AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene020646

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene020646.t1 MTR_7g102120 99.744 390 1 0 1 390 1 390 0.0 806
MS.gene020646.t1 MTR_1g063060 93.846 390 24 0 1 390 19 408 0.0 739
MS.gene020646.t1 MTR_1g063060 93.846 390 24 0 1 390 1 390 0.0 739
MS.gene020646.t1 MTR_7g110310 88.601 386 44 0 2 387 3 388 0.0 702
MS.gene020646.t1 MTR_2g046710 90.415 386 37 0 2 387 4 389 0.0 702
MS.gene020646.t1 MTR_4g123810 89.896 386 39 0 2 387 4 389 0.0 696
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene020646.t1 AT2G36880 92.821 390 28 0 1 390 1 390 0.0 729
MS.gene020646.t1 AT2G36880 92.821 390 28 0 1 390 1 390 0.0 729
MS.gene020646.t1 AT3G17390 90.439 387 37 0 1 387 1 387 0.0 706
MS.gene020646.t1 AT4G01850 88.630 387 44 0 1 387 1 387 0.0 698
MS.gene020646.t1 AT4G01850 88.630 387 44 0 1 387 1 387 0.0 698
MS.gene020646.t1 AT1G02500 89.664 387 40 0 1 387 1 387 0.0 698
MS.gene020646.t1 AT1G02500 89.664 387 40 0 1 387 1 387 0.0 698

Find 103 sgRNAs with CRISPR-Local

Find 113 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTGCTGCTTACGGCCATTT+TGG 0.183319 7.2:-10568865 MS.gene020646:CDS
CCATCTGGTCGGTTTGTTAT+TGG 0.197743 7.2:-10569258 MS.gene020646:CDS
AATTCCAGACAAGGACATTT+TGG 0.207394 7.2:-10568977 MS.gene020646:CDS
TCACATGCAACTTTACTTTC+TGG 0.213203 7.2:+10569852 None:intergenic
CACATGCAACTTTACTTTCT+GGG 0.255105 7.2:+10569853 None:intergenic
CGAGACACTTGCAGAGGAAT+TGG 0.296576 7.2:-10569750 MS.gene020646:CDS
ACCTGATCACACAGCTTGTC+GGG 0.335375 7.2:+10569912 None:intergenic
CCCTGAAGCTACCACACTTT+TGG 0.336878 7.2:+10569089 None:intergenic
GGCCGTAAGCAGCAGTCTTT+TGG 0.341263 7.2:+10568872 None:intergenic
CCATGGCTCCGTTATCATTC+TGG 0.342771 7.2:+10569430 None:intergenic
GCCAAAAGTGTGGTAGCTTC+AGG 0.346842 7.2:-10569090 MS.gene020646:CDS
AGATTATTGGAAATCATTCC+TGG 0.346876 7.2:+10568925 None:intergenic
CAGGATCATCACGTCCAAAA+TGG 0.354406 7.2:+10568851 None:intergenic
ACTGACATGGTTATGGTCTT+TGG 0.360494 7.2:-10569816 MS.gene020646:CDS
TCAAAAGAGGTGGCAACTTC+AGG 0.361522 7.2:-10568897 MS.gene020646:CDS
AGCTTGCTAACTCAAGCCTT+TGG 0.368398 7.2:+10568796 None:intergenic
CATGGAGGAGGTGCCTTCTC+TGG 0.371602 7.2:-10569165 MS.gene020646:CDS
GTGCAAGTTTCTTATGCAAT+TGG 0.380643 7.2:-10569048 MS.gene020646:CDS
