Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene020350.t1 | XP_013449864.1 | 98.6 | 138 | 2 | 0 | 1 | 138 | 1 | 138 | 1.60E-69 | 271.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene020350.t1 | P49964 | 69.7 | 132 | 36 | 2 | 7 | 138 | 9 | 136 | 1.2e-46 | 187.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene020350.t1 | A0A072U2F6 | 98.6 | 138 | 2 | 0 | 1 | 138 | 1 | 138 | 1.1e-69 | 271.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene020350 | MS.gene61154 | PPI |
MS.gene75343 | MS.gene020350 | PPI |
MS.gene034094 | MS.gene020350 | PPI |
MS.gene020350 | MS.gene026743 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene020350.t1 | MTR_7g096570 | 98.551 | 138 | 2 | 0 | 1 | 138 | 1 | 138 | 9.13e-100 | 282 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene020350.t1 | AT1G48160 | 70.270 | 111 | 33 | 0 | 1 | 111 | 1 | 111 | 4.75e-57 | 174 |
MS.gene020350.t1 | AT1G48160 | 70.270 | 111 | 33 | 0 | 1 | 111 | 1 | 111 | 4.75e-57 | 174 |
Find 32 sgRNAs with CRISPR-Local
Find 145 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGTCCTTCCATGGTGTTTA+GGG | 0.204157 | 7.2:+13709429 | None:intergenic |
AACCCTACTTGTGTCGAAAT+TGG | 0.211223 | 7.2:-13711592 | MS.gene020350:CDS |
TGATGCAGTCTCCTGCTTCT+TGG | 0.227052 | 7.2:+13709409 | None:intergenic |
TTGGTCCTTCCATGGTGTTT+AGG | 0.258012 | 7.2:+13709428 | None:intergenic |
TCATGCAAAGAGGACGAGTT+AGG | 0.334941 | 7.2:-13711411 | MS.gene020350:CDS |
ACCCTACTTGTGTCGAAATT+GGG | 0.338535 | 7.2:-13711591 | MS.gene020350:CDS |
GCTGGACCTTCCAACAAATC+TGG | 0.347799 | 7.2:-13709371 | MS.gene020350:CDS |
TCCACCTTTCCCAGATTTGT+TGG | 0.371350 | 7.2:+13709361 | None:intergenic |
CCTGCTTCTTGGTCCTTCCA+TGG | 0.417818 | 7.2:+13709420 | None:intergenic |
GTTGCTGAAGGAAGACGAAT+TGG | 0.430316 | 7.2:-13711634 | MS.gene020350:CDS |
ACGATCCACTTCTTTATGCT+TGG | 0.443869 | 7.2:+13711691 | None:intergenic |
CCTTTCCCAGATTTGTTGGA+AGG | 0.448852 | 7.2:+13709365 | None:intergenic |
TCAACAACAACTGCAACTGC+TGG | 0.454659 | 7.2:-13709389 | MS.gene020350:CDS |
CATGCAAAGAGGACGAGTTA+GGG | 0.478286 | 7.2:-13711410 | MS.gene020350:CDS |
AACCTCACCTCGATTGCAAA+AGG | 0.487649 | 7.2:+13711544 | None:intergenic |
CTGGACCTTCCAACAAATCT+GGG | 0.500340 | 7.2:-13709370 | MS.gene020350:CDS |
CCCCAATTTCGACACAAGTA+GGG | 0.516511 | 7.2:+13711590 | None:intergenic |
CCATGGAAGGACCAAGAAGC+AGG | 0.522661 | 7.2:-13709420 | MS.gene020350:CDS |
CCCTACTTGTGTCGAAATTG+GGG | 0.523869 | 7.2:-13711590 | MS.gene020350:CDS |
