Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020669.t1 | XP_003617676.1 | 93.8 | 754 | 47 | 0 | 1 | 754 | 1 | 754 | 0.00E+00 | 1382.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020669.t1 | Q9FJ62 | 54.7 | 764 | 328 | 8 | 3 | 754 | 9 | 766 | 2.5e-234 | 813.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020669.t1 | G7K4B9 | 93.8 | 754 | 47 | 0 | 1 | 754 | 1 | 754 | 0.0e+00 | 1382.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene62515 | MS.gene020669 | PPI |
| MS.gene81414 | MS.gene020669 | PPI |
| MS.gene63842 | MS.gene020669 | PPI |
| MS.gene060072 | MS.gene020669 | PPI |
| MS.gene64603 | MS.gene020669 | PPI |
| MS.gene020669 | MS.gene79189 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020669.t1 | MTR_5g094230 | 93.767 | 754 | 47 | 0 | 1 | 754 | 1 | 754 | 0.0 | 1375 |
| MS.gene020669.t1 | MTR_5g094230 | 93.636 | 660 | 41 | 1 | 1 | 660 | 1 | 659 | 0.0 | 1224 |
| MS.gene020669.t1 | MTR_3g055610 | 60.172 | 698 | 266 | 4 | 16 | 712 | 21 | 707 | 0.0 | 840 |
| MS.gene020669.t1 | MTR_2g450160 | 46.254 | 694 | 354 | 12 | 29 | 714 | 185 | 867 | 0.0 | 585 |
| MS.gene020669.t1 | MTR_4g131380 | 43.862 | 725 | 387 | 14 | 29 | 752 | 44 | 749 | 0.0 | 541 |
| MS.gene020669.t1 | MTR_4g109600 | 27.350 | 351 | 216 | 15 | 14 | 331 | 11 | 355 | 3.58e-19 | 90.9 |
| MS.gene020669.t1 | MTR_4g109600 | 24.000 | 325 | 214 | 8 | 358 | 657 | 48 | 364 | 4.15e-18 | 87.8 |
| MS.gene020669.t1 | MTR_4g109600 | 28.571 | 182 | 112 | 6 | 14 | 180 | 11 | 189 | 1.07e-11 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020669.t1 | AT5G55480 | 54.712 | 764 | 328 | 8 | 3 | 754 | 9 | 766 | 0.0 | 848 |
| MS.gene020669.t1 | AT4G26690 | 56.528 | 743 | 317 | 4 | 15 | 754 | 20 | 759 | 0.0 | 845 |
| MS.gene020669.t1 | AT1G66970 | 55.785 | 726 | 314 | 4 | 13 | 734 | 26 | 748 | 0.0 | 829 |
| MS.gene020669.t1 | AT1G66970 | 54.144 | 748 | 314 | 5 | 13 | 734 | 26 | 770 | 0.0 | 816 |
| MS.gene020669.t1 | AT1G66980 | 54.597 | 707 | 314 | 5 | 13 | 716 | 27 | 729 | 0.0 | 788 |
| MS.gene020669.t1 | AT1G66980 | 54.597 | 707 | 314 | 5 | 13 | 716 | 27 | 729 | 0.0 | 787 |
| MS.gene020669.t1 | AT1G66980 | 52.446 | 736 | 314 | 6 | 13 | 716 | 27 | 758 | 0.0 | 774 |
| MS.gene020669.t1 | AT1G66980 | 52.900 | 707 | 309 | 6 | 13 | 716 | 27 | 712 | 0.0 | 750 |
| MS.gene020669.t1 | AT3G20520 | 49.603 | 756 | 339 | 13 | 1 | 742 | 1 | 728 | 0.0 | 704 |
| MS.gene020669.t1 | AT5G58050 | 46.993 | 715 | 371 | 6 | 29 | 742 | 33 | 740 | 0.0 | 663 |
| MS.gene020669.t1 | AT5G58170 | 46.483 | 725 | 379 | 7 | 29 | 751 | 33 | 750 | 0.0 | 662 |
| MS.gene020669.t1 | AT1G66970 | 57.838 | 555 | 229 | 3 | 184 | 734 | 1 | 554 | 0.0 | 651 |
| MS.gene020669.t1 | AT1G74210 | 25.485 | 361 | 229 | 10 | 358 | 693 | 47 | 392 | 3.92e-21 | 97.1 |
| MS.gene020669.t1 | AT5G08030 | 23.647 | 351 | 229 | 10 | 335 | 659 | 28 | 365 | 1.95e-19 | 91.3 |
| MS.gene020669.t1 | AT5G08030 | 25.948 | 343 | 214 | 14 | 17 | 331 | 24 | 354 | 2.00e-16 | 82.4 |
| MS.gene020669.t1 | AT5G08030 | 23.647 | 351 | 229 | 10 | 335 | 659 | 43 | 380 | 2.45e-19 | 91.3 |
| MS.gene020669.t1 | AT5G08030 | 25.948 | 343 | 214 | 14 | 17 | 331 | 39 | 369 | 2.92e-16 | 82.0 |
Find 162 sgRNAs with CRISPR-Local
Find 383 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCTTACGCTGTGCGTTTC+CGG | 0.111879 | 5.4:-73964325 | None:intergenic |
| AAATAAAACTATGAATTATT+TGG | 0.161651 | 5.4:+73959408 | MS.gene020669:CDS |
| ACTATGAATTATTTGGTTAA+TGG | 0.169991 | 5.4:+73959415 | MS.gene020669:CDS |
| GTCCCATCGTTCTTAGCTTT+TGG | 0.221469 | 5.4:-73962213 | None:intergenic |
| GGGGACTTGGTTCCGGCAGC+AGG | 0.249174 | 5.4:-73964300 | None:intergenic |
| ATTGCTTCGGATGGAGTTAA+AGG | 0.260576 | 5.4:-73960359 | None:intergenic |
| GGAGATCAACTCGTTTATTC+AGG | 0.277238 | 5.4:+73963550 | MS.gene020669:CDS |
| TAGTGACTCTGCTTACATTT+TGG | 0.288259 | 5.4:+73959261 | MS.gene020669:CDS |
| TTTATCAAGACGTTTGCTTC+TGG | 0.293432 | 5.4:+73960110 | MS.gene020669:CDS |
| TCAAACTCTACTGACATTTC+CGG | 0.294696 | 5.4:+73959376 | MS.gene020669:CDS |
| AAACAACGAAACTTGTCTTT+AGG | 0.308071 | 5.4:+73960018 | MS.gene020669:CDS |
| GTTACAAAGCCTGCATTCTT+AGG | 0.310121 | 5.4:-73963413 | None:intergenic |
| TCTACAACCACATACCTCTT+TGG | 0.317456 | 5.4:+73960181 | MS.gene020669:CDS |
| CTGGTAGACAAGCTCGTATT+TGG | 0.319764 | 5.4:-73963297 | None:intergenic |
| TGCGTTTCCGGGTGGGGACT+TGG | 0.323178 | 5.4:-73964313 | None:intergenic |
| TTGACGTGGAACGATATAAA+AGG | 0.338935 | 5.4:+73961781 | MS.gene020669:CDS |
| TCCGGGTGGGGACTTGGTTC+CGG | 0.339707 | 5.4:-73964307 | None:intergenic |
| TCTCAAAATACACATTGTTC+AGG | 0.340050 | 5.4:+73962187 | MS.gene020669:CDS |
| TGTCTTTAGGTTTCTCAATC+AGG | 0.343222 | 5.4:+73960031 | MS.gene020669:CDS |
| ACCTTACGCTGTGCGTTTCC+GGG | 0.347941 | 5.4:-73964324 | None:intergenic |
| TTTCCCTGCAGCCTCAATAT+TGG | 0.348515 | 5.4:+73962158 | MS.gene020669:intron |
| CCGTCCTTTGACAATTGAAC+AGG | 0.364554 | 5.4:-73961634 | None:intergenic |
| ACCTTGATTATCTCAAAGTA+TGG | 0.371442 | 5.4:+73961532 | MS.gene020669:CDS |
| AGGTTTGTGGTTGAACATTC+AGG | 0.373506 | 5.4:+73959775 | MS.gene020669:CDS |
| GTGTGTTATTACCCAAGTTT+AGG | 0.374182 | 5.4:-73964122 | None:intergenic |
| AAAAGACTTCCTGGTTGAAC+AGG | 0.375785 | 5.4:-73964159 | None:intergenic |
| CCATCAACCAATCAGACTTA+TGG | 0.375817 | 5.4:+73960065 | MS.gene020669:CDS |
| GCACACCCAATGCCGCTCTA+TGG | 0.381165 | 5.4:+73959296 | MS.gene020669:CDS |
| GAGTTTGAAAGGTTGAGATC+TGG | 0.385464 | 5.4:-73959361 | None:intergenic |
| CAATGAACCATAAGTCTGAT+TGG | 0.392275 | 5.4:-73960072 | None:intergenic |
| TTAACTCCATCCGAAGCAAT+AGG | 0.402132 | 5.4:+73960362 | MS.gene020669:CDS |
| GTCTCAGACGCGCATAAAGC+GGG | 0.404052 | 5.4:+73960203 | MS.gene020669:CDS |
| GGAGGGAGTGGAGCCATAGC+TGG | 0.404849 | 5.4:-73964210 | None:intergenic |
| CAGCAATGAGTTTGTATCTC+AGG | 0.417176 | 5.4:+73963499 | MS.gene020669:CDS |
| AACCACAAACCTGGTGTTTG+TGG | 0.421581 | 5.4:-73959764 | None:intergenic |
| CCACGGCCAGATTTGATCTC+AGG | 0.423046 | 5.4:-73961742 | None:intergenic |
| ACTCGCCGTTATCAATGAAT+TGG | 0.424311 | 5.4:-73960307 | None:intergenic |
| AGCTACAAACACAGCAAGAC+TGG | 0.428801 | 5.4:-73964367 | None:intergenic |
| AATTGACGAAAGATGCATTT+GGG | 0.429339 | 5.4:+73959329 | MS.gene020669:CDS |
| CACCGACACTCTCGTCAATC+TGG | 0.430471 | 5.4:-73963316 | None:intergenic |
| CAGTAGTACAGAGCTATTAG+TGG | 0.434008 | 5.4:-73963258 | None:intergenic |
| TTCTGGAATTCTTGTTCCCA+AGG | 0.435786 | 5.4:+73960127 | MS.gene020669:CDS |
| ACCACAAACCTGGTGTTTGT+GGG | 0.438220 | 5.4:-73959763 | None:intergenic |
| TAAAATTATTGCCATCAAGA+AGG | 0.438448 | 5.4:-73959703 | None:intergenic |
