Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019628.t1 | XP_013444836.1 | 97.3 | 438 | 12 | 0 | 1 | 438 | 1 | 438 | 5.70E-230 | 806.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019628.t1 | Q8NCG7 | 28.2 | 170 | 97 | 6 | 96 | 253 | 357 | 513 | 1.1e-08 | 62.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019628.t1 | A0A072TNX6 | 97.3 | 438 | 12 | 0 | 1 | 438 | 1 | 438 | 4.1e-230 | 806.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene019628 | MS.gene006275 | PPI |
| MS.gene019628 | MS.gene34148 | PPI |
| MS.gene49110 | MS.gene019628 | PPI |
| MS.gene061165 | MS.gene019628 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019628.t1 | MTR_8g030890 | 97.260 | 438 | 12 | 0 | 1 | 438 | 1 | 438 | 0.0 | 889 |
| MS.gene019628.t1 | MTR_1g100950 | 67.882 | 439 | 138 | 3 | 1 | 437 | 41 | 478 | 0.0 | 614 |
| MS.gene019628.t1 | MTR_1g100950 | 67.882 | 439 | 138 | 3 | 1 | 437 | 1 | 438 | 0.0 | 613 |
| MS.gene019628.t1 | MTR_1g100950 | 73.487 | 347 | 91 | 1 | 1 | 346 | 1 | 347 | 0.0 | 536 |
| MS.gene019628.t1 | MTR_3g065480 | 53.604 | 444 | 189 | 8 | 1 | 434 | 1 | 437 | 2.46e-168 | 481 |
| MS.gene019628.t1 | MTR_1g100950 | 69.328 | 238 | 72 | 1 | 1 | 237 | 1 | 238 | 4.56e-127 | 368 |
| MS.gene019628.t1 | MTR_1g070195 | 27.650 | 217 | 141 | 7 | 40 | 244 | 164 | 376 | 2.87e-13 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019628.t1 | AT4G00500 | 66.213 | 441 | 145 | 3 | 1 | 438 | 1 | 440 | 0.0 | 597 |
| MS.gene019628.t1 | AT4G00500 | 66.213 | 441 | 145 | 3 | 1 | 438 | 1 | 440 | 0.0 | 597 |
| MS.gene019628.t1 | AT3G49050 | 66.500 | 400 | 131 | 3 | 1 | 397 | 1 | 400 | 0.0 | 583 |
| MS.gene019628.t1 | AT5G37710 | 53.075 | 439 | 182 | 7 | 1 | 433 | 1 | 421 | 4.93e-162 | 464 |
| MS.gene019628.t1 | AT5G37710 | 60.057 | 348 | 133 | 4 | 1 | 345 | 1 | 345 | 2.47e-150 | 431 |
| MS.gene019628.t1 | AT2G42450 | 29.139 | 151 | 101 | 3 | 97 | 244 | 231 | 378 | 3.36e-15 | 78.2 |
| MS.gene019628.t1 | AT4G16070 | 26.203 | 187 | 123 | 7 | 70 | 255 | 160 | 332 | 4.98e-12 | 68.6 |
| MS.gene019628.t1 | AT4G16070 | 27.647 | 170 | 109 | 6 | 70 | 239 | 160 | 315 | 2.06e-11 | 66.6 |
Find 123 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTCATAATCGTGACAAAT+TGG | 0.219952 | 8.1:+72001776 | MS.gene019628:CDS |
| CATGGTGGATATGTTCATAA+TGG | 0.280337 | 8.1:+72001612 | MS.gene019628:CDS |
| ATTGTGTCTCATGTGCTTAA+AGG | 0.289797 | 8.1:+72003178 | MS.gene019628:CDS |
| ACTTGAGTGTGTTTATTGTC+TGG | 0.305050 | 8.1:+72001230 | MS.gene019628:CDS |
| CAGGCTACGAGAGTGAAAAT+TGG | 0.311287 | 8.1:+72001292 | MS.gene019628:CDS |
| CCGATGTATGTCTCTCAATT+TGG | 0.330984 | 8.1:+72001842 | MS.gene019628:CDS |
| GAAGATTTCCACCCATTGTT+AGG | 0.336238 | 8.1:+72004246 | MS.gene019628:CDS |
| GCTAGAGAAAGATCGGAATA+TGG | 0.341114 | 8.1:+72005345 | MS.gene019628:CDS |
| AACTTATATGTTGACGTTCA+TGG | 0.343834 | 8.1:+72001707 | MS.gene019628:CDS |
| ATGGGACATTCACTTGGTGC+TGG | 0.347368 | 8.1:+72001726 | MS.gene019628:CDS |
| CTTCATAATCGTGACAAATT+GGG | 0.358051 | 8.1:+72001777 | MS.gene019628:CDS |
| ATTGACGCTGAGGAAGATTC+TGG | 0.367509 | 8.1:+72005511 | MS.gene019628:CDS |
| TTGTCGAGCGAAAGCCCTTC+AGG | 0.380817 | 8.1:+72003273 | MS.gene019628:CDS |
| TGGGACATTCACTTGGTGCT+GGG | 0.381849 | 8.1:+72001727 | MS.gene019628:CDS |
| TTGTCTTGCGGAAGGATTAC+GGG | 0.385981 | 8.1:+72001445 | MS.gene019628:CDS |
| ATGGTGGATATGTTCATAAT+GGG | 0.386158 | 8.1:+72001613 | MS.gene019628:CDS |
| CCTTCGGAGGGCAGTTGCTT+TGG | 0.387374 | 8.1:+72005441 | MS.gene019628:CDS |
| CTACTGACCATGCCATCCTT+TGG | 0.397629 | 8.1:+72004324 | MS.gene019628:CDS |
| GTGCGACAAATTCGTGGTAT+AGG | 0.400706 | 8.1:-72001342 | None:intergenic |
| AGGCTACGAGAGTGAAAATT+GGG | 0.404759 | 8.1:+72001293 | MS.gene019628:CDS |
| GCATACTCACCTTCCTCATA+TGG | 0.405824 | 8.1:+72005475 | MS.gene019628:CDS |
| GTTATTGAAGGCAGCGGATT+GGG | 0.408048 | 8.1:+72001635 | MS.gene019628:CDS |
| CTTGAGTGTGTTTATTGTCT+GGG | 0.413771 | 8.1:+72001231 | MS.gene019628:CDS |
| ATTGTCTGGGTTGTACTCGT+TGG | 0.414145 | 8.1:+72001244 | MS.gene019628:CDS |
| GAAATTATACTGGCTGTTAG+TGG | 0.416596 | 8.1:+72001522 | MS.gene019628:CDS |
| TTCATGAAATGTTCCATATG+AGG | 0.417496 | 8.1:-72005488 | None:intergenic |
| GTTATGGTATTAATCCTGAT+TGG | 0.417557 | 8.1:+72001421 | MS.gene019628:CDS |
| TTGTCTGGGTTGTACTCGTT+GGG | 0.421207 | 8.1:+72001245 | MS.gene019628:CDS |
| CATTGATGTCATTTATCTGT+GGG | 0.426287 | 8.1:+72001199 | None:intergenic |
| TGGGTTGTACTCGTTGGGCT+TGG | 0.426664 | 8.1:+72001250 | MS.gene019628:CDS |
| TGGGCTCCCGAAGGTGGTTA+TGG | 0.429960 | 8.1:+72001405 | MS.gene019628:CDS |
| TTCACTTGGTGCTGGGGTGG+TGG | 0.432423 | 8.1:+72001734 | MS.gene019628:CDS |
| ACCTCGGACAACCACTGCTC+TGG | 0.435017 | 8.1:+72002115 | MS.gene019628:CDS |
| CATACAGACGCCTTGGGTCT+CGG | 0.436571 | 8.1:-72003229 | None:intergenic |
| CTTGGACAAACGGAATTTCA+TGG | 0.437460 | 8.1:+72001594 | MS.gene019628:CDS |
| ATTAATACCATAACCACCTT+CGG | 0.441320 | 8.1:-72001412 | None:intergenic |