AATGTTACGCGTTGCAGAGA+TGG | 0.526719 | 7.2:-13709453 | MS.gene020350:CDS |
TCCCCAATTTCGACACAAGT+AGG | 0.535068 | 7.2:+13711589 | None:intergenic |
CCTCGTGATTTCATGCAAAG+AGG | 0.566493 | 7.2:-13711421 | MS.gene020350:CDS |
AACTTACTGGAAGCTATGGA+TGG | 0.567619 | 7.2:+13711352 | None:intergenic |
TCCAACAAATCTGGGAAAGG+TGG | 0.573312 | 7.2:-13709362 | MS.gene020350:CDS |
CCTTCCAACAAATCTGGGAA+AGG | 0.605602 | 7.2:-13709365 | MS.gene020350:CDS |
AATTACCAAGCATAAAGAAG+TGG | 0.608084 | 7.2:-13711696 | MS.gene020350:CDS |
TTGTTGATCACAGCTTGACA+AGG | 0.619387 | 7.2:-13711449 | MS.gene020350:intron |
TGGTCCCTAAACACCATGGA+AGG | 0.619588 | 7.2:-13709433 | MS.gene020350:CDS |
CCTCTTTGCATGAAATCACG+AGG | 0.620436 | 7.2:+13711421 | None:intergenic |
CAAAGTGTAAGTAAGATGGA+AGG | 0.620681 | 7.2:-13711721 | None:intergenic |
GAGATGGTCCCTAAACACCA+TGG | 0.690946 | 7.2:-13709437 | MS.gene020350:CDS |
CTCTTTGCATGAAATCACGA+GGG | 0.694337 | 7.2:+13711422 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTAATTATTAGAGAAAAA+GGG | + | chr7.2:13710961-13710980 | None:intergenic | 10.0% |
!!! | TACTTTTATGTTAAATAAAA+TGG | + | chr7.2:13710249-13710268 | None:intergenic | 10.0% |
!! | CAATTAATTATTAGAGAAAA+AGG | + | chr7.2:13710962-13710981 | None:intergenic | 15.0% |
!! | TTCGAATATAGATTTAAAAA+GGG | + | chr7.2:13710500-13710519 | None:intergenic | 15.0% |
!! | TTTCGAATATAGATTTAAAA+AGG | + | chr7.2:13710501-13710520 | None:intergenic | 15.0% |
!! | AATGGTAAAGGTTAAAAAAT+GGG | - | chr7.2:13710807-13710826 | MS.gene020350:intron | 20.0% |
!! | ATATTGAAGAAAAAACTTAC+TGG | + | chr7.2:13709716-13709735 | None:intergenic | 20.0% |
!! | ATTAATTGTAAGATCTGAAA+TGG | - | chr7.2:13710974-13710993 | MS.gene020350:intron | 20.0% |
!! | TTCTTTCTTAGAAATGAAAT+TGG | - | chr7.2:13710359-13710378 | MS.gene020350:intron | 20.0% |
!!! | AACACATATTTTATGGAAAT+GGG | + | chr7.2:13709911-13709930 | None:intergenic | 20.0% |
!!! | CTTATAATATTCCACTTTTA+TGG | - | chr7.2:13710118-13710137 | MS.gene020350:intron | 20.0% |
!!! | TTACAAATTCAAGTTGATTA+AGG | - | chr7.2:13710561-13710580 | MS.gene020350:intron | 20.0% |
!!! | TTATGATAGCTTATTTCTTA+TGG | - | chr7.2:13711401-13711420 | MS.gene020350:CDS | 20.0% |
! | AAAAGAATAGCATAATCTTG+TGG | + | chr7.2:13711062-13711081 | None:intergenic | 25.0% |
! | AAGATATCAAAGTAATGTTC+TGG | + | chr7.2:13709938-13709957 | None:intergenic | 25.0% |
! | AGACCATGATAATATAACAT+TGG | - | chr7.2:13711036-13711055 | MS.gene020350:intron | 25.0% |