| CCCCACAAACACCAGGTTTG+TGG | 0.442553 | 5.4:+73959762 | MS.gene020669:CDS |
| TTCCACAATGTTTGTTTGGG+TGG | 0.446707 | 5.4:-73963435 | None:intergenic |
| TACGCTGTGCGTTTCCGGGT+GGG | 0.451111 | 5.4:-73964320 | None:intergenic |
| AGGAAACAAATGCCTAAACT+TGG | 0.454432 | 5.4:+73964110 | MS.gene020669:intron |
| CAATTGACGAAAGATGCATT+TGG | 0.454486 | 5.4:+73959328 | MS.gene020669:CDS |
| TACAGGCCATATGTATCCCT+TGG | 0.455587 | 5.4:-73960144 | None:intergenic |
| CCGGCAGCAGGGCTAACAGC+TGG | 0.455897 | 5.4:-73964288 | None:intergenic |
| ATCACACCATAGAGCGGCAT+TGG | 0.456467 | 5.4:-73959302 | None:intergenic |
| TAAGCAGAGTCACTAGAATC+AGG | 0.457095 | 5.4:-73959253 | None:intergenic |
| ATTAATGCTTTAAGTAAAGC+AGG | 0.459192 | 5.4:+73963197 | MS.gene020669:CDS |
| ACGCTGTGCGTTTCCGGGTG+GGG | 0.462945 | 5.4:-73964319 | None:intergenic |
| AAAATTATTGCCATCAAGAA+GGG | 0.463118 | 5.4:-73959702 | None:intergenic |
| AACGGCGAGTTCACCGTTGA+TGG | 0.464152 | 5.4:+73960320 | MS.gene020669:CDS |
| CTCTGTACTACTGAAGTTCA+AGG | 0.467715 | 5.4:+73963268 | MS.gene020669:CDS |
| CGATGACGTACTCAAATTAG+TGG | 0.468576 | 5.4:+73959739 | MS.gene020669:CDS |
| GGTTGAACAGGTTGCATGTA+GGG | 0.469907 | 5.4:-73964147 | None:intergenic |
| AACATCCACACCATCTTGTA+TGG | 0.470788 | 5.4:-73961602 | None:intergenic |
| AGTGTCCCTGAGATCAAATC+TGG | 0.477767 | 5.4:+73961736 | MS.gene020669:CDS |
| AGCCTATCTTGCAGAAAAGC+AGG | 0.479317 | 5.4:+73963151 | MS.gene020669:CDS |
| GGCCTTGTTATATGCTAAGT+TGG | 0.479777 | 5.4:-73961581 | None:intergenic |
| TAGAGCGGCATTGGGTGTGC+TGG | 0.482512 | 5.4:-73959293 | None:intergenic |
| TTGTTCCCAAGGGATACATA+TGG | 0.482867 | 5.4:+73960138 | MS.gene020669:CDS |
| TCTTTAGTCAAGGGAGGGAG+TGG | 0.485453 | 5.4:-73964222 | None:intergenic |
| TCAGTATTTCCTAAGAATGC+AGG | 0.488361 | 5.4:+73963404 | MS.gene020669:CDS |
| AGTAGGTCACCCCTTCTTGA+TGG | 0.490247 | 5.4:+73959692 | MS.gene020669:CDS |
| AACTAACCTATTGCTTCGGA+TGG | 0.492784 | 5.4:-73960368 | None:intergenic |
| TATATTTCATCACCTGAGGC+TGG | 0.492792 | 5.4:+73959960 | MS.gene020669:CDS |
| TCCATACTTTGAGATAATCA+AGG | 0.493201 | 5.4:-73961533 | None:intergenic |
| ACCCGGAAACGCACAGCGTA+AGG | 0.493738 | 5.4:+73964323 | MS.gene020669:CDS |
| AAATAACTAACCTATTGCTT+CGG | 0.495365 | 5.4:-73960372 | None:intergenic |
| AGACGCGCATAAAGCGGGGC+TGG | 0.495580 | 5.4:+73960208 | MS.gene020669:CDS |
| TACGTCATTGCCTCCAGCTA+TGG | 0.500167 | 5.4:+73964197 | MS.gene020669:CDS |
| CCATAAGTCTGATTGGTTGA+TGG | 0.501602 | 5.4:-73960065 | None:intergenic |
| TGAGAAAGGGGCCAATATTG+AGG | 0.506432 | 5.4:-73962169 | None:intergenic |
| CGCCGTTATCAATGAATTGG+AGG | 0.511228 | 5.4:-73960304 | None:intergenic |
| TTAGCAACCGGAGGCAAAGA+TGG | 0.511894 | 5.4:-73964258 | None:intergenic |
| TTTGTTATGGACAGTAACTC+AGG | 0.514192 | 5.4:+73959661 | MS.gene020669:intron |
| GTACAGAGCTATTAGTGGAT+TGG | 0.514412 | 5.4:-73963253 | None:intergenic |
| TACCACTTCATCTTTAGTCA+AGG | 0.517506 | 5.4:-73964232 | None:intergenic |
| GGTAGAGCCATCTTTGCCTC+CGG | 0.517563 | 5.4:+73964251 | MS.gene020669:CDS |
| TACCTCCAATTCATTGATAA+CGG | 0.520729 | 5.4:+73960302 | MS.gene020669:CDS |
| CCAGCTGTTAGCCCTGCTGC+CGG | 0.521576 | 5.4:+73964288 | MS.gene020669:CDS |
| TATATCCTCAGCAGCAGCAT+TGG | 0.525009 | 5.4:-73963345 | None:intergenic |
| TATGCTAAGTTGGTACAAGC+TGG | 0.526959 | 5.4:-73961571 | None:intergenic |
| CTCAAACTAAGAGATCTGTA+TGG | 0.533713 | 5.4:+73958708 | MS.gene020669:CDS |
| ACAGGCCATATGTATCCCTT+GGG | 0.536205 | 5.4:-73960143 | None:intergenic |
| TCCCTTGACTAAAGATGAAG+TGG | 0.540141 | 5.4:+73964230 | MS.gene020669:CDS |
| AGATAAAGACTAGCATCTAC+AGG | 0.544336 | 5.4:-73960161 | None:intergenic |
| TCACACCATAGAGCGGCATT+GGG | 0.546062 | 5.4:-73959301 | None:intergenic |
| CTGTTCAATTGTCAAAGGAC+GGG | 0.548143 | 5.4:+73961635 | MS.gene020669:CDS |
| AAGAAACAGAGAGAGTGAAA+CGG | 0.548275 | 5.4:-73958666 | None:intergenic |
| AAATGTCAGTAGAGTTTGAA+AGG | 0.549442 | 5.4:-73959372 | None:intergenic |
| ACCACTTCATCTTTAGTCAA+GGG | 0.551508 | 5.4:-73964231 | None:intergenic |
| GCAGATTGCTTTGCTCACAT+AGG | 0.553113 | 5.4:+73961340 | MS.gene020669:intron |
| ATCTCAAAGTATGGAGCAAG+TGG | 0.553378 | 5.4:+73961541 | MS.gene020669:CDS |
| CTTCTCAGAAAACCAGCCTC+AGG | 0.554552 | 5.4:-73959972 | None:intergenic |
| CCACAAACCTGGTGTTTGTG+GGG | 0.555126 | 5.4:-73959762 | None:intergenic |
| TGAATGTTCAACCACAAACC+TGG | 0.555219 | 5.4:-73959773 | None:intergenic |
| GGGACTTGGTTCCGGCAGCA+GGG | 0.563994 | 5.4:-73964299 | None:intergenic |
| GAGAGCCTATCCAGTGTCAC+TGG | 0.565093 | 5.4:+73959478 | MS.gene020669:CDS |
| GAGATCAACTCGTTTATTCA+GGG | 0.565693 | 5.4:+73963551 | MS.gene020669:CDS |
| CTGCCCTGTTCAATTGTCAA+AGG | 0.566143 | 5.4:+73961630 | MS.gene020669:CDS |
| GCCGGAACCAAGTCCCCACC+CGG | 0.567617 | 5.4:+73964306 | MS.gene020669:CDS |
| AGTGAAACGGAGAGAGCGCG+TGG | 0.568312 | 5.4:-73958653 | None:intergenic |
| TGGTTGAACAGGTTGCATGT+AGG | 0.568699 | 5.4:-73964148 | None:intergenic |
| ATCCAAAAGCTAAGAACGAT+GGG | 0.569878 | 5.4:+73962211 | MS.gene020669:CDS |
| ACTTACCAGTGACACTGGAT+AGG | 0.573824 | 5.4:-73959483 | None:intergenic |
| GTTAAACTTACCAGTGACAC+TGG | 0.574347 | 5.4:-73959488 | None:intergenic |
| CCTGAGATCAAATCTGGCCG+TGG | 0.575011 | 5.4:+73961742 | MS.gene020669:CDS |
| TCTGGAATTCTTGTTCCCAA+GGG | 0.575619 | 5.4:+73960128 | MS.gene020669:CDS |
| GGGAGTGGAGCCATAGCTGG+AGG | 0.575933 | 5.4:-73964207 | None:intergenic |
| CCTGTTCAATTGTCAAAGGA+CGG | 0.576981 | 5.4:+73961634 | MS.gene020669:CDS |
| GGCAACAATGCTACAAGAAG+AGG | 0.577262 | 5.4:+73961361 | MS.gene020669:CDS |
| AGGCGTCTTGATCATTGTTG+AGG | 0.579463 | 5.4:+73962290 | MS.gene020669:CDS |
| CACGGCCAGATTTGATCTCA+GGG | 0.585180 | 5.4:-73961741 | None:intergenic |
| CCACCACTGGTCATCTCACA+TGG | 0.586798 | 5.4:+73959211 | MS.gene020669:CDS |
| GTTAATGGTGTACCCACAAG+TGG | 0.588215 | 5.4:+73959430 | MS.gene020669:CDS |
| TATAACAAGGCCATACAAGA+TGG | 0.590025 | 5.4:+73961592 | MS.gene020669:CDS |
| TCTGTATGGAACACACTCAC+AGG | 0.590984 | 5.4:+73958722 | MS.gene020669:CDS |
| TTACGCTGTGCGTTTCCGGG+TGG | 0.594660 | 5.4:-73964321 | None:intergenic |
| TGCTACCAATGCTGCTGCTG+AGG | 0.595624 | 5.4:+73963340 | MS.gene020669:CDS |
| TACATGCAACCTGTTCAACC+AGG | 0.595870 | 5.4:+73964150 | MS.gene020669:CDS |
| TTGTTATGGACAGTAACTCA+GGG | 0.596068 | 5.4:+73959662 | MS.gene020669:intron |
| CAAGGCCATACAAGATGGTG+TGG | 0.598251 | 5.4:+73961597 | MS.gene020669:CDS |
| CTTCATCTTTAGTCAAGGGA+GGG | 0.599472 | 5.4:-73964227 | None:intergenic |
| ATCAGTCAGCACACCATCAA+CGG | 0.599870 | 5.4:-73960333 | None:intergenic |
| GGAAACAAATGCCTAAACTT+GGG | 0.602318 | 5.4:+73964111 | MS.gene020669:intron |