| TGATCGTTCGGAAATTATAC+TGG | 0.443999 | 8.1:+72001512 | MS.gene019628:CDS |
| ACTTATATGTTGACGTTCAT+GGG | 0.445690 | 8.1:+72001708 | MS.gene019628:CDS |
| ATTGTCTTGCGGAAGGATTA+CGG | 0.453840 | 8.1:+72001444 | MS.gene019628:CDS |
| CAATAAACACACTCAAGTAT+AGG | 0.464088 | 8.1:-72001225 | None:intergenic |
| CGGCAGAGCAAAAGATGGTT+AGG | 0.467187 | 8.1:+72005374 | MS.gene019628:CDS |
| TGATAACAAGCTTGGACAAA+CGG | 0.478078 | 8.1:+72001584 | MS.gene019628:CDS |
| CAAACTCTTCTGCAGTAGCT+AGG | 0.481650 | 8.1:-72001317 | None:intergenic |
| ACATTCACTTGGTGCTGGGG+TGG | 0.482845 | 8.1:+72001731 | MS.gene019628:CDS |
| GCTTACATCGAGAGCCCGTT+GGG | 0.485898 | 8.1:-72004360 | None:intergenic |
| TTAATACCATAACCACCTTC+GGG | 0.486343 | 8.1:-72001411 | None:intergenic |
| ATAACAAACGATCAGAAAGT+TGG | 0.487511 | 8.1:+72005566 | MS.gene019628:CDS |
| ATACCTTGATCATGATCGTT+CGG | 0.489378 | 8.1:+72001500 | MS.gene019628:CDS |
| GGGACATTCACTTGGTGCTG+GGG | 0.490777 | 8.1:+72001728 | MS.gene019628:CDS |
| ATGAACGTCAACATATAAGT+TGG | 0.492452 | 8.1:-72001705 | None:intergenic |
| GGTTATTGAAGGCAGCGGAT+TGG | 0.493396 | 8.1:+72001634 | MS.gene019628:CDS |
| AGATCGGAATATGGAGATCC+CGG | 0.498672 | 8.1:+72005354 | MS.gene019628:CDS |
| TTCCGCAAGACAATCCAATC+AGG | 0.503167 | 8.1:-72001435 | None:intergenic |
| TGTTCATAATGGGTTATTGA+AGG | 0.504548 | 8.1:+72001623 | MS.gene019628:CDS |
| GAAAGTTGGAATGAATTTGT+CGG | 0.506851 | 8.1:+72005580 | MS.gene019628:CDS |
| GATTGAGAAGGAATCCCAAC+GGG | 0.509870 | 8.1:+72004346 | MS.gene019628:CDS |
| AAGAGTACCGTGCAGCCCTT+CGG | 0.515446 | 8.1:+72005425 | MS.gene019628:CDS |
| CCAGGTGCATACAGACGCCT+TGG | 0.522285 | 8.1:-72003236 | None:intergenic |
| GGTACTGCTGTCCTAACAAT+GGG | 0.534930 | 8.1:-72004257 | None:intergenic |
| TTTCCGAACGATCATGATCA+AGG | 0.536303 | 8.1:-72001503 | None:intergenic |
| TTCATAATCGTGACAAATTG+GGG | 0.542429 | 8.1:+72001778 | MS.gene019628:CDS |
| GATCAACTCTATCGTACTAC+AGG | 0.545783 | 8.1:+72001884 | MS.gene019628:CDS |
| AGCTTACATCGAGAGCCCGT+TGG | 0.546689 | 8.1:-72004361 | None:intergenic |
| ACGTTCATGGGACATTCACT+TGG | 0.548540 | 8.1:+72001720 | MS.gene019628:CDS |
| AACCCTCAGTGGGCTCCCGA+AGG | 0.550074 | 8.1:+72001396 | MS.gene019628:CDS |
| AGTTAATGCTAGAGAAAGAT+CGG | 0.550817 | 8.1:+72005338 | MS.gene019628:intron |
| CTGCCCTCCGAAGGGCTGCA+CGG | 0.552923 | 8.1:-72005432 | None:intergenic |
| CAGGTGCATACAGACGCCTT+GGG | 0.556377 | 8.1:-72003235 | None:intergenic |
| AGTACCGTGCAGCCCTTCGG+AGG | 0.557733 | 8.1:+72005428 | MS.gene019628:CDS |
| AAGATTGTGCGACAAATTCG+TGG | 0.558185 | 8.1:-72001348 | None:intergenic |
| CATACATCGGGCAGGAGCAA+TGG | 0.558494 | 8.1:-72001829 | None:intergenic |
| TGATCAAGGTATATCATGTA+CGG | 0.559156 | 8.1:-72001489 | None:intergenic |
| GCATTGATGTCATTTATCTG+TGG | 0.559899 | 8.1:+72001198 | None:intergenic |
| TGATTGGATTGTCTTGCGGA+AGG | 0.561618 | 8.1:+72001437 | MS.gene019628:CDS |
| TGCCATCCTTTGGATTGAGA+AGG | 0.562134 | 8.1:+72004334 | MS.gene019628:CDS |
| ATGCGGAATGGGAGGTTCTG+AGG | 0.566241 | 8.1:+72001664 | MS.gene019628:CDS |
| TGATCAAACCTTCCATCGAC+AGG | 0.566884 | 8.1:-72004278 | None:intergenic |
| CCAAAGCAACTGCCCTCCGA+AGG | 0.567097 | 8.1:-72005441 | None:intergenic |
| CCAAGGCGTCTGTATGCACC+TGG | 0.569450 | 8.1:+72003236 | MS.gene019628:CDS |
| TAATGGGTTATTGAAGGCAG+CGG | 0.572333 | 8.1:+72001629 | MS.gene019628:CDS |
| CTTAAAGGATACTTGCACAC+TGG | 0.573680 | 8.1:+72003193 | MS.gene019628:CDS |
| TTCCTTCTCAATCCAAAGGA+TGG | 0.575356 | 8.1:-72004336 | None:intergenic |
| ATCCTGATTGGATTGTCTTG+CGG | 0.575742 | 8.1:+72001433 | MS.gene019628:CDS |
| GGGATTCCTTCTCAATCCAA+AGG | 0.576786 | 8.1:-72004340 | None:intergenic |
| TTGAGAGACATACATCGGGC+AGG | 0.577619 | 8.1:-72001837 | None:intergenic |
| CACCTTCGGGAGCCCACTGA+GGG | 0.581961 | 8.1:-72001398 | None:intergenic |
| CAAATTGAGAGACATACATC+GGG | 0.583019 | 8.1:-72001841 | None:intergenic |
| GAGGAAGGTGAGTATGCTTG+AGG | 0.590075 | 8.1:-72005469 | None:intergenic |
| CCTCAGTGGGCTCCCGAAGG+TGG | 0.591112 | 8.1:+72001399 | MS.gene019628:CDS |
| GAAGATTCTGGAAGATCTAG+TGG | 0.592068 | 8.1:+72005523 | MS.gene019628:CDS |
| CAAAGCAACTGCCCTCCGAA+GGG | 0.592141 | 8.1:-72005440 | None:intergenic |
| AGGTACTGCTGTCCTAACAA+TGG | 0.595170 | 8.1:-72004258 | None:intergenic |
| TGATCGTTTGTTATGAGACA+AGG | 0.595396 | 8.1:-72005557 | None:intergenic |
| TGTCGGACGCATGTTTGACG+TGG | 0.597332 | 8.1:+72005597 | MS.gene019628:CDS |
| TAGTGGACTCAATTTAGCAA+AGG | 0.598653 | 8.1:+72001539 | MS.gene019628:CDS |
| TCTCAATCCAAAGGATGGCA+TGG | 0.607183 | 8.1:-72004331 | None:intergenic |
| ATGATATTCGTAACCCTCAG+TGG | 0.608150 | 8.1:+72001385 | MS.gene019628:CDS |
| CAGCAGTACCTGTCGATGGA+AGG | 0.608153 | 8.1:+72004270 | MS.gene019628:CDS |
| GTACCGTGCAGCCCTTCGGA+GGG | 0.611312 | 8.1:+72005429 | MS.gene019628:CDS |
| TCCAGAGCAGTGGTTGTCCG+AGG | 0.612433 | 8.1:-72002116 | None:intergenic |
| AGAAGAAACTCCGAGACCCA+AGG | 0.616548 | 8.1:+72003219 | MS.gene019628:CDS |
| GATCCCGGCAGAGCAAAAGA+TGG | 0.617790 | 8.1:+72005369 | MS.gene019628:CDS |