! | ATTCATATGTTTAGCTATCT+GGG | - | chr7.2:13709755-13709774 | MS.gene020350:intron | 25.0% |
! | GAATGGTAAAGGTTAAAAAA+TGG | - | chr7.2:13710806-13710825 | MS.gene020350:intron | 25.0% |
! | TATATTGTTATGATTTCCAG+CGG | + | chr7.2:13711340-13711359 | None:intergenic | 25.0% |
! | TATTCATATGTTTAGCTATC+TGG | - | chr7.2:13709754-13709773 | MS.gene020350:intron | 25.0% |
!! | ACACATATTTTATGGAAATG+GGG | + | chr7.2:13709910-13709929 | None:intergenic | 25.0% |
!! | ACATTGATTATACTTTCTAC+CGG | - | chr7.2:13710090-13710109 | MS.gene020350:intron | 25.0% |
!! | GAACACATATTTTATGGAAA+TGG | + | chr7.2:13709912-13709931 | None:intergenic | 25.0% |
!! | TGGTTAGAACACATATTTTA+TGG | + | chr7.2:13709918-13709937 | None:intergenic | 25.0% |
!!! | AACTACTTTAGAGTTTGATA+AGG | + | chr7.2:13711000-13711019 | None:intergenic | 25.0% |
!!! | ATGCTACTTTAGTTAAAACA+AGG | + | chr7.2:13710595-13710614 | None:intergenic | 25.0% |
!!! | TTTTGGAATTGATGTAAACA+GGG | + | chr7.2:13709393-13709412 | None:intergenic | 25.0% |
!!! | TTTTGTTTTTATGTCTTTGC+AGG | - | chr7.2:13711567-13711586 | MS.gene020350:CDS | 25.0% |
!!! | TTTTTGGAATTGATGTAAAC+AGG | + | chr7.2:13709394-13709413 | None:intergenic | 25.0% |
AAAAAACTTACTGGAAGCTA+TGG | + | chr7.2:13709707-13709726 | None:intergenic | 30.0% | |
AAAGCACAAATTGAAGAAGT+AGG | - | chr7.2:13710621-13710640 | MS.gene020350:intron | 30.0% | |
AATATCATAGATGATCTCTC+TGG | + | chr7.2:13711376-13711395 | None:intergenic | 30.0% | |
AATGTTACATGCATATGGTA+TGG | + | chr7.2:13710390-13710409 | None:intergenic | 30.0% | |
AATTACCAAGCATAAAGAAG+TGG | - | chr7.2:13709356-13709375 | MS.gene020350:CDS | 30.0% | |
AGTTACAAAATTGACCTACA+TGG | + | chr7.2:13710860-13710879 | None:intergenic | 30.0% | |
ATATTGTTATGATTTCCAGC+GGG | + | chr7.2:13711339-13711358 | None:intergenic | 30.0% | |
CAATTCTTATGCTTTCATGA+GGG | + | chr7.2:13711273-13711292 | None:intergenic | 30.0% | |
CCAACTATCTAAATACCATA+AGG | + | chr7.2:13709809-13709828 | None:intergenic | 30.0% | |
CCTTATGGTATTTAGATAGT+TGG | - | chr7.2:13709806-13709825 | MS.gene020350:intron | 30.0% | |
CTAAATCCTATAATTTCTGC+AGG | + | chr7.2:13711161-13711180 | None:intergenic | 30.0% | |
CTGCAGAAATTATAGGATTT+AGG | - | chr7.2:13711159-13711178 | MS.gene020350:intron | 30.0% | |
GTTAATAACATCACAACAGA+GGG | - | chr7.2:13710666-13710685 | MS.gene020350:intron | 30.0% | |
TCACTTATAAGTTCCAATTG+TGG | - | chr7.2:13710170-13710189 | MS.gene020350:intron | 30.0% | |
TGCAAGCATCACATATTAAA+AGG | - | chr7.2:13711460-13711479 | MS.gene020350:intron | 30.0% | |
