Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018728.t1 | XP_013449864.1 | 99.3 | 138 | 1 | 0 | 1 | 138 | 1 | 138 | 3.20E-70 | 274.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018728.t1 | P49964 | 68.9 | 132 | 37 | 2 | 7 | 138 | 9 | 136 | 2.1e-46 | 186.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018728.t1 | A0A072U2F6 | 99.3 | 138 | 1 | 0 | 1 | 138 | 1 | 138 | 2.3e-70 | 274.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene018728 | MS.gene61154 | PPI |
| MS.gene034094 | MS.gene018728 | PPI |
| MS.gene018728 | MS.gene75343 | PPI |
| MS.gene018728 | MS.gene026743 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018728.t1 | MTR_7g096570 | 99.275 | 138 | 1 | 0 | 1 | 138 | 1 | 138 | 1.70e-100 | 284 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018728.t1 | AT1G48160 | 70.270 | 111 | 33 | 0 | 1 | 111 | 1 | 111 | 5.30e-57 | 174 |
| MS.gene018728.t1 | AT1G48160 | 70.270 | 111 | 33 | 0 | 1 | 111 | 1 | 111 | 5.30e-57 | 174 |
Find 33 sgRNAs with CRISPR-Local
Find 159 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTCCTTCCATGGTGTTTA+GGG | 0.204157 | 7.1:+11134382 | None:intergenic |
| AACCCTACTTGTGTCGAAAT+TGG | 0.211223 | 7.1:-11136554 | MS.gene018728:CDS |
| TGATGCAGTCTCCTGCTTCT+TGG | 0.227052 | 7.1:+11134362 | None:intergenic |
| TTGGTCCTTCCATGGTGTTT+AGG | 0.258012 | 7.1:+11134381 | None:intergenic |
| TCATGCAAAGAGGACGAGTT+AGG | 0.334941 | 7.1:-11136386 | MS.gene018728:CDS |
| ACCCTACTTGTGTCGAAATT+GGG | 0.338535 | 7.1:-11136553 | MS.gene018728:CDS |
| GCTGGACCTTCCAACAAATC+TGG | 0.347799 | 7.1:-11134324 | MS.gene018728:CDS |
| TCCACCTTTCCCAGATTTGT+TGG | 0.371350 | 7.1:+11134314 | None:intergenic |
| CCTGCTTCTTGGTCCTTCCA+TGG | 0.417818 | 7.1:+11134373 | None:intergenic |
| GTTGCTGAAGGAAGACGAAT+TGG | 0.430316 | 7.1:-11136596 | MS.gene018728:CDS |
| ACGATCCACTTCTTTATGCT+TGG | 0.443869 | 7.1:+11136653 | None:intergenic |
| CCTTTCCCAGATTTGTTGGA+AGG | 0.448852 | 7.1:+11134318 | None:intergenic |
| TCAACAACAACTGCAACTGC+TGG | 0.454659 | 7.1:-11134342 | MS.gene018728:CDS |
| ATTAAACTTACTGGAAGCTA+TGG | 0.462420 | 7.1:+11136323 | None:intergenic |
| CATGCAAAGAGGACGAGTTA+GGG | 0.478286 | 7.1:-11136385 | MS.gene018728:CDS |
| TAATTAACCTCGATTGCAAA+AGG | 0.489985 | 7.1:+11136506 | None:intergenic |
| CTGGACCTTCCAACAAATCT+GGG | 0.500340 | 7.1:-11134323 | MS.gene018728:CDS |
| CCCCAATTTCGACACAAGTA+GGG | 0.516511 | 7.1:+11136552 | None:intergenic |
| CCATGGAAGGACCAAGAAGC+AGG | 0.522661 | 7.1:-11134373 | MS.gene018728:CDS |
| CCCTACTTGTGTCGAAATTG+GGG | 0.523869 | 7.1:-11136552 | MS.gene018728:CDS |
| AATGTTACGCGTTGCAGAGA+TGG | 0.526719 | 7.1:-11134406 | MS.gene018728:CDS |
| AACTTACTGGAAGCTATGGA+TGG | 0.533770 | 7.1:+11136327 | None:intergenic |