CCACTTCTATCGACCTTGGT+TGG 0.382632 7.2:+10569135 None:intergenic
CTCATAGTTCACAGTAGCCT+TGG 0.390492 7.2:+10569782 None:intergenic
GGCTGGGGTGCACATGGAGG+AGG 0.404143 7.2:-10569177 MS.gene020646:CDS
CACTTCTATCGACCTTGGTT+GGG 0.408524 7.2:+10569136 None:intergenic
TTTGTTGACACATACAAAAC+AGG 0.415934 7.2:-10569003 MS.gene020646:CDS
AGAACCAAAATGTCCTTGTC+TGG 0.421273 7.2:+10568973 None:intergenic
TATGGTGGCTGGGGTGCACA+TGG 0.422018 7.2:-10569183 MS.gene020646:CDS
ACAGTCTCCCAGGTGAAATC+AGG 0.423808 7.2:+10568832 None:intergenic
GATATTGCTCAAGGAGTTCA+TGG 0.429376 7.2:-10569654 MS.gene020646:CDS
TGAACTCCTTGAGCAATATC+AGG 0.430783 7.2:+10569657 None:intergenic
CCCCGACAAGCTGTGTGATC+AGG 0.440463 7.2:-10569913 MS.gene020646:CDS
ACAAAACATGCGCATGGCTT+AGG 0.449886 7.2:-10569485 MS.gene020646:CDS
TACAAAGACTGACATGGTTA+TGG 0.452155 7.2:-10569823 MS.gene020646:CDS
TCTGGTCGGTTTGTTATTGG+TGG 0.458272 7.2:-10569255 MS.gene020646:CDS
GAAGTGGGGCATATATTGTT+AGG 0.460316 7.2:-10569119 MS.gene020646:CDS
GAGTATCTTGACAGTCTCCC+AGG 0.461385 7.2:+10568822 None:intergenic
ACAAATACAGAAAGTGGCTC+TGG 0.466173 7.2:+10569021 None:intergenic
TTTGTTATTGGTGGACCTCA+TGG 0.466434 7.2:-10569246 MS.gene020646:CDS
AGGACAGTGTGCACACGGAT+TGG 0.468164 7.2:+10569405 None:intergenic
TCACCAGCACCAATTTCCTC+TGG 0.468785 7.2:+10569615 None:intergenic
AACCTGATCACACAGCTTGT+CGG 0.469901 7.2:+10569911 None:intergenic
ATCTTCCATCTCAATCCATC+TGG 0.470979 7.2:-10569273 MS.gene020646:CDS
GGACAGTGTGCACACGGATT+GGG 0.473091 7.2:+10569406 None:intergenic
TCTGGTACTCAACAGTAACT+TGG 0.475924 7.2:+10569448 None:intergenic
CCAAAAGTGTGGTAGCTTCA+GGG 0.478895 7.2:-10569089 MS.gene020646:CDS
TTATTGACACCTATGGTGGC+TGG 0.480591 7.2:-10569194 MS.gene020646:CDS
GGTGACCAAGGTCACATGTT+TGG 0.484772 7.2:-10569597 MS.gene020646:CDS
GGTTGGGTCCTTGCCAGAGA+AGG 0.492679 7.2:+10569152 None:intergenic
TATTGACACCTATGGTGGCT+GGG 0.497719 7.2:-10569193 MS.gene020646:CDS
GTGTCAACAAATACAGAAAG+TGG 0.512228 7.2:+10569015 None:intergenic
TGAGTAAGTGGCATTAGCTC+AGG 0.517740 7.2:+10569555 None:intergenic
TACCAAAAGACTGCTGCTTA+CGG 0.520119 7.2:-10568874 MS.gene020646:CDS
GGAAGATAGTCTTGTCATCA+AGG 0.520901 7.2:+10569289 None:intergenic
GGTGGACCTCATGGAGATGC+AGG 0.523297 7.2:-10569237 MS.gene020646:CDS
AAGATCATTATTGACACCTA+TGG 0.523504 7.2:-10569201 MS.gene020646:CDS
CATGGAGATGCAGGACTCAC+TGG 0.526918 7.2:-10569228 MS.gene020646:CDS