| TGAAATGTTCCATATGAGGA+AGG | 0.619523 | 8.1:-72005484 | None:intergenic |
| TGATATTCGTAACCCTCAGT+GGG | 0.627165 | 8.1:+72001386 | MS.gene019628:CDS |
| ACTGCTGTCCTAACAATGGG+TGG | 0.627208 | 8.1:-72004254 | None:intergenic |
| CACATGAGACACAATAAACA+AGG | 0.628531 | 8.1:-72003170 | None:intergenic |
| ATGTTTGACGTGGACGACAC+AGG | 0.631845 | 8.1:+72005607 | MS.gene019628:CDS |
| GTAGACGCTTTCCAGAGCAG+TGG | 0.632377 | 8.1:-72002126 | None:intergenic |
| CCAAATTGAGAGACATACAT+CGG | 0.633196 | 8.1:-72001842 | None:intergenic |
| ATTTCATGAAATTGACGCTG+AGG | 0.635643 | 8.1:+72005501 | MS.gene019628:CDS |
| ACAATGTGATAGAGACGACC+AGG | 0.636901 | 8.1:-72003254 | None:intergenic |
| CAATTTGGCTGTAAGATATG+CGG | 0.643247 | 8.1:+72001857 | MS.gene019628:CDS |
| AGGACAGCAGTACCTGTCGA+TGG | 0.651084 | 8.1:+72004266 | MS.gene019628:CDS |
| GGATTGAGAAGGAATCCCAA+CGG | 0.658153 | 8.1:+72004345 | MS.gene019628:CDS |
| TGTCTTGCGGAAGGATTACG+GGG | 0.660199 | 8.1:+72001446 | MS.gene019628:CDS |
| GAGAGCATACTGTACCTGAA+GGG | 0.660939 | 8.1:-72003287 | None:intergenic |
| AAGGATTACGGGGATAACCG+AGG | 0.672435 | 8.1:+72001456 | MS.gene019628:CDS |
| CCACCTTCGGGAGCCCACTG+AGG | 0.698185 | 8.1:-72001399 | None:intergenic |
| GGTTCTGAGGAAGTTAATAG+CGG | 0.704402 | 8.1:+72001677 | MS.gene019628:CDS |
| TGTACGGAGTAACACAACCT+CGG | 0.711683 | 8.1:-72001473 | None:intergenic |
| GGACAAACGGAATTTCATGG+TGG | 0.722297 | 8.1:+72001597 | MS.gene019628:CDS |
| GGCTACGAGAGTGAAAATTG+GGG | 0.726107 | 8.1:+72001294 | MS.gene019628:CDS |
| ATTGGGGATACAGAGAGACA+AGG | 0.732263 | 8.1:+72001794 | MS.gene019628:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAATTTAAACAATTTATA+TGG | - | chr8.1:72005180-72005199 | None:intergenic | 10.0% |
| !! | TATAAAATATAAATAGAAAC+TGG | - | chr8.1:72004599-72004618 | None:intergenic | 10.0% |
| !!! | AATGTTAAAATTCATAATTT+TGG | - | chr8.1:72003414-72003433 | None:intergenic | 10.0% |
| !!! | TTTTTTTTCATAATAAGTTT+TGG | + | chr8.1:72003628-72003647 | MS.gene019628:intron | 10.0% |
| !! | AATTTCAACAATAATTTAGA+CGG | + | chr8.1:72004857-72004876 | MS.gene019628:intron | 15.0% |
| !! | ACTCTAGTAAAAATAAAAAT+GGG | + | chr8.1:72003928-72003947 | MS.gene019628:intron | 15.0% |
| !! | AGTAAGTTTATAATAACAAA+AGG | - | chr8.1:72001921-72001940 | None:intergenic | 15.0% |
| !! | TACTCTAGTAAAAATAAAAA+TGG | + | chr8.1:72003927-72003946 | MS.gene019628:intron | 15.0% |
| !!! | TAATTGATAACATGTATATT+TGG | - | chr8.1:72004998-72005017 | None:intergenic | 15.0% |
| !! | AAATTAATTGTTGATGTCTT+CGG | - | chr8.1:72002215-72002234 | None:intergenic | 20.0% |
| !! | ACACATTGAATTCAATAATT+TGG | - | chr8.1:72004169-72004188 | None:intergenic | 20.0% |
| !! | AGATGCAAATTAATGAATAA+TGG | - | chr8.1:72002709-72002728 | None:intergenic | 20.0% |
| !! | ATGAAAGAAATAACAATGAT+TGG | - | chr8.1:72003080-72003099 | None:intergenic | 20.0% |
| !! | GTTAATACAGTTTAAATACA+TGG | - | chr8.1:72005158-72005177 | None:intergenic | 20.0% |
| !! | TAGTTAATATGTTCATTGAA+TGG | + | chr8.1:72004899-72004918 | MS.gene019628:intron | 20.0% |
| !! | TTTAATTAAAGTGACAGTAA+TGG | + | chr8.1:72002852-72002871 | MS.gene019628:intron | 20.0% |
| !!! | AATCATTGTTATTTCTTTCA+TGG | + | chr8.1:72003079-72003098 | MS.gene019628:intron | 20.0% |
| !!! | AATTTTTCATGAATATGCAT+TGG | + | chr8.1:72003018-72003037 | MS.gene019628:intron | 20.0% |
| !!! | ATATGATATTCTTTTTTCCT+CGG | + | chr8.1:72002744-72002763 | MS.gene019628:intron | 20.0% |
| !!! | ATTTTTTTTTCTTCTCAAGT+TGG | + | chr8.1:72003668-72003687 | MS.gene019628:intron | 20.0% |
| !!! | TTTAATTCATTTTGAAACTC+TGG | + | chr8.1:72004457-72004476 | MS.gene019628:intron | 20.0% |
| ! | AAAAATAAAAATGGGTCCAT+AGG | + | chr8.1:72003936-72003955 | MS.gene019628:intron | 25.0% |
| ! | AAACTTATACAACTTTCCTA+TGG | - | chr8.1:72003955-72003974 | None:intergenic | 25.0% |
| ! | AACATGATGAATTTGATCTA+AGG | + | chr8.1:72003499-72003518 | MS.gene019628:intron | 25.0% |
| ! | ACATGATGAATTTGATCTAA+GGG | + | chr8.1:72003500-72003519 | MS.gene019628:intron | 25.0% |
| ! | ACTTAGTTTAATTACGCTTA+AGG | - | chr8.1:72002426-72002445 | None:intergenic | 25.0% |
| ! | AGAATATCATATTAACCAGT+TGG | - | chr8.1:72002736-72002755 | None:intergenic | 25.0% |
| ! | ATTGTTCATAATAGAACAAC+TGG | + | chr8.1:72004016-72004035 | MS.gene019628:intron | 25.0% |
| ! | CTAAAATCTGTGAATAAATC+AGG | - | chr8.1:72002783-72002802 | None:intergenic | 25.0% |
| ! | CTTAGTTTAATTACGCTTAA+GGG | - | chr8.1:72002425-72002444 | None:intergenic | 25.0% |
| ! | GTTAATGATGTTCAAAATCA+TGG | + | chr8.1:72005056-72005075 | MS.gene019628:intron | 25.0% |
| ! | TAAGAAGAGTCAATTAATTG+CGG | + | chr8.1:72003473-72003492 | MS.gene019628:intron | 25.0% |
| ! | TGAGAAGAAAAAAAAATCAC+AGG | - | chr8.1:72003665-72003684 | None:intergenic | 25.0% |
| ! | TTCATTGAAACATTTAAGTG+TGG | - | chr8.1:72004699-72004718 | None:intergenic | 25.0% |
| ! | TTGATAGATAAGAAATCATG+AGG | - | chr8.1:72002033-72002052 | None:intergenic | 25.0% |