| GGTCTCAGACGCGCATAAAG+CGG | 0.603491 | 5.4:+73960202 | MS.gene020669:CDS |
| AAAGCAGGTTATGATAAACC+AGG | 0.604916 | 5.4:+73963212 | MS.gene020669:CDS |
| ATTGGGTGTGCTGGTTTGTG+CGG | 0.608455 | 5.4:-73959284 | None:intergenic |
| TTAGTGGCCCCACAAACACC+AGG | 0.609710 | 5.4:+73959755 | MS.gene020669:CDS |
| AATTGGAGGTATTCAGCAAG+AGG | 0.612012 | 5.4:-73960290 | None:intergenic |
| ACTTCATCTTTAGTCAAGGG+AGG | 0.615576 | 5.4:-73964228 | None:intergenic |
| CAGTTATATTTCATCACCTG+AGG | 0.615753 | 5.4:+73959956 | MS.gene020669:CDS |
| GCCTATCTTGCAGAAAAGCA+GGG | 0.620294 | 5.4:+73963152 | MS.gene020669:CDS |
| AATCCAAAAGCTAAGAACGA+TGG | 0.625091 | 5.4:+73962210 | MS.gene020669:CDS |
| CGTCCTTTGACAATTGAACA+GGG | 0.625425 | 5.4:-73961633 | None:intergenic |
| TAACTCAGGGAGTATACAGT+AGG | 0.632133 | 5.4:+73959675 | MS.gene020669:CDS |
| TCTGAGACCAAAGAGGTATG+TGG | 0.634462 | 5.4:-73960188 | None:intergenic |
| TTTCTTCTCAGATTCAACTG+TGG | 0.657126 | 5.4:+73963529 | MS.gene020669:CDS |
| AAATTATTGCCATCAAGAAG+GGG | 0.658327 | 5.4:-73959701 | None:intergenic |
| TTGAAAGGTTGAGATCTGGA+AGG | 0.659984 | 5.4:-73959357 | None:intergenic |
| TAAAGCATTAATGACAACAT+CGG | 0.664246 | 5.4:-73963186 | None:intergenic |
| TACCAGATTGACGAGAGTGT+CGG | 0.667983 | 5.4:+73963314 | MS.gene020669:CDS |
| AGTTGAATGAAAATATGCCA+CGG | 0.668031 | 5.4:-73961759 | None:intergenic |
| TAATTTGAGTACGTCATCGA+CGG | 0.669275 | 5.4:-73959735 | None:intergenic |
| GAAGCTAGTTTGAGCAACTG+TGG | 0.669967 | 5.4:-73961698 | None:intergenic |
| AACCACCCAAACAAACATTG+TGG | 0.671201 | 5.4:+73963433 | MS.gene020669:CDS |
| AAGCAGGTTATGATAAACCA+GGG | 0.675378 | 5.4:+73963213 | MS.gene020669:CDS |
| TCTCAGACGCGCATAAAGCG+GGG | 0.675654 | 5.4:+73960204 | MS.gene020669:CDS |
| CCACTGGTCATCTCACATGG+TGG | 0.682552 | 5.4:+73959214 | MS.gene020669:CDS |
| ATGCGCGTCTGAGACCAAAG+AGG | 0.682558 | 5.4:-73960195 | None:intergenic |
| TTGCACATCACACCATAGAG+CGG | 0.694628 | 5.4:-73959308 | None:intergenic |
| CCATGTGAGATGACCAGTGG+TGG | 0.695620 | 5.4:-73959211 | None:intergenic |
| TGAACAGGTTGCATGTAGGG+AGG | 0.700757 | 5.4:-73964144 | None:intergenic |
| TACCAACTTAGCATATAACA+AGG | 0.705932 | 5.4:+73961579 | MS.gene020669:CDS |
| ATGTTTCTACGAAAACTGAG+AGG | 0.710248 | 5.4:-73963475 | None:intergenic |
| CCACCATGTGAGATGACCAG+TGG | 0.782734 | 5.4:-73959214 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAACTATGAATTATT+TGG | + | chr5.4:73959408-73959427 | MS.gene020669:CDS | 10.0% |
| !!! | AAATAATTCATAGTTTTATT+TGG | - | chr5.4:73959409-73959428 | None:intergenic | 10.0% |
| !!! | AATAATTCATAGTTTTATTT+GGG | - | chr5.4:73959408-73959427 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTTTGAAGA+AGG | - | chr5.4:73963972-73963991 | None:intergenic | 10.0% |
| !! | AAGTAAAACAAAGTTAATTA+AGG | - | chr5.4:73964007-73964026 | None:intergenic | 15.0% |
| !! | ATGATAATTTCTTATATGAA+AGG | - | chr5.4:73961053-73961072 | None:intergenic | 15.0% |
| !! | ATTATTAAATGATGAAGAAA+TGG | - | chr5.4:73963933-73963952 | None:intergenic | 15.0% |
| !! | ATTCAATGAATATATTGATA+TGG | - | chr5.4:73960690-73960709 | None:intergenic | 15.0% |
| !! | TAAGAATTTATCAATTGAAT+TGG | + | chr5.4:73960723-73960742 | MS.gene020669:intron | 15.0% |
| !! | TACTCAAATAATTAAAATGT+TGG | - | chr5.4:73960528-73960547 | None:intergenic | 15.0% |
| !! | TATAAGATTATGTTAGTAAT+AGG | + | chr5.4:73962383-73962402 | MS.gene020669:intron | 15.0% |
| !! | TGATAATTTCTTATATGAAA+GGG | - | chr5.4:73961052-73961071 | None:intergenic | 15.0% |
| !!! | AAATTAGTTTCTTTATCTTA+AGG | + | chr5.4:73959091-73959110 | MS.gene020669:intron | 15.0% |
| !!! | ACATTTTAATTATTTGAGTA+AGG | + | chr5.4:73960528-73960547 | MS.gene020669:intron | 15.0% |
| !!! | TTGCTGTTATATATTTTAAA+TGG | + | chr5.4:73960628-73960647 | MS.gene020669:intron | 15.0% |
| !! | AAAAAGAAGAAAAATAGTGT+GGG | + | chr5.4:73963753-73963772 | MS.gene020669:intron | 20.0% |
| !! | AAAAGTAAAAAAGCAATGAT+TGG | - | chr5.4:73960596-73960615 | None:intergenic | 20.0% |
| !! | AACAAAGTTAATTAAGGAAA+TGG | - | chr5.4:73964001-73964020 | None:intergenic | 20.0% |
| !! | AAGCATACATATATATTCTA+AGG | - | chr5.4:73961263-73961282 | None:intergenic | 20.0% |
| !! | ACTATGAATTATTTGGTTAA+TGG | + | chr5.4:73959415-73959434 | MS.gene020669:CDS | 20.0% |
| !! | GAATTATATACAGGAATAAT+AGG | - | chr5.4:73962330-73962349 | None:intergenic | 20.0% |
| !! | TAAATGATACATAATCAAGT+TGG | + | chr5.4:73960751-73960770 | MS.gene020669:intron | 20.0% |
| !! | TACAATCATTGTTCAATAAT+AGG | + | chr5.4:73960853-73960872 | MS.gene020669:intron | 20.0% |
| !! | TCAACCAAAAAAAAACAAAT+TGG | + | chr5.4:73962998-73963017 | MS.gene020669:intron | 20.0% |
| !! | TGAGTAGGATATAATAAAAA+TGG | + | chr5.4:73962889-73962908 | MS.gene020669:intron | 20.0% |
| !! | TGATAGAATGAATTATATAC+AGG | - | chr5.4:73962339-73962358 | None:intergenic | 20.0% |
| !!! | AAAACAAATTGGTTTCTATT+TGG | + | chr5.4:73963009-73963028 | MS.gene020669:intron | 20.0% |
| !!! | AAACAAATTGGTTTCTATTT+GGG | + | chr5.4:73963010-73963029 | MS.gene020669:intron | 20.0% |
| !!! | ATTTGAAACAAAAAGTTTGT+AGG | - | chr5.4:73963071-73963090 | None:intergenic | 20.0% |
| !!! | GAAACCAATTTGTTTTTTTT+TGG | - | chr5.4:73963005-73963024 | None:intergenic | 20.0% |
| !!! | GATATTTAGTTTTGTTGTTA+TGG | + | chr5.4:73959519-73959538 | MS.gene020669:intron | 20.0% |
| !!! | GTGAGTTTTCAAATTTATTA+TGG | + | chr5.4:73959625-73959644 | MS.gene020669:intron | 20.0% |
| !!! | TCAATTGATTTTAAGCAAAA+TGG | - | chr5.4:73961664-73961683 | None:intergenic | 20.0% |
| !!! | TCTTTATCTTAAGGTTTTTA+AGG | + | chr5.4:73959100-73959119 | MS.gene020669:intron | 20.0% |
| !!! | TTTCTGAAATCTTTTTGTTA+TGG | + | chr5.4:73959648-73959667 | MS.gene020669:intron | 20.0% |
| !!! | TTTTTTTTTGAAGAAGGAAA+TGG | - | chr5.4:73963966-73963985 | None:intergenic | 20.0% |
| ! | AAAATTATTGCCATCAAGAA+GGG | - | chr5.4:73959705-73959724 | None:intergenic | 25.0% |
| ! | AAATAACTAACCTATTGCTT+CGG | - | chr5.4:73960375-73960394 | None:intergenic | 25.0% |
| ! | AATCAGATTCATTCTATTTG+CGG | - | chr5.4:73960429-73960448 | None:intergenic | 25.0% |
| ! | AATTATACTGTACCATTGAT+AGG | + | chr5.4:73963643-73963662 | MS.gene020669:intron | 25.0% |
| ! | AGTGCAAATTTAATGGTTTA+GGG | + | chr5.4:73962725-73962744 | MS.gene020669:intron | 25.0% |
| ! | ATAGGATAATCAAAGATTCA+TGG | + | chr5.4:73962010-73962029 | MS.gene020669:intron | 25.0% |
| ! | ATGATCCAGAAAATAAGAAT+AGG | + | chr5.4:73962819-73962838 | MS.gene020669:intron | 25.0% |
| ! | ATGCATCAAAAGAATCTATT+AGG | - | chr5.4:73958963-73958982 | None:intergenic | 25.0% |
| ! | ATTGATATGGAGAAATTTGT+AGG | - | chr5.4:73960677-73960696 | None:intergenic | 25.0% |