GTAACTTGGGTCTTACCATC+AGG 0.530097 7.2:+10569462 None:intergenic
AATAATCTTGACCTCAAAAG+AGG 0.536379 7.2:-10568910 MS.gene020646:CDS
GTAGCAAGCACATGAGTAAG+TGG 0.543954 7.2:+10569543 None:intergenic
TGCCCCACTTCTATCGACCT+TGG 0.546010 7.2:+10569131 None:intergenic
AAACCAGAGGAAATTGGTGC+TGG 0.551112 7.2:-10569618 MS.gene020646:CDS
CATGTGCTTGCTACTAAACT+CGG 0.555316 7.2:-10569534 MS.gene020646:CDS
TGCGCATGGCTTAGGCCTGA+TGG 0.560731 7.2:-10569477 MS.gene020646:CDS
TAGCTCAGGTGTTTCATCTG+TGG 0.560925 7.2:+10569569 None:intergenic
GTGATGATCCTGATTTCACC+TGG 0.563332 7.2:-10568840 MS.gene020646:CDS
GGTGGCTGGGGTGCACATGG+AGG 0.563354 7.2:-10569180 MS.gene020646:CDS
ATGTGCACCCCAGCCACCAT+AGG 0.566173 7.2:+10569185 None:intergenic
GAAATTGGTGCTGGTGACCA+AGG 0.570337 7.2:-10569609 MS.gene020646:CDS
GTTGAGTACCAGAATGATAA+CGG 0.575092 7.2:-10569438 MS.gene020646:CDS
AGATTCTGAGGTGAAGAGGA+AGG 0.575374 7.2:+10569950 None:intergenic
CAAATACAGAAAGTGGCTCT+GGG 0.576109 7.2:+10569022 None:intergenic
TCCATCTCAATCCATCTGGT+CGG 0.577302 7.2:-10569269 MS.gene020646:CDS
CTGCAAACATGCATCAAGGA+TGG 0.580545 7.2:+10569881 None:intergenic
GTGCACACGGATTGGGACCA+TGG 0.581365 7.2:+10569413 None:intergenic
CTGGTACTCAACAGTAACTT+GGG 0.582179 7.2:+10569449 None:intergenic
CATAGCCAAACATGTGACCT+TGG 0.582504 7.2:+10569592 None:intergenic
TTACAGATTCTGAGGTGAAG+AGG 0.583165 7.2:+10569946 None:intergenic
CAAAGTCCTGATATTGCTCA+AGG 0.584881 7.2:-10569663 MS.gene020646:CDS
ATTGACACCTATGGTGGCTG+GGG 0.585915 7.2:-10569192 MS.gene020646:CDS
ACCTTCGTTTACAGATTCTG+AGG 0.589403 7.2:+10569938 None:intergenic
CAACCAAGGTCGATAGAAGT+GGG 0.589471 7.2:-10569134 MS.gene020646:CDS
AGGAGGTGCCTTCTCTGGCA+AGG 0.599631 7.2:-10569160 MS.gene020646:CDS
CCAACCAAGGTCGATAGAAG+TGG 0.601493 7.2:-10569135 MS.gene020646:CDS
ATCATTATTGACACCTATGG+TGG 0.611359 7.2:-10569198 MS.gene020646:CDS
CTTGCTGCAAACATGCATCA+AGG 0.611540 7.2:+10569877 None:intergenic
CCAATAACAAACCGACCAGA+TGG 0.611757 7.2:+10569258 None:intergenic
AGATGAGGACAGTGTGCACA+CGG 0.613951 7.2:+10569400 None:intergenic
CATCGTGCTGAGTTGAGATG+AGG 0.617276 7.2:+10569385 None:intergenic
ACCGACCAGATGGATTGAGA+TGG 0.617816 7.2:+10569268 None:intergenic
CCAGAATGATAACGGAGCCA+TGG 0.619445 7.2:-10569430 MS.gene020646:CDS
GGATTCGTATCAGCTGATGT+TGG 0.619951 7.2:-10569729 MS.gene020646:CDS