| !! | ATTGAAAATCTTATTTCCTG+TGG | - | chr8.1:72003001-72003020 | None:intergenic | 25.0% |
| !! | CCAATATTTGTTGGAAAATA+AGG | + | chr8.1:72004511-72004530 | MS.gene019628:intron | 25.0% |
| !! | CTGATTTATTCACAGATTTT+AGG | + | chr8.1:72002781-72002800 | MS.gene019628:intron | 25.0% |
| !! | TTCATAAGATTTTTGCTGAA+AGG | + | chr8.1:72003570-72003589 | MS.gene019628:intron | 25.0% |
| !!! | AGATTTTAGGATTTGTTGAA+TGG | + | chr8.1:72002794-72002813 | MS.gene019628:intron | 25.0% |
| !!! | CATAATAAGTTTTGGTCATT+TGG | + | chr8.1:72003636-72003655 | MS.gene019628:intron | 25.0% |
| !!! | CCTTATTTTCCAACAAATAT+TGG | - | chr8.1:72004514-72004533 | None:intergenic | 25.0% |
| !!! | TTGTTTTTTTTAACAGCATG+TGG | + | chr8.1:72004784-72004803 | MS.gene019628:intron | 25.0% |
| AAAAAATGTCTATACTCTGC+AGG | + | chr8.1:72001273-72001292 | MS.gene019628:CDS | 30.0% | |
| AACTTATATGTTGACGTTCA+TGG | + | chr8.1:72001707-72001726 | MS.gene019628:CDS | 30.0% | |
| AAGTCTACGTCACTAAATTA+CGG | + | chr8.1:72004095-72004114 | MS.gene019628:intron | 30.0% | |
| AAGTGCAAACCAATATTTGT+TGG | + | chr8.1:72004502-72004521 | MS.gene019628:intron | 30.0% | |
| ACTTATATGTTGACGTTCAT+GGG | + | chr8.1:72001708-72001727 | MS.gene019628:CDS | 30.0% | |
| AGAACCTAACAATAAAAGAG+AGG | + | chr8.1:72002005-72002024 | MS.gene019628:intron | 30.0% | |
| AGCTTAAAGCTGTTAAGTTT+AGG | - | chr8.1:72002546-72002565 | None:intergenic | 30.0% | |
| AGTGTCAATGCTTCATAATT+AGG | + | chr8.1:72003895-72003914 | MS.gene019628:intron | 30.0% | |
| AGTTAATGCTAGAGAAAGAT+CGG | + | chr8.1:72005338-72005357 | MS.gene019628:intron | 30.0% | |
| ATAACAAACGATCAGAAAGT+TGG | + | chr8.1:72005566-72005585 | MS.gene019628:CDS | 30.0% | |
| ATGAACGTCAACATATAAGT+TGG | - | chr8.1:72001708-72001727 | None:intergenic | 30.0% | |
| ATTAATACCATAACCACCTT+CGG | - | chr8.1:72001415-72001434 | None:intergenic | 30.0% | |
| CAATAAAACTGAACTGAAGT+CGG | - | chr8.1:72002180-72002199 | None:intergenic | 30.0% | |
| CAATAAACACACTCAAGTAT+AGG | - | chr8.1:72001228-72001247 | None:intergenic | 30.0% | |
| CATGATGAATTTGATCTAAG+GGG | + | chr8.1:72003501-72003520 | MS.gene019628:intron | 30.0% | |
| CTTCATAATCGTGACAAATT+GGG | + | chr8.1:72001777-72001796 | MS.gene019628:CDS | 30.0% | |
| GAAAGTTGGAATGAATTTGT+CGG | + | chr8.1:72005580-72005599 | MS.gene019628:CDS | 30.0% | |
| GAACCTAACAATAAAAGAGA+GGG | + | chr8.1:72002006-72002025 | MS.gene019628:intron | 30.0% | |
| GATGATTCATTGATACAACA+GGG | - | chr8.1:72005119-72005138 | None:intergenic | 30.0% | |
| GTTATGGTATTAATCCTGAT+TGG | + | chr8.1:72001421-72001440 | MS.gene019628:CDS | 30.0% | |
| GTTCAGCTGATATGATAAAT+AGG | - | chr8.1:72002662-72002681 | None:intergenic | 30.0% | |
| TAAATGTCAGAGATGAAAGA+AGG | - | chr8.1:72001954-72001973 | None:intergenic | 30.0% | |
| TCAATGAAGTTATTCATGCA+GGG | + | chr8.1:72004711-72004730 | MS.gene019628:intron | 30.0% | |
| TCTTCGTAACTTTCTAATCA+TGG | + | chr8.1:72003443-72003462 | MS.gene019628:intron | 30.0% | |
| TGATCAAGGTATATCATGTA+CGG | - | chr8.1:72001492-72001511 | None:intergenic | 30.0% | |
| TGTCAAAAACAGAAGTCATA+AGG | + | chr8.1:72002520-72002539 | MS.gene019628:intron | 30.0% | |
| TTCAATGAAGTTATTCATGC+AGG | + | chr8.1:72004710-72004729 | MS.gene019628:intron | 30.0% | |
| TTCATAATCGTGACAAATTG+GGG | + | chr8.1:72001778-72001797 | MS.gene019628:CDS | 30.0% | |
| TTCATGAAATGTTCCATATG+AGG | - | chr8.1:72005491-72005510 | None:intergenic | 30.0% | |
| TTCATGCTTCAAATCCAAAA+GGG | + | chr8.1:72002478-72002497 | MS.gene019628:intron | 30.0% | |
| TTGAATGTAACCATATGTGT+CGG | + | chr8.1:72003820-72003839 | MS.gene019628:intron | 30.0% | |
| TTTCTTTCATGGTTATGCAT+TGG | + | chr8.1:72003090-72003109 | MS.gene019628:intron | 30.0% | |
| ! | ATTTTACAAGTGTCTCAAAG+GGG | + | chr8.1:72002877-72002896 | MS.gene019628:intron | 30.0% |
| ! | CATTTTACAAGTGTCTCAAA+GGG | + | chr8.1:72002876-72002895 | MS.gene019628:intron | 30.0% |
| ! | CTGTGAATAAATCAGGTTTT+CGG | - | chr8.1:72002776-72002795 | None:intergenic | 30.0% |
| ! | TCATTTTACAAGTGTCTCAA+AGG | + | chr8.1:72002875-72002894 | MS.gene019628:intron | 30.0% |
| !! | ACTTATTTTTCTTCCTAAGC+AGG | + | chr8.1:72002082-72002101 | MS.gene019628:intron | 30.0% |
| !! | ATGGTGGATATGTTCATAAT+GGG | + | chr8.1:72001613-72001632 | MS.gene019628:CDS | 30.0% |
| !! | TGCAGCAATAATTTCTAGTT+TGG | + | chr8.1:72004204-72004223 | MS.gene019628:intron | 30.0% |
| !! | TGTTCATAATGGGTTATTGA+AGG | + | chr8.1:72001623-72001642 | MS.gene019628:CDS | 30.0% |
| AAAAGGGATTGTACTTGACA+GGG | + | chr8.1:72002494-72002513 | MS.gene019628:intron | 35.0% | |
| AACTCGTCAGTGTTTACTAA+AGG | - | chr8.1:72004766-72004785 | None:intergenic | 35.0% | |
| AAGTAAGTAGTGACTGATAG+AGG | - | chr8.1:72002601-72002620 | None:intergenic | 35.0% | |
| AAGTTTACACCTGAAAATCG+TGG | + | chr8.1:72005034-72005053 | MS.gene019628:intron | 35.0% | |
| AATTTGCATCTGATTCCAAC+TGG | + | chr8.1:72002718-72002737 | MS.gene019628:intron | 35.0% | |
