TGG | + | chr8.2:5555657-5555676 | None:intergenic | 30.0% |
| ! | ACAAATCTCTAAGGAAACAA+GGG | + | chr8.2:5556104-5556123 | None:intergenic | 30.0% |
| ! | AGATTTTACAAATCAGTCCA+TGG | + | chr8.2:5558575-5558594 | None:intergenic | 30.0% |
| ! | ATTTTGCCAGATATCTTCAT+AGG | - | chr8.2:5556458-5556477 | MS.gene018355:intron | 30.0% |
| ! | CCGAATAATAATGATGATGA+TGG | + | chr8.2:5554258-5554277 | None:intergenic | 30.0% |
| ! | GACTAATTCATCATGTTTTG+TGG | + | chr8.2:5554768-5554787 | None:intergenic | 30.0% |
| ! | GAGCTAAAGTTTTGCATATA+TGG | - | chr8.2:5554853-5554872 | MS.gene018355:intron | 30.0% |
| ! | TAAGGAGCATAAATAAGAGA+CGG | + | chr8.2:5556842-5556861 | None:intergenic | 30.0% |
| ! | TAGTTGCAATTTGATCCTTT+TGG | - | chr8.2:5555402-5555421 | MS.gene018355:intron | 30.0% |
| ! | TTTGTTGTACGAGCTAAAAA+TGG | - | chr8.2:5556688-5556707 | MS.gene018355:intron | 30.0% |
| ! | TTTTGTAGAGGAGATGATAA+GGG | - | chr8.2:5558956-5558975 | MS.gene018355:intron | 30.0% |
| ! | TTTTTGTAGAGGAGATGATA+AGG | - | chr8.2:5558955-5558974 | MS.gene018355:intron | 30.0% |
| !! | AAGACATATGCTTTTTGTAG+AGG | - | chr8.2:5558944-5558963 | MS.gene018355:intron | 30.0% |
| !! | AATTTTAACATATAGCCGCT+TGG | - | chr8.2:5558677-5558696 | MS.gene018355:intron | 30.0% |
| !! | ATTTAATTTGTAGCAGCTTG+GGG | - | chr8.2:5556789-5556808 | MS.gene018355:intron | 30.0% |
| !!! | AAATTGCAATTTTGGGTTTC+TGG | - | chr8.2:5558531-5558550 | MS.gene018355:intron | 30.0% |
| !!! | TCAGGTTTTATTTTGCTTTC+AGG | - | chr8.2:5557918-5557937 | MS.gene018355:CDS | 30.0% |
| !!! | TGTAAACCTTTTTTTGACTC+TGG | - | chr8.2:5557840-5557859 | MS.gene018355:CDS | 30.0% |
| AAAACCATAAATCATAGGGC+TGG | - | chr8.2:5556143-5556162 | MS.gene018355:intron | 35.0% | |
| AAAGGAATGCCACAAAGAAA+TGG | + | chr8.2:5556886-5556905 | None:intergenic | 35.0% | |
| AAATTTCATCGTCGACGATT+TGG | - | chr8.2:5554312-5554331 | MS.gene018355:intron | 35.0% | |
| AAGAAAAAATAGCAGATGCC+AGG | + | chr8.2:5555906-5555925 | None:intergenic | 35.0% | |
| ACTTGTGTTGAAGATATGGT+TGG | - | chr8.2:5557525-5557544 | MS.gene018355:intron | 35.0% | |
| AGCACTATTATCCTCTACTT+TGG | + | chr8.2:5554364-5554383 | None:intergenic | 35.0% | |
| ATCATGGTTAATGGCATTGT+TGG | - | chr8.2:5554417-5554436 | MS.gene018355:intron | 35.0% | |
| CACTATTATCCTCTACTTTG+GGG | + | chr8.2:5554362-5554381 | None:intergenic | 35.0% | |
| CATCAGAAAGTCTTTACCTT+TGG | + | chr8.2:5557588-5557607 | None:intergenic | 35.0% | |
| CATCAGAATCCTCAATCATT+CGG | + | chr8.2:5557011-5557030 | None:intergenic | 35.0% | |
| CATTTAATTGTAGGGAGAAC+TGG | - | chr8.2:5556934-5556953 | MS.gene018355:intron | 35.0% | |
| CTACAAGAACCGGAAAATTA+AGG | + | chr8.2:5556860-5556879 | None:intergenic | 35.0% | |