| TCCCCAATTTCGACACAAGT+AGG | 0.535068 | 7.1:+11136551 | None:intergenic |
| CCTCGTGATTTCATGCAAAG+AGG | 0.566493 | 7.1:-11136396 | MS.gene018728:CDS |
| TCCAACAAATCTGGGAAAGG+TGG | 0.573312 | 7.1:-11134315 | MS.gene018728:CDS |
| CCTTCCAACAAATCTGGGAA+AGG | 0.605602 | 7.1:-11134318 | MS.gene018728:CDS |
| AATTACCAAGCATAAAGAAG+TGG | 0.608084 | 7.1:-11136658 | MS.gene018728:CDS |
| TTGTTGATCACAGCTTGACA+AGG | 0.619387 | 7.1:-11136424 | MS.gene018728:intron |
| TGGTCCCTAAACACCATGGA+AGG | 0.619588 | 7.1:-11134386 | MS.gene018728:CDS |
| CCTCTTTGCATGAAATCACG+AGG | 0.620436 | 7.1:+11136396 | None:intergenic |
| CAAAGTGTAAGTAAGATGGA+AGG | 0.620681 | 7.1:-11136683 | None:intergenic |
| GAGATGGTCCCTAAACACCA+TGG | 0.690946 | 7.1:-11134390 | MS.gene018728:CDS |
| CTCTTTGCATGAAATCACGA+GGG | 0.694337 | 7.1:+11136397 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAATTATTAGAGAAAAA+GGG | + | chr7.1:11135965-11135984 | None:intergenic | 10.0% |
| !!! | TACTTTTATGTTAAATAAAA+TGG | + | chr7.1:11135235-11135254 | None:intergenic | 10.0% |
| !! | CAATTAATTATTAGAGAAAA+AGG | + | chr7.1:11135966-11135985 | None:intergenic | 15.0% |
| !! | GTTATAATTATTAAACTTAC+TGG | + | chr7.1:11134656-11134675 | None:intergenic | 15.0% |
| !! | TTCTTTCTTAGAAATTAAAT+TGG | - | chr7.1:11135345-11135364 | MS.gene018728:intron | 15.0% |
| !! | AATAAAAAATGCCAAAAACA+TGG | + | chr7.1:11135459-11135478 | None:intergenic | 20.0% |
| !! | AATGGTAAAGGTTAAAAAAT+GGG | - | chr7.1:11135811-11135830 | MS.gene018728:intron | 20.0% |
| !! | AGACCATTATAATATAACAT+TGG | - | chr7.1:11136089-11136108 | MS.gene018728:intron | 20.0% |
| !! | ATTAATTGTAAGATCTGAAA+TGG | - | chr7.1:11135978-11135997 | MS.gene018728:intron | 20.0% |
| !! | TTCGAATATAGAGTTAAAAA+GGG | + | chr7.1:11135504-11135523 | None:intergenic | 20.0% |
| !! | TTTCGAATATAGAGTTAAAA+AGG | + | chr7.1:11135505-11135524 | None:intergenic | 20.0% |
| !!! | AACACATATTTTATGGAAAT+GGG | + | chr7.1:11134877-11134896 | None:intergenic | 20.0% |
| !!! | CTTATAATATTCCACTTTTA+TGG | - | chr7.1:11135104-11135123 | MS.gene018728:intron | 20.0% |
| !!! | CTTTTTATATTTTCTAGACA+CGG | - | chr7.1:11136179-11136198 | MS.gene018728:intron | 20.0% |
| !!! | TTACAAATTCAAGTTGATTA+AGG | - | chr7.1:11135565-11135584 | MS.gene018728:intron | 20.0% |
| !!! | TTATGATAGCTTATTTCTTA+TGG | - | chr7.1:11136363-11136382 | MS.gene018728:CDS | 20.0% |
| ! | AAAAGAATAGCATAATCTTG+TGG | + | chr7.1:11136066-11136085 | None:intergenic | 25.0% |
| ! | AAGATATCAAAGTAATGTTG+TGG | + | chr7.1:11134904-11134923 | None:intergenic | 25.0% |
| ! | AATATAGTTCTTAGCTATCT+GGG | - | chr7.1:11134721-11134740 | MS.gene018728:intron | 25.0% |
| ! | AGACCATGATAATATAACAT+TGG | - | chr7.1:11136040-11136059 | MS.gene018728:intron | 25.0% |