| ACATGGTTAATCATGTTCAG+TGG | - | chr8.1:72005141-72005160 | None:intergenic | 35.0% | |
| ACTTGAGTGTGTTTATTGTC+TGG | + | chr8.1:72001230-72001249 | MS.gene019628:CDS | 35.0% | |
| ATACCTTGATCATGATCGTT+CGG | + | chr8.1:72001500-72001519 | MS.gene019628:CDS | 35.0% | |
| ATTATCAAATTGTCGCATGG+TGG | + | chr8.1:72002331-72002350 | MS.gene019628:intron | 35.0% | |
| ATTGTGTCTCATGTGCTTAA+AGG | + | chr8.1:72003178-72003197 | MS.gene019628:CDS | 35.0% | |
| ATTTCATGAAATTGACGCTG+AGG | + | chr8.1:72005501-72005520 | MS.gene019628:CDS | 35.0% | |
| CAAATTGAGAGACATACATC+GGG | - | chr8.1:72001844-72001863 | None:intergenic | 35.0% | |
| CAAGATAAATAGATGCACAG+TGG | - | chr8.1:72003324-72003343 | None:intergenic | 35.0% | |
| CAATTTGGCTGTAAGATATG+CGG | + | chr8.1:72001857-72001876 | MS.gene019628:CDS | 35.0% | |
| CACATGAGACACAATAAACA+AGG | - | chr8.1:72003173-72003192 | None:intergenic | 35.0% | |
| CCAAATTGAGAGACATACAT+CGG | - | chr8.1:72001845-72001864 | None:intergenic | 35.0% | |
| CTTGAGTGTGTTTATTGTCT+GGG | + | chr8.1:72001231-72001250 | MS.gene019628:CDS | 35.0% | |
| GCTTCATAATCGTGACAAAT+TGG | + | chr8.1:72001776-72001795 | MS.gene019628:CDS | 35.0% | |
| GGATGATTCATTGATACAAC+AGG | - | chr8.1:72005120-72005139 | None:intergenic | 35.0% | |
| GGTTAATTGTGTTCAGTTGA+TGG | + | chr8.1:72005077-72005096 | MS.gene019628:intron | 35.0% | |
| GTCAGTGTTTACTAAAGGTT+GGG | - | chr8.1:72004761-72004780 | None:intergenic | 35.0% | |
| GTTCATGCTTCAAATCCAAA+AGG | + | chr8.1:72002477-72002496 | MS.gene019628:intron | 35.0% | |
| TAAGTGATAAGAGCTTAACC+TGG | - | chr8.1:72002937-72002956 | None:intergenic | 35.0% | |
| TCAGTGTTTACTAAAGGTTG+GGG | - | chr8.1:72004760-72004779 | None:intergenic | 35.0% | |
| TCGTCCTTGTTAGTTAAGTA+AGG | - | chr8.1:72003359-72003378 | None:intergenic | 35.0% | |
| TGAAAGGTTTACACAGCTTT+AGG | + | chr8.1:72003586-72003605 | MS.gene019628:intron | 35.0% | |
| TGAAATGTTCCATATGAGGA+AGG | - | chr8.1:72005487-72005506 | None:intergenic | 35.0% | |
| TGATAACAAGCTTGGACAAA+CGG | + | chr8.1:72001584-72001603 | MS.gene019628:CDS | 35.0% | |
| TGATCGTTCGGAAATTATAC+TGG | + | chr8.1:72001512-72001531 | MS.gene019628:CDS | 35.0% | |
| TGGATTACATAATGACCACA+AGG | - | chr8.1:72003394-72003413 | None:intergenic | 35.0% | |
| TTAATACCATAACCACCTTC+GGG | - | chr8.1:72001414-72001433 | None:intergenic | 35.0% | |
| TTATCGTGTAAATTCTGCTC+AGG | + | chr8.1:72003525-72003544 | MS.gene019628:intron | 35.0% | |
| TTCTACCAAAACAGTAGACA+TGG | + | chr8.1:72004411-72004430 | MS.gene019628:intron | 35.0% | |
| TTGAAGCATGAACTAAGTGT+AGG | - | chr8.1:72002470-72002489 | None:intergenic | 35.0% | |
| ! | AAAGTGCCAGTTATGAAACA+CGG | + | chr8.1:72003761-72003780 | MS.gene019628:intron | 35.0% |
| ! | CATCATTAACCACGATTTTC+AGG | - | chr8.1:72005046-72005065 | None:intergenic | 35.0% |
| ! | CTCTTTGCTGTATCAGAATA+TGG | + | chr8.1:72004545-72004564 | MS.gene019628:intron | 35.0% |
| ! | GAAATTATACTGGCTGTTAG+TGG | + | chr8.1:72001522-72001541 | MS.gene019628:CDS | 35.0% |
| ! | TAAATTCAGCTTTTGCCGTT+AGG | + | chr8.1:72003047-72003066 | MS.gene019628:intron | 35.0% |
| ! | TAGTTAAGTAAGGCGTCATA+TGG | - | chr8.1:72003349-72003368 | None:intergenic | 35.0% |
| !! | CATGGTGGATATGTTCATAA+TGG | + | chr8.1:72001612-72001631 | MS.gene019628:CDS | 35.0% |
| !! | GTTTTGCTTGATAACAAGCT+TGG | + | chr8.1:72001576-72001595 | MS.gene019628:CDS | 35.0% |
| !! | TAGTGGACTCAATTTAGCAA+AGG | + | chr8.1:72001539-72001558 | MS.gene019628:CDS | 35.0% |
| !! | TGATCGTTTGTTATGAGACA+AGG | - | chr8.1:72005560-72005579 | None:intergenic | 35.0% |
| AACTCTATCGTACTACAGGT+TGG | + | chr8.1:72001888-72001907 | MS.gene019628:intron | 40.0% | |
| AAGATTGTGCGACAAATTCG+TGG | - | chr8.1:72001351-72001370 | None:intergenic | 40.0% | |
| AATCTTCCTAACCTGCAATC+AGG | - | chr8.1:72004233-72004252 | None:intergenic | 40.0% | |
| AGGCTACGAGAGTGAAAATT+GGG | + | chr8.1:72001293-72001312 | MS.gene019628:CDS | 40.0% | |
| ATCCTGATTGGATTGTCTTG+CGG | + | chr8.1:72001433-72001452 | MS.gene019628:CDS | 40.0% | |
| ATGATATTCGTAACCCTCAG+TGG | + | chr8.1:72001385-72001404 | MS.gene019628:CDS | 40.0% | |
| ATGATTGGAGCTCATCCTAA+CGG | - | chr8.1:72003065-72003084 | None:intergenic | 40.0% | |
| ATTGTCTTGCGGAAGGATTA+CGG | + | chr8.1:72001444-72001463 | MS.gene019628:CDS | 40.0% | |
| CAAAAGGGATTGTACTTGAC+AGG | + | chr8.1:72002493-72002512 | MS.gene019628:intron | 40.0% | |
| CCGATGTATGTCTCTCAATT+TGG | + | chr8.1:72001842-72001861 | MS.gene019628:CDS | 40.0% | |
| CGCATTATCAAATTGTCGCA+TGG | + | chr8.1:72002328-72002347 | MS.gene019628:intron | 40.0% | |
| CGTCAGTGTTTACTAAAGGT+TGG | - | chr8.1:72004762-72004781 | None:intergenic | 40.0% | |
| CTTAAAGGATACTTGCACAC+TGG | + | chr8.1:72003193-72003212 | MS.gene019628:CDS | 40.0% | |
| CTTGGACAAACGGAATTTCA+TGG | + | chr8.1:72001594-72001613 | MS.gene019628:CDS | 40.0% | |
| GAAGAGTCAATTAATTGCGG+AGG | + | chr8.1:72003476-72003495 | MS.gene019628:intron | 40.0% | |
| GAAGATTTCCACCCATTGTT+AGG | + | chr8.1:72004246-72004265 | MS.gene019628:CDS | 40.0% | |