| GCACTATTATCCTCTACTTT+GGG | + | chr8.2:5554363-5554382 | None:intergenic | 35.0% | |
| GGAAGTTATCTATCATGTGA+AGG | + | chr8.2:5559297-5559316 | None:intergenic | 35.0% | |
| GTGTATTATGAAGTGCATCT+CGG | - | chr8.2:5557309-5557328 | MS.gene018355:intron | 35.0% | |
| TAGGGTAGTCAAATTCAGAT+TGG | + | chr8.2:5558654-5558673 | None:intergenic | 35.0% | |
| TATGATTATGAGAGTGAAGG+TGG | + | chr8.2:5554456-5554475 | None:intergenic | 35.0% | |
| TCCATCATAGTCAAGCTATT+GGG | - | chr8.2:5556740-5556759 | MS.gene018355:intron | 35.0% | |
| TTCCATCATAGTCAAGCTAT+TGG | - | chr8.2:5556739-5556758 | MS.gene018355:intron | 35.0% | |
| TTGAGCATCAATAAACTGAC+CGG | + | chr8.2:5554902-5554921 | None:intergenic | 35.0% | |
| TTGATACGAAAGTTACAGAC+CGG | - | chr8.2:5556217-5556236 | MS.gene018355:intron | 35.0% | |
| TTGTAGCTTCCATTTCTTTG+TGG | - | chr8.2:5556874-5556893 | MS.gene018355:intron | 35.0% | |
| TTTGGAGGAATCAAAAAGTC+TGG | + | chr8.2:5555639-5555658 | None:intergenic | 35.0% | |
| TTTGTAGAGGAGATGATAAG+GGG | - | chr8.2:5558957-5558976 | MS.gene018355:intron | 35.0% | |
| ! | AACCTTCCATGTCAATTTTC+TGG | + | chr8.2:5557777-5557796 | None:intergenic | 35.0% |
| ! | AGGATAGTCGTGCATATTTT+TGG | - | chr8.2:5557938-5557957 | MS.gene018355:CDS | 35.0% |
| ! | ATAGCATCAACAAGTTTTGC+CGG | + | chr8.2:5559089-5559108 | None:intergenic | 35.0% |
| ! | ATGTTTTGTGGGACCTAAAT+AGG | + | chr8.2:5554756-5554775 | None:intergenic | 35.0% |
| ! | CACAAATCTCTAAGGAAACA+AGG | + | chr8.2:5556105-5556124 | None:intergenic | 35.0% |
| ! | GAATTTTCAGTTCTGCTGAT+TGG | - | chr8.2:5554535-5554554 | MS.gene018355:intron | 35.0% |
| ! | GATGAGGAAATTTTCATCTC+AGG | - | chr8.2:5557900-5557919 | MS.gene018355:CDS | 35.0% |
| ! | TCTTTTGTGGCACATTCTTT+GGG | - | chr8.2:5555587-5555606 | MS.gene018355:intron | 35.0% |
| ! | TGGTAAACATCTTTTCCTCA+CGG | - | chr8.2:5556954-5556973 | MS.gene018355:intron | 35.0% |
| ! | TTTGAGATGCTCTTCTTTCA+AGG | + | chr8.2:5556909-5556928 | None:intergenic | 35.0% |
| ! | TTTTCCAGCCCTATGATTTA+TGG | + | chr8.2:5556150-5556169 | None:intergenic | 35.0% |
| !! | AAATCCAGCTCTAGATGAAA+GGG | - | chr8.2:5559124-5559143 | MS.gene018355:CDS | 35.0% |
| !! | ATAATGATGATGATGGCGTA+TGG | + | chr8.2:5554251-5554270 | None:intergenic | 35.0% |
| !! | ATTTGATGGTGTTGATACCA+TGG | - | chr8.2:5555350-5555369 | MS.gene018355:intron | 35.0% |
| !! | CTTGACTTGTGTTGAAGATA+TGG | - | chr8.2:5557521-5557540 | MS.gene018355:intron | 35.0% |
| !! | TAAATCCAGCTCTAGATGAA+AGG | - | chr8.2:5559123-5559142 | MS.gene018355:CDS | 35.0% |
| !! | TAATCTTCAGTTGATGGTTC+TGG | + | chr8.2:5556306-5556325 | None:intergenic | 35.0% |
| !! | TAGCTTCTCATTTTGGTGAA+CGG | - | chr8.2:5555163-5555182 | MS.gene018355:intron | 35.0% |