| ! | CTAGAAATTATTGATCAACA+AGG | - | chr5.4:73961421-73961440 | None:intergenic | 25.0% |
| ! | GAAAAAGAAGAAAAATAGTG+TGG | + | chr5.4:73963752-73963771 | MS.gene020669:intron | 25.0% |
| ! | GCATTAAAAAATTGTGTTCT+AGG | + | chr5.4:73961961-73961980 | MS.gene020669:intron | 25.0% |
| ! | TAAAATTATTGCCATCAAGA+AGG | - | chr5.4:73959706-73959725 | None:intergenic | 25.0% |
| ! | TAGGATAATCAAAGATTCAT+GGG | + | chr5.4:73962011-73962030 | MS.gene020669:intron | 25.0% |
| ! | TAGTGCAAATTTAATGGTTT+AGG | + | chr5.4:73962724-73962743 | MS.gene020669:intron | 25.0% |
| ! | TCAGATTAGTGCAAATTTAA+TGG | + | chr5.4:73962718-73962737 | MS.gene020669:intron | 25.0% |
| ! | TCTGAATAATATTTAACTGC+TGG | - | chr5.4:73961846-73961865 | None:intergenic | 25.0% |
| ! | TCTTTAGTCTCTATTTAAGA+AGG | + | chr5.4:73961294-73961313 | MS.gene020669:intron | 25.0% |
| ! | TTAACTTTACAATCTTGGTA+AGG | + | chr5.4:73960791-73960810 | MS.gene020669:intron | 25.0% |
| ! | TTATTCACTAAGAACATGAT+TGG | + | chr5.4:73960460-73960479 | MS.gene020669:intron | 25.0% |
| ! | TTGATATGGAGAAATTTGTA+GGG | - | chr5.4:73960676-73960695 | None:intergenic | 25.0% |
| ! | TTGATTATGTATCATTTAGC+AGG | - | chr5.4:73960749-73960768 | None:intergenic | 25.0% |
| ! | TTGTTAAACTTGATATGGTT+AGG | + | chr5.4:73963859-73963878 | MS.gene020669:intron | 25.0% |
| !! | ACAATGATTGTATAGTTTGT+AGG | - | chr5.4:73960845-73960864 | None:intergenic | 25.0% |
| !! | AGTTAGTTTAAGAACAAACA+AGG | - | chr5.4:73959838-73959857 | None:intergenic | 25.0% |
| !! | ATAGAACTTTCTTTGACTTA+CGG | - | chr5.4:73961813-73961832 | None:intergenic | 25.0% |
| !! | ATTAATGCTTTAAGTAAAGC+AGG | + | chr5.4:73963197-73963216 | MS.gene020669:CDS | 25.0% |
| !! | CTAGTTTAACTTTACAATCT+TGG | + | chr5.4:73960786-73960805 | MS.gene020669:intron | 25.0% |
| !! | TAAAGCATTAATGACAACAT+CGG | - | chr5.4:73963189-73963208 | None:intergenic | 25.0% |
| !!! | AACAATGTGTATTTTGAGAA+AGG | - | chr5.4:73962186-73962205 | None:intergenic | 25.0% |
| !!! | ACAATGTGTATTTTGAGAAA+GGG | - | chr5.4:73962185-73962204 | None:intergenic | 25.0% |
| !!! | CCAGTTTAACTTTATCTTTT+GGG | + | chr5.4:73959129-73959148 | MS.gene020669:intron | 25.0% |
| !!! | TATCTCCTATTCTTATTTTC+TGG | - | chr5.4:73962827-73962846 | None:intergenic | 25.0% |
| !!! | TCCAGTTTAACTTTATCTTT+TGG | + | chr5.4:73959128-73959147 | MS.gene020669:intron | 25.0% |
| !!! | TGAGTTTGTTAAACTTGATA+TGG | + | chr5.4:73963854-73963873 | MS.gene020669:intron | 25.0% |
| !!! | TGGATTGGATATAAACTTTT+TGG | - | chr5.4:73963241-73963260 | None:intergenic | 25.0% |
| AAAAATCAGACTTCTCTATC+AGG | + | chr5.4:73962270-73962289 | MS.gene020669:CDS | 30.0% | |
| AAACAACGAAACTTGTCTTT+AGG | + | chr5.4:73960018-73960037 | MS.gene020669:CDS | 30.0% | |
| AAATGTCAGTAGAGTTTGAA+AGG | - | chr5.4:73959375-73959394 | None:intergenic | 30.0% | |
| AAATTATTGCCATCAAGAAG+GGG | - | chr5.4:73959704-73959723 | None:intergenic | 30.0% | |
| AATTACTACACACAAGTAAC+AGG | - | chr5.4:73962470-73962489 | None:intergenic | 30.0% | |
| AATTAGACTTAGAAGAGTCT+GGG | - | chr5.4:73961893-73961912 | None:intergenic | 30.0% | |
| AATTGACGAAAGATGCATTT+GGG | + | chr5.4:73959329-73959348 | MS.gene020669:CDS | 30.0% | |
| ACCATTGATAGGAGTTTAAT+TGG | + | chr5.4:73963654-73963673 | MS.gene020669:intron | 30.0% | |
| ACCTTGATTATCTCAAAGTA+TGG | + | chr5.4:73961532-73961551 | MS.gene020669:CDS | 30.0% | |
| AGCTTAGAACTTCACTTTAT+AGG | + | chr5.4:73961992-73962011 | MS.gene020669:intron | 30.0% | |
| AGTTGAATGAAAATATGCCA+CGG | - | chr5.4:73961762-73961781 | None:intergenic | 30.0% | |
| ATAATCAGTCATACCAACTA+TGG | - | chr5.4:73962760-73962779 | None:intergenic | 30.0% | |
| ATACTAGAACAGAAATTCAC+AGG | - | chr5.4:73962948-73962967 | None:intergenic | 30.0% | |
| ATTCAGGGTGCAAAAATTAA+CGG | + | chr5.4:73963566-73963585 | MS.gene020669:CDS | 30.0% | |
| ATTGGATGGAAAAGTTTCAA+TGG | + | chr5.4:73960478-73960497 | MS.gene020669:intron | 30.0% | |
| CCATTGATAGGAGTTTAATT+GGG | + | chr5.4:73963655-73963674 | MS.gene020669:intron | 30.0% | |
| CCCAAAAGATAAAGTTAAAC+TGG | - | chr5.4:73959132-73959151 | None:intergenic | 30.0% | |
| CGAATTTCTTGGGATTATAT+TGG | + | chr5.4:73962656-73962675 | MS.gene020669:intron | 30.0% | |
| GCATTATAAATAAGTTGCAG+AGG | + | chr5.4:73962545-73962564 | MS.gene020669:intron | 30.0% | |
| GGGAAGAATCATAAATTTGT+AGG | + | chr5.4:73959149-73959168 | MS.gene020669:intron | 30.0% | |
| GTATGTTTAGAGGATGTAAA+AGG | - | chr5.4:73961182-73961201 | None:intergenic | 30.0% | |
| TAAGTTGCAGAGGAAAATAA+AGG | + | chr5.4:73962555-73962574 | MS.gene020669:intron | 30.0% | |
| TACCAACTTAGCATATAACA+AGG | + | chr5.4:73961579-73961598 | MS.gene020669:CDS | 30.0% | |
| TACCTCCAATTCATTGATAA+CGG | + | chr5.4:73960302-73960321 | MS.gene020669:CDS | 30.0% | |
| TCAAAAGAATCTATTAGGAC+AGG | - | chr5.4:73958958-73958977 | None:intergenic | 30.0% | |
| TCTCAAAATACACATTGTTC+AGG | + | chr5.4:73962187-73962206 | MS.gene020669:CDS | 30.0% | |
| TGACAGTATGGATAGTTAAT+AGG | - | chr5.4:73961137-73961156 | None:intergenic | 30.0% | |
| TGATATGGAGAAATTTGTAG+GGG | - | chr5.4:73960675-73960694 | None:intergenic | 30.0% | |
| TGATGAAGAAAATGACAGTA+TGG | - | chr5.4:73961149-73961168 | None:intergenic | 30.0% | |
| TTGGATGGAAAAGTTTCAAT+GGG | + | chr5.4:73960479-73960498 | MS.gene020669:intron | 30.0% | |
| ! | AGTATCTATGAGCAGTTTTA+GGG | - | chr5.4:73963607-73963626 | None:intergenic | 30.0% |
| ! | ATTGTTCTCTATTCTTTTGC+AGG | + | chr5.4:73964090-73964109 | MS.gene020669:intron | 30.0% |
| ! | CAAAAGCGAAATGTTTTCAA+TGG | - | chr5.4:73962044-73962063 | None:intergenic | 30.0% |
| ! | CATTGAAAACATTTCGCTTT+TGG | + | chr5.4:73962042-73962061 | MS.gene020669:intron | 30.0% |
| ! | CTTTTCCACAATGTTTGTTT+GGG | - | chr5.4:73963441-73963460 | None:intergenic | 30.0% |
| ! | GTTATGGATTCAGTATTTTG+TGG | + | chr5.4:73959535-73959554 | MS.gene020669:intron | 30.0% |
| ! | TAGAACTTTCTTTGACTTAC+GGG | - | chr5.4:73961812-73961831 | None:intergenic | 30.0% |
| ! | TATTTTCATTCAACTTGACG+TGG | + | chr5.4:73961767-73961786 | MS.gene020669:CDS | 30.0% |
| !! | AAAAACATTTGCTAGTTCTG+TGG | + | chr5.4:73963367-73963386 | MS.gene020669:CDS | 30.0% |
| !! | AAGACAAGTTTCGTTGTTTT+TGG | - | chr5.4:73960017-73960036 | None:intergenic | 30.0% |
| !! | CAATGTGTATTTTGAGAAAG+GGG | - | chr5.4:73962184-73962203 | None:intergenic | 30.0% |
| !! | CTTTTCTATGTTTAGCTTAC+TGG | + | chr5.4:73959603-73959622 | MS.gene020669:intron | 30.0% |
| !! | TCCATACTTTGAGATAATCA+AGG | - | chr5.4:73961536-73961555 | None:intergenic | 30.0% |
| !! | TCTATCTGATTCTGAGATTA+TGG | - | chr5.4:73961934-73961953 | None:intergenic | 30.0% |