| ! | AGTTACAAAATTGACATACA+TGG | + | chr7.1:11135864-11135883 | None:intergenic | 25.0% |
| ! | ATAATTGTTATGATTTCCAG+CGG | + | chr7.1:11136303-11136322 | None:intergenic | 25.0% |
| ! | GAATGGTAAAGGTTAAAAAA+TGG | - | chr7.1:11135810-11135829 | MS.gene018728:intron | 25.0% |
| ! | TAATATAGTTCTTAGCTATC+TGG | - | chr7.1:11134720-11134739 | MS.gene018728:intron | 25.0% |
| ! | TGGCCAATGTTATATTATAA+TGG | + | chr7.1:11136095-11136114 | None:intergenic | 25.0% |
| ! | TTCATAATGTTACATGCATA+AGG | + | chr7.1:11135405-11135424 | None:intergenic | 25.0% |
| !! | ACACATATTTTATGGAAATG+GGG | + | chr7.1:11134876-11134895 | None:intergenic | 25.0% |
| !! | ACATTGATTATACTTTCTAC+CGG | - | chr7.1:11135076-11135095 | MS.gene018728:intron | 25.0% |
| !! | GAACACATATTTTATGGAAA+TGG | + | chr7.1:11134878-11134897 | None:intergenic | 25.0% |
| !! | TGGTTAGAACACATATTTTA+TGG | + | chr7.1:11134884-11134903 | None:intergenic | 25.0% |
| !!! | AACTACTTTAGAGTTTGATA+AGG | + | chr7.1:11136004-11136023 | None:intergenic | 25.0% |
| !!! | AATTAATGATTTGCTCACAT+AGG | - | chr7.1:11135271-11135290 | MS.gene018728:intron | 25.0% |
| !!! | TTTTGGAATTGATGTAAACA+GGG | + | chr7.1:11134346-11134365 | None:intergenic | 25.0% |
| !!! | TTTTGTTTTTATGTCTTTGC+AGG | - | chr7.1:11136529-11136548 | MS.gene018728:CDS | 25.0% |
| !!! | TTTTTGGAATTGATGTAAAC+AGG | + | chr7.1:11134347-11134366 | None:intergenic | 25.0% |
| AAAGCACAAATTGAAGAAGT+AGG | - | chr7.1:11135625-11135644 | MS.gene018728:intron | 30.0% | |
| AATATCATAGATGATCTCTC+TGG | + | chr7.1:11136338-11136357 | None:intergenic | 30.0% | |
| AATGTTACATGCATAAGGTA+TGG | + | chr7.1:11135400-11135419 | None:intergenic | 30.0% | |
| AATTACCAAGCATAAAGAAG+TGG | - | chr7.1:11134309-11134328 | MS.gene018728:CDS | 30.0% | |
| ATGTTAATAACTCACAACAG+AGG | - | chr7.1:11135668-11135687 | MS.gene018728:intron | 30.0% | |
| ATTAAACTTACTGGAAGCTA+TGG | + | chr7.1:11134647-11134666 | None:intergenic | 30.0% | |
| CCAACTATCTAAATACCATA+AGG | + | chr7.1:11134775-11134794 | None:intergenic | 30.0% | |
| CCTTATGGTATTTAGATAGT+TGG | - | chr7.1:11134772-11134791 | MS.gene018728:intron | 30.0% | |
| CTAAATCCTATAATTTCTGC+AGG | + | chr7.1:11136214-11136233 | None:intergenic | 30.0% | |
| CTGCAGAAATTATAGGATTT+AGG | - | chr7.1:11136212-11136231 | MS.gene018728:intron | 30.0% | |
| TAATTAACCTCGATTGCAAA+AGG | + | chr7.1:11134464-11134483 | None:intergenic | 30.0% | |
| TAATTGTTATGATTTCCAGC+GGG | + | chr7.1:11136302-11136321 | None:intergenic | 30.0% | |
| TCACTTATAAGTTCCAATTG+TGG | - | chr7.1:11135156-11135175 | MS.gene018728:intron | 30.0% | |
| TGCAAGCATCACATATTAAA+AGG | - | chr7.1:11136422-11136441 | MS.gene018728:intron | 30.0% | |
| TGGAATATTATAAGTAGTGC+CGG | + | chr7.1:11135098-11135117 | None:intergenic | 30.0% | |