| !! | TTCAGCTTCTAATGTTTTGG+AGG | + | chr8.2:5555654-5555673 | None:intergenic | 35.0% |
| !! | TTGATGGTTCTGGAATCATA+TGG | + | chr8.2:5556296-5556315 | None:intergenic | 35.0% |
| !! | TTTGATGGTGTTGATACCAT+GGG | - | chr8.2:5555351-5555370 | MS.gene018355:intron | 35.0% |
| !!! | TAGTCGTGCATATTTTTGGT+AGG | - | chr8.2:5557942-5557961 | MS.gene018355:intron | 35.0% |
| AAACTTCCAAAGAAAGGCAG+AGG | + | chr8.2:5558483-5558502 | None:intergenic | 40.0% | |
| AATCTCAGGTGAAAACCTAC+TGG | - | chr8.2:5559245-5559264 | MS.gene018355:CDS | 40.0% | |
| AATTTCCATTGAACCTTGGG+TGG | - | chr8.2:5558267-5558286 | MS.gene018355:intron | 40.0% | |
| ACATTGTACACACTGAAGGT+GGG | - | chr8.2:5557707-5557726 | MS.gene018355:CDS | 40.0% | |
| ACTTAAGTGTGTGTGCATAC+TGG | - | chr8.2:5556812-5556831 | MS.gene018355:intron | 40.0% | |
| ATGTTCTTCTTGTAGGAGCT+AGG | - | chr8.2:5558300-5558319 | MS.gene018355:intron | 40.0% | |
| CACCTTGTCATCATGGTTAA+TGG | - | chr8.2:5554408-5554427 | MS.gene018355:intron | 40.0% | |
| CAGAAATTGTGACTGCAAAG+AGG | - | chr8.2:5555682-5555701 | MS.gene018355:intron | 40.0% | |
| CAGATGCCAGGCAAAAATAA+AGG | + | chr8.2:5555894-5555913 | None:intergenic | 40.0% | |
| CATAGTCAAGCTATTGGGAT+AGG | - | chr8.2:5556745-5556764 | MS.gene018355:intron | 40.0% | |
| CTTCAGTGTGTACAATGTGT+GGG | + | chr8.2:5557705-5557724 | None:intergenic | 40.0% | |
| GAAATGGAAGCTACAAGAAC+CGG | + | chr8.2:5556870-5556889 | None:intergenic | 40.0% | |
| GATGCTCTTCTTTCAAGGAA+AGG | + | chr8.2:5556904-5556923 | None:intergenic | 40.0% | |
| GCTTTCAGAAGAGTAAACAG+CGG | - | chr8.2:5559015-5559034 | MS.gene018355:intron | 40.0% | |
| GGAACATCTAGCTGAAATTG+TGG | + | chr8.2:5559201-5559220 | None:intergenic | 40.0% | |
| GGGAAGTTTAAGAGACCAAA+AGG | + | chr8.2:5555420-5555439 | None:intergenic | 40.0% | |
| GTGTTGAAGATATGGTTGGA+TGG | - | chr8.2:5557529-5557548 | MS.gene018355:intron | 40.0% | |
| TACTATCTATTGTCAGACGC+TGG | - | chr8.2:5555546-5555565 | MS.gene018355:intron | 40.0% | |
| TCCCAATAGCTTGACTATGA+TGG | + | chr8.2:5556744-5556763 | None:intergenic | 40.0% | |
| TGCCAGGCAAAAATAAAGGT+AGG | + | chr8.2:5555890-5555909 | None:intergenic | 40.0% | |
| TGCCATTAACCATGATGACA+AGG | + | chr8.2:5554413-5554432 | None:intergenic | 40.0% | |
| TGTATCACGTTTCAGCATCA+TGG | - | chr8.2:5555852-5555871 | MS.gene018355:intron | 40.0% | |
| TTAACCATGATGACAAGGTG+AGG | + | chr8.2:5554408-5554427 | None:intergenic | 40.0% | |
| TTTGAACAACCCCAAAGTAG+AGG | - | chr8.2:5554350-5554369 | MS.gene018355:intron | 40.0% | |
| TTTGCAGTCACAATTTCTGC+AGG | + | chr8.2:5555681-5555700 | None:intergenic | 40.0% | |
| ! | AAAAGCACAGATGACTGTGA+TGG | + | chr8.2:5555956-5555975 | None:intergenic | 40.0% |