| GACGCCTTACTTAACTAACA+AGG | + | chr8.1:72003352-72003371 | MS.gene019628:intron | 40.0% | |
| GAGTTCACAATTCTAACCAC+AGG | + | chr8.1:72002982-72003001 | MS.gene019628:intron | 40.0% | |
| GATCAACTCTATCGTACTAC+AGG | + | chr8.1:72001884-72001903 | MS.gene019628:CDS | 40.0% | |
| GCTAGAGAAAGATCGGAATA+TGG | + | chr8.1:72005345-72005364 | MS.gene019628:CDS | 40.0% | |
| GGTAAAAAATCGTCCTGCTT+AGG | - | chr8.1:72002098-72002117 | None:intergenic | 40.0% | |
| GTAAACTTGAGCACAAACTG+TGG | - | chr8.1:72005022-72005041 | None:intergenic | 40.0% | |
| TATCAGCTGAACACTTCTCT+TGG | + | chr8.1:72002670-72002689 | MS.gene019628:intron | 40.0% | |
| TCATACTGTCCACAACATGT+CGG | - | chr8.1:72002961-72002980 | None:intergenic | 40.0% | |
| TCCAAACCCAATCAGTTTGT+GGG | + | chr8.1:72003725-72003744 | MS.gene019628:intron | 40.0% | |
| TGATATTCGTAACCCTCAGT+GGG | + | chr8.1:72001386-72001405 | MS.gene019628:CDS | 40.0% | |
| TTCCAAACCCAATCAGTTTG+TGG | + | chr8.1:72003724-72003743 | MS.gene019628:intron | 40.0% | |
| TTCCTTCTCAATCCAAAGGA+TGG | - | chr8.1:72004339-72004358 | None:intergenic | 40.0% | |
| TTGTGTCCGTGTTTCATAAC+TGG | - | chr8.1:72003770-72003789 | None:intergenic | 40.0% | |
| TTTCCGAACGATCATGATCA+AGG | - | chr8.1:72001506-72001525 | None:intergenic | 40.0% | |
| TTTGGACATCTGCAAAATCG+TGG | - | chr8.1:72004980-72004999 | None:intergenic | 40.0% | |
| ! | ATTGGGTTTTTGATGCGGAA+TGG | + | chr8.1:72001652-72001671 | MS.gene019628:CDS | 40.0% |
| ! | CTGTCAAGTACAATCCCTTT+TGG | - | chr8.1:72002495-72002514 | None:intergenic | 40.0% |
| ! | GAAGATTCTGGAAGATCTAG+TGG | + | chr8.1:72005523-72005542 | MS.gene019628:CDS | 40.0% |
| ! | GAGGATTAGATGTGTCATTG+AGG | - | chr8.1:72002582-72002601 | None:intergenic | 40.0% |
| ! | GGTCCCTCTCTTTTATTGTT+AGG | - | chr8.1:72002012-72002031 | None:intergenic | 40.0% |
| ! | GTATGCCATGTCTACTGTTT+TGG | - | chr8.1:72004419-72004438 | None:intergenic | 40.0% |
| ! | TGTTTTCCTTTCTTGGCAGT+TGG | + | chr8.1:72003147-72003166 | MS.gene019628:intron | 40.0% |
| ! | TTGGGTTTTTGATGCGGAAT+GGG | + | chr8.1:72001653-72001672 | MS.gene019628:CDS | 40.0% |
| !! | AGGATTTGTTGAATGGAGTG+TGG | + | chr8.1:72002801-72002820 | MS.gene019628:intron | 40.0% |
| !! | CAGTGGTTGTTTTCCTTTCT+TGG | + | chr8.1:72003140-72003159 | MS.gene019628:intron | 40.0% |
| !! | GGTTCTGAGGAAGTTAATAG+CGG | + | chr8.1:72001677-72001696 | MS.gene019628:CDS | 40.0% |
| !! | TAATGGGTTATTGAAGGCAG+CGG | + | chr8.1:72001629-72001648 | MS.gene019628:CDS | 40.0% |
| !!! | AGCAGGACGATTTTTTACCT+CGG | + | chr8.1:72002099-72002118 | MS.gene019628:intron | 40.0% |
| AACTGGCACTTTGTTGAAGC+AGG | - | chr8.1:72003753-72003772 | None:intergenic | 45.0% | |
| ACAACTGTACGTGTCAGACA+CGG | + | chr8.1:72003854-72003873 | MS.gene019628:intron | 45.0% | |
| ACAATGTGATAGAGACGACC+AGG | - | chr8.1:72003257-72003276 | None:intergenic | 45.0% | |
| ACAGAATCCACCATGCCATA+AGG | - | chr8.1:72002372-72002391 | None:intergenic | 45.0% | |
| ACCACTGTAGCTCATAAAGC+TGG | - | chr8.1:72003127-72003146 | None:intergenic | 45.0% | |
| ACGTTCATGGGACATTCACT+TGG | + | chr8.1:72001720-72001739 | MS.gene019628:CDS | 45.0% | |
| AGATCGGAATATGGAGATCC+CGG | + | chr8.1:72005354-72005373 | MS.gene019628:CDS | 45.0% | |
| AGCTTAACCTGGTAACCTCA+AGG | - | chr8.1:72002926-72002945 | None:intergenic | 45.0% | |
| ATCACTTAGCCGACATGTTG+TGG | + | chr8.1:72002949-72002968 | MS.gene019628:intron | 45.0% | |
| ATGTTGCCTCTCTACTCAGA+TGG | - | chr8.1:72002245-72002264 | None:intergenic | 45.0% | |
| ATTGACGCTGAGGAAGATTC+TGG | + | chr8.1:72005511-72005530 | MS.gene019628:CDS | 45.0% | |
| ATTGGGGATACAGAGAGACA+AGG | + | chr8.1:72001794-72001813 | MS.gene019628:CDS | 45.0% | |
| ATTGTCTGGGTTGTACTCGT+TGG | + | chr8.1:72001244-72001263 | MS.gene019628:CDS | 45.0% | |
| CAAACTCTTCTGCAGTAGCT+AGG | - | chr8.1:72001320-72001339 | None:intergenic | 45.0% | |
| CAACAAGACACCGACACATA+TGG | - | chr8.1:72003833-72003852 | None:intergenic | 45.0% | |
| CAGGCTACGAGAGTGAAAAT+TGG | + | chr8.1:72001292-72001311 | MS.gene019628:CDS | 45.0% | |
| CCAAACCCAATCAGTTTGTG+GGG | + | chr8.1:72003726-72003745 | MS.gene019628:intron | 45.0% | |
| CGATCTTCTGATAGTCCTTG+TGG | + | chr8.1:72003376-72003395 | MS.gene019628:intron | 45.0% | |
| CTTAACCTGGTAACCTCAAG+GGG | - | chr8.1:72002924-72002943 | None:intergenic | 45.0% | |
| GATTGAGAAGGAATCCCAAC+GGG | + | chr8.1:72004346-72004365 | MS.gene019628:CDS | 45.0% | |
| GCATACTCACCTTCCTCATA+TGG | + | chr8.1:72005475-72005494 | MS.gene019628:CDS | 45.0% | |
| GCTTAACCTGGTAACCTCAA+GGG | - | chr8.1:72002925-72002944 | None:intergenic | 45.0% | |
| GGACAAACGGAATTTCATGG+TGG | + | chr8.1:72001597-72001616 | MS.gene019628:CDS | 45.0% | |
| GGATTGAGAAGGAATCCCAA+CGG | + | chr8.1:72004345-72004364 | MS.gene019628:CDS | 45.0% | |
| GGCTACGAGAGTGAAAATTG+GGG | + | chr8.1:72001294-72001313 | MS.gene019628:CDS | 45.0% | |
| GGGATTCCTTCTCAATCCAA+AGG | - | chr8.1:72004343-72004362 | None:intergenic | 45.0% | |