| TGGCCAATGTTATATTATCA+TGG | + | chr7.1:11136046-11136065 | None:intergenic | 30.0% | |
| TGTTAATAACTCACAACAGA+GGG | - | chr7.1:11135669-11135688 | MS.gene018728:intron | 30.0% | |
| TTATAAGTTCCAATTGTGGA+TGG | - | chr7.1:11135160-11135179 | MS.gene018728:intron | 30.0% | |
| TTCTTCTTAGAGAATGGTAA+AGG | - | chr7.1:11135799-11135818 | MS.gene018728:intron | 30.0% | |
| TTGATATGACAAAGTGATAC+TGG | - | chr7.1:11135009-11135028 | MS.gene018728:intron | 30.0% | |
| TTTAAGCCTGCAGAAATTAT+AGG | - | chr7.1:11136205-11136224 | MS.gene018728:intron | 30.0% | |
| ! | GTGTTTTTCTTCTTAGAGAA+TGG | - | chr7.1:11135793-11135812 | MS.gene018728:intron | 30.0% |
| !! | ATGCCACTTTAGTTAAAACA+AGG | + | chr7.1:11135599-11135618 | None:intergenic | 30.0% |
| !!! | CTCCAATATTTTGACTGTTT+AGG | - | chr7.1:11135530-11135549 | MS.gene018728:intron | 30.0% |
| !!! | GTACCTTGTTTTAACTAAAG+TGG | - | chr7.1:11135593-11135612 | MS.gene018728:intron | 30.0% |
| !!! | GTTAGACTTTTGTTTCTGTT+CGG | - | chr7.1:11135209-11135228 | MS.gene018728:intron | 30.0% |
| ATTATAGGATTTAGGCAGAG+AGG | - | chr7.1:11136220-11136239 | MS.gene018728:intron | 35.0% | |
| GATCAACATAGAAGATACGT+AGG | - | chr7.1:11135429-11135448 | MS.gene018728:intron | 35.0% | |
| GGCCTAAACAGTCAAAATAT+TGG | + | chr7.1:11135535-11135554 | None:intergenic | 35.0% | |
| TTATAGGATTTAGGCAGAGA+GGG | - | chr7.1:11136221-11136240 | MS.gene018728:intron | 35.0% | |
| TTGTATCATCTGATTAGCAC+TGG | - | chr7.1:11134748-11134767 | MS.gene018728:intron | 35.0% | |
| ! | AGTTAGGGTTTTGCTCAAAA+AGG | - | chr7.1:11134597-11134616 | MS.gene018728:intron | 35.0% |
| ! | CATATTTTATGGAAATGGGG+TGG | + | chr7.1:11134873-11134892 | None:intergenic | 35.0% |
| ! | GTAAAACTAGTTTGCACTGA+CGG | - | chr7.1:11135932-11135951 | MS.gene018728:intron | 35.0% |
| ! | TAAACTTCCTTTTGCAATCG+AGG | - | chr7.1:11134454-11134473 | MS.gene018728:intron | 35.0% |
| ! | TTAAGTTGTCAGTAACTCAG+TGG | + | chr7.1:11134967-11134986 | None:intergenic | 35.0% |
| ! | TTTTGCTCAAAAAGGAGGAT+GGG | - | chr7.1:11134605-11134624 | MS.gene018728:intron | 35.0% |
| !! | AAGTGATACTGGCTTTAAGT+TGG | - | chr7.1:11135020-11135039 | MS.gene018728:intron | 35.0% |
| !! | AGTGATACTGGCTTTAAGTT+GGG | - | chr7.1:11135021-11135040 | MS.gene018728:intron | 35.0% |
| !! | ATATTCCACTTTTATGGCTC+TGG | - | chr7.1:11135110-11135129 | MS.gene018728:intron | 35.0% |
| !! | TGAATTTGTAAAAGTGCCAC+TGG | + | chr7.1:11135556-11135575 | None:intergenic | 35.0% |
| AACCCTACTTGTGTCGAAAT+TGG | - | chr7.1:11134413-11134432 | MS.gene018728:CDS | 40.0% | |
| AACTTACTGGAAGCTATGGA+TGG | + | chr7.1:11134643-11134662 | None:intergenic | 40.0% | |
| ACCCTACTTGTGTCGAAATT+GGG | - | chr7.1:11134414-11134433 | MS.gene018728:CDS | 40.0% | |