| ! | AGAGATTTTGCCGCCTATTT+AGG | - | chr8.2:5554740-5554759 | MS.gene018355:intron | 40.0% |
| ! | AGTTCTGCTGATTGGAGATA+TGG | - | chr8.2:5554543-5554562 | MS.gene018355:intron | 40.0% |
| ! | CTACAGAGATTTTCTTACGG+TGG | + | chr8.2:5554611-5554630 | None:intergenic | 40.0% |
| ! | CTCTTTTGTGGCACATTCTT+TGG | - | chr8.2:5555586-5555605 | MS.gene018355:intron | 40.0% |
| ! | GAAAACCTACTGGTTGCATT+CGG | - | chr8.2:5559255-5559274 | MS.gene018355:CDS | 40.0% |
| ! | GTTGCAGAAGATCTCTTTTG+TGG | - | chr8.2:5555574-5555593 | MS.gene018355:intron | 40.0% |
| ! | TGATGAACTGATTCTTGCCA+TGG | - | chr8.2:5558555-5558574 | MS.gene018355:intron | 40.0% |
| ! | TTCAAGTTCAAACCCAAGCT+TGG | - | chr8.2:5554691-5554710 | MS.gene018355:intron | 40.0% |
| ! | TTTTGTGGGACCTAAATAGG+CGG | + | chr8.2:5554753-5554772 | None:intergenic | 40.0% |
| !! | AAGTTACAGACCGGTTTTCA+TGG | - | chr8.2:5556226-5556245 | MS.gene018355:intron | 40.0% |
| !! | ATATAGCCGCTTGGATTAGT+CGG | - | chr8.2:5558686-5558705 | MS.gene018355:intron | 40.0% |
| !! | CGTGAATTGACTTGGTTTGA+GGG | - | chr8.2:5554991-5555010 | MS.gene018355:intron | 40.0% |
| !! | GATCTCTTCTCATCGCTTTT+TGG | - | chr8.2:5554277-5554296 | MS.gene018355:intron | 40.0% |
| !! | TCGTGAATTGACTTGGTTTG+AGG | - | chr8.2:5554990-5555009 | MS.gene018355:intron | 40.0% |
| !!! | CACCTACCTTTATTTTTGCC+TGG | - | chr8.2:5555885-5555904 | MS.gene018355:intron | 40.0% |
| !!! | GTTTGAGGGTGTAGTTTTGA+CGG | - | chr8.2:5555005-5555024 | MS.gene018355:intron | 40.0% |
| AAACTCGGTATCATGACCCA+AGG | + | chr8.2:5558713-5558732 | None:intergenic | 45.0% | |
| AAAGAGATCTTCTGCAACCC+AGG | + | chr8.2:5555572-5555591 | None:intergenic | 45.0% | |
| ATAATTAGCTCGTGTGGCAG+AGG | + | chr8.2:5557423-5557442 | None:intergenic | 45.0% | |
| ATGACAAGGTGAGGAGGAAT+GGG | + | chr8.2:5554399-5554418 | None:intergenic | 45.0% | |
| ATGTTCCGTGCCATGAAAAC+CGG | + | chr8.2:5556239-5556258 | None:intergenic | 45.0% | |
| ATGTTGACGCCGAATTGATG+AGG | + | chr8.2:5557559-5557578 | None:intergenic | 45.0% | |
| CACATTGTACACACTGAAGG+TGG | - | chr8.2:5557706-5557725 | MS.gene018355:CDS | 45.0% | |
| CAGAATCCTCAATCATTCGG+AGG | + | chr8.2:5557008-5557027 | None:intergenic | 45.0% | |
| CATACTATACCAACCACCCA+AGG | + | chr8.2:5558283-5558302 | None:intergenic | 45.0% | |
| CATTATGAAGCCAGAATCGC+TGG | - | chr8.2:5555737-5555756 | MS.gene018355:CDS | 45.0% | |
| CCACACATTGTACACACTGA+AGG | - | chr8.2:5557703-5557722 | MS.gene018355:CDS | 45.0% | |
| CCTTCAGTGTGTACAATGTG+TGG | + | chr8.2:5557706-5557725 | None:intergenic | 45.0% | |
| GCGTCAACATGAACTTCCAA+AGG | - | chr8.2:5557569-5557588 | MS.gene018355:intron | 45.0% | |
| GGATGGCCTATGAAGATATC+TGG | + | chr8.2:5556467-5556486 | None:intergenic | 45.0% | |