GAAAGAACAAAACATGCGCA+TGG 0.625968 7.2:-10569491 MS.gene020646:CDS
AATCTTGACCTCAAAAGAGG+TGG 0.633225 7.2:-10568907 MS.gene020646:CDS
CTCTGGCAAGGACCCAACCA+AGG 0.634793 7.2:-10569148 MS.gene020646:CDS
GAGATGCAGGACTCACTGGT+AGG 0.648576 7.2:-10569224 MS.gene020646:CDS
ACCTCAGAATCTGTAAACGA+AGG 0.649053 7.2:-10569939 MS.gene020646:CDS
CCTGATCACACAGCTTGTCG+GGG 0.668924 7.2:+10569913 None:intergenic
TGATGATCCTGATTTCACCT+GGG 0.678075 7.2:-10568839 MS.gene020646:CDS
TGTCAAGATACTCAAGCCAA+AGG 0.679722 7.2:-10568812 MS.gene020646:CDS
ATAGTTCGAGACACTTGCAG+AGG 0.698300 7.2:-10569756 MS.gene020646:CDS
AACCAAGGTCGATAGAAGTG+GGG 0.698373 7.2:-10569133 MS.gene020646:CDS
CTTTGGTGAGATAACAACCA+AGG 0.702167 7.2:-10569799 MS.gene020646:CDS
TAGGCAAGCAGCCAAAAGTG+TGG 0.702229 7.2:-10569100 MS.gene020646:CDS
GTGAGTCCTGCATCTCCATG+AGG 0.711004 7.2:+10569231 None:intergenic
GACATGTACAAAGACTGACA+TGG 0.773101 7.2:-10569829 MS.gene020646:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
AAGATCATTATTGACACCTA+TGG - chr7.2:10569563-10569582 MS.gene020646:CDS 30.0%
AATAATCTTGACCTCAAAAG+AGG - chr7.2:10569854-10569873 MS.gene020646:CDS 30.0%
AGATTATTGGAAATCATTCC+TGG + chr7.2:10569842-10569861 None:intergenic 30.0%
TTTGTTGACACATACAAAAC+AGG - chr7.2:10569761-10569780 MS.gene020646:CDS 30.0%
!!! TCTTTTGAGGTCAAGATTAT+TGG + chr7.2:10569855-10569874 None:intergenic 30.0%
!!! TTAAAGAGCATTTTGACTTC+AGG - chr7.2:10569816-10569835 MS.gene020646:CDS 30.0%
AACAGGAAAAATTCCAGACA+AGG - chr7.2:10569778-10569797 MS.gene020646:CDS 35.0%
ACCAAAAAACCAGAGGAAAT+TGG - chr7.2:10569140-10569159 MS.gene020646:CDS 35.0%
ATCATTATTGACACCTATGG+TGG - chr7.2:10569566-10569585 MS.gene020646:CDS 35.0%
CACATGCAACTTTACTTTCT+GGG + chr7.2:10568914-10568933 None:intergenic 35.0%
GTGCAAGTTTCTTATGCAAT+TGG - chr7.2:10569716-10569735 MS.gene020646:CDS 35.0%
GTGTCAACAAATACAGAAAG+TGG + chr7.2:10569752-10569771 None:intergenic 35.0%
GTTGAGTACCAGAATGATAA+CGG - chr7.2:10569326-10569345 MS.gene020646:CDS 35.0%
TACAAAGACTGACATGGTTA+TGG - chr7.2:10568941-10568960 MS.gene020646:CDS 35.0%
TCACATGCAACTTTACTTTC+TGG + chr7.2:10568915-10568934 None:intergenic 35.0%
! AATTCCAGACAAGGACATTT+TGG - chr7.2:10569787-10569806 MS.gene020646:CDS 35.0%
!! TGTCATCAAGGTATTTTGCT+GGG + chr7.2:10569466-10569485 None:intergenic 35.0%