| ACGATCCACTTCTTTATGCT+TGG | + | chr7.1:11134317-11134336 | None:intergenic | 40.0% | |
| ATAGATGATCTCTCTGGTGT+GGG | + | chr7.1:11136332-11136351 | None:intergenic | 40.0% | |
| CTATCATTCCTTGTCTAAGC+CGG | - | chr7.1:11134844-11134863 | MS.gene018728:intron | 40.0% | |
| CTCTTTGCATGAAATCACGA+GGG | + | chr7.1:11134573-11134592 | None:intergenic | 40.0% | |
| TATAGGATTTAGGCAGAGAG+GGG | - | chr7.1:11136222-11136241 | MS.gene018728:intron | 40.0% | |
| TCCAAAAAGACTGTTGCTGA+AGG | - | chr7.1:11134359-11134378 | MS.gene018728:CDS | 40.0% | |
| TTAAATTGGATCCCAAGACC+AGG | - | chr7.1:11135359-11135378 | MS.gene018728:intron | 40.0% | |
| TTGTTGATCACAGCTTGACA+AGG | - | chr7.1:11134543-11134562 | MS.gene018728:intron | 40.0% | |
| ! | ACGTAGGAACTCCATGTTTT+TGG | - | chr7.1:11135445-11135464 | MS.gene018728:intron | 40.0% |
| ! | AGTAGGGTTTTCGCATGATT+TGG | + | chr7.1:11134402-11134421 | None:intergenic | 40.0% |
| ! | GTTTTGCTCAAAAAGGAGGA+TGG | - | chr7.1:11134604-11134623 | MS.gene018728:intron | 40.0% |
| ! | TAGGGTTTTGCTCAAAAAGG+AGG | - | chr7.1:11134600-11134619 | MS.gene018728:intron | 40.0% |
| ! | TCCTTCAGCAACAGTCTTTT+TGG | + | chr7.1:11134363-11134382 | None:intergenic | 40.0% |
| !!! | ATTTTGACTGTTTAGGCCAG+TGG | - | chr7.1:11135537-11135556 | MS.gene018728:intron | 40.0% |
| AATGTTACGCGTTGCAGAGA+TGG | - | chr7.1:11136561-11136580 | MS.gene018728:CDS | 45.0% | |
| ACTCGAAGTCCATCCACAAT+TGG | + | chr7.1:11135172-11135191 | None:intergenic | 45.0% | |
| ATAGGATTTAGGCAGAGAGG+GGG | - | chr7.1:11136223-11136242 | MS.gene018728:intron | 45.0% | |
| CATAGATGATCTCTCTGGTG+TGG | + | chr7.1:11136333-11136352 | None:intergenic | 45.0% | |
| CATGCAAAGAGGACGAGTTA+GGG | - | chr7.1:11134582-11134601 | MS.gene018728:intron | 45.0% | |
| CCCCAATTTCGACACAAGTA+GGG | + | chr7.1:11134418-11134437 | None:intergenic | 45.0% | |
| CCCTACTTGTGTCGAAATTG+GGG | - | chr7.1:11134415-11134434 | MS.gene018728:CDS | 45.0% | |
| CCTCGTGATTTCATGCAAAG+AGG | - | chr7.1:11134571-11134590 | MS.gene018728:intron | 45.0% | |
| CCTCTTTGCATGAAATCACG+AGG | + | chr7.1:11134574-11134593 | None:intergenic | 45.0% | |
| CCTTCCAACAAATCTGGGAA+AGG | - | chr7.1:11136649-11136668 | MS.gene018728:CDS | 45.0% | |
| CTGGACCTTCCAACAAATCT+GGG | - | chr7.1:11136644-11136663 | MS.gene018728:CDS | 45.0% | |
| GACATACATGGCAAGATGAC+AGG | + | chr7.1:11135852-11135871 | None:intergenic | 45.0% | |
| GTTGCTGAAGGAAGACGAAT+TGG | - | chr7.1:11134371-11134390 | MS.gene018728:CDS | 45.0% | |
| TCAACAACAACTGCAACTGC+TGG | - | chr7.1:11136625-11136644 | MS.gene018728:CDS | 45.0% | |
| TCATGCAAAGAGGACGAGTT+AGG | - | chr7.1:11134581-11134600 | MS.gene018728:intron | 45.0% | |
| TCCAACAAATCTGGGAAAGG+TGG | - | chr7.1:11136652-11136671 | MS.gene018728:CDS | 45.0% | |