| GGCCAGAAAATTGACATGGA+AGG | - | chr8.2:5557772-5557791 | MS.gene018355:CDS | 45.0% | |
| TACCTGGATTGTACTGTGAG+CGG | + | chr8.2:5559045-5559064 | None:intergenic | 45.0% | |
| TCAAATGTCCATACCTGCAC+AGG | + | chr8.2:5556488-5556507 | None:intergenic | 45.0% | |
| TCAATCATTCGGAGGAGAAG+AGG | + | chr8.2:5557000-5557019 | None:intergenic | 45.0% | |
| TCTTCTCCTCCGAATGATTG+AGG | - | chr8.2:5556999-5557018 | MS.gene018355:intron | 45.0% | |
| TGAACTTGAACCAGTGACCT+TGG | + | chr8.2:5554681-5554700 | None:intergenic | 45.0% | |
| TGGAGGCCAGAAAATTGACA+TGG | - | chr8.2:5557768-5557787 | MS.gene018355:CDS | 45.0% | |
| TGGTTAATGGCATTGTTGGC+AGG | - | chr8.2:5554421-5554440 | MS.gene018355:intron | 45.0% | |
| TGGTTCAAGAGGACATAGAC+AGG | - | chr8.2:5555802-5555821 | MS.gene018355:CDS | 45.0% | |
| TGTCCTCTTGAACCAAGATG+CGG | + | chr8.2:5555797-5555816 | None:intergenic | 45.0% | |
| TTTGTGGCACATTCTTTGGG+AGG | - | chr8.2:5555590-5555609 | MS.gene018355:intron | 45.0% | |
| ! | AATGCCCTTTCATCTAGAGC+TGG | + | chr8.2:5559131-5559150 | None:intergenic | 45.0% |
| ! | GATGGAGCACCTCATCAATT+CGG | - | chr8.2:5557547-5557566 | MS.gene018355:intron | 45.0% |
| ! | TCTAGCTTAACCAAGGTCAC+TGG | - | chr8.2:5554668-5554687 | MS.gene018355:intron | 45.0% |
| ! | TGCTGATTGGAGATATGGTG+CGG | - | chr8.2:5554548-5554567 | MS.gene018355:intron | 45.0% |
| ! | TTTCATCGTCGACGATTTGG+AGG | - | chr8.2:5554315-5554334 | MS.gene018355:intron | 45.0% |
| !! | GCATGTGCTGACTTTGACAT+GGG | + | chr8.2:5557280-5557299 | None:intergenic | 45.0% |
| !! | GCTCTCTTCTAGCTTAACCA+AGG | - | chr8.2:5554661-5554680 | MS.gene018355:intron | 45.0% |
| !! | TGCATGTGCTGACTTTGACA+TGG | + | chr8.2:5557281-5557300 | None:intergenic | 45.0% |
| !!! | GGCTAGCTGAAGAGGTATTT+TGG | - | chr8.2:5555379-5555398 | MS.gene018355:intron | 45.0% |
| ACCAACCACCCAAGGTTCAA+TGG | + | chr8.2:5558275-5558294 | None:intergenic | 50.0% | |
| ACCATCCGAATGCAACCAGT+AGG | + | chr8.2:5559263-5559282 | None:intergenic | 50.0% | |
| ACCATGATGACAAGGTGAGG+AGG | + | chr8.2:5554405-5554424 | None:intergenic | 50.0% | |
| ATCATTCGGAGGAGAAGAGG+AGG | + | chr8.2:5556997-5557016 | None:intergenic | 50.0% | |
| ATGTCCATACCTGCACAGGA+TGG | + | chr8.2:5556484-5556503 | None:intergenic | 50.0% | |
| CAAGGACCGACTAATCCAAG+CGG | + | chr8.2:5558695-5558714 | None:intergenic | 50.0% | |
| CGGTGGACGATGACTTTATC+TGG | + | chr8.2:5554594-5554613 | None:intergenic | 50.0% | |
| GAGTTTATTGACAGCCCTGC+AGG | - | chr8.2:5557389-5557408 | MS.gene018355:intron | 50.0% | |
| GATGACAAGGTGAGGAGGAA+TGG | + | chr8.2:5554400-5554419 | None:intergenic | 50.0% | |
| GATGATAAGGGGTCTCACTC+AGG | - | chr8.2:5558968-5558987 | MS.gene018355:intron | 50.0% | |