!! TTGTCATCAAGGTATTTTGC+TGG + chr7.2:10569467-10569486 None:intergenic 35.0%
!!! ACCAATTTCCTCTGGTTTTT+TGG + chr7.2:10569144-10569163 None:intergenic 35.0%
AATCTTGACCTCAAAAGAGG+TGG - chr7.2:10569857-10569876 MS.gene020646:CDS 40.0%
ACAAATACAGAAAGTGGCTC+TGG + chr7.2:10569746-10569765 None:intergenic 40.0%
ACCTCAGAATCTGTAAACGA+AGG - chr7.2:10568825-10568844 MS.gene020646:CDS 40.0%
ACCTTCGTTTACAGATTCTG+AGG + chr7.2:10568829-10568848 None:intergenic 40.0%
ACTGACATGGTTATGGTCTT+TGG - chr7.2:10568948-10568967 MS.gene020646:CDS 40.0%
AGAACCAAAATGTCCTTGTC+TGG + chr7.2:10569794-10569813 None:intergenic 40.0%
ATCTTCCATCTCAATCCATC+TGG - chr7.2:10569491-10569510 MS.gene020646:CDS 40.0%
CAAAGTCCTGATATTGCTCA+AGG - chr7.2:10569101-10569120 MS.gene020646:CDS 40.0%
CAAATACAGAAAGTGGCTCT+GGG + chr7.2:10569745-10569764 None:intergenic 40.0%
CTGGTACTCAACAGTAACTT+GGG + chr7.2:10569318-10569337 None:intergenic 40.0%
CTTTGGTGAGATAACAACCA+AGG - chr7.2:10568965-10568984 MS.gene020646:CDS 40.0%
GAAAGAACAAAACATGCGCA+TGG - chr7.2:10569273-10569292 MS.gene020646:CDS 40.0%
GAAGTGGGGCATATATTGTT+AGG - chr7.2:10569645-10569664 MS.gene020646:CDS 40.0%
GACATGTACAAAGACTGACA+TGG - chr7.2:10568935-10568954 MS.gene020646:CDS 40.0%
GATATTGCTCAAGGAGTTCA+TGG - chr7.2:10569110-10569129 MS.gene020646:CDS 40.0%
TCACTTGACCAAAAAACCAG+AGG - chr7.2:10569133-10569152 MS.gene020646:CDS 40.0%
TCTGGTACTCAACAGTAACT+TGG + chr7.2:10569319-10569338 None:intergenic 40.0%
TGAACTCCTTGAGCAATATC+AGG + chr7.2:10569110-10569129 None:intergenic 40.0%
TGATGATCCTGATTTCACCT+GGG - chr7.2:10569925-10569944 MS.gene020646:CDS 40.0%
TGTCAAGATACTCAAGCCAA+AGG - chr7.2:10569952-10569971 MS.gene020646:CDS 40.0%
! AGGTATTTTGCTGGGATAAC+AGG + chr7.2:10569458-10569477 None:intergenic 40.0%
! CATGTGCTTGCTACTAAACT+CGG - chr7.2:10569230-10569249 MS.gene020646:CDS 40.0%
! TACCAAAAGACTGCTGCTTA+CGG - chr7.2:10569890-10569909 MS.gene020646:CDS 40.0%
!! GGAAGATAGTCTTGTCATCA+AGG + chr7.2:10569478-10569497 None:intergenic 40.0%
!! TTACAGATTCTGAGGTGAAG+AGG + chr7.2:10568821-10568840 None:intergenic 40.0%
!! TTTGTTATTGGTGGACCTCA+TGG - chr7.2:10569518-10569537 MS.gene020646:CDS 40.0%
AAACCAGAGGAAATTGGTGC+TGG - chr7.2:10569146-10569165 MS.gene020646:CDS 45.0%
AACCAAGGTCGATAGAAGTG+GGG - chr7.2:10569631-10569650 MS.gene020646:CDS 45.0%
AACCTGATCACACAGCTTGT+CGG + chr7.2:10568856-10568875 None:intergenic 45.0%