TGCATAATGTTACATGCATA+TGG | + | chr7.2:13710395-13710414 | None:intergenic | 30.0% | |
TGGAATATTATAAGTAGTGC+CGG | + | chr7.2:13710112-13710131 | None:intergenic | 30.0% | |
TGGCCAATGTTATATTATCA+TGG | + | chr7.2:13711042-13711061 | None:intergenic | 30.0% | |
TGTTAATAACATCACAACAG+AGG | - | chr7.2:13710665-13710684 | MS.gene020350:intron | 30.0% | |
TTATAAGTTCCAATTGTGGA+TGG | - | chr7.2:13710174-13710193 | MS.gene020350:intron | 30.0% | |
TTCTTCTTAGAGAATGGTAA+AGG | - | chr7.2:13710795-13710814 | MS.gene020350:intron | 30.0% | |
TTGATATGACAAAGTGATAC+TGG | - | chr7.2:13710018-13710037 | MS.gene020350:intron | 30.0% | |
TTGTATCATCTGATTAGTAC+TGG | - | chr7.2:13709782-13709801 | MS.gene020350:intron | 30.0% | |
TTTAAGCCTGCAGAAATTAT+AGG | - | chr7.2:13711152-13711171 | MS.gene020350:intron | 30.0% | |
! | CTCATGAAAGCATAAGAATT+GGG | - | chr7.2:13711272-13711291 | MS.gene020350:intron | 30.0% |
! | GTGTTTTTCTTCTTAGAGAA+TGG | - | chr7.2:13710789-13710808 | MS.gene020350:intron | 30.0% |
!! | AGTTAATGATTTGCTCACAT+AGG | - | chr7.2:13710285-13710304 | MS.gene020350:intron | 30.0% |
!!! | CTCCAATATTTTGACTGTTT+AGG | - | chr7.2:13710526-13710545 | MS.gene020350:intron | 30.0% |
!!! | GTTAGACTTTTGTTTCTGTT+CGG | - | chr7.2:13710223-13710242 | MS.gene020350:intron | 30.0% |
CCAATTCTTATGCTTTCATG+AGG | + | chr7.2:13711274-13711293 | None:intergenic | 35.0% | |
GATCAACATAGAAGATACGT+AGG | - | chr7.2:13710419-13710438 | MS.gene020350:intron | 35.0% | |
GGCCTAAACAGTCAAAATAT+TGG | + | chr7.2:13710531-13710550 | None:intergenic | 35.0% | |
TCACATAGGTGAAGCTTAAA+AGG | - | chr7.2:13710299-13710318 | MS.gene020350:intron | 35.0% | |
! | ACGTAGGAACTACATGTTTT+TGG | - | chr7.2:13710435-13710454 | MS.gene020350:intron | 35.0% |
! | AGTTAGGGTTTTGCTCAAAA+AGG | - | chr7.2:13709657-13709676 | MS.gene020350:intron | 35.0% |
! | CATATTTTATGGAAATGGGG+TGG | + | chr7.2:13709907-13709926 | None:intergenic | 35.0% |
! | CCTCATGAAAGCATAAGAAT+TGG | - | chr7.2:13711271-13711290 | MS.gene020350:intron | 35.0% |
! | GTAAAACTAGTTTGCACTGA+CGG | - | chr7.2:13710928-13710947 | MS.gene020350:intron | 35.0% |
! | TAAACTTCCTTTTGCAATCG+AGG | - | chr7.2:13709501-13709520 | MS.gene020350:intron | 35.0% |
! | TTTTGCTCAAAAAGGAGGAT+GGG | - | chr7.2:13709665-13709684 | MS.gene020350:intron | 35.0% |
!! | AAGTGATACTGGCTTTAAGT+TGG | - | chr7.2:13710029-13710048 | MS.gene020350:intron | 35.0% |
!! | AGTGATACTGGCTTTAAGTT+GGG | - | chr7.2:13710030-13710049 | MS.gene020350:intron | 35.0% |