| !! | TTTCACCTTGTTACTTTGAA+AGG | + | chr5.4:73962784-73962803 | MS.gene020669:intron | 30.0% |
| !!! | AGACAAGTTTCGTTGTTTTT+GGG | - | chr5.4:73960016-73960035 | None:intergenic | 30.0% |
| !!! | AGTTTTATTTGGGAAAACAC+CGG | - | chr5.4:73959398-73959417 | None:intergenic | 30.0% |
| !!! | GTTAAACAACTTTGTTTTGC+AGG | + | chr5.4:73959184-73959203 | MS.gene020669:intron | 30.0% |
| AAAGCAGGTTATGATAAACC+AGG | + | chr5.4:73963212-73963231 | MS.gene020669:CDS | 35.0% | |
| AAGAAACAGAGAGAGTGAAA+CGG | - | chr5.4:73958669-73958688 | None:intergenic | 35.0% | |
| AAGCAGGTTATGATAAACCA+GGG | + | chr5.4:73963213-73963232 | MS.gene020669:CDS | 35.0% | |
| AATAGGCATGAAAAACCAAG+AGG | - | chr5.4:73961120-73961139 | None:intergenic | 35.0% | |
| AATCCAAAAGCTAAGAACGA+TGG | + | chr5.4:73962210-73962229 | MS.gene020669:CDS | 35.0% | |
| ACAGAAAAATAGCCACTTGT+GGG | - | chr5.4:73959445-73959464 | None:intergenic | 35.0% | |
| ACCACTTCATCTTTAGTCAA+GGG | - | chr5.4:73964234-73964253 | None:intergenic | 35.0% | |
| ACTTTACAATCTTGGTAAGG+AGG | + | chr5.4:73960794-73960813 | MS.gene020669:intron | 35.0% | |
| AGAGGACGGAAATCTTTATA+AGG | - | chr5.4:73961102-73961121 | None:intergenic | 35.0% | |
| AGATAAAGACTAGCATCTAC+AGG | - | chr5.4:73960164-73960183 | None:intergenic | 35.0% | |
| AGGAAACAAATGCCTAAACT+TGG | + | chr5.4:73964110-73964129 | MS.gene020669:intron | 35.0% | |
| AGGAGAGTAAATCATGAAAG+TGG | - | chr5.4:73959818-73959837 | None:intergenic | 35.0% | |
| AGTAGATTCTCCCAACAAAA+AGG | + | chr5.4:73963804-73963823 | MS.gene020669:intron | 35.0% | |
| ATCCAAAAGCTAAGAACGAT+GGG | + | chr5.4:73962211-73962230 | MS.gene020669:CDS | 35.0% | |
| ATCCTCTAAACATACGACAA+AGG | + | chr5.4:73961187-73961206 | MS.gene020669:intron | 35.0% | |
| ATGACTGAAAAAAGACTTCC+TGG | - | chr5.4:73964171-73964190 | None:intergenic | 35.0% | |
| ATGGAAAAGTTTCAATGGGA+AGG | + | chr5.4:73960483-73960502 | MS.gene020669:intron | 35.0% | |
| ATTCTATAACTTCTGCCCTT+AGG | - | chr5.4:73962412-73962431 | None:intergenic | 35.0% | |
| ATTGGGATAAAGGATAGGTA+GGG | + | chr5.4:73962587-73962606 | MS.gene020669:intron | 35.0% | |
| ATTTCTTGTCCTAATGCTGA+TGG | + | chr5.4:73960906-73960925 | MS.gene020669:intron | 35.0% | |
| CAATGAACCATAAGTCTGAT+TGG | - | chr5.4:73960075-73960094 | None:intergenic | 35.0% | |
| CAATTAGACTTAGAAGAGTC+TGG | - | chr5.4:73961894-73961913 | None:intergenic | 35.0% | |
| CAATTGACGAAAGATGCATT+TGG | + | chr5.4:73959328-73959347 | MS.gene020669:CDS | 35.0% | |
| CAGTTATATTTCATCACCTG+AGG | + | chr5.4:73959956-73959975 | MS.gene020669:CDS | 35.0% | |
| CATACCAACTATGGAGTAAA+TGG | - | chr5.4:73962751-73962770 | None:intergenic | 35.0% | |
| CCCAATTAAACTCCTATCAA+TGG | - | chr5.4:73963658-73963677 | None:intergenic | 35.0% | |
| CTCAAACTAAGAGATCTGTA+TGG | + | chr5.4:73958708-73958727 | MS.gene020669:CDS | 35.0% | |
| GAGATCAACTCGTTTATTCA+GGG | + | chr5.4:73963551-73963570 | MS.gene020669:CDS | 35.0% | |
| GGAAACAAATGCCTAAACTT+GGG | + | chr5.4:73964111-73964130 | MS.gene020669:intron | 35.0% | |
| GTTAGTAATAGGACTCCTAA+GGG | + | chr5.4:73962394-73962413 | MS.gene020669:intron | 35.0% | |
| GTTCAATAATAGGACACTGA+TGG | + | chr5.4:73960863-73960882 | MS.gene020669:intron | 35.0% | |
| TAATTGCTGTCTGCAGTAAT+TGG | + | chr5.4:73962485-73962504 | MS.gene020669:intron | 35.0% | |
| TAATTTGAGTACGTCATCGA+CGG | - | chr5.4:73959738-73959757 | None:intergenic | 35.0% | |
| TACCACTTCATCTTTAGTCA+AGG | - | chr5.4:73964235-73964254 | None:intergenic | 35.0% | |
| TATAAAGATTTCCGTCCTCT+TGG | + | chr5.4:73961102-73961121 | MS.gene020669:intron | 35.0% | |
| TATAACAAGGCCATACAAGA+TGG | + | chr5.4:73961592-73961611 | MS.gene020669:CDS | 35.0% | |
| TATTGAGCTGAACTGAATCA+TGG | + | chr5.4:73958866-73958885 | MS.gene020669:intron | 35.0% | |
| TCAAACTCTACTGACATTTC+CGG | + | chr5.4:73959376-73959395 | MS.gene020669:CDS | 35.0% | |
| TCACTAAGAACATGATTGGA+TGG | + | chr5.4:73960464-73960483 | MS.gene020669:intron | 35.0% | |
| TCAGACTTTCCATATTTGCA+TGG | + | chr5.4:73961861-73961880 | MS.gene020669:intron | 35.0% | |
| TCAGCATTAGGACAAGAAAT+CGG | - | chr5.4:73960906-73960925 | None:intergenic | 35.0% | |
| TCAGTATTTCCTAAGAATGC+AGG | + | chr5.4:73963404-73963423 | MS.gene020669:CDS | 35.0% | |
| TCTCAAATTGACAACATCAC+TGG | - | chr5.4:73959016-73959035 | None:intergenic | 35.0% | |
| TGGTTGAACATTCAGGTAAA+TGG | + | chr5.4:73959782-73959801 | MS.gene020669:intron | 35.0% | |
| TGTTAGTAATAGGACTCCTA+AGG | + | chr5.4:73962393-73962412 | MS.gene020669:intron | 35.0% | |
| TTAGGACAAGAAATCGGATA+AGG | - | chr5.4:73960900-73960919 | None:intergenic | 35.0% | |
| TTCAGGGTGCAAAAATTAAC+GGG | + | chr5.4:73963567-73963586 | MS.gene020669:CDS | 35.0% | |
| TTGACGTGGAACGATATAAA+AGG | + | chr5.4:73961781-73961800 | MS.gene020669:CDS | 35.0% | |
| TTGAGAGATAACAGACTTGA+TGG | - | chr5.4:73964056-73964075 | None:intergenic | 35.0% | |
| TTGTTATGGACAGTAACTCA+GGG | + | chr5.4:73959662-73959681 | MS.gene020669:intron | 35.0% | |
| TTTATCAAGACGTTTGCTTC+TGG | + | chr5.4:73960110-73960129 | MS.gene020669:CDS | 35.0% | |
| TTTCTTCTCAGATTCAACTG+TGG | + | chr5.4:73963529-73963548 | MS.gene020669:CDS | 35.0% | |
| ! | AGTTGGTATGACTGATTATC+TGG | + | chr5.4:73962761-73962780 | MS.gene020669:intron | 35.0% |
| ! | ATGTTTCTACGAAAACTGAG+AGG | - | chr5.4:73963478-73963497 | None:intergenic | 35.0% |
| ! | ATTGGTTTCTATTTGGGCAT+TGG | + | chr5.4:73963016-73963035 | MS.gene020669:intron | 35.0% |
| ! | GAGTATCTATGAGCAGTTTT+AGG | - | chr5.4:73963608-73963627 | None:intergenic | 35.0% |
| ! | GCACGATTTTCATCATTTTG+TGG | + | chr5.4:73961451-73961470 | MS.gene020669:intron | 35.0% |
| ! | GCTTTTCCACAATGTTTGTT+TGG | - | chr5.4:73963442-73963461 | None:intergenic | 35.0% |
| ! | GTGTGTTATTACCCAAGTTT+AGG | - | chr5.4:73964125-73964144 | None:intergenic | 35.0% |
| ! | TAGTGACTCTGCTTACATTT+TGG | + | chr5.4:73959261-73959280 | MS.gene020669:CDS | 35.0% |
| ! | TGTCTTTAGGTTTCTCAATC+AGG | + | chr5.4:73960031-73960050 | MS.gene020669:CDS | 35.0% |
| ! | TTTGTTATGGACAGTAACTC+AGG | + | chr5.4:73959661-73959680 | MS.gene020669:intron | 35.0% |
| ! | TTTTGCTTCCATCTTAGACT+AGG | + | chr5.4:73960990-73961009 | MS.gene020669:intron | 35.0% |
| !! | AGAGGAAAATAAAGGCATTC+GGG | + | chr5.4:73962563-73962582 | MS.gene020669:intron | 35.0% |
| !! | CAGAGGAAAATAAAGGCATT+CGG | + | chr5.4:73962562-73962581 | MS.gene020669:intron | 35.0% |
| !! | CTGGTAAGTTTAACTTGTGT+CGG | + | chr5.4:73959497-73959516 | MS.gene020669:intron | 35.0% |
| !! | CTTATTTTCTGGATCATGCA+GGG | - | chr5.4:73962816-73962835 | None:intergenic | 35.0% |
| !!! | ATATAAACTTTTTGGCTCCC+TGG | - | chr5.4:73963233-73963252 | None:intergenic | 35.0% |