ACAAAACATGCGCATGGCTT+AGG - chr7.2:10569279-10569298 MS.gene020646:CDS 45.0%
ATAGTTCGAGACACTTGCAG+AGG - chr7.2:10569008-10569027 MS.gene020646:CDS 45.0%
CAACCAAGGTCGATAGAAGT+GGG - chr7.2:10569630-10569649 MS.gene020646:CDS 45.0%
CACTTCTATCGACCTTGGTT+GGG + chr7.2:10569631-10569650 None:intergenic 45.0%
CAGGATCATCACGTCCAAAA+TGG + chr7.2:10569916-10569935 None:intergenic 45.0%
CATAGCCAAACATGTGACCT+TGG + chr7.2:10569175-10569194 None:intergenic 45.0%
CCAATAACAAACCGACCAGA+TGG + chr7.2:10569509-10569528 None:intergenic 45.0%
CTCATAGTTCACAGTAGCCT+TGG + chr7.2:10568985-10569004 None:intergenic 45.0%
CTGCAAACATGCATCAAGGA+TGG + chr7.2:10568886-10568905 None:intergenic 45.0%
CTTGCTGCAAACATGCATCA+AGG + chr7.2:10568890-10568909 None:intergenic 45.0%
GGATTCGTATCAGCTGATGT+TGG - chr7.2:10569035-10569054 MS.gene020646:CDS 45.0%
GTAACTTGGGTCTTACCATC+AGG + chr7.2:10569305-10569324 None:intergenic 45.0%
GTAGCAAGCACATGAGTAAG+TGG + chr7.2:10569224-10569243 None:intergenic 45.0%
GTGATGATCCTGATTTCACC+TGG - chr7.2:10569924-10569943 MS.gene020646:CDS 45.0%
TAGCTCAGGTGTTTCATCTG+TGG + chr7.2:10569198-10569217 None:intergenic 45.0%
TATTGACACCTATGGTGGCT+GGG - chr7.2:10569571-10569590 MS.gene020646:CDS 45.0%
TCAAAAGAGGTGGCAACTTC+AGG - chr7.2:10569867-10569886 MS.gene020646:CDS 45.0%
TCCATCTCAATCCATCTGGT+CGG - chr7.2:10569495-10569514 MS.gene020646:CDS 45.0%
TGAGTAAGTGGCATTAGCTC+AGG + chr7.2:10569212-10569231 None:intergenic 45.0%
TTATTGACACCTATGGTGGC+TGG - chr7.2:10569570-10569589 MS.gene020646:CDS 45.0%
! CCAAAAGTGTGGTAGCTTCA+GGG - chr7.2:10569675-10569694 MS.gene020646:CDS 45.0%
! TGAAGTTGCCACCTCTTTTG+AGG + chr7.2:10569868-10569887 None:intergenic 45.0%
!! AGATTCTGAGGTGAAGAGGA+AGG + chr7.2:10568817-10568836 None:intergenic 45.0%
!! CCATCTGGTCGGTTTGTTAT+TGG - chr7.2:10569506-10569525 MS.gene020646:CDS 45.0%
!! TCTGGTCGGTTTGTTATTGG+TGG - chr7.2:10569509-10569528 MS.gene020646:CDS 45.0%
ACAGTCTCCCAGGTGAAATC+AGG + chr7.2:10569935-10569954 None:intergenic 50.0%
ACCTGATCACACAGCTTGTC+GGG + chr7.2:10568855-10568874 None:intergenic 50.0%
AGATGAGGACAGTGTGCACA+CGG + chr7.2:10569367-10569386 None:intergenic 50.0%
ATTGACACCTATGGTGGCTG+GGG - chr7.2:10569572-10569591 MS.gene020646:CDS 50.0%
CCAACCAAGGTCGATAGAAG+TGG - chr7.2:10569629-10569648 MS.gene020646:CDS 50.0%