| GGTACTGCTGTCCTAACAAT+GGG | - | chr8.1:72004260-72004279 | None:intergenic | 45.0% | |
| GTGCGACAAATTCGTGGTAT+AGG | - | chr8.1:72001345-72001364 | None:intergenic | 45.0% | |
| GTGTTGCAGCCTAATACCTA+TGG | - | chr8.1:72002403-72002422 | None:intergenic | 45.0% | |
| TACCAGCCACCATAGGTATT+AGG | + | chr8.1:72002391-72002410 | MS.gene019628:intron | 45.0% | |
| TCGTGTAAATTCTGCTCAGG+AGG | + | chr8.1:72003528-72003547 | MS.gene019628:intron | 45.0% | |
| TCTCAATCCAAAGGATGGCA+TGG | - | chr8.1:72004334-72004353 | None:intergenic | 45.0% | |
| TGATCAAACCTTCCATCGAC+AGG | - | chr8.1:72004281-72004300 | None:intergenic | 45.0% | |
| TGATTGGATTGTCTTGCGGA+AGG | + | chr8.1:72001437-72001456 | MS.gene019628:CDS | 45.0% | |
| TGCCATCCTTTGGATTGAGA+AGG | + | chr8.1:72004334-72004353 | MS.gene019628:CDS | 45.0% | |
| TGTACGGAGTAACACAACCT+CGG | - | chr8.1:72001476-72001495 | None:intergenic | 45.0% | |
| TTCCGCAAGACAATCCAATC+AGG | - | chr8.1:72001438-72001457 | None:intergenic | 45.0% | |
| TTGCAGCCTAATACCTATGG+TGG | - | chr8.1:72002400-72002419 | None:intergenic | 45.0% | |
| TTGTCTGGGTTGTACTCGTT+GGG | + | chr8.1:72001245-72001264 | MS.gene019628:CDS | 45.0% | |
| TTGTCTTGCGGAAGGATTAC+GGG | + | chr8.1:72001445-72001464 | MS.gene019628:CDS | 45.0% | |
| ! | AGAGAGCATACTGTACCTGA+AGG | - | chr8.1:72003291-72003310 | None:intergenic | 45.0% |
| ! | AGGTACTGCTGTCCTAACAA+TGG | - | chr8.1:72004261-72004280 | None:intergenic | 45.0% |
| ! | CATATGTGTCGGTGTCTTGT+TGG | + | chr8.1:72003831-72003850 | MS.gene019628:intron | 45.0% |
| ! | CTAACCATCTTTTGCTCTGC+CGG | - | chr8.1:72005376-72005395 | None:intergenic | 45.0% |
| ! | GAGAGCATACTGTACCTGAA+GGG | - | chr8.1:72003290-72003309 | None:intergenic | 45.0% |
| ! | GTTATTGAAGGCAGCGGATT+GGG | + | chr8.1:72001635-72001654 | MS.gene019628:CDS | 45.0% |
| ! | TAACCATCTTTTGCTCTGCC+GGG | - | chr8.1:72005375-72005394 | None:intergenic | 45.0% |
| ! | TCCAGCTTTATGAGCTACAG+TGG | + | chr8.1:72003123-72003142 | MS.gene019628:intron | 45.0% |
| !!! | AGCGGATTGGGTTTTTGATG+CGG | + | chr8.1:72001647-72001666 | MS.gene019628:CDS | 45.0% |
| !!! | GCGTCTACAAGTCACTTTTG+TGG | + | chr8.1:72002141-72002160 | MS.gene019628:CDS | 45.0% |
| !! | AATTATTATTATTTGATATA+CGG | + | chr8.1:72005286-72005305 | MS.gene019628:intron | 5.0% |
| AAGGATTACGGGGATAACCG+AGG | + | chr8.1:72001456-72001475 | MS.gene019628:CDS | 50.0% | |
| ACAAGGCCAACTGCCAAGAA+AGG | - | chr8.1:72003156-72003175 | None:intergenic | 50.0% | |
| ACCAAGCCATCTGAGTAGAG+AGG | + | chr8.1:72002236-72002255 | MS.gene019628:intron | 50.0% | |
| ACTGCTGTCCTAACAATGGG+TGG | - | chr8.1:72004257-72004276 | None:intergenic | 50.0% | |
| AGAAGAAACTCCGAGACCCA+AGG | + | chr8.1:72003219-72003238 | MS.gene019628:CDS | 50.0% | |
| AGCCTAATACCTATGGTGGC+TGG | - | chr8.1:72002396-72002415 | None:intergenic | 50.0% | |
| ATTTGAGCTCTGTCCCCTTG+AGG | + | chr8.1:72002908-72002927 | MS.gene019628:intron | 50.0% | |
| CAACTGTACGTGTCAGACAC+GGG | + | chr8.1:72003855-72003874 | MS.gene019628:intron | 50.0% | |
| CAAGTGTGCGTGCATTGTCA+TGG | + | chr8.1:72002277-72002296 | MS.gene019628:intron | 50.0% | |
| CAGGTCCCCACAAACTGATT+GGG | - | chr8.1:72003734-72003753 | None:intergenic | 50.0% | |
| CCCCACAAACTGATTGGGTT+TGG | - | chr8.1:72003729-72003748 | None:intergenic | 50.0% | |
| CGGCAGAGCAAAAGATGGTT+AGG | + | chr8.1:72005374-72005393 | MS.gene019628:CDS | 50.0% | |
| CTACTGACCATGCCATCCTT+TGG | + | chr8.1:72004324-72004343 | MS.gene019628:CDS | 50.0% | |
| CTCCCTGCGAGAAAAGACTT+CGG | + | chr8.1:72004048-72004067 | MS.gene019628:intron | 50.0% | |
| CTTCCTAACCTGCAATCAGG+AGG | - | chr8.1:72004230-72004249 | None:intergenic | 50.0% | |
| GAGGAAGGTGAGTATGCTTG+AGG | - | chr8.1:72005472-72005491 | None:intergenic | 50.0% | |
| GATTCTGTACCAGCCACCAT+AGG | + | chr8.1:72002384-72002403 | MS.gene019628:intron | 50.0% | |
| GGTTATTGAAGGCAGCGGAT+TGG | + | chr8.1:72001634-72001653 | MS.gene019628:CDS | 50.0% | |
| TAGTTTGGCCTCCTGATTGC+AGG | + | chr8.1:72004219-72004238 | MS.gene019628:intron | 50.0% | |
| TGTCTTGCGGAAGGATTACG+GGG | + | chr8.1:72001446-72001465 | MS.gene019628:CDS | 50.0% | |
| TTGAGAGACATACATCGGGC+AGG | - | chr8.1:72001840-72001859 | None:intergenic | 50.0% | |
| ! | CAGGTTTTCGGTATTCACCG+AGG | - | chr8.1:72002764-72002783 | None:intergenic | 50.0% |
| ! | GACCGAAGTCTTTTCTCGCA+GGG | - | chr8.1:72004053-72004072 | None:intergenic | 50.0% |
| ! | GGTTTTTGATGCGGAATGGG+AGG | + | chr8.1:72001656-72001675 | MS.gene019628:CDS | 50.0% |
| !! | ATGGGACATTCACTTGGTGC+TGG | + | chr8.1:72001726-72001745 | MS.gene019628:CDS | 50.0% |
| !! | TGGGACATTCACTTGGTGCT+GGG | + | chr8.1:72001727-72001746 | MS.gene019628:CDS | 50.0% |
| AATTGTCGCATGGTGGCTCG+TGG | + | chr8.1:72002338-72002357 | MS.gene019628:intron | 55.0% | |
| AGCTTACATCGAGAGCCCGT+TGG | - | chr8.1:72004364-72004383 | None:intergenic | 55.0% | |
| AGGACAGCAGTACCTGTCGA+TGG | + | chr8.1:72004266-72004285 | MS.gene019628:CDS | 55.0% | |