| !!! | TCTTATTTTCTGGATCATGC+AGG | - | chr5.4:73962817-73962836 | None:intergenic | 35.0% |
| !!! | TTTTTTCACTGAGGAGCTTT+TGG | + | chr5.4:73963889-73963908 | MS.gene020669:intron | 35.0% |
| AAAAGACTTCCTGGTTGAAC+AGG | - | chr5.4:73964162-73964181 | None:intergenic | 40.0% | |
| AAAATGAGAAGCCCAAAGTG+TGG | + | chr5.4:73963715-73963734 | MS.gene020669:intron | 40.0% | |
| AACATCCACACCATCTTGTA+TGG | - | chr5.4:73961605-73961624 | None:intergenic | 40.0% | |
| AACCACCCAAACAAACATTG+TGG | + | chr5.4:73963433-73963452 | MS.gene020669:CDS | 40.0% | |
| AACTAACCTATTGCTTCGGA+TGG | - | chr5.4:73960371-73960390 | None:intergenic | 40.0% | |
| AAGTGTGGAGAGTTTACACT+AGG | + | chr5.4:73963730-73963749 | MS.gene020669:intron | 40.0% | |
| AATTGGGCCTGATACTATTG+AGG | + | chr5.4:73963671-73963690 | MS.gene020669:intron | 40.0% | |
| ACATCACCCTCAATAGTATC+AGG | - | chr5.4:73963681-73963700 | None:intergenic | 40.0% | |
| ACCAAGACTCTCGAATTTCT+TGG | + | chr5.4:73962645-73962664 | MS.gene020669:intron | 40.0% | |
| ACTCGCCGTTATCAATGAAT+TGG | - | chr5.4:73960310-73960329 | None:intergenic | 40.0% | |
| ACTTCATCTTTAGTCAAGGG+AGG | - | chr5.4:73964231-73964250 | None:intergenic | 40.0% | |
| AGGTTTGTGGTTGAACATTC+AGG | + | chr5.4:73959775-73959794 | MS.gene020669:CDS | 40.0% | |
| AGTGTAAACTCTCCACACTT+TGG | - | chr5.4:73963730-73963749 | None:intergenic | 40.0% | |
| ATCTCAAAGTATGGAGCAAG+TGG | + | chr5.4:73961541-73961560 | MS.gene020669:CDS | 40.0% | |
| ATGGAGAAATTTGTAGGGGA+TGG | - | chr5.4:73960671-73960690 | None:intergenic | 40.0% | |
| ATTGCTTCGGATGGAGTTAA+AGG | - | chr5.4:73960362-73960381 | None:intergenic | 40.0% | |
| ATTGGGCCTGATACTATTGA+GGG | + | chr5.4:73963672-73963691 | MS.gene020669:intron | 40.0% | |
| CAACAACGATGAACACTATG+CGG | - | chr5.4:73961477-73961496 | None:intergenic | 40.0% | |
| CACAGAAAAATAGCCACTTG+TGG | - | chr5.4:73959446-73959465 | None:intergenic | 40.0% | |
| CACCTTTGTCGTATGTTTAG+AGG | - | chr5.4:73961192-73961211 | None:intergenic | 40.0% | |
| CAGCAATGAGTTTGTATCTC+AGG | + | chr5.4:73963499-73963518 | MS.gene020669:CDS | 40.0% | |
| CAGTAGTACAGAGCTATTAG+TGG | - | chr5.4:73963261-73963280 | None:intergenic | 40.0% | |
| CCAAGACTCTCGAATTTCTT+GGG | + | chr5.4:73962646-73962665 | MS.gene020669:intron | 40.0% | |
| CCATCAACCAATCAGACTTA+TGG | + | chr5.4:73960065-73960084 | MS.gene020669:CDS | 40.0% | |
| CCTGTTCAATTGTCAAAGGA+CGG | + | chr5.4:73961634-73961653 | MS.gene020669:CDS | 40.0% | |
| CGATGACGTACTCAAATTAG+TGG | + | chr5.4:73959739-73959758 | MS.gene020669:CDS | 40.0% | |
| CGTCCTTTGACAATTGAACA+GGG | - | chr5.4:73961636-73961655 | None:intergenic | 40.0% | |
| CTCTGTACTACTGAAGTTCA+AGG | + | chr5.4:73963268-73963287 | MS.gene020669:CDS | 40.0% | |
| CTGTTCAATTGTCAAAGGAC+GGG | + | chr5.4:73961635-73961654 | MS.gene020669:CDS | 40.0% | |
| CTTCATCTTTAGTCAAGGGA+GGG | - | chr5.4:73964230-73964249 | None:intergenic | 40.0% | |
| GACTTTCCATATTTGCATGG+TGG | + | chr5.4:73961864-73961883 | MS.gene020669:intron | 40.0% | |
| GAGTTTGAAAGGTTGAGATC+TGG | - | chr5.4:73959364-73959383 | None:intergenic | 40.0% | |
| GATGGAAGCAAAAATGCAGA+AGG | - | chr5.4:73960983-73961002 | None:intergenic | 40.0% | |
| GATTGGGATAAAGGATAGGT+AGG | + | chr5.4:73962586-73962605 | MS.gene020669:intron | 40.0% | |
| GCGGCAAGTCATTAACAAAA+TGG | - | chr5.4:73960410-73960429 | None:intergenic | 40.0% | |
| GGAGATCAACTCGTTTATTC+AGG | + | chr5.4:73963550-73963569 | MS.gene020669:CDS | 40.0% | |
| GTGTAAACTCTCCACACTTT+GGG | - | chr5.4:73963729-73963748 | None:intergenic | 40.0% | |
| GTTAAACTTACCAGTGACAC+TGG | - | chr5.4:73959491-73959510 | None:intergenic | 40.0% | |
| GTTACAAAGCCTGCATTCTT+AGG | - | chr5.4:73963416-73963435 | None:intergenic | 40.0% | |
| TAAGCAGAGTCACTAGAATC+AGG | - | chr5.4:73959256-73959275 | None:intergenic | 40.0% | |
| TATATTTCATCACCTGAGGC+TGG | + | chr5.4:73959960-73959979 | MS.gene020669:CDS | 40.0% | |
| TCCCTTGACTAAAGATGAAG+TGG | + | chr5.4:73964230-73964249 | MS.gene020669:CDS | 40.0% | |
| TCTACAACCACATACCTCTT+TGG | + | chr5.4:73960181-73960200 | MS.gene020669:CDS | 40.0% | |
| TGAATGTTCAACCACAAACC+TGG | - | chr5.4:73959776-73959795 | None:intergenic | 40.0% | |
| TGGAGAAATTTGTAGGGGAT+GGG | - | chr5.4:73960670-73960689 | None:intergenic | 40.0% | |
| TTAACTCCATCCGAAGCAAT+AGG | + | chr5.4:73960362-73960381 | MS.gene020669:CDS | 40.0% | |
| TTCCACAATGTTTGTTTGGG+TGG | - | chr5.4:73963438-73963457 | None:intergenic | 40.0% | |
| TTGAAAGGTTGAGATCTGGA+AGG | - | chr5.4:73959360-73959379 | None:intergenic | 40.0% | |
| TTGTTACGACACTTGTGAGT+AGG | + | chr5.4:73962874-73962893 | MS.gene020669:intron | 40.0% | |
| TTGTTCCCAAGGGATACATA+TGG | + | chr5.4:73960138-73960157 | MS.gene020669:CDS | 40.0% | |
| TTTGGTTGAAGTAACTCAGC+AGG | - | chr5.4:73962987-73963006 | None:intergenic | 40.0% | |
| ! | ATCTCACATGGTGGTTTTTC+GGG | + | chr5.4:73959223-73959242 | MS.gene020669:CDS | 40.0% |
| ! | CATCTCACATGGTGGTTTTT+CGG | + | chr5.4:73959222-73959241 | MS.gene020669:CDS | 40.0% |
| ! | CCATAAGTCTGATTGGTTGA+TGG | - | chr5.4:73960068-73960087 | None:intergenic | 40.0% |
| ! | CTCTCACACACCTTTTTGTT+GGG | - | chr5.4:73963817-73963836 | None:intergenic | 40.0% |
| ! | GTACAGAGCTATTAGTGGAT+TGG | - | chr5.4:73963256-73963275 | None:intergenic | 40.0% |
| ! | TAACTCAGGGAGTATACAGT+AGG | + | chr5.4:73959675-73959694 | MS.gene020669:CDS | 40.0% |
| ! | TCTGGAATTCTTGTTCCCAA+GGG | + | chr5.4:73960128-73960147 | MS.gene020669:CDS | 40.0% |
| !! | AAATAAAGGCATTCGGGGAT+TGG | + | chr5.4:73962569-73962588 | MS.gene020669:intron | 40.0% |
| !! | AATAAAGGCATTCGGGGATT+GGG | + | chr5.4:73962570-73962589 | MS.gene020669:intron | 40.0% |
| !! | AATTGGAGGTATTCAGCAAG+AGG | - | chr5.4:73960293-73960312 | None:intergenic | 40.0% |
| !! | GAGGAAAATAAAGGCATTCG+GGG | + | chr5.4:73962564-73962583 | MS.gene020669:intron | 40.0% |
| !! | GGCCTTGTTATATGCTAAGT+TGG | - | chr5.4:73961584-73961603 | None:intergenic | 40.0% |
| !! | TATGCTAAGTTGGTACAAGC+TGG | - | chr5.4:73961574-73961593 | None:intergenic | 40.0% |
| !! | TTCTGGAATTCTTGTTCCCA+AGG | + | chr5.4:73960127-73960146 | MS.gene020669:CDS | 40.0% |
| !!! | CACAAGTGGCTATTTTTCTG+TGG | + | chr5.4:73959444-73959463 | MS.gene020669:CDS | 40.0% |
| !!! | GGCAGTAAGTTTTTTCACTG+AGG | + | chr5.4:73963880-73963899 | MS.gene020669:intron | 40.0% |
| AACCACAAACCTGGTGTTTG+TGG | - | chr5.4:73959767-73959786 | None:intergenic | 45.0% | |
| AAGCTCTCGAATTCATGGAG+GGG | + | chr5.4:73962617-73962636 | MS.gene020669:intron | 45.0% | |
| ACAGGCCATATGTATCCCTT+GGG | - | chr5.4:73960146-73960165 | None:intergenic | 45.0% | |