| TCCACCTTTCCCAGATTTGT+TGG | + | chr7.1:11136656-11136675 | None:intergenic | 45.0% | |
| TCCCCAATTTCGACACAAGT+AGG | + | chr7.1:11134419-11134438 | None:intergenic | 45.0% | |
| TGAGTCCAGAGCCATAAAAG+TGG | + | chr7.1:11135118-11135137 | None:intergenic | 45.0% | |
| TGGTCCTTCCATGGTGTTTA+GGG | + | chr7.1:11136588-11136607 | None:intergenic | 45.0% | |
| TTGGTCCTTCCATGGTGTTT+AGG | + | chr7.1:11136589-11136608 | None:intergenic | 45.0% | |
| ! | ACTCAACACTGGATTGGAAC+TGG | - | chr7.1:11135133-11135152 | MS.gene018728:intron | 45.0% |
| ! | CTGATTAGCACTGGACCTTA+TGG | - | chr7.1:11134757-11134776 | MS.gene018728:intron | 45.0% |
| ! | GGATGGACTTCGAGTAGAAT+TGG | - | chr7.1:11135177-11135196 | MS.gene018728:intron | 45.0% |
| ! | TCTTCTCCATTCCTGGTCTT+GGG | + | chr7.1:11135373-11135392 | None:intergenic | 45.0% |
| !! | CCTTTCCCAGATTTGTTGGA+AGG | + | chr7.1:11136652-11136671 | None:intergenic | 45.0% |
| CTCTGGACTCAACACTGGAT+TGG | - | chr7.1:11135127-11135146 | MS.gene018728:intron | 50.0% | |
| CTCTTCTCCATTCCTGGTCT+TGG | + | chr7.1:11135374-11135393 | None:intergenic | 50.0% | |
| GAGATGGTCCCTAAACACCA+TGG | - | chr7.1:11136577-11136596 | MS.gene018728:CDS | 50.0% | |
| GCTGGACCTTCCAACAAATC+TGG | - | chr7.1:11136643-11136662 | MS.gene018728:CDS | 50.0% | |
| TAGGATTTAGGCAGAGAGGG+GGG | - | chr7.1:11136224-11136243 | MS.gene018728:intron | 50.0% | |
| TCATTCCTTGTCTAAGCCGG+AGG | - | chr7.1:11134847-11134866 | MS.gene018728:intron | 50.0% | |
| TGATGCAGTCTCCTGCTTCT+TGG | + | chr7.1:11136608-11136627 | None:intergenic | 50.0% | |
| TGGTCCCTAAACACCATGGA+AGG | - | chr7.1:11136581-11136600 | MS.gene018728:CDS | 50.0% | |
| TTGGATCCCAAGACCAGGAA+TGG | - | chr7.1:11135364-11135383 | MS.gene018728:intron | 50.0% | |
| !! | TATGGCTCTGGACTCAACAC+TGG | - | chr7.1:11135122-11135141 | MS.gene018728:intron | 50.0% |
| ACCAACGTCAGCATCAGGGT+CGG | + | chr7.1:11134930-11134949 | None:intergenic | 55.0% | |
| ACCCTGATGCTGACGTTGGT+TGG | - | chr7.1:11134930-11134949 | MS.gene018728:intron | 55.0% | |
| ATTTAGGCAGAGAGGGGGGA+GGG | - | chr7.1:11136228-11136247 | MS.gene018728:intron | 55.0% | |
| ATTTCCAGCGGGACGTCTTC+CGG | + | chr7.1:11136291-11136310 | None:intergenic | 55.0% | |
| CCATGGAAGGACCAAGAAGC+AGG | - | chr7.1:11136594-11136613 | MS.gene018728:CDS | 55.0% | |
| CCTGCTTCTTGGTCCTTCCA+TGG | + | chr7.1:11136597-11136616 | None:intergenic | 55.0% | |
| GCCAACCAACGTCAGCATCA+GGG | + | chr7.1:11134934-11134953 | None:intergenic | 55.0% | |
| TATGGAAATGGGGTGGCCTC+CGG | + | chr7.1:11134866-11134885 | None:intergenic | 55.0% | |
| TGGCTGCTCTTCTCCATTCC+TGG | + | chr7.1:11135380-11135399 | None:intergenic | 55.0% | |
| CGCCAACCAACGTCAGCATC+AGG | + | chr7.1:11134935-11134954 | None:intergenic | 60.0% | |