CCACTTCTATCGACCTTGGT+TGG + chr7.2:10569632-10569651 None:intergenic 50.0%
CCATGGCTCCGTTATCATTC+TGG + chr7.2:10569337-10569356 None:intergenic 50.0%
CGAGACACTTGCAGAGGAAT+TGG - chr7.2:10569014-10569033 MS.gene020646:CDS 50.0%
GAGTATCTTGACAGTCTCCC+AGG + chr7.2:10569945-10569964 None:intergenic 50.0%
GGTGACCAAGGTCACATGTT+TGG - chr7.2:10569167-10569186 MS.gene020646:CDS 50.0%
TAGGCAAGCAGCCAAAAGTG+TGG - chr7.2:10569664-10569683 MS.gene020646:CDS 50.0%
TCACCAGCACCAATTTCCTC+TGG + chr7.2:10569152-10569171 None:intergenic 50.0%
! CATCGTGCTGAGTTGAGATG+AGG + chr7.2:10569382-10569401 None:intergenic 50.0%
! CCCTGAAGCTACCACACTTT+TGG + chr7.2:10569678-10569697 None:intergenic 50.0%
! GCCAAAAGTGTGGTAGCTTC+AGG - chr7.2:10569674-10569693 MS.gene020646:CDS 50.0%
!! ACCGACCAGATGGATTGAGA+TGG + chr7.2:10569499-10569518 None:intergenic 50.0%
!! ACTGCTGCTTACGGCCATTT+TGG - chr7.2:10569899-10569918 MS.gene020646:CDS 50.0%
!! CCAGAATGATAACGGAGCCA+TGG - chr7.2:10569334-10569353 MS.gene020646:CDS 50.0%
!! GAAATTGGTGCTGGTGACCA+AGG - chr7.2:10569155-10569174 MS.gene020646:CDS 50.0%
!!! GAGCATTTTGACTTCAGGCC+AGG - chr7.2:10569821-10569840 MS.gene020646:CDS 50.0%
AGGACAGTGTGCACACGGAT+TGG + chr7.2:10569362-10569381 None:intergenic 55.0%
CATGGAGATGCAGGACTCAC+TGG - chr7.2:10569536-10569555 MS.gene020646:CDS 55.0%
CCTGATCACACAGCTTGTCG+GGG + chr7.2:10568854-10568873 None:intergenic 55.0%
GAGATGCAGGACTCACTGGT+AGG - chr7.2:10569540-10569559 MS.gene020646:CDS 55.0%
GGACAGTGTGCACACGGATT+GGG + chr7.2:10569361-10569380 None:intergenic 55.0%
GTGAGTCCTGCATCTCCATG+AGG + chr7.2:10569536-10569555 None:intergenic 55.0%
TGCCCCACTTCTATCGACCT+TGG + chr7.2:10569636-10569655 None:intergenic 55.0%
! GGCCGTAAGCAGCAGTCTTT+TGG + chr7.2:10569895-10569914 None:intergenic 55.0%
ATGTGCACCCCAGCCACCAT+AGG + chr7.2:10569582-10569601 None:intergenic 60.0%
CCCCGACAAGCTGTGTGATC+AGG - chr7.2:10568851-10568870 MS.gene020646:CDS 60.0%
CTCTGGCAAGGACCCAACCA+AGG - chr7.2:10569616-10569635 MS.gene020646:CDS 60.0%
GGTGGACCTCATGGAGATGC+AGG - chr7.2:10569527-10569546 MS.gene020646:CDS 60.0%
GGTTGGGTCCTTGCCAGAGA+AGG + chr7.2:10569615-10569634 None:intergenic 60.0%
TATGGTGGCTGGGGTGCACA+TGG - chr7.2:10569581-10569600 MS.gene020646:CDS 60.0%
TGCGCATGGCTTAGGCCTGA+TGG - chr7.2:10569287-10569306 MS.gene020646:CDS 60.0%