| ACCACAAACCTGGTGTTTGT+GGG | - | chr5.4:73959766-73959785 | None:intergenic | 45.0% | |
| ACTTACCAGTGACACTGGAT+AGG | - | chr5.4:73959486-73959505 | None:intergenic | 45.0% | |
| AGACCAAGCTCTCGAATTCA+TGG | + | chr5.4:73962612-73962631 | MS.gene020669:intron | 45.0% | |
| AGCAAAAATGCAGAAGGTCG+TGG | - | chr5.4:73960977-73960996 | None:intergenic | 45.0% | |
| AGCCTATCTTGCAGAAAAGC+AGG | + | chr5.4:73963151-73963170 | MS.gene020669:CDS | 45.0% | |
| AGCTACAAACACAGCAAGAC+TGG | - | chr5.4:73964370-73964389 | None:intergenic | 45.0% | |
| AGGCGTCTTGATCATTGTTG+AGG | + | chr5.4:73962290-73962309 | MS.gene020669:CDS | 45.0% | |
| AGGGCCATTTACTCCATAGT+TGG | + | chr5.4:73962744-73962763 | MS.gene020669:intron | 45.0% | |
| AGGTACTTGTTCTTGCCATG+CGG | + | chr5.4:73960814-73960833 | MS.gene020669:intron | 45.0% | |
| AGTGTCCCTGAGATCAAATC+TGG | + | chr5.4:73961736-73961755 | MS.gene020669:CDS | 45.0% | |
| ATCAGTCAGCACACCATCAA+CGG | - | chr5.4:73960336-73960355 | None:intergenic | 45.0% | |
| ATTGAGGCTGCAGGGAAAAT+AGG | - | chr5.4:73962156-73962175 | None:intergenic | 45.0% | |
| ATTTGTAGGGGATGGGATCA+TGG | - | chr5.4:73960663-73960682 | None:intergenic | 45.0% | |
| CAAGCTCTCGAATTCATGGA+GGG | + | chr5.4:73962616-73962635 | MS.gene020669:intron | 45.0% | |
| CCCAAGAAATTCGAGAGTCT+TGG | - | chr5.4:73962649-73962668 | None:intergenic | 45.0% | |
| CCGTCCTTTGACAATTGAAC+AGG | - | chr5.4:73961637-73961656 | None:intergenic | 45.0% | |
| CGCCGTTATCAATGAATTGG+AGG | - | chr5.4:73960307-73960326 | None:intergenic | 45.0% | |
| CTGCCCTGTTCAATTGTCAA+AGG | + | chr5.4:73961630-73961649 | MS.gene020669:CDS | 45.0% | |
| CTGGTAGACAAGCTCGTATT+TGG | - | chr5.4:73963300-73963319 | None:intergenic | 45.0% | |
| GCAAAAATGCAGAAGGTCGT+GGG | - | chr5.4:73960976-73960995 | None:intergenic | 45.0% | |
| GCAGATTGCTTTGCTCACAT+AGG | + | chr5.4:73961340-73961359 | MS.gene020669:intron | 45.0% | |
| GCAGGCCTTTCAAAGTAACA+AGG | - | chr5.4:73962792-73962811 | None:intergenic | 45.0% | |
| GCCTATCTTGCAGAAAAGCA+GGG | + | chr5.4:73963152-73963171 | MS.gene020669:CDS | 45.0% | |
| GGCAACAATGCTACAAGAAG+AGG | + | chr5.4:73961361-73961380 | MS.gene020669:CDS | 45.0% | |
| GGCATGAAAAACCAAGAGGA+CGG | - | chr5.4:73961116-73961135 | None:intergenic | 45.0% | |
| GGGTTACCACCATGCAAATA+TGG | - | chr5.4:73961873-73961892 | None:intergenic | 45.0% | |
| GGTTGAACAGGTTGCATGTA+GGG | - | chr5.4:73964150-73964169 | None:intergenic | 45.0% | |
| GTTAATGGTGTACCCACAAG+TGG | + | chr5.4:73959430-73959449 | MS.gene020669:CDS | 45.0% | |
| TACAGGCCATATGTATCCCT+TGG | - | chr5.4:73960147-73960166 | None:intergenic | 45.0% | |
| TACATGCAACCTGTTCAACC+AGG | + | chr5.4:73964150-73964169 | MS.gene020669:CDS | 45.0% | |
| TACTATTGAGGGTGATGTGC+TGG | + | chr5.4:73963683-73963702 | MS.gene020669:intron | 45.0% | |
| TATATCCTCAGCAGCAGCAT+TGG | - | chr5.4:73963348-73963367 | None:intergenic | 45.0% | |
| TCTGTATGGAACACACTCAC+AGG | + | chr5.4:73958722-73958741 | MS.gene020669:CDS | 45.0% | |
| TGAGAAAGGGGCCAATATTG+AGG | - | chr5.4:73962172-73962191 | None:intergenic | 45.0% | |
| TGGTTGAACAGGTTGCATGT+AGG | - | chr5.4:73964151-73964170 | None:intergenic | 45.0% | |
| TTGAGGCTGCAGGGAAAATA+GGG | - | chr5.4:73962155-73962174 | None:intergenic | 45.0% | |
| TTGCACATCACACCATAGAG+CGG | - | chr5.4:73959311-73959330 | None:intergenic | 45.0% | |
| TTTCCCTGCAGCCTCAATAT+TGG | + | chr5.4:73962158-73962177 | MS.gene020669:intron | 45.0% | |
| TTTGTAGGGGATGGGATCAT+GGG | - | chr5.4:73960662-73960681 | None:intergenic | 45.0% | |
| ! | CAAAAAGGTGTGTGAGAGGA+AGG | + | chr5.4:73963819-73963838 | MS.gene020669:intron | 45.0% |
| ! | CCAACAAAAAGGTGTGTGAG+AGG | + | chr5.4:73963815-73963834 | MS.gene020669:intron | 45.0% |
| ! | CCTCTCACACACCTTTTTGT+TGG | - | chr5.4:73963818-73963837 | None:intergenic | 45.0% |
| ! | GAAGCTAGTTTGAGCAACTG+TGG | - | chr5.4:73961701-73961720 | None:intergenic | 45.0% |
| ! | TACCAGATTGACGAGAGTGT+CGG | + | chr5.4:73963314-73963333 | MS.gene020669:CDS | 45.0% |
| ! | TCTGAGACCAAAGAGGTATG+TGG | - | chr5.4:73960191-73960210 | None:intergenic | 45.0% |
| !! | AGAAGGTGCCTAGTCTAAGA+TGG | - | chr5.4:73961001-73961020 | None:intergenic | 45.0% |
| !! | GTCCCATCGTTCTTAGCTTT+TGG | - | chr5.4:73962216-73962235 | None:intergenic | 45.0% |
| !! | TCCCTGCTTTTCTGCAAGAT+AGG | - | chr5.4:73963156-73963175 | None:intergenic | 45.0% |
| !!! | GCTGGAGCTATTTTAGCAAC+CGG | - | chr5.4:73964273-73964292 | None:intergenic | 45.0% |
| AACCTTACGCTGTGCGTTTC+CGG | - | chr5.4:73964328-73964347 | None:intergenic | 50.0% | |
| ACTAGGCACCTTCTCTAGAC+AGG | + | chr5.4:73961007-73961026 | MS.gene020669:intron | 50.0% | |
| AGTAGGTCACCCCTTCTTGA+TGG | + | chr5.4:73959692-73959711 | MS.gene020669:CDS | 50.0% | |
| ATCACACCATAGAGCGGCAT+TGG | - | chr5.4:73959305-73959324 | None:intergenic | 50.0% | |
| ATCCCCTACCTGTCTAGAGA+AGG | - | chr5.4:73961018-73961037 | None:intergenic | 50.0% | |
| CAAGGCCATACAAGATGGTG+TGG | + | chr5.4:73961597-73961616 | MS.gene020669:CDS | 50.0% | |
| CACCTTCTCTAGACAGGTAG+GGG | + | chr5.4:73961013-73961032 | MS.gene020669:intron | 50.0% | |
| CACGGCCAGATTTGATCTCA+GGG | - | chr5.4:73961744-73961763 | None:intergenic | 50.0% | |
| CCAAGCTCTCGAATTCATGG+AGG | + | chr5.4:73962615-73962634 | MS.gene020669:intron | 50.0% | |
| CCACAAACCTGGTGTTTGTG+GGG | - | chr5.4:73959765-73959784 | None:intergenic | 50.0% | |
| CCTCCATGAATTCGAGAGCT+TGG | - | chr5.4:73962618-73962637 | None:intergenic | 50.0% | |
| CGGGGATTGGGATAAAGGAT+AGG | + | chr5.4:73962582-73962601 | MS.gene020669:intron | 50.0% | |
| CTTCTCAGAAAACCAGCCTC+AGG | - | chr5.4:73959975-73959994 | None:intergenic | 50.0% | |
| GCACCTTCTCTAGACAGGTA+GGG | + | chr5.4:73961012-73961031 | MS.gene020669:intron | 50.0% | |
| GCATTCGGGGATTGGGATAA+AGG | + | chr5.4:73962577-73962596 | MS.gene020669:intron | 50.0% | |
| GGTACTTGTTCTTGCCATGC+GGG | + | chr5.4:73960815-73960834 | MS.gene020669:intron | 50.0% | |
| GTGTGTGCACCATCAGCATT+AGG | - | chr5.4:73960918-73960937 | None:intergenic | 50.0% | |
| TACGTCATTGCCTCCAGCTA+TGG | + | chr5.4:73964197-73964216 | MS.gene020669:CDS | 50.0% | |
| TATTGAGGGTGATGTGCTGG+TGG | + | chr5.4:73963686-73963705 | MS.gene020669:intron | 50.0% | |
| TCACACCATAGAGCGGCATT+GGG | - | chr5.4:73959304-73959323 | None:intergenic | 50.0% | |
| TCTTTAGTCAAGGGAGGGAG+TGG | - | chr5.4:73964225-73964244 | None:intergenic | 50.0% | |
| TGAACAGGTTGCATGTAGGG+AGG | - | chr5.4:73964147-73964166 | None:intergenic | 50.0% | |
| TGTGAGAGGAAGGAGTAGGT+AGG | + | chr5.4:73963829-73963848 | MS.gene020669:intron | 50.0% | |
| TTAGCAACCGGAGGCAAAGA+TGG | - | chr5.4:73964261-73964280 | None:intergenic | 50.0% | |