| GGGTCTCACTCAGGTTCATT+GGG | - | chr8.2:5558977-5558996 | MS.gene018355:intron | 50.0% | |
| TACCGCTCACAGTACAATCC+AGG | - | chr8.2:5559040-5559059 | MS.gene018355:intron | 50.0% | |
| TCCATTGAACCTTGGGTGGT+TGG | - | chr8.2:5558271-5558290 | MS.gene018355:intron | 50.0% | |
| TCCTCCTCACCTTGTCATCA+TGG | - | chr8.2:5554401-5554420 | MS.gene018355:intron | 50.0% | |
| TTCCATCATCGTTGTCCGTG+AGG | + | chr8.2:5556972-5556991 | None:intergenic | 50.0% | |
| TTCCTCACGGACAACGATGA+TGG | - | chr8.2:5556967-5556986 | MS.gene018355:intron | 50.0% | |
| ! | ACATTCTTTGGGAGGCTTGG+TGG | - | chr8.2:5555598-5555617 | MS.gene018355:intron | 50.0% |
| ! | ACCTACTGGTTGCATTCGGA+TGG | - | chr8.2:5559259-5559278 | MS.gene018355:CDS | 50.0% |
| ! | GTGTTGATACCATGGGTGAG+AGG | - | chr8.2:5555358-5555377 | MS.gene018355:intron | 50.0% |
| !! | ACAGACCGGTTTTCATGGCA+CGG | - | chr8.2:5556231-5556250 | MS.gene018355:intron | 50.0% |
| !! | GCTTGGATTAGTCGGTCCTT+GGG | - | chr8.2:5558694-5558713 | MS.gene018355:intron | 50.0% |
| !! | TGGCTCTAAACCAGCGATTC+TGG | + | chr8.2:5555750-5555769 | None:intergenic | 50.0% |
| ACCCAAGCTTGGACAGACAG+CGG | - | chr8.2:5554702-5554721 | MS.gene018355:intron | 55.0% | |
| ACGCCGCATCTTGGTTCAAG+AGG | - | chr8.2:5555791-5555810 | MS.gene018355:CDS | 55.0% | |
| CTTCATAGGCCATCCTGTGC+AGG | - | chr8.2:5556472-5556491 | MS.gene018355:CDS | 55.0% | |
| GGGGTCTCACTCAGGTTCAT+TGG | - | chr8.2:5558976-5558995 | MS.gene018355:intron | 55.0% | |
| GTCTACGCAGTTGTGTGCGA+AGG | - | chr8.2:5554785-5554804 | MS.gene018355:intron | 55.0% | |
| GTGCGGAGCAGTTTCTCAAG+AGG | - | chr8.2:5554565-5554584 | MS.gene018355:intron | 55.0% | |
| TAGGCCATCCTGTGCAGGTA+TGG | - | chr8.2:5556477-5556496 | MS.gene018355:CDS | 55.0% | |
| TCTATTGTCAGACGCTGGCC+TGG | - | chr8.2:5555551-5555570 | MS.gene018355:intron | 55.0% | |
| TCTTGAACCAAGATGCGGCG+TGG | + | chr8.2:5555792-5555811 | None:intergenic | 55.0% | |
| ! | CTATTGTCAGACGCTGGCCT+GGG | - | chr8.2:5555552-5555571 | MS.gene018355:intron | 55.0% |
| ! | GGCACATTCTTTGGGAGGCT+TGG | - | chr8.2:5555595-5555614 | MS.gene018355:intron | 55.0% |
| ! | TCAGGTTCATTGGGAGCGTG+TGG | - | chr8.2:5558986-5559005 | MS.gene018355:intron | 55.0% |
| ! | TTCAGCTAGCCTCTCACCCA+TGG | + | chr8.2:5555370-5555389 | None:intergenic | 55.0% |
| !! | CGCTTGGATTAGTCGGTCCT+TGG | - | chr8.2:5558693-5558712 | MS.gene018355:intron | 55.0% |
| ACCAAGATGCGGCGTGGCAA+AGG | + | chr8.2:5555786-5555805 | None:intergenic | 60.0% | |
| ACCTTTGCCACGCCGCATCT+TGG | - | chr8.2:5555782-5555801 | MS.gene018355:CDS | 60.0% | |
| AGCCGCTGTCTGTCCAAGCT+TGG | + | chr8.2:5554707-5554726 | None:intergenic | 60.0% | |