| GATTTAGGCAGAGAGGGGGG+AGG | - | chr7.1:11136227-11136246 | MS.gene018728:intron | 60.0% | |
| TCCGACCCTGATGCTGACGT+TGG | - | chr7.1:11134926-11134945 | MS.gene018728:intron | 60.0% | |
| TTTAGGCAGAGAGGGGGGAG+GGG | - | chr7.1:11136229-11136248 | MS.gene018728:intron | 60.0% | |
| GGAGGGAGGGCTTCGTTCAC+CGG | - | chr7.1:11136269-11136288 | MS.gene018728:intron | 65.0% | |
| GGTGGCCTCCGGCTTAGACA+AGG | + | chr7.1:11134855-11134874 | None:intergenic | 65.0% | |
| TTAGGCAGAGAGGGGGGAGG+GGG | - | chr7.1:11136230-11136249 | MS.gene018728:intron | 65.0% | |
| TTCACCGGAAGACGTCCCGC+TGG | - | chr7.1:11136284-11136303 | MS.gene018728:intron | 65.0% | |
| TAGGCAGAGAGGGGGGAGGG+GGG | - | chr7.1:11136231-11136250 | MS.gene018728:intron | 70.0% | |
| AGAGAGGGGGGAGGGGGGGA+GGG | - | chr7.1:11136236-11136255 | MS.gene018728:intron | 75.0% | |
| AGGCAGAGAGGGGGGAGGGG+GGG | - | chr7.1:11136232-11136251 | MS.gene018728:intron | 75.0% | |
| AGGGAGGGAGGGAGGGAGGG+AGG | - | chr7.1:11136255-11136274 | MS.gene018728:intron | 75.0% | |
| GGGAGGGAGGGAGGGAGGGA+GGG | - | chr7.1:11136252-11136271 | MS.gene018728:intron | 75.0% | |
| ! | AGGGGGGAGGGGGGGAGGGA+GGG | - | chr7.1:11136240-11136259 | MS.gene018728:intron | 80.0% |
| ! | AGGGGGGGAGGGAGGGAGGG+AGG | - | chr7.1:11136247-11136266 | MS.gene018728:intron | 80.0% |
| ! | CAGAGAGGGGGGAGGGGGGG+AGG | - | chr7.1:11136235-11136254 | MS.gene018728:intron | 80.0% |
| ! | GGGAGGGGGGGAGGGAGGGA+GGG | - | chr7.1:11136244-11136263 | MS.gene018728:intron | 80.0% |
| ! | GGGGAGGGAGGGAGGGAGGG+AGG | - | chr7.1:11136251-11136270 | MS.gene018728:intron | 80.0% |
| ! | GGGGGGGAGGGAGGGAGGGA+GGG | - | chr7.1:11136248-11136267 | MS.gene018728:intron | 80.0% |
| ! | GAGGGGGGAGGGGGGGAGGG+AGG | - | chr7.1:11136239-11136258 | MS.gene018728:intron | 85.0% |
| ! | GGGGAGGGGGGGAGGGAGGG+AGG | - | chr7.1:11136243-11136262 | MS.gene018728:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 11134299 | 11136690 | 11134299 | ID=MS.gene018728 |
| chr7.1 | mRNA | 11134299 | 11136690 | 11134299 | ID=MS.gene018728.t1;Parent=MS.gene018728 |
| chr7.1 | exon | 11136514 | 11136690 | 11136514 | ID=MS.gene018728.t1.exon1;Parent=MS.gene018728.t1 |
| chr7.1 | CDS | 11136514 | 11136690 | 11136514 | ID=cds.MS.gene018728.t1;Parent=MS.gene018728.t1 |
| chr7.1 | exon | 11136334 | 11136433 | 11136334 | ID=MS.gene018728.t1.exon2;Parent=MS.gene018728.t1 |
| chr7.1 | CDS | 11136334 | 11136433 | 11136334 | ID=cds.MS.gene018728.t1;Parent=MS.gene018728.t1 |
| chr7.1 | exon | 11134299 | 11134438 | 11134299 | ID=MS.gene018728.t1.exon3;Parent=MS.gene018728.t1 |
| chr7.1 | CDS | 11134299 | 11134438 | 11134299 | ID=cds.MS.gene018728.t1;Parent=MS.gene018728.t1 |
| Gene Sequence |
| Protein sequence |