| ! | ATTGAGGGTGATGTGCTGGT+GGG | + | chr5.4:73963687-73963706 | MS.gene020669:intron | 50.0% |
| ! | CACTGAGGAGCTTTTGGTCT+GGG | + | chr5.4:73963895-73963914 | MS.gene020669:intron | 50.0% |
| ! | TCACTGAGGAGCTTTTGGTC+TGG | + | chr5.4:73963894-73963913 | MS.gene020669:intron | 50.0% |
| ! | TTTTGCAGGAAGTCCACCAC+TGG | + | chr5.4:73959198-73959217 | MS.gene020669:intron | 50.0% |
| !! | ATTGGGTGTGCTGGTTTGTG+CGG | - | chr5.4:73959287-73959306 | None:intergenic | 50.0% |
| !!! | GGAGCTATTTTAGCAACCGG+AGG | - | chr5.4:73964270-73964289 | None:intergenic | 50.0% |
| AACGGCGAGTTCACCGTTGA+TGG | + | chr5.4:73960320-73960339 | MS.gene020669:CDS | 55.0% | |
| ACCTTACGCTGTGCGTTTCC+GGG | - | chr5.4:73964327-73964346 | None:intergenic | 55.0% | |
| CACCGACACTCTCGTCAATC+TGG | - | chr5.4:73963319-73963338 | None:intergenic | 55.0% | |
| CCACCACTGGTCATCTCACA+TGG | + | chr5.4:73959211-73959230 | MS.gene020669:CDS | 55.0% | |
| CCACCATGTGAGATGACCAG+TGG | - | chr5.4:73959217-73959236 | None:intergenic | 55.0% | |
| CCACGGCCAGATTTGATCTC+AGG | - | chr5.4:73961745-73961764 | None:intergenic | 55.0% | |
| CCACTGGTCATCTCACATGG+TGG | + | chr5.4:73959214-73959233 | MS.gene020669:CDS | 55.0% | |
| CCATGTGAGATGACCAGTGG+TGG | - | chr5.4:73959214-73959233 | None:intergenic | 55.0% | |
| CCCCACAAACACCAGGTTTG+TGG | + | chr5.4:73959762-73959781 | MS.gene020669:CDS | 55.0% | |
| CCTGAGATCAAATCTGGCCG+TGG | + | chr5.4:73961742-73961761 | MS.gene020669:CDS | 55.0% | |
| CTCTAGACAGGTAGGGGATC+TGG | + | chr5.4:73961019-73961038 | MS.gene020669:intron | 55.0% | |
| GAGAGCCTATCCAGTGTCAC+TGG | + | chr5.4:73959478-73959497 | MS.gene020669:CDS | 55.0% | |
| GGCACCTTCTCTAGACAGGT+AGG | + | chr5.4:73961011-73961030 | MS.gene020669:intron | 55.0% | |
| GGGCCAATATTGAGGCTGCA+GGG | - | chr5.4:73962164-73962183 | None:intergenic | 55.0% | |
| GGTAGAGCCATCTTTGCCTC+CGG | + | chr5.4:73964251-73964270 | MS.gene020669:CDS | 55.0% | |
| GGTCTCAGACGCGCATAAAG+CGG | + | chr5.4:73960202-73960221 | MS.gene020669:CDS | 55.0% | |
| GGTGTGTGAGAGGAAGGAGT+AGG | + | chr5.4:73963825-73963844 | MS.gene020669:intron | 55.0% | |
| GTCTCAGACGCGCATAAAGC+GGG | + | chr5.4:73960203-73960222 | MS.gene020669:CDS | 55.0% | |
| TCTCAGACGCGCATAAAGCG+GGG | + | chr5.4:73960204-73960223 | MS.gene020669:CDS | 55.0% | |
| TGCAGAAGGTCGTGGGTGTT+TGG | - | chr5.4:73960969-73960988 | None:intergenic | 55.0% | |
| TGCTACCAATGCTGCTGCTG+AGG | + | chr5.4:73963340-73963359 | MS.gene020669:CDS | 55.0% | |
| TTAGTGGCCCCACAAACACC+AGG | + | chr5.4:73959755-73959774 | MS.gene020669:CDS | 55.0% | |
| TTCTGGATCATGCAGGGTGC+AGG | - | chr5.4:73962810-73962829 | None:intergenic | 55.0% | |
| ! | ATGCGCGTCTGAGACCAAAG+AGG | - | chr5.4:73960198-73960217 | None:intergenic | 55.0% |
| !! | AGTTTGTAGGAGCACCCGCA+TGG | - | chr5.4:73960832-73960851 | None:intergenic | 55.0% |
| !! | GGGAAATGTGAGTGCTGAGC+TGG | + | chr5.4:73963773-73963792 | MS.gene020669:intron | 55.0% |
| ACCCGGAAACGCACAGCGTA+AGG | + | chr5.4:73964323-73964342 | MS.gene020669:CDS | 60.0% | |
| GCACACCCAATGCCGCTCTA+TGG | + | chr5.4:73959296-73959315 | MS.gene020669:CDS | 60.0% | |
| GGGGCCAATATTGAGGCTGC+AGG | - | chr5.4:73962165-73962184 | None:intergenic | 60.0% | |
| TACGCTGTGCGTTTCCGGGT+GGG | - | chr5.4:73964323-73964342 | None:intergenic | 60.0% | |
| TTACGCTGTGCGTTTCCGGG+TGG | - | chr5.4:73964324-73964343 | None:intergenic | 60.0% | |
| ! | AGTGAAACGGAGAGAGCGCG+TGG | - | chr5.4:73958656-73958675 | None:intergenic | 60.0% |
| ! | TAGAGCGGCATTGGGTGTGC+TGG | - | chr5.4:73959296-73959315 | None:intergenic | 60.0% |
| ACGCTGTGCGTTTCCGGGTG+GGG | - | chr5.4:73964322-73964341 | None:intergenic | 65.0% | |
| AGACGCGCATAAAGCGGGGC+TGG | + | chr5.4:73960208-73960227 | MS.gene020669:CDS | 65.0% | |
| CCAGCTGTTAGCCCTGCTGC+CGG | + | chr5.4:73964288-73964307 | MS.gene020669:CDS | 65.0% | |
| GGAGGGAGTGGAGCCATAGC+TGG | - | chr5.4:73964213-73964232 | None:intergenic | 65.0% | |
| GGGAGTGGAGCCATAGCTGG+AGG | - | chr5.4:73964210-73964229 | None:intergenic | 65.0% | |
| TGCGTTTCCGGGTGGGGACT+TGG | - | chr5.4:73964316-73964335 | None:intergenic | 65.0% | |
| ! | GGGACTTGGTTCCGGCAGCA+GGG | - | chr5.4:73964302-73964321 | None:intergenic | 65.0% |
| ! | TCCGGGTGGGGACTTGGTTC+CGG | - | chr5.4:73964310-73964329 | None:intergenic | 65.0% |
| CCGGCAGCAGGGCTAACAGC+TGG | - | chr5.4:73964291-73964310 | None:intergenic | 70.0% | |
| GCCGGAACCAAGTCCCCACC+CGG | + | chr5.4:73964306-73964325 | MS.gene020669:CDS | 70.0% | |
| ! | GGGGACTTGGTTCCGGCAGC+AGG | - | chr5.4:73964303-73964322 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 73958644 | 73964407 | 73958644 | ID=MS.gene020669 |
| chr5.4 | mRNA | 73958644 | 73964407 | 73958644 | ID=MS.gene020669.t1;Parent=MS.gene020669 |
| chr5.4 | exon | 73958644 | 73958743 | 73958644 | ID=MS.gene020669.t1.exon1;Parent=MS.gene020669.t1 |
| chr5.4 | CDS | 73958644 | 73958743 | 73958644 | ID=cds.MS.gene020669.t1;Parent=MS.gene020669.t1 |
| chr5.4 | exon | 73959206 | 73959499 | 73959206 | ID=MS.gene020669.t1.exon2;Parent=MS.gene020669.t1 |
| chr5.4 | CDS | 73959206 | 73959499 | 73959206 | ID=cds.MS.gene020669.t1;Parent=MS.gene020669.t1 |
| chr5.4 | exon | 73959675 | 73959796 | 73959675 | ID=MS.gene020669.t1.exon3;Parent=MS.gene020669.t1 |
| chr5.4 | CDS | 73959675 | 73959796 | 73959675 | ID=cds.MS.gene020669.t1;Parent=MS.gene020669.t1 |
| chr5.4 | exon | 73959882 | 73960383 | 73959882 | ID=MS.gene020669.t1.exon4;Parent=MS.gene020669.t1 |
| chr5.4 | CDS | 73959882 | 73960383 | 73959882 | ID=cds.MS.gene020669.t1;Parent=MS.gene020669.t1 |
| chr5.4 | exon | 73961344 | 73961382 | 73961344 | ID=MS.gene020669.t1.exon5;Parent=MS.gene020669.t1 |
| chr5.4 | CDS | 73961344 | 73961382 | 73961344 | ID=cds.MS.gene020669.t1;Parent=MS.gene020669.t1 |
| chr5.4 | exon | 73961527 | 73961811 | 73961527 | ID=MS.gene020669.t1.exon6;Parent=MS.gene020669.t1 |
| chr5.4 | CDS | 73961527 | 73961811 | 73961527 | ID=cds.MS.gene020669.t1;Parent=MS.gene020669.t1 |
| chr5.4 | exon | 73962169 | 73962311 | 73962169 | ID=MS.gene020669.t1.exon7;Parent=MS.gene020669.t1 |
| chr5.4 | CDS | 73962169 | 73962311 | 73962169 | ID=cds.MS.gene020669.t1;Parent=MS.gene020669.t1 |
| chr5.4 | exon | 73963146 | 73963629 | 73963146 | ID=MS.gene020669.t1.exon8;Parent=MS.gene020669.t1 |
| chr5.4 | CDS | 73963146 | 73963629 | 73963146 | ID=cds.MS.gene020669.t1;Parent=MS.gene020669.t1 |
| chr5.4 | exon | 73964112 | 73964407 | 73964112 | ID=MS.gene020669.t1.exon9;Parent=MS.gene020669.t1 |
| chr5.4 | CDS | 73964112 | 73964407 | 73964112 | ID=cds.MS.gene020669.t1;Parent=MS.gene020669.t1 |
| Gene Sequence |
| Protein sequence |