| GCCGCTGTCTGTCCAAGCTT+GGG | + | chr8.2:5554706-5554725 | None:intergenic | 60.0% | |
| ! | CTCGTGTGGCAGAGGAGCAT+GGG | + | chr8.2:5557415-5557434 | None:intergenic | 60.0% |
| ! | GGGTGAGAGGCTAGCTGAAG+AGG | - | chr8.2:5555371-5555390 | MS.gene018355:intron | 60.0% |
| GCTCGTGTGGCAGAGGAGCA+TGG | + | chr8.2:5557416-5557435 | None:intergenic | 65.0% | |
| ! | CAGAGGAGCATGGGCCTGCA+GGG | + | chr8.2:5557406-5557425 | None:intergenic | 65.0% |
| ! | GCAGAGGAGCATGGGCCTGC+AGG | + | chr8.2:5557407-5557426 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 5554180 | 5559324 | 5554180 | ID=MS.gene018355 |
| chr8.2 | mRNA | 5554180 | 5559324 | 5554180 | ID=MS.gene018355.t1;Parent=MS.gene018355 |
| chr8.2 | exon | 5559062 | 5559324 | 5559062 | ID=MS.gene018355.t1.exon1;Parent=MS.gene018355.t1 |
| chr8.2 | CDS | 5559062 | 5559324 | 5559062 | ID=cds.MS.gene018355.t1;Parent=MS.gene018355.t1 |
| chr8.2 | exon | 5558892 | 5558959 | 5558892 | ID=MS.gene018355.t1.exon2;Parent=MS.gene018355.t1 |
| chr8.2 | CDS | 5558892 | 5558959 | 5558892 | ID=cds.MS.gene018355.t1;Parent=MS.gene018355.t1 |
| chr8.2 | exon | 5558112 | 5558182 | 5558112 | ID=MS.gene018355.t1.exon3;Parent=MS.gene018355.t1 |
| chr8.2 | CDS | 5558112 | 5558182 | 5558112 | ID=cds.MS.gene018355.t1;Parent=MS.gene018355.t1 |
| chr8.2 | exon | 5557681 | 5557959 | 5557681 | ID=MS.gene018355.t1.exon4;Parent=MS.gene018355.t1 |
| chr8.2 | CDS | 5557681 | 5557959 | 5557681 | ID=cds.MS.gene018355.t1;Parent=MS.gene018355.t1 |
| chr8.2 | exon | 5556461 | 5556624 | 5556461 | ID=MS.gene018355.t1.exon5;Parent=MS.gene018355.t1 |
| chr8.2 | CDS | 5556461 | 5556624 | 5556461 | ID=cds.MS.gene018355.t1;Parent=MS.gene018355.t1 |
| chr8.2 | exon | 5556317 | 5556372 | 5556317 | ID=MS.gene018355.t1.exon6;Parent=MS.gene018355.t1 |
| chr8.2 | CDS | 5556317 | 5556372 | 5556317 | ID=cds.MS.gene018355.t1;Parent=MS.gene018355.t1 |
| chr8.2 | exon | 5555914 | 5555966 | 5555914 | ID=MS.gene018355.t1.exon7;Parent=MS.gene018355.t1 |
| chr8.2 | CDS | 5555914 | 5555966 | 5555914 | ID=cds.MS.gene018355.t1;Parent=MS.gene018355.t1 |
| chr8.2 | exon | 5555711 | 5555831 | 5555711 | ID=MS.gene018355.t1.exon8;Parent=MS.gene018355.t1 |
| chr8.2 | CDS | 5555711 | 5555831 | 5555711 | ID=cds.MS.gene018355.t1;Parent=MS.gene018355.t1 |
| chr8.2 | exon | 5554443 | 5554540 | 5554443 | ID=MS.gene018355.t1.exon9;Parent=MS.gene018355.t1 |
| chr8.2 | CDS | 5554443 | 5554540 | 5554443 | ID=cds.MS.gene018355.t1;Parent=MS.gene018355.t1 |
| chr8.2 | exon | 5554180 | 5554251 | 5554180 | ID=MS.gene018355.t1.exon10;Parent=MS.gene018355.t1 |
| chr8.2 | CDS | 5554180 | 5554251 | 5554180 | ID=cds.MS.gene018355.t1;Parent=MS.gene018355.t1 |
| Gene Sequence |
| Protein sequence |