!! | ATATTCCACTTTTATGGCTC+TGG | - | chr7.2:13710124-13710143 | MS.gene020350:intron | 35.0% |
!! | TGAATTTGTAAAAGTGCCAC+TGG | + | chr7.2:13710552-13710571 | None:intergenic | 35.0% |
AACCCTACTTGTGTCGAAAT+TGG | - | chr7.2:13709460-13709479 | MS.gene020350:CDS | 40.0% | |
AACTTACTGGAAGCTATGGA+TGG | + | chr7.2:13709703-13709722 | None:intergenic | 40.0% | |
AAGAATTGGGATGAACCTGA+GGG | - | chr7.2:13711285-13711304 | MS.gene020350:intron | 40.0% | |
ACCCTACTTGTGTCGAAATT+GGG | - | chr7.2:13709461-13709480 | MS.gene020350:CDS | 40.0% | |
ACGATCCACTTCTTTATGCT+TGG | + | chr7.2:13709364-13709383 | None:intergenic | 40.0% | |
ACTCTAAGTCCATCCACAAT+TGG | + | chr7.2:13710186-13710205 | None:intergenic | 40.0% | |
ATAGATGATCTCTCTGGTGT+GGG | + | chr7.2:13711370-13711389 | None:intergenic | 40.0% | |
CTATCATTCCTTGTCTAAGC+CGG | - | chr7.2:13709878-13709897 | MS.gene020350:intron | 40.0% | |
CTCTTTGCATGAAATCACGA+GGG | + | chr7.2:13709633-13709652 | None:intergenic | 40.0% | |
TAAGAATTGGGATGAACCTG+AGG | - | chr7.2:13711284-13711303 | MS.gene020350:intron | 40.0% | |
TCCAAAAAGACTGTTGCTGA+AGG | - | chr7.2:13709406-13709425 | MS.gene020350:CDS | 40.0% | |
TTGTTGATCACAGCTTGACA+AGG | - | chr7.2:13709603-13709622 | MS.gene020350:intron | 40.0% | |
! | AGTAGGGTTTTCGCATGATT+TGG | + | chr7.2:13709449-13709468 | None:intergenic | 40.0% |
! | CTGATTAGTACTGGACCTTA+TGG | - | chr7.2:13709791-13709810 | MS.gene020350:intron | 40.0% |
! | GGATGGACTTAGAGTAGAAT+TGG | - | chr7.2:13710191-13710210 | MS.gene020350:intron | 40.0% |
! | GTTTTGCTCAAAAAGGAGGA+TGG | - | chr7.2:13709664-13709683 | MS.gene020350:intron | 40.0% |
! | TAGGGTTTTGCTCAAAAAGG+AGG | - | chr7.2:13709660-13709679 | MS.gene020350:intron | 40.0% |
! | TCCTTCAGCAACAGTCTTTT+TGG | + | chr7.2:13709410-13709429 | None:intergenic | 40.0% |
!! | TTTCATGAGGGCGTTTGAAT+TGG | + | chr7.2:13711261-13711280 | None:intergenic | 40.0% |
!!! | ATTTTGACTGTTTAGGCCAG+TGG | - | chr7.2:13710533-13710552 | MS.gene020350:intron | 40.0% |
AACCTCACCTCGATTGCAAA+AGG | + | chr7.2:13709511-13709530 | None:intergenic | 45.0% | |
AACCTGTCATCTTGCCATGT+AGG | - | chr7.2:13710843-13710862 | MS.gene020350:intron | 45.0% | |
AATGTTACGCGTTGCAGAGA+TGG | - | chr7.2:13711599-13711618 | MS.gene020350:CDS | 45.0% | |
AGAATTGGGATGAACCTGAG+GGG | - | chr7.2:13711286-13711305 | MS.gene020350:intron | 45.0% | |
CATAGATGATCTCTCTGGTG+TGG | + | chr7.2:13711371-13711390 | None:intergenic | 45.0% | |