!! AGGAGGTGCCTTCTCTGGCA+AGG - chr7.2:10569604-10569623 MS.gene020646:CDS 60.0%
!! CATGGAGGAGGTGCCTTCTC+TGG - chr7.2:10569599-10569618 MS.gene020646:CDS 60.0%
!! GTGCACACGGATTGGGACCA+TGG + chr7.2:10569354-10569373 None:intergenic 60.0%
GGCTGGGGTGCACATGGAGG+AGG - chr7.2:10569587-10569606 MS.gene020646:CDS 70.0%
GGTGGCTGGGGTGCACATGG+AGG - chr7.2:10569584-10569603 MS.gene020646:CDS 70.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 10568807 10569979 10568807 ID=MS.gene020646
chr7.2 mRNA 10568807 10569979 10568807 ID=MS.gene020646.t1;Parent=MS.gene020646
chr7.2 exon 10568807 10569979 10568807 ID=MS.gene020646.t1.exon1;Parent=MS.gene020646.t1
chr7.2 CDS 10568807 10569979 10568807 ID=cds.MS.gene020646.t1;Parent=MS.gene020646.t1
Gene Sequence

>MS.gene020646

ATGGAAACCTTCCTCTTCACCTCAGAATCTGTAAACGAAGGTCACCCCGACAAGCTGTGTGATCAGGTTTCAGATGCCATCCTTGATGCATGTTTGCAGCAAGACCCAGAAAGTAAAGTTGCATGTGAGACATGTACAAAGACTGACATGGTTATGGTCTTTGGTGAGATAACAACCAAGGCTACTGTGAACTATGAGAAAATAGTTCGAGACACTTGCAGAGGAATTGGATTCGTATCAGCTGATGTTGGTCTTGATGCTGATAACTGCAAAGTTCTTGTCAACATTGAGCAACAAAGTCCTGATATTGCTCAAGGAGTTCATGGTCACTTGACCAAAAAACCAGAGGAAATTGGTGCTGGTGACCAAGGTCACATGTTTGGCTATGCCACAGATGAAACACCTGAGCTAATGCCACTTACTCATGTGCTTGCTACTAAACTCGGTGCAAAGCTCACTGAAGTTAGAAAGAACAAAACATGCGCATGGCTTAGGCCTGATGGTAAGACCCAAGTTACTGTTGAGTACCAGAATGATAACGGAGCCATGGTCCCAATCCGTGTGCACACTGTCCTCATCTCAACTCAGCACGATGAAACTGTCACAAATGAAAAAATTGCTGCAGATTTAAAAGAGCATGTGATTAAACCTGTTATCCCAGCAAAATACCTTGATGACAAGACTATCTTCCATCTCAATCCATCTGGTCGGTTTGTTATTGGTGGACCTCATGGAGATGCAGGACTCACTGGTAGGAAGATCATTATTGACACCTATGGTGGCTGGGGTGCACATGGAGGAGGTGCCTTCTCTGGCAAGGACCCAACCAAGGTCGATAGAAGTGGGGCATATATTGTTAGGCAAGCAGCCAAAAGTGTGGTAGCTTCAGGGCTTGCAAGACGTTGCATTGTGCAAGTTTCTTATGCAATTGGAGTCCCAGAGCCACTTTCTGTATTTGTTGACACATACAAAACAGGAAAAATTCCAGACAAGGACATTTTGGTTCTTATTAAAGAGCATTTTGACTTCAGGCCAGGAATGATTTCCAATAATCTTGACCTCAAAAGAGGTGGCAACTTCAGGTACCAAAAGACTGCTGCTTACGGCCATTTTGGACGTGATGATCCTGATTTCACCTGGGAGACTGTCAAGATACTCAAGCCAAAGGCTTGA
Protein sequence

>MS.gene020646.t1

METFLFTSESVNEGHPDKLCDQVSDAILDACLQQDPESKVACETCTKTDMVMVFGEITTKATVNYEKIVRDTCRGIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNKTCAWLRPDGKTQVTVEYQNDNGAMVPIRVHTVLISTQHDETVTNEKIAADLKEHVIKPVIPAKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVPEPLSVFVDTYKTGKIPDKDILVLIKEHFDFRPGMISNNLDLKRGGNFRYQKTAAYGHFGRDDPDFTWETVKILKPKA