| ATGCGGAATGGGAGGTTCTG+AGG | + | chr8.1:72001664-72001683 | MS.gene019628:CDS | 55.0% | |
| CAAAGCAACTGCCCTCCGAA+GGG | - | chr8.1:72005443-72005462 | None:intergenic | 55.0% | |
| CAGCAGTACCTGTCGATGGA+AGG | + | chr8.1:72004270-72004289 | MS.gene019628:CDS | 55.0% | |
| CAGGTGCATACAGACGCCTT+GGG | - | chr8.1:72003238-72003257 | None:intergenic | 55.0% | |
| CATACAGACGCCTTGGGTCT+CGG | - | chr8.1:72003232-72003251 | None:intergenic | 55.0% | |
| CATACATCGGGCAGGAGCAA+TGG | - | chr8.1:72001832-72001851 | None:intergenic | 55.0% | |
| CGAGAAAAGACTTCGGTCGC+TGG | + | chr8.1:72004055-72004074 | MS.gene019628:intron | 55.0% | |
| GATCCCGGCAGAGCAAAAGA+TGG | + | chr8.1:72005369-72005388 | MS.gene019628:CDS | 55.0% | |
| GCAGGTCCCCACAAACTGAT+TGG | - | chr8.1:72003735-72003754 | None:intergenic | 55.0% | |
| GCCTCTCTACTCAGATGGCT+TGG | - | chr8.1:72002240-72002259 | None:intergenic | 55.0% | |
| GCTTACATCGAGAGCCCGTT+GGG | - | chr8.1:72004363-72004382 | None:intergenic | 55.0% | |
| GTAGACGCTTTCCAGAGCAG+TGG | - | chr8.1:72002129-72002148 | None:intergenic | 55.0% | |
| TCCACCATGCCATAAGGCCA+TGG | - | chr8.1:72002366-72002385 | None:intergenic | 55.0% | |
| TCTGTCCCCTTGAGGTTACC+AGG | + | chr8.1:72002916-72002935 | MS.gene019628:intron | 55.0% | |
| TGGCCTCCTGATTGCAGGTT+AGG | + | chr8.1:72004224-72004243 | MS.gene019628:intron | 55.0% | |
| TGGGTTGTACTCGTTGGGCT+TGG | + | chr8.1:72001250-72001269 | MS.gene019628:CDS | 55.0% | |
| TGTCGGACGCATGTTTGACG+TGG | + | chr8.1:72005597-72005616 | MS.gene019628:CDS | 55.0% | |
| TTGTCGAGCGAAAGCCCTTC+AGG | + | chr8.1:72003273-72003292 | MS.gene019628:CDS | 55.0% | |
| ! | CGACCGAAGTCTTTTCTCGC+AGG | - | chr8.1:72004054-72004073 | None:intergenic | 55.0% |
| !! | AAGAGTACCGTGCAGCCCTT+CGG | + | chr8.1:72005425-72005444 | MS.gene019628:CDS | 55.0% |
| !! | ACATTCACTTGGTGCTGGGG+TGG | + | chr8.1:72001731-72001750 | MS.gene019628:CDS | 55.0% |
| !! | GGGACATTCACTTGGTGCTG+GGG | + | chr8.1:72001728-72001747 | MS.gene019628:CDS | 55.0% |
| !! | TCCATGGCCTTATGGCATGG+TGG | + | chr8.1:72002362-72002381 | MS.gene019628:intron | 55.0% |
| ACCTCGGACAACCACTGCTC+TGG | + | chr8.1:72002115-72002134 | MS.gene019628:CDS | 60.0% | |
| CCAAAGCAACTGCCCTCCGA+AGG | - | chr8.1:72005444-72005463 | None:intergenic | 60.0% | |
| CCAGGTGCATACAGACGCCT+TGG | - | chr8.1:72003239-72003258 | None:intergenic | 60.0% | |
| CCTTCGGAGGGCAGTTGCTT+TGG | + | chr8.1:72005441-72005460 | MS.gene019628:CDS | 60.0% | |
| TCCAGAGCAGTGGTTGTCCG+AGG | - | chr8.1:72002119-72002138 | None:intergenic | 60.0% | |
| TGGGCTCCCGAAGGTGGTTA+TGG | + | chr8.1:72001405-72001424 | MS.gene019628:CDS | 60.0% | |
| ! | CCAAGGCGTCTGTATGCACC+TGG | + | chr8.1:72003236-72003255 | MS.gene019628:CDS | 60.0% |
| ! | CTCGTGGCTCCATGGCCTTA+TGG | + | chr8.1:72002354-72002373 | MS.gene019628:intron | 60.0% |
| !! | GGCTCCATGGCCTTATGGCA+TGG | + | chr8.1:72002359-72002378 | MS.gene019628:intron | 60.0% |
| !! | TTCACTTGGTGCTGGGGTGG+TGG | + | chr8.1:72001734-72001753 | MS.gene019628:CDS | 60.0% |
| AGTACCGTGCAGCCCTTCGG+AGG | + | chr8.1:72005428-72005447 | MS.gene019628:CDS | 65.0% | |
| CACCTTCGGGAGCCCACTGA+GGG | - | chr8.1:72001401-72001420 | None:intergenic | 65.0% | |
| CATGGTGGCTCGTGGCTCCA+TGG | + | chr8.1:72002346-72002365 | MS.gene019628:intron | 65.0% | |
| GTACCGTGCAGCCCTTCGGA+GGG | + | chr8.1:72005429-72005448 | MS.gene019628:CDS | 65.0% | |
| ! | AACCCTCAGTGGGCTCCCGA+AGG | + | chr8.1:72001396-72001415 | MS.gene019628:CDS | 65.0% |
| CCACCTTCGGGAGCCCACTG+AGG | - | chr8.1:72001402-72001421 | None:intergenic | 70.0% | |
| CTGCCCTCCGAAGGGCTGCA+CGG | - | chr8.1:72005435-72005454 | None:intergenic | 70.0% | |
| ! | CCTCAGTGGGCTCCCGAAGG+TGG | + | chr8.1:72001399-72001418 | MS.gene019628:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 72001204 | 72005628 | 72001204 | ID=MS.gene019628 |
| chr8.1 | mRNA | 72001204 | 72005628 | 72001204 | ID=MS.gene019628.t1;Parent=MS.gene019628 |
| chr8.1 | exon | 72001204 | 72001905 | 72001204 | ID=MS.gene019628.t1.exon1;Parent=MS.gene019628.t1 |
| chr8.1 | CDS | 72001204 | 72001905 | 72001204 | ID=cds.MS.gene019628.t1;Parent=MS.gene019628.t1 |
| chr8.1 | exon | 72002104 | 72002162 | 72002104 | ID=MS.gene019628.t1.exon2;Parent=MS.gene019628.t1 |
| chr8.1 | CDS | 72002104 | 72002162 | 72002104 | ID=cds.MS.gene019628.t1;Parent=MS.gene019628.t1 |
| chr8.1 | exon | 72003166 | 72003294 | 72003166 | ID=MS.gene019628.t1.exon3;Parent=MS.gene019628.t1 |
| chr8.1 | CDS | 72003166 | 72003294 | 72003166 | ID=cds.MS.gene019628.t1;Parent=MS.gene019628.t1 |
| chr8.1 | exon | 72004241 | 72004376 | 72004241 | ID=MS.gene019628.t1.exon4;Parent=MS.gene019628.t1 |
| chr8.1 | CDS | 72004241 | 72004376 | 72004241 | ID=cds.MS.gene019628.t1;Parent=MS.gene019628.t1 |
| chr8.1 | exon | 72005340 | 72005628 | 72005340 | ID=MS.gene019628.t1.exon5;Parent=MS.gene019628.t1 |
| chr8.1 | CDS | 72005340 | 72005628 | 72005340 | ID=cds.MS.gene019628.t1;Parent=MS.gene019628.t1 |
| Gene Sequence |
| Protein sequence |