CATGCAAAGAGGACGAGTTA+GGG | - | chr7.2:13709642-13709661 | MS.gene020350:intron | 45.0% | |
CCCCAATTTCGACACAAGTA+GGG | + | chr7.2:13709465-13709484 | None:intergenic | 45.0% | |
CCCTACTTGTGTCGAAATTG+GGG | - | chr7.2:13709462-13709481 | MS.gene020350:CDS | 45.0% | |
CCTCGTGATTTCATGCAAAG+AGG | - | chr7.2:13709631-13709650 | MS.gene020350:intron | 45.0% | |
CCTCTTTGCATGAAATCACG+AGG | + | chr7.2:13709634-13709653 | None:intergenic | 45.0% | |
CCTTCCAACAAATCTGGGAA+AGG | - | chr7.2:13711687-13711706 | MS.gene020350:CDS | 45.0% | |
CTGGACCTTCCAACAAATCT+GGG | - | chr7.2:13711682-13711701 | MS.gene020350:CDS | 45.0% | |
GATTTAGGCAGAGAGAGAGA+AGG | - | chr7.2:13711174-13711193 | MS.gene020350:intron | 45.0% | |
GGCGAAGAATACGTTCTTAG+AGG | - | chr7.2:13711225-13711244 | MS.gene020350:intron | 45.0% | |
GTTGCTGAAGGAAGACGAAT+TGG | - | chr7.2:13709418-13709437 | MS.gene020350:CDS | 45.0% | |
TCAACAACAACTGCAACTGC+TGG | - | chr7.2:13711663-13711682 | MS.gene020350:CDS | 45.0% | |
TCATGCAAAGAGGACGAGTT+AGG | - | chr7.2:13709641-13709660 | MS.gene020350:intron | 45.0% | |
TCCAACAAATCTGGGAAAGG+TGG | - | chr7.2:13711690-13711709 | MS.gene020350:CDS | 45.0% | |
TCCACCTTTCCCAGATTTGT+TGG | + | chr7.2:13711694-13711713 | None:intergenic | 45.0% | |
TCCCCAATTTCGACACAAGT+AGG | + | chr7.2:13709466-13709485 | None:intergenic | 45.0% | |
TGAGTCCAGAGCCATAAAAG+TGG | + | chr7.2:13710132-13710151 | None:intergenic | 45.0% | |
TGGTCCTTCCATGGTGTTTA+GGG | + | chr7.2:13711626-13711645 | None:intergenic | 45.0% | |
TTAGTGACACGTCAGCATCA+GGG | + | chr7.2:13709968-13709987 | None:intergenic | 45.0% | |
TTGGTCCTTCCATGGTGTTT+AGG | + | chr7.2:13711627-13711646 | None:intergenic | 45.0% | |
! | ACTCAACACTGGATTGGAAC+TGG | - | chr7.2:13710147-13710166 | MS.gene020350:intron | 45.0% |
! | TTCCTTTTGCAATCGAGGTG+AGG | - | chr7.2:13709506-13709525 | MS.gene020350:intron | 45.0% |
!! | CCTTTCCCAGATTTGTTGGA+AGG | + | chr7.2:13711690-13711709 | None:intergenic | 45.0% |
AAACCCGTTGCACGGTGAAA+AGG | - | chr7.2:13711203-13711222 | MS.gene020350:intron | 50.0% | |
AACCCGTTGCACGGTGAAAA+GGG | - | chr7.2:13711204-13711223 | MS.gene020350:intron | 50.0% | |
CTCTGGACTCAACACTGGAT+TGG | - | chr7.2:13710141-13710160 | MS.gene020350:intron | 50.0% | |
GAATTGGGATGAACCTGAGG+GGG | - | chr7.2:13711287-13711306 | MS.gene020350:intron | 50.0% | |
GACCTACATGGCAAGATGAC+AGG | + | chr7.2:13710848-13710867 | None:intergenic | 50.0% | |
GAGATGGTCCCTAAACACCA+TGG | - | chr7.2:13711615-13711634 | MS.gene020350:CDS | 50.0% | |
GCTGGACCTTCCAACAAATC+TGG | - | chr7.2:13711681-13711700 | MS.gene020350:CDS | 50.0% | |
GGAAACTGAAACCCGTTGCA+CGG | - | chr7.2:13711195-13711214 | MS.gene020350:intron | 50.0% | |
GTTAGTGACACGTCAGCATC+AGG | + | chr7.2:13709969-13709988 | None:intergenic | 50.0% | |
TCATTCCTTGTCTAAGCCGG+AGG | - | chr7.2:13709881-13709900 | MS.gene020350:intron | 50.0% | |
TGATGCAGTCTCCTGCTTCT+TGG | + | chr7.2:13711646-13711665 | None:intergenic | 50.0% | |
TGGTCCCTAAACACCATGGA+AGG | - | chr7.2:13711619-13711638 | MS.gene020350:CDS | 50.0% | |
!! | TATGGCTCTGGACTCAACAC+TGG | - | chr7.2:13710136-13710155 | MS.gene020350:intron | 50.0% |
ATTTCCAGCGGGACGTCTTC+CGG | + | chr7.2:13711328-13711347 | None:intergenic | 55.0% | |
CCATGGAAGGACCAAGAAGC+AGG | - | chr7.2:13711632-13711651 | MS.gene020350:CDS | 55.0% | |
CCTGCTTCTTGGTCCTTCCA+TGG | + | chr7.2:13711635-13711654 | None:intergenic | 55.0% | |
TATGGAAATGGGGTGGCCTC+CGG | + | chr7.2:13709900-13709919 | None:intergenic | 55.0% | |
TGACACGTCAGCATCAGGGT+CGG | + | chr7.2:13709964-13709983 | None:intergenic | 55.0% | |
! | TCGCCCTTTTCACCGTGCAA+CGG | + | chr7.2:13711210-13711229 | None:intergenic | 55.0% |
GACGAAGTTGTCTCCCCCTC+AGG | + | chr7.2:13711303-13711322 | None:intergenic | 60.0% | |
GGGGAGACAACTTCGTCCAC+CGG | - | chr7.2:13711306-13711325 | MS.gene020350:intron | 60.0% | |
! | CGCCCTTTTCACCGTGCAAC+GGG | + | chr7.2:13711209-13711228 | None:intergenic | 60.0% |
GGTGGCCTCCGGCTTAGACA+AGG | + | chr7.2:13709889-13709908 | None:intergenic | 65.0% | |
TCCACCGGAAGACGTCCCGC+TGG | - | chr7.2:13711321-13711340 | MS.gene020350:intron | 70.0% | |
TCCAGCGGGACGTCTTCCGG+TGG | + | chr7.2:13711325-13711344 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 13709346 | 13711728 | 13709346 | ID=MS.gene020350 |
chr7.2 | mRNA | 13709346 | 13711728 | 13709346 | ID=MS.gene020350.t1;Parent=MS.gene020350 |
chr7.2 | exon | 13711552 | 13711728 | 13711552 | ID=MS.gene020350.t1.exon1;Parent=MS.gene020350.t1 |
chr7.2 | CDS | 13711552 | 13711728 | 13711552 | ID=cds.MS.gene020350.t1;Parent=MS.gene020350.t1 |
chr7.2 | exon | 13711359 | 13711458 | 13711359 | ID=MS.gene020350.t1.exon2;Parent=MS.gene020350.t1 |
chr7.2 | CDS | 13711359 | 13711458 | 13711359 | ID=cds.MS.gene020350.t1;Parent=MS.gene020350.t1 |
chr7.2 | exon | 13709346 | 13709485 | 13709346 | ID=MS.gene020350.t1.exon3;Parent=MS.gene020350.t1 |
chr7.2 | CDS | 13709346 | 13709485 | 13709346 | ID=cds.MS.gene020350.t1;Parent=MS.gene020350.t1 |
Gene Sequence |
Protein sequence